Moc03g01930 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g01930
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Location	chr3: 1460767 .. 1462622 (+)
RNA-Seq Expression	Moc03g01930
Synteny	Moc03g01930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAGAGACAAGATGATGTAAGCTTGGAATATAGGTTATAAATTCCTTTTCTAAAAATGTAGCAGCATTATTTAGCCTTCTTCTTTCCCCTACTCCAGTTGTAAAATTGTCTGGACTCAATAATTATTAGTTAGGTAGGTGATAAATAAAATTAGTTTAAGTTGTTTGTTTTTTTAGTATAATAGGTGAGACAGATGTTGGATTTTGGCAAAATATTGGAATGGAAGTTGTTCCACATTAGAAGAATAAAGGATGGTTTCCATGTGCTAGAAGTGTCCCACATCGGAAAAGTACAAGGAGGAGGAGTGTTCCAACTACTATAAAAGGAGCTCATGGGCTTGAGTTTTAATCATCTCAATTGAAATACTTTAAAGCTTGGTATTCCAACTCTAGTTAACTGAGCGATATTTGCTTTGAAAGACTGTTTTGTGTAATTGGGGTTGGGGAGAGAAATCTGTGTGATTGTAATAATTTTTCACATGGTGGATTTTCCCTTGTGGGTCGTGGTTTTTTCTCCGGTTTGGAGTTTTTCCACGTTAATTTTTGTATTTCTTTATTTTATTATTTTTTTAAAAAATTTCTCAATTATTTTCTGCTTATTCCTACATTAGAAGTAGTAGATTTTTTTCCCATCAAGTGGTATCAGAACTTTAGGTTTGTAGTTTGTAGAATTTCTGAGTATGCTCTGTGGTTCCAGTATTGTCTGAACTTCCGCATCAAAAAAGATTTCTTGAAACGAGTTACGGTTCTGTGAATAGTGTGGATTGTTCATTATTTGCAGATTCGCTTGGAGTGTGAAGCAGATATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGATGGAAGGATCAACTTCGGCTTGTGGCAAGTGCAAGTCAATGATGTGCTGATACAATCTGGGTTACACAAAGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTTTGAAAAGCTAAGCGGTGATAGTGGTCCAATGGAGTCCAGTGGTGGTTCCAGCAGAGGTTCTAAAAAGTCCAGCATGAGTGATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGCGATACGAAACAGGTTTGACTAAGAATATTTTTGTGAATGTGCATGGAATTTCGACAGCCAAAGAACTTTGGGAGAAGCTCGATGCGTTGTATCAGACAACGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACGCGTTGCGAATGGAAGAAGGTACGAAAATTTCAGATCATCTGAGTAATCTCAATAACATCATCTTTGAGTTGGAGGCGATCGAAATGAAGATAGATGACGAGGATAAAGAACTCAGGCTTATCTTATCACTTACACTTTCTTATGAACACAGGAAGCTGATCTTTATGTATGAGAAGGATACTTTGAATTTTGCCGAGACTATAGTAAATTCTTATCAGAGGAAAGAAGGCTGAAGAGTGAATGGCGTACTTTACATGAAAATTCGACACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCATACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTAGGCACATGAAGAAAGATTGTCCTAACAGAGCCGACTCGTCAAAGGGCTCTGGACGAGATGCCGACAGTGTTTCTCTCACAGGGGAGACGATGATCAGTTCCTTTGAAGAGAGAGAGAATTCATCCTCATGGTATGTCCGATTTACCATGATAGAAGATGTGATGTTAGCGGTTTCACAAGTTTACACATGGGCATTGATTTGGCGGTTATGCAAGGTGTGTGTGGTGGAAGTTATGTCGATGGCTAAAGAACTTCCAGGTTTATCGACATGCGATGATGAAAAAAAATTTTGA

mRNA sequence

ATGAGAAAGAGACAAGATGATATTCGCTTGGAGTGTGAAGCAGATATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGATGGAAGGATCAACTTCGGCTTGTGGCAAGTGCAAGTCAATGATGTGCTGATACAATCTGGGTTACACAAAGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTTTGAAAAGCTAAGCGGTGATAGTGGTCCAATGGAGTCCAGTGGTGGTTCCAGCAGAGCCAAAGAACTTTGGGAGAAGCTCGATGCGTTGTATCAGACAACGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACGCGTTGCGAATGGAAGAAGAGGAAAGAAGGCTGAAGAGTGAATGGCGTACTTTACATGAAAATTCGACACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCATACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTAGGCACATGAAGAAAGATTGTCCTAACAGAGCCGACTCGTCAAAGGGCTCTGGACGAGATGCCGACAGTGTTTCTCTCACAGGGGAGACGATGATCAGTTCCTTTGAAGAGAGAGAGAATTCATCCTCATGGTATGTCCGATTTACCATGATAGAAGATGTGATGTTAGCGGTTTCACAAGTTTACACATGGGCATTGATTTGGCGGTTATGCAAGGTGTGTGTGGTGGAAGTTATGTCGATGGCTAAAGAACTTCCAGGTTTATCGACATGCGATGATGAAAAAAAATTTTGA

