Moc03g02770 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g02770
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribulose bisphosphate carboxylase large chain
Location	chr3: 2094521 .. 2098699 (-)
RNA-Seq Expression	Moc03g02770
Synteny	Moc03g02770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTCAACATGGAAGTAGTGGTAATCTCACGAGGCTTCAAGAGATCTTATTTCCAGAATGGTTTAAAAAAAAGTGAGTTCTCAAGTTTGTTCGACGTCAAATGAAGTTGTGAATGAGTTGTATGCACTTGCCTGTGGCCCGGACCGTCGAGTAAATTCATATCAAGGGTGTGTTACTAATGGGGTTCGATTCAACACAAACGAGAGGGATGGTCGTTGCACCACTCAAAATAGTGGAGTGTGTGTATTTGGTGGAGATGATAATGAGAGATCCGACTTCTACGGTATTATTAAGGAAGTGATTGAATTGAAGTATATTAAAGACAAACGAGTTCTTCTATTTAGGTGCGATTGGTATGATAAAAATCTTAAGAAGAATCATGTTCGTCAAAATAATACCTTTACAAGCATAAACACGCGTCACTTATAGTATAAGAATGATCCGTTCATACTTGTTTCTCAAGCACAACGAGTATTTTATGTTGATGATCTCCAATTAGGTAATGGATGGAAAGTAGCTCAAAGAATTCAACACAAACATTTATGGGATGTGCCTGAAGTGGAAGAGATTGATTTAGTCGAAGCCGATATCAATCAATGTGTAGTGGATGAAGTGGATCTCGAGACACAAACATTTCATAGACCAGACATAGATCCAAGTATAGTATCTGACAATACTGGTACAATTGAGATAGTATTAAATTTTGATGAAGTACAAGATGAAATAGAGGATGAGGACGAGGACAGGACGAAGATGAATATGATGAAACAAAATCGTCGGATGAAATGGATGATGACTCTGACATTGATGAGTAATTCAATATGGTATATTATATGTTTTGTCAGTTTATAATTTTTATTTCGGACCAATCCTAACAACTTGTGTTCTGTTTTCTTATTTTCATTTTTTAGACAGAATGTCATCAGACAGCGAAGGTGAGGATATCATCGCTGGAATCACACGAGCTCGAGAGGAAACTCGTGGTGAATTCTTGTTACGAGTCGTAAATCAAGTTGGAAAAATCAAGCTCGAATGGACGGAGCAACAGGGTAGACCAGTTGGACCTAGGTTAGCTTCGTTTAATAACGAGATAGGCTATTTGGCACGCAACTATATTGATGTGAAGCATGTAAAGAAAAAAGAGATAATGGTCCTAGAGACTAATGAAATCATTGAGATGTTACTGGTAATCATTTTTTCTTATGTTGTATTTGTTGACCACTAATAATCAAATATGTTGTTAACTGGTTTTAATGACTACGTTTTGTAGGAGAATTTTGTTGTCGATATATCTCAGCCACATGTGCATAGATATATTTTATACGAGATTGGAACTCGATTCAAAGATTATCGAGCGAAACTAAATCGTCATTACAAAAAGTCACGTGATCCAGCACGTGCTCGCCAAAAACCATATAAAGACATAAAACAGGAAGATTGGAACATATTTAGGATGGAATCTCCTGCATGGAAGGTAACTAATATATGATCTTAATTCTTTGTTATCATTTTATAAGTATCGTTTCTTAACTAAACATATAATTTTGTAAGAAAAATCTGCCAAAAATAAGATGGCACGTAGTAAATTGAGGTTCAATCATCGAGGTAGACCAAAACCATTTCAGTGTCATCGAGAAGATTCGGTATGAACCAAATAATTTATTTAAATTGTATTGCTACTTTAGATTTTAGGTTCTTACTATTTTTACTACAACTTAACAATTTTTTTAATAGAGAAAAGAAGATGAGATATATTTAAGTCTCATTCATATATTCTTCAATATCAATTATTCGGAGGGGTTCAAGAGTTAAGAATAACAAGTTCTTCATTACCAAGAATAGAATAACCGCTTAGAATAACGAAACAGATTATATTTGTCGAGAAGTGCAAAATCGTATGGATACGATCCTCATTGTGCATCTTGATCAATTGGATCGTTTCTTTGTAGATTCCGATACGAAGCTTTTGTAGATGTGTTTCTGGGTATTCCTTTAGCATTTCGTCCAAGAGAAAGAGTTCCTCGCGTATGTATAAGACCGAATCCATTCGATTTCTAAAAAGGATTACTAATCCTTAACTTTTCGAGGAATCCTTCATCCGATTCATACAGATACAGAAGAAAAGGTTCTCTATTGATTCAAACACTGTACCCGCGGGATAGGGATAGAGAAAGAGGAAAAAAACGAAGATTTCACATAGTACTTTACTGGGATCTTAACTATTCCTAATTTCTATGAATATAGAATCTAATTTCAAATAAATATTGAATATTGGAATTGTTCTATTATAGAACATAATAATTAATATAACAATTAATAGAATATAGCGATTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTATTTGGGTTCAAGGCTCTGCGCGCTCTACGTCTGGAGGATTTGCGAATCCCTCCTGCTTATATTAAAACTTTCCAAGGACCGCCTCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGCCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGAGGTTGAATCCATGGGCAGGAAGGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCATAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTGGATCTTGTAGGATTCCCGAGAAATTCTTCGATTTCTTCCGGAAGCGGATGATTATTCATCTGCTTCTCACGTTCCGTGAATAGCCGGGACATTGAGGAATATCCAGAAAAGCATTTAGGGAATCGGTCTGATTCTATCTCTGTTCGTTCCGTTTAAAAGAAAGATCGATTCTTAAGAACGGGTTTCGTTCTAGTGCCCGAAAATAATATTCCAAAGCTTTCGTATGTTCGCCGTTCCTTGTGTGGATAAGACCTATGTTATAGAGTATATAACTTCGATCATAGGGATCGATTTCTAGTCGCATAGCTTCATAATAATTCTGTAGAGCTTCCGCATAATTTCCTTCGGATTGAGCCGACATCCGTTACGGTCGTTCGTTATTCCATTCAAAGAATCTCCGTTCCAGAACCGTACGTGAGATTTTCATCTCATACGGCTCCCCCTTTATGTGATGCGCATAATGAGATTAGAATAATACATGAAATCAAAAAAGATTGAAATACTCTCATTATGAACTGATGGGGCTAGCGTTTTTACAAAAAATCTCTAGCCAACCTTCCAGTAAAAGATCTTTTCTTAACATCAAGCATGTTGTTACTAGATAAAAATGGTAACTCTAACAATTTCTTTGTCCTCAACGCCTCTTAATTTCCAGGAATTAGTCACTTCAACAGTCTGGGATTAACGAGGAAGCGGGGAATTCATATGTAAGTATCATTTAATTTTGTCATATTTAAAGTATTGATGTAAGATATATATATCTTAAACCTCTTAACGACACATTTATTTTTTTCAGGAAGAAATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATAATGGAGACGATCTTTGGGATAAGATCGAACTATATAATAGGAATGAGACATGGACCAAAACCCACCAGAAATAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCATCTTCATAAGCATGAGGAAGAATTGACAACTAAACGAAAGGAGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAGGCATTGGAGGCCCAAAGCCAGGAGTTTAACAGGAAACTTCTCGAAACGCAACAAATGATTCTTTCGGGGCGAGGAAGTGAAGGGATGTGA

