Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGCTAGAACCAGCCCTCTTCTG AGTGTAGAACCAAGTTTTAAGGTTGATGTTGATGAAGCAACGACGATCAGAGATAGTTTGGGTGTGCCGATTAAAGCTAGTTTTGGAAGGATAATAGTGGAGACTGATTCGTGGCGGGTGTTTGCGATGGTTCAAGCAAAGAAGGAGAAGAGATTAGTGGTGGGGCTAATTTGTAACGACATCCAAGCCATGATTGCCCATACGAAAGAAATTACCTTTCGCGATTGTTGGAGAGGTGGAAACAAAGCAGCTCACGCGGCAGCTAAAATGGTAGTGAAGGCTAGTGTTGATGGAAGTTGA
ATGGTCGCTAGAACCAGCCCTCTTCTGAGTGTAGAACCAAGTTTTAAGGTTGATGTTGATGAAGCAACGACGATCAGAGATAGTTTGGGTGTGCCGATTAAAGCTAGTTTTGGAAGGATAATAGTGGAGACTGATTCGTGGCGGGTGTTTGCGATGGTTCAAGCAAAGAAGGAGAAGAGATTAGTGGTGGGGCTAATTTGTAACGACATCCAAGCCATGATTGCCCATACGAAAGAAATTACCTTTCGCGATTGTTGGAGAGGTGGAAACAAAGCAGCTCACGCGGCAGCTAAAATGGTAGTGAAGGCTAGTGTTGATGGAAGTTGA
ATGGTCGCTAGAACCAGCCCTCTTCTGAGTGTAGAACCAAGTTTTAAGGTTGATGTTGATGAAGCAACGACGATCAGAGATAGTTTGGGTGTGCCGATTAAAGCTAGTTTTGGAAGGATAATAGTGGAGACTGATTCGTGGCGGGTGTTTGCGATGGTTCAAGCAAAGAAGGAGAAGAGATTAGTGGTGGGGCTAATTTGTAACGACATCCAAGCCATGATTGCCCATACGAAAGAAATTACCTTTCGCGATTGTTGGAGAGGTGGAAACAAAGCAGCTCACGCGGCAGCTAAAATGGTAGTGAAGGCTAGTGTTGATGGAAGTTGA
MVARTSPLLSVEPSFKVDVDEATTIRDSLGVPIKASFGRIIVETDSWRVFAMVQAKKEKRLVVGLICNDIQAMIAHTKEITFRDCWRGGNKAAHAAAKMVVKASVDGS
Homology
BLAST of Moc03g02660 vs. NCBI nr
Match:
XP_021716820.1 (uncharacterized protein LOC110684687 [Chenopodium quinoa])
HSP 1 Score: 58.9 bits (141), Expect = 3.1e-05
Identity = 29/91 (31.87%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of Moc03g02660 vs. NCBI nr
Match:
XP_010681975.1 (PREDICTED: uncharacterized protein LOC104896887 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 53.9 bits (128), Expect = 9.9e-04
Identity = 27/86 (31.40%), Postives = 48/86 (55.81%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
XP_021716820.1 3.1e-05 31.87 uncharacterized protein LOC110684687 [Chenopodium quinoa] [more] XP_010681975.1 9.9e-04 31.40 PREDICTED: uncharacterized protein LOC104896887 [Beta vulgaris subsp. vulgaris] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
A T G G T C G C T A G A A C C A G C C C T C T T C T G A G T G T A G A A C C A A G T T T T A A G G T T G A T G T T G A T G A A G C A A C G A C G A T C A G A G A T A G T T T G G G T G T G C C G A T T A A A G C T A G T T T T G G A A G G A T A A T A G T G G A G A C T G A T T C G T G G C G G G T G T T T G C G A T G G T T C A A G C A A A G A A G G A G A A G A G A T T A G T G G T G G G G C T A A T T T G T A A C G A C A T C C A A G C C A T G A T T G C C C A T A C G A A A G A A A T T A C C T T T C G C G A T T G T T G G A G A G G T G G A A A C A A A G C A G C T C A C G C G G C A G C T A A A A T G G T A G T G A A G G C T A G T G T T G A T G G A A G T T G A 50 100 150 200 250 300 Expect = 2.1E-10 / Score = 40.5 Sequence PF13456
IPR Term IPR Description Source Source Term Source Description Alignment
IPR002156 Ribonuclease H domain PFAM PF13456 RVT_3 coord: 12..99
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0003676 nucleic acid binding
molecular_function
GO:0004523 RNA-DNA hybrid ribonuclease activity