Coding sequence (CDS)

ATGAGAAAGAGACAAGATGATATTCGCTTGGAGTGTGAAGCAGATATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGATGGAAGGATCAACTTCGGCTTGTGGCAAGTGCAAGTCAATGATGTGCTGATACAATCTGGGTTACACAAAGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTTTGAAAAGCTAAGCGGTGATAGTGGTCCAATGGAGTCCAGTGGTGGTTCCAGCAGAGCCAAAGAACTTTGGGAGAAGCTCGATGCGTTGTATCAGACAACGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACGCGTTGCGAATGGAAGAAGAGGAAAGAAGGCTGAAGAGTGAATGGCGTACTTTACATGAAAATTCGACACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCATACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTAGGCACATGAAGAAAGATTGTCCTAACAGAGCCGACTCGTCAAAGGGCTCTGGACGAGATGCCGACAGTGTTTCTCTCACAGGGGAGACGATGATCAGTTCCTTTGAAGAGAGAGAGAATTCATCCTCATGGTATGTCCGATTTACCATGATAGAAGATGTGATGTTAGCGGTTTCACAAGTTTACACATGGGCATTGATTTGGCGGTTATGCAAGGTGTGTGTGGTGGAAGTTATGTCGATGGCTAAAGAACTTCCAGGTTTATCGACATGCGATGATGAAAAAAAATTTTGA

Protein sequence

MRKRQDDIRLECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRPSEGAFEKLSGDSGPMESSGGSSRAKELWEKLDALYQTTGISNRLYLKEQFHALRMEEEERRLKSEWRTLHENSTLVASNWKKKKDSIQKKACCWGCGQSRHMKKDCPNRADSSKGSGRDADSVSLTGETMISSFEERENSSSWYVRFTMIEDVMLAVSQVYTWALIWRLCKVCVVEVMSMAKELPGLSTCDDEKKF

Homology

[Close]

BLAST of Moc03g01930 vs. NCBI nr
Match: XP_022139673.1 (uncharacterized protein LOC111010521 [Momordica charantia])

HSP 1 Score: 236.9 bits (603), Expect = 2.0e-58
Identity = 141/266 (53.01%), Postives = 145/266 (54.51%), Query Frame = 0


Query: 11  ECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRPSEGAFEKLSG 70
           ECEADMSFFMSPVKIDVEKFDG INFGLWQVQV DVLIQS LHKALKGRPSEGA EKLS 
Sbjct: 290 ECEADMSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSD 349

Query: 71  DSGPMESSGGSSR----------------------------------------AKELWEK 130
           D GPMESSGGSSR                                        AKELWEK
Sbjct: 350 DGGPMESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEK 409

Query: 131 LDALYQTTGISNRLYLKEQFHALRMEE--------------------------------- 170
           L+ALYQ  GISNRLYLKEQFH L+MEE                                 
Sbjct: 410 LEALYQAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDKALR 469

[Close]

BLAST of Moc03g01930 vs. NCBI nr
Match: KAF7810708.1 (cytochrome p450 [Senna tora])

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-29
Identity = 96/218 (44.04%), Postives = 112/218 (51.38%), Query Frame = 0


Query: 16  MSFFMSPVKIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRPSEGAFEK-----LSG 75
           MS F S +K DVEKFDGRINFG WQVQV DVLIQSGL KAL+G+ S    EK       G
Sbjct: 49  MSKFSSAMKFDVEKFDGRINFGWWQVQVKDVLIQSGLQKALEGKVSSKDSEKSESSMSDG 108

Query: 76  D-----------------SGPMESSGGSSRAKELWEKLDALYQTTGISNRLYLKEQFHAL 135
           D                    + +  G S AKELW+KL+ LYQ  GISNRL LKEQFH L
Sbjct: 109 DWEELDLRAASTIRLCLAKNVLANVQGISTAKELWKKLEGLYQAKGISNRLLLKEQFHTL 168

Query: 136 RMEE--------------------------EERRLKSEWRTLHENSTLVASNWKKKKDSI 186
           RM E                          EE+R+K E R    +S +V  N    +   
Sbjct: 169 RMNEDTKISDHLSTLNDTLNFEEVTSKIIYEEKRMKCESRN-SIDSVMVTKNGSDGRKKY 228

[Close]

BLAST of Moc03g01930 vs. NCBI nr
Match: KAE8670919.1 (hypothetical protein F3Y22_tig00112044pilonHSYRG00120 [Hibiscus syriacus])

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-28
Identity = 98/248 (39.52%), Postives = 128/248 (51.61%), Query Frame = 0


Query: 24  KIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRP---SEGAF----EKLSGDSGPME 83
           + D+EKFDGRINFGLWQVQV