Moc03g04650 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc03g04650
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr3: 3494950 .. 3495914 (+)
RNA-Seq ExpressionMoc03g04650
SyntenyMoc03g04650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTCCCCTAATCATGCCTCGAACTTGTTTTTATTGCTTGGAAACTTAGCAACAGAAGTTATGGGTATCCATGTTCGGGTGTCTCGAAAGGGAACCAAGTCGAGTTGGGCATTAATAAATATTTGTAAGCTAAAAGGTAGGTTAAGAAGTCTGTGAAAACATGTTGAATCTCCCACACTTTTCCATATCTGTTACCCCTTATTTTTGCTGTTCTGTGCTGTAACTTCTTTATGTTATCAGCTTTTCGAAATGTGTCTACTACTGATATTTGTTTACTGCTCTGTTTGTTATATTTTTTTTAGTTACGACACAACACTTATATTTCATTGTTTTTACACATTTAGTATCTACAAACATCGTTTAAAATATTATCCAAAGTTCCTGTGGATTCGACCTCGTTTCGTACTACAATCGGCAATTTCGTGTATACTTGCACGTCTTGTCAGCAAGGTTGTGTGGACGCAACAAGTTTTTGGCACCGTTACGGGGAACTTATTGATTTTATTCTAAACAATAGTGTTTGTAGATACGGTGCTTAATCGAGTTTTCTTTTCCTGACATTTTTGTGTGGTTATAGGTGTATAAATGATTTTGAGAGCTTGGAATATATTTTAGATCACGAGATACAACACACATTTCATAAGAATCGACGAGAACAACAGAGAGTCCAAGTTGAAGCAAACATGAATCCACCTAACCCAAATTTACGCCAGCCTATTCCACCGAATGTGAGGATTGAGGAAATAGTAGATGAGGTTCCTGTTGCTACCAACCATGAGGTAGCAGTGCCCCCTTTCAATGCTGTATTACTAGCAGATGACATCGATAGAGAAATCAGGGCGTATGCAGCTCTAGCATTTTATAATTTTAACCTAGTAATCATAGAGCCAGAAATTGCAGCACCAAAATTTAAGCTTGGCCAGTTTTCAATAATGGCCAACAAAGATCTCTACTTTTTTTAG

mRNA sequence

ATGAGGTCCCCTAATCATGCCTCGAACTTGTTTTTATTGCTTGGAAACTTAGCAACAGAAGTTATGGGTATCCATGTTCGGGTGTCTCGAAAGGGAACCAAGTGTATAAATGATTTTGAGAGCTTGGAATATATTTTAGATCACGAGATACAACACACATTTCATAAGAATCGACGAGAACAACAGAGAGTCCAAGTTGAAGCAAACATGAATCCACCTAACCCAAATTTACGCCAGCCTATTCCACCGAATGTGAGGATTGAGGAAATAGTAGATGAGGTTCCTGTTGCTACCAACCATGAGGTAGCAGTGCCCCCTTTCAATGCTGTATTACTAGCAGATGACATCGATAGAGAAATCAGGGCGTATGCAGCTCTAGCATTTTATAATTTTAACCTAGTAATCATAGAGCCAGAAATTGCAGCACCAAAATTTAAGCTTGGCCAGTTTTCAATAATGGCCAACAAAGATCTCTACTTTTTTTAG

Coding sequence (CDS)

ATGAGGTCCCCTAATCATGCCTCGAACTTGTTTTTATTGCTTGGAAACTTAGCAACAGAAGTTATGGGTATCCATGTTCGGGTGTCTCGAAAGGGAACCAAGTGTATAAATGATTTTGAGAGCTTGGAATATATTTTAGATCACGAGATACAACACACATTTCATAAGAATCGACGAGAACAACAGAGAGTCCAAGTTGAAGCAAACATGAATCCACCTAACCCAAATTTACGCCAGCCTATTCCACCGAATGTGAGGATTGAGGAAATAGTAGATGAGGTTCCTGTTGCTACCAACCATGAGGTAGCAGTGCCCCCTTTCAATGCTGTATTACTAGCAGATGACATCGATAGAGAAATCAGGGCGTATGCAGCTCTAGCATTTTATAATTTTAACCTAGTAATCATAGAGCCAGAAATTGCAGCACCAAAATTTAAGCTTGGCCAGTTTTCAATAATGGCCAACAAAGATCTCTACTTTTTTTAG

Protein sequence

MRSPNHASNLFLLLGNLATEVMGIHVRVSRKGTKCINDFESLEYILDHEIQHTFHKNRREQQRVQVEANMNPPNPNLRQPIPPNVRIEEIVDEVPVATNHEVAVPPFNAVLLADDIDREIRAYAALAFYNFNLVIIEPEIAAPKFKLGQFSIMANKDLYFF
Homology
[Close]
BLAST of Moc03g04650 vs. NCBI nr
Match: XP_022150863.1 (uncharacterized protein LOC111018910 [Momordica charantia])

HSP 1 Score: 122.1 bits (305), Expect = 4.4e-24
Identity = 63/78 (80.77%), Postives = 64/78 (82.05%), Query Frame = 0 

Query: 70  MNPPNPNLRQPIPPNVRIEEIVDEVPVATNHEVAVPPFNAVLLADDIDREIRAYAALAFY 129
           MNPPNPNL QPIPPNVRIEEIVD VPVATNHEV VP  N VLLA  IDREIRAYAA  FY
Sbjct: 1   MNPPNPNLHQPIPPNVRIEEIVDGVPVATNHEVIVPSLNVVLLAKAIDREIRAYAAPTFY 60