mRNA sequence

ATGGAGCTTCAACATGGAAGTAGTGGTAATGGATGGAAAGTAGCTCAAAGAATTCAACACAAACATTTATGGGATGTGCCTGAAGTGGAAGAGATTGATTTAGTCGAAGCCGATATCAATCAATGTGTAGTGGATGAAGTGGATCTCGAGACACAAACATTTCATAGACCAGACATAGATCCAAGTATAGTATCTGACAATACTGACAGAATGTCATCAGACAGCGAAGGTGAGGATATCATCGCTGGAATCACACGAGCTCGAGAGGAAACTCGTGGTGAATTCTTGTTACGAGTCGTAAATCAAGTTGGAAAAATCAAGCTCGAATGGACGGAGCAACAGGGTAGACCAGTTGGACCTAGATTCCGATACGAAGCTTTTGTAGATGTGTTTCTGGGTATTCCTTTAGCATTTCGTCCAAGAGAAAGAGTTCCTCGCGCTCTGCGCGCTCTACGTCTGGAGGATTTGCGAATCCCTCCTGCTTATATTAAAACTTTCCAAGGACCGCCTCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGCCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGAGGAAGAAATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATAATGGAGACGATCTTTGGGATAAGATCGAACTATATAATAGGAATGAGACATGGACCAAAACCCACCAGAAATAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCATCTTCATAAGCATGAGGAAGAATTGACAACTAAACGAAAGGAGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAGGCATTGGAGGCCCAAAGCCAGGAGTTTAACAGGAAACTTCTCGAAACGCAACAAATGATTCTTTCGGGGCGAGGAAGTGAAGGGATGTGA

