Moc03g03100 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc03g03100
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr3: 2372076 .. 2372330 (+)
RNA-Seq ExpressionMoc03g03100
SyntenyMoc03g03100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCAATCAGCAAACTCAACCAACACTGCAGACCGAAGAGCTTTGGCTGCCAATGATGGTCACCAGAGGGAGGTCGGAGTAGAAGTGGCAGAGGGCCAGATTCATGAAGGCCTTGGGGCTGAGCCGCTCCGTAGGTCGGCACGCATCACCATGCTCGTTCTACCACCGGCACATCCAAAATCGTCCAAGGCCAATCGCGGCCGAGGTGGTGCCTCGAGGAGCAGCCCCAGCTCCTACCAGGGAGAATTTTGA

mRNA sequence

ATGGTTCAATCAGCAAACTCAACCAACACTGCAGACCGAAGAGCTTTGGCTGCCAATGATGGTCACCAGAGGGAGGTCGGAGTAGAAGTGGCAGAGGGCCAGATTCATGAAGGCCTTGGGGCTGAGCCGCTCCGTAGGTCGGCACGCATCACCATGCTCGTTCTACCACCGGCACATCCAAAATCGTCCAAGGCCAATCGCGGCCGAGGTGGTGCCTCGAGGAGCAGCCCCAGCTCCTACCAGGGAGAATTTTGA

Coding sequence (CDS)

ATGGTTCAATCAGCAAACTCAACCAACACTGCAGACCGAAGAGCTTTGGCTGCCAATGATGGTCACCAGAGGGAGGTCGGAGTAGAAGTGGCAGAGGGCCAGATTCATGAAGGCCTTGGGGCTGAGCCGCTCCGTAGGTCGGCACGCATCACCATGCTCGTTCTACCACCGGCACATCCAAAATCGTCCAAGGCCAATCGCGGCCGAGGTGGTGCCTCGAGGAGCAGCCCCAGCTCCTACCAGGGAGAATTTTGA

Protein sequence

MVQSANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGAEPLRRSARITMLVLPPAHPKSSKANRGRGGASRSSPSSYQGEF
Homology
BLAST of Moc03g03100 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 110.5 bits (275), Expect = 6.9e-21
Identity = 58/74 (78.38%), Postives = 59/74 (79.73%), Query Frame = 0

Query: 1  MVQSANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGAEPLRRSARITMLVLPPAHP 60
          MVQ  +STNT DRRAL ANDGHQREVG EV EGQIHEGLG EP  RSARIT   L PAHP
Sbjct: 1  MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61 KSSKANRGRGGASR 75
          K  KANRGRGGASR
Sbjct: 61 KPFKANRGRGGASR 74

BLAST of Moc03g03100 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 101.7 bits (252), Expect = 3.2e-18
Identity = 54/65 (83.08%), Postives = 54/65 (83.08%), Query Frame = 0

Query: 1  MVQSANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGAEPLRRSARITMLVLPPAHP 60
          MVQ ANSTNTADRRALAAN GHQREVG EV EGQ HE LG EPL RSARIT  VLPPAHP
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61 KSSKA 66
          K SKA
Sbjct: 61 KPSKA 65

BLAST of Moc03g03100 vs. NCBI nr
Match: XP_022156638.1 (uncharacterized protein LOC111023488 [Momordica charantia])

HSP 1 Score: 71.2 bits (173), Expect = 4.7e-09
Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 0

Query: 1  MVQSANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGAEPLRRSARITMLVLPPAHP 60
          MVQ   S NTA+RRAL  N+  Q E+  +V E Q   G   +P RRS R    +LPPAHP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 KSSKANRGRGGASRSSP 78
          +S KANRGRGG +   P
Sbjct: 61 RSGKANRGRGGGTDDLP 77

BLAST of Moc03g03100 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.4e-21
Identity = 58/74 (78.38%), Postives = 59/74 (79.73%), Query Frame = 0

Query: 1  MVQSANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGAEPLRRSARITMLVLPPAHP 60
          MVQ  +STNT DRRAL ANDGHQREVG EV EGQIHEGLG EP  RSARIT   L PAHP
Sbjct: 1  MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61 KSSKANRGRGGASR 75
          K  KANRGRGGASR
Sbjct: 61 KPFKANRGRGGASR 74

BLAST of Moc03g03100 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-18
Identity = 54/65 (83.08%), Postives = 54/65 (83.08%), Query Frame = 0

Query: 1  MVQSANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGAEPLRRSARITMLVLPPAHP 60
          MVQ ANSTNTADRRALAAN GHQREVG EV EGQ HE LG EPL RSARIT  VLPPAHP
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61 KSSKA 66
          K SKA
Sbjct: 61 KPSKA 65

BLAST of Moc03g03100 vs. ExPASy TrEMBL
Match: A0A6J1DR60 (uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023488 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.3e-09
Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 0

Query: 1  MVQSANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGAEPLRRSARITMLVLPPAHP 60
          MVQ   S NTA+RRAL  N+  Q E+  +V E Q   G   +P RRS R    +LPPAHP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 KSSKANRGRGGASRSSP 78
          +S KANRGRGG +   P
Sbjct: 61 RSGKANRGRGGGTDDLP 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022159327.16.9e-2178.38uncharacterized protein LOC111025738 [Momordica charantia][more]
XP_022152854.13.2e-1883.08uncharacterized protein LOC111020479 [Momordica charantia][more]
XP_022156638.14.7e-0950.65uncharacterized protein LOC111023488 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DZJ13.4e-2178.38uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DHB31.6e-1883.08uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DR602.3e-0950.65uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc03g03100.1Moc03g03100.1mRNA