Moc03g03050 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc03g03050
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr3: 2316681 .. 2317174 (-)
RNA-Seq ExpressionMoc03g03050
SyntenyMoc03g03050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGGATTGATTTTCGAAGTGCTATATATAGCTTTTTGGATTCAGATCCGTTTTCACGTTCTCTGAAAAACTTGAATTCGACCTATGCAGCTCAGAGCTTCACCCTAGGTCAGCCCCTTCCTTTTTGTTTTCTTTTTGTTTAAATTTCGTAGTCATGTCTAGCTCTTCTAGCAGTAGTTAATCTAATAGTTCAGGTCGGAACCTTAGCACCTCATCCCCTAGGAGAGTAGACACTAGTGAGGACTTAGTGAATAGGCTAGATGTCGAGCTGGAGGAAATAGAAAACTTCAGGTTCTCAAAGGATGAAGGTAGTGATAGTGATGCTTCCACCTCGAGCCAGGGACTTGAGTACCTCTCCCAAATGCTCGAGAATTACTTGGTCCTCTTTCATAGATGCTATAGTATCCCAGACTCAATAGGTCTACATCTTCCGGTTGAAAGAGAAAGAGCTGACAAACTTCTAGAGGGGTACGTCATGTTGTACCTTTAA

mRNA sequence

ATGGCTAGGATTGATTTTCGAAGTGCTATATATAGCTTTTTGGATTCAGATCCGTTTTCACGTTCTCTGAAAAACTTGAATTCGACCTATGCAGCTCAGAGCTTCACCCTAGGTCGGAACCTTAGCACCTCATCCCCTAGGAGAGTAGACACTAGTGAGGACTTAGTGAATAGGCTAGATGTCGAGCTGGAGGAAATAGAAAACTTCAGGTTCTCAAAGGATGAAGGTAGTGATAGTGATGCTTCCACCTCGAGCCAGGGACTTGAGTACCTCTCCCAAATGCTCGAGAATTACTTGGTCCTCTTTCATAGATGCTATAGTATCCCAGACTCAATAGGTCTACATCTTCCGGTTGAAAGAGAAAGAGCTGACAAACTTCTAGAGGGGTACGTCATGTTGTACCTTTAA

Coding sequence (CDS)

ATGGCTAGGATTGATTTTCGAAGTGCTATATATAGCTTTTTGGATTCAGATCCGTTTTCACGTTCTCTGAAAAACTTGAATTCGACCTATGCAGCTCAGAGCTTCACCCTAGGTCGGAACCTTAGCACCTCATCCCCTAGGAGAGTAGACACTAGTGAGGACTTAGTGAATAGGCTAGATGTCGAGCTGGAGGAAATAGAAAACTTCAGGTTCTCAAAGGATGAAGGTAGTGATAGTGATGCTTCCACCTCGAGCCAGGGACTTGAGTACCTCTCCCAAATGCTCGAGAATTACTTGGTCCTCTTTCATAGATGCTATAGTATCCCAGACTCAATAGGTCTACATCTTCCGGTTGAAAGAGAAAGAGCTGACAAACTTCTAGAGGGGTACGTCATGTTGTACCTTTAA

Protein sequence

MARIDFRSAIYSFLDSDPFSRSLKNLNSTYAAQSFTLGRNLSTSSPRRVDTSEDLVNRLDVELEEIENFRFSKDEGSDSDASTSSQGLEYLSQMLENYLVLFHRCYSIPDSIGLHLPVERERADKLLEGYVMLYL
Homology
[Close]
BLAST of Moc03g03050 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-12
Identity = 49/91 (53.85%), Postives = 61/91 (67.03%), Query Frame = 0 

Query: 44  SSPRRVDTSEDLVNRLDVELEEIENFRFSKDEGSDSDASTSSQGLEYLSQMLENYLVLFH 103
           SS    +   DL  RL+ +LEEIEN R S D+G DSDASTS QGLEY S++ E+YL    
Sbjct: 2   SSSISSNLESDLARRLESKLEEIENXRIS-DDGEDSDASTSGQGLEYPSRIPEHYLGSLR 61

Query: 104 RCYSIPDSIGLHLPVERERADKLLEGYVMLY 135
           R ++IP++I L LP E ERAD   EG+V LY
Sbjct: 62  RGFAIPENILLRLPEEGERADNPPEGWVTLY 91

[Close]
BLAST of Moc03g03050 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 7.1e-13
Identity = 49/91 (53.85%), Postives = 61/91 (67.03%), Query Frame = 0 

Query: 44  SSPRRVDTSEDLVNRLDVELEEIENFRFSKDEGSDSDASTSSQGLEYLSQMLENYLVLFH 103
           SS    +   DL  RL+ +LEEIEN R S D+G DSDASTS QGLEY S++ E+YL    
Sbjct: 2   SSSISSNLESDLARRLESKLEEIENXRIS-DDGEDSDASTSGQGLEYPSRIPEHYLGSLR 61

Query: 104 RCYSIPDSIGLHLPVERERADKLLEGYVMLY 135
           R ++IP++I L LP E ERAD   EG+V LY
Sbjct: 62  RGFAIPENILLRLPEEGERADNPPEGWVTLY 91

The following BLAST results are available for this feature:
BLAST of Moc03g03050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159063.11.5e-1253.85uncharacterized protein LOC111025502, partial [Momordica charantia][more]
BLAST of Moc03g03050 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc03g03050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DXS57.1e-1353.85uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of Moc03g03050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc03g03050.1Moc03g03050.1mRNA