Coding sequence (CDS)

ATGGAGCTTCAACATGGAAGTAGTGGTAATGGATGGAAAGTAGCTCAAAGAATTCAACACAAACATTTATGGGATGTGCCTGAAGTGGAAGAGATTGATTTAGTCGAAGCCGATATCAATCAATGTGTAGTGGATGAAGTGGATCTCGAGACACAAACATTTCATAGACCAGACATAGATCCAAGTATAGTATCTGACAATACTGACAGAATGTCATCAGACAGCGAAGGTGAGGATATCATCGCTGGAATCACACGAGCTCGAGAGGAAACTCGTGGTGAATTCTTGTTACGAGTCGTAAATCAAGTTGGAAAAATCAAGCTCGAATGGACGGAGCAACAGGGTAGACCAGTTGGACCTAGATTCCGATACGAAGCTTTTGTAGATGTGTTTCTGGGTATTCCTTTAGCATTTCGTCCAAGAGAAAGAGTTCCTCGCGCTCTGCGCGCTCTACGTCTGGAGGATTTGCGAATCCCTCCTGCTTATATTAAAACTTTCCAAGGACCGCCTCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGCCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGAGGAAGAAATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATAATGGAGACGATCTTTGGGATAAGATCGAACTATATAATAGGAATGAGACATGGACCAAAACCCACCAGAAATAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCATCTTCATAAGCATGAGGAAGAATTGACAACTAAACGAAAGGAGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAGGCATTGGAGGCCCAAAGCCAGGAGTTTAACAGGAAACTTCTCGAAACGCAACAAATGATTCTTTCGGGGCGAGGAAGTGAAGGGATGTGA

Protein sequence

MELQHGSSGNGWKVAQRIQHKHLWDVPEVEEIDLVEADINQCVVDEVDLETQTFHRPDIDPSIVSDNTDRMSSDSEGEDIIAGITRAREETRGEFLLRVVNQVGKIKLEWTEQQGRPVGPRFRYEAFVDVFLGIPLAFRPRERVPRALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGDEKTEEEIMETIFGIRSNYIIGMRHGPKPTRNKGSSSKYSDEYVESLEAHLHKHEEELTTKRKENEDQQIATQEQIQKALEAQSQEFNRKLLETQQMILSGRGSEGM

Homology

[Close]

BLAST of Moc03g02770 vs. NCBI nr
Match: ABI48087.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Fissidens adianthoides])

HSP 1 Score: 196.1 bits (497), Expect = 5.3e-46
Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAY KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 128 KALRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 187

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A + SQG+
Sbjct: 188 AVYECLRGGLDFTKDDENVNSQPFMRWRDRXLFVAEALYKSQGE 231

[Close]

BLAST of Moc03g02770 vs. NCBI nr
Match: ABB21704.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Plagiochila porelloides])

HSP 1 Score: 196.1 bits (497), Expect = 5.3e-46
Identity = 89/104 (85.58%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 118 KALRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 177

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A++ SQ +
Sbjct: 178 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAHYKSQAE 221

[Close]

BLAST of Moc03g02770 vs. NCBI nr
Match: AAL35628.1 (ribulose 1,5-bisphosphate carboxylase, partial [Aphloia theiformis])

HSP 1 Score: 196.1 bits (497), Expect = 5.3e-46
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 121 KALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 180

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A + +QG+
Sbjct: 181 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQGE 224

[Close]