Query: 130 NFNLVIIEPEIAAPKFKL 148
           NFN VI E EI APKF+L
Sbjct: 61  NFNPVITEREITAPKFEL 78

[Close]
BLAST of Moc03g04650 vs. NCBI nr
Match: XP_022153147.1 (probable serine/threonine-protein kinase PBL11 [Momordica charantia])

HSP 1 Score: 77.8 bits (190), Expect = 9.5e-11
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0 

Query: 36  INDFESLEYILDHEIQHTFHKNRREQQRVQVEANMNPPNPNLRQPIPPNVRIEEIVDEVP 95
           ++D + LEY+LD+EI+ TF +  REQ+R QVE N     P L     PN  +E +V    
Sbjct: 1   MHDLQRLEYLLDNEIECTFPRRIREQRRQQVETNPMDQLPRL-----PNPMVEVVV---- 60

Query: 96  VATNHEVAVPPFNAVLLADDIDREIRAYAALAFYNFNLVIIEPEIAAPKFKL 148
                  A P  N +LLADD +R IRAYAAL  ++F+ VI  PEI A +F+L
Sbjct: 61  -----PAAAPTLNTILLADDGERAIRAYAALVLHSFHPVIAGPEIEAERFEL 98

[Close]
BLAST of Moc03g04650 vs. NCBI nr
Match: XP_022158768.1 (uncharacterized protein LOC111025234 [Momordica charantia])

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-08
Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 0 

Query: 71  NPPNPNLRQPIPPNVRIEEIVDEVPVATNHEVAVPPFNAVLLADDIDREIRAYAALAFYN 130
           +PPNP    PI P +++E +  +  VA  H +  PP NA+LL DDI++EIRAYAA AF++
Sbjct: 3   HPPNP----PIQPKLKVERVQGD--VAGGHAL-TPPLNAILLGDDIEQEIRAYAAPAFFD 62

Query: 131 FNLVIIEPEIAAPKFKL 148
           FN VI++P I A +F+L
Sbjct: 63  FNPVIVDPIIEADRFEL 72

[Close]
BLAST of Moc03g04650 vs. ExPASy TrEMBL
Match: A0A6J1DAK9 (uncharacterized protein LOC111018910 OS=Momordica charantia OX=3673 GN=LOC111018910 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.1e-24
Identity = 63/78 (80.77%), Postives = 64/78 (82.05%), Query Frame = 0 

Query: 70  MNPPNPNLRQPIPPNVRIEEIVDEVPVATNHEVAVPPFNAVLLADDIDREIRAYAALAFY 129
           MNPPNPNL QPIPPNVRIEEIVD VPVATNHEV VP  N VLLA  IDREIRAYAA  FY
Sbjct: 1   MNPPNPNLHQPIPPNVRIEEIVDGVPVATNHEVIVPSLNVVLLAKAIDREIRAYAAPTFY 60

Query: 130 NFNLVIIEPEIAAPKFKL 148
           NFN VI E EI APKF+L
Sbjct: 61  NFNPVITEREITAPKFEL 78

[Close]
BLAST of Moc03g04650 vs. ExPASy TrEMBL
Match: A0A6J1DI54 (probable serine/threonine-protein kinase PBL11 OS=Momordica charantia OX=3673 GN=LOC111020716 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.6e-11
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0 

Query: 36  INDFESLEYILDHEIQHTFHKNRREQQRVQVEANMNPPNPNLRQPIPPNVRIEEIVDEVP 95
           ++D + LEY+LD+EI+ TF +  REQ+R QVE N     P L     PN  +E +V    
Sbjct: 1   MHDLQRLEYLLDNEIECTFPRRIREQRRQQVETNPMDQLPRL-----PNPMVEVVV---- 60

Query: 96  VATNHEVAVPPFNAVLLADDIDREIRAYAALAFYNFNLVIIEPEIAAPKFKL 148
                  A P  N +LLADD +R IRAYAAL  ++F+ VI  PEI A +F+L
Sbjct: 61  -----PAAAPTLNTILLADDGERAIRAYAALVLHSFHPVIAGPEIEAERFEL 98

[Close]
BLAST of Moc03g04650 vs. ExPASy TrEMBL
Match: A0A6J1DX14 (uncharacterized protein LOC111025234 OS=Momordica charantia OX=3673 GN=LOC111025234 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-08
Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 0 

Query: 71  NPPNPNLRQPIPPNVRIEEIVDEVPVATNHEVAVPPFNAVLLADDIDREIRAYAALAFYN 130
           +PPNP    PI P +++E +  +  VA  H +  PP NA+LL DDI++EIRAYAA AF++
Sbjct: 3   HPPNP----PIQPKLKVERVQGD--VAGGHAL-TPPLNAILLGDDIEQEIRAYAAPAFFD 62

Query: 131 FNLVIIEPEIAAPKFKL 148
           FN VI++P I A +F+L
Sbjct: 63  FNPVIVDPIIEADRFEL 72

The following BLAST results are available for this feature:
BLAST of Moc03g04650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022150863.14.4e-2480.77uncharacterized protein LOC111018910 [Momordica charantia][more]
XP_022153147.19.5e-1143.75probable serine/threonine-protein kinase PBL11 [Momordica charantia][more]
XP_022158768.12.6e-0849.35uncharacterized protein LOC111025234 [Momordica charantia][more]
BLAST of Moc03g04650 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc03g04650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DAK92.1e-2480.77uncharacterized protein LOC111018910 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1DI544.6e-1143.75probable serine/threonine-protein kinase PBL11 OS=Momordica charantia OX=3673 GN... [more]
A0A6J1DX141.3e-0849.35uncharacterized protein LOC111025234 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of Moc03g04650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc03g04650.1Moc03g04650.1mRNA