BLAST of Moc03g02770 vs. NCBI nr
Match: ACC96779.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Cynanchum graphistemmatoides])

HSP 1 Score: 196.1 bits (497), Expect = 5.3e-46
Identity = 91/104 (87.50%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 105 KALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 164

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A   SQG+
Sbjct: 165 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQGE 208

[Close]

BLAST of Moc03g02770 vs. NCBI nr
Match: AOS89120.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Cynanchum graphistemmatoides])

HSP 1 Score: 196.1 bits (497), Expect = 5.3e-46
Identity = 91/104 (87.50%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 101 KALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 160

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A   SQG+
Sbjct: 161 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQGE 204

[Close]

BLAST of Moc03g02770 vs. ExPASy Swiss-Prot
Match: Q06RC1 (Ribulose bisphosphate carboxylase large chain OS=Jasminum nudiflorum OX=126431 GN=rbcL PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.5e-48
Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 128 KALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 187

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A + SQ +
Sbjct: 188 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAE 231

[Close]

BLAST of Moc03g02770 vs. ExPASy Swiss-Prot
Match: P34915 (Ribulose bisphosphate carboxylase large chain OS=Physcomitrium patens OX=3218 GN=rbcL PE=1 SV=2)

HSP 1 Score: 194.9 bits (494), Expect = 1.5e-48
Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAY KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 128 KALRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 187

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A + SQG+
Sbjct: 188 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQGE 231

[Close]

BLAST of Moc03g02770 vs. ExPASy Swiss-Prot
Match: P28440 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Pinguicula caerulea OX=4198 GN=rbcL PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.5e-48
Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 118 KALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 177

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A + SQ +
Sbjct: 178 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAE 221

[Close]

BLAST of Moc03g02770 vs. ExPASy Swiss-Prot
Match: P28394 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Coriaria myrtifolia OX=3460 GN=rbcL PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-48
Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 119 KALRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 178

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A + SQ +
Sbjct: 179 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAE 222

[Close]

BLAST of Moc03g02770 vs. ExPASy Swiss-Prot
Match: P28413 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Eriodictyon californicum OX=4132 GN=rbcL PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-48
Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 119 KALRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 178

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A + SQ +
Sbjct: 179 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAE 222

[Close]

BLAST of Moc03g02770 vs. ExPASy TrEMBL
Match: A1X4F3 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Plagiochila porelloides OX=70145 GN=rbcL PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.6e-46
Identity = 89/104 (85.58%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 118 KALRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 177

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A++ SQ +
Sbjct: 178 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAHYKSQAE 221

[Close]

BLAST of Moc03g02770 vs. ExPASy TrEMBL
Match: Q8WLK7 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Aphloia theiformis OX=112806 GN=rbcL PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.6e-46
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 121 KALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 180

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A + +QG+
Sbjct: 181 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQGE 224

[Close]

BLAST of Moc03g02770 vs. ExPASy TrEMBL
Match: A0A1I7PIL5 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Cynanchum graphistemmatoides OX=491991 GN=rbcL PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.6e-46
Identity = 91/104 (87.50%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 101 KALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 160

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A   SQG+
Sbjct: 161 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQGE 204

[Close]

BLAST of Moc03g02770 vs. ExPASy TrEMBL
Match: B5L2T5 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Cynanchum graphistemmatoides OX=491991 GN=rbcL PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.6e-46
Identity = 91/104 (87.50%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 105 KALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 164

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A   SQG+
Sbjct: 165 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQGE 208

[Close]

BLAST of Moc03g02770 vs. ExPASy TrEMBL
Match: Q09RH8 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Fissidens adianthoides OX=98470 GN=rbcL PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.6e-46
Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +ALRALRLEDLRIPPAY KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 128 KALRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 187

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A + SQG+
Sbjct: 188 AVYECLRGGLDFTKDDENVNSQPFMRWRDRXLFVAEALYKSQGE 231

[Close]

BLAST of Moc03g02770 vs. TAIR 10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases )

HSP 1 Score: 190.7 bits (483), Expect = 2.1e-48
Identity = 88/104 (84.62%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 146 RALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 205
           +AL ALRLEDLRIPPAY KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR
Sbjct: 128 KALAALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR 187

Query: 206 AVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AVYECLRGGLDFTKDDENVNSQPFMRWR+  +   +A + SQ +
Sbjct: 188 AVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAE 231

[Close]

BLAST of Moc03g02770 vs. TAIR 10
Match: AT2G07732.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain )

HSP 1 Score: 80.1 bits (196), Expect = 3.9e-15
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 200 AKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AKNYGRAVYECLRGGL FTKDDENVNSQPFMRWR+  +   +A + +Q +
Sbjct: 14  AKNYGRAVYECLRGGLYFTKDDENVNSQPFMRWRDRFLFCAEAVYKAQAE 63

[Close]

BLAST of Moc03g02770 vs. TAIR 10
Match: ATMG00280.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain )

HSP 1 Score: 80.1 bits (196), Expect = 3.9e-15
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 200 AKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWREEEMITLKAYHASQGD 250
           AKNYGRAVYECLRGGL FTKDDENVNSQPFMRWR+  +   +A + +Q +
Sbjct: 14  AKNYGRAVYECLRGGLYFTKDDENVNSQPFMRWRDRFLFCAEAVYKAQAE 63

The following BLAST results are available for this feature:

BLAST of Moc03g02770 vs. NCBI nr


Match Name	E-value	Identity	Description
ABI48087.1	5.3e-46	86.54	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Fissiden...	[more]
ABB21704.1	5.3e-46	85.58	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Plagioch...	[more]
AAL35628.1	5.3e-46	86.54	ribulose 1,5-bisphosphate carboxylase, partial [Aphloia theiformis]	[more]
ACC96779.1	5.3e-46	87.50	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Cynanchu...	[more]
AOS89120.1	5.3e-46	87.50	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Cynanchu...	[more]

BLAST of Moc03g02770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q06RC1	1.5e-48	86.54	Ribulose bisphosphate carboxylase large chain OS=Jasminum nudiflorum OX=126431 G...	[more]
P34915	1.5e-48	86.54	Ribulose bisphosphate carboxylase large chain OS=Physcomitrium patens OX=3218 GN...	[more]
P28440	1.5e-48	86.54	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Pinguicula caerulea ...	[more]
P28394	2.0e-48	85.58	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Coriaria myrtifolia ...	[more]
P28413	2.0e-48	85.58	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Eriodictyon californ...	[more]

BLAST of Moc03g02770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A1X4F3	2.6e-46	85.58	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Plagiochila porelloi...	[more]
Q8WLK7	2.6e-46	86.54	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Aphloia theiformis O...	[more]
A0A1I7PIL5	2.6e-46	87.50	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Cynanchum graphistem...	[more]
B5L2T5	2.6e-46	87.50	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Cynanchum graphistem...	[more]
Q09RH8	2.6e-46	86.54	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Fissidens adianthoid...	[more]

BLAST of Moc03g02770 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00490.1	2.1e-48	84.62	ribulose-bisphosphate carboxylases	[more]
AT2G07732.1	3.9e-15	70.00	Ribulose bisphosphate carboxylase large chain, catalytic domain	[more]
ATMG00280.1	3.9e-15	70.00	Ribulose bisphosphate carboxylase large chain, catalytic domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 292..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..291
IPR000685	Ribulose bisphosphate carboxylase, large subunit, C-terminal	PFAM	PF00016	RuBisCO_large	coord: 172..243 e-value: 1.5E-29 score: 103.2
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	GENE3D	3.20.20.110		coord: 167..257 e-value: 2.3E-35 score: 124.3
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	SUPERFAMILY	51649	RuBisCo, C-terminal domain	coord: 166..247
IPR033966	RuBisCO	PANTHER	PTHR42704	RIBULOSE BISPHOSPHATE CARBOXYLASE	coord: 147..251
IPR020878	Ribulose bisphosphate carboxylase, large chain, active site	PROSITE	PS00157	RUBISCO_LARGE	coord: 214..222
IPR036422	RuBisCO large subunit, N-terminal domain superfamily	SUPERFAMILY	54966	RuBisCO, large subunit, small (N-terminal) domain	coord: 146..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g02770.1	Moc03g02770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009853	photorespiration
biological_process	GO:0019253	reductive pentose-phosphate cycle
biological_process	GO:0015977	carbon fixation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016984	ribulose-bisphosphate carboxylase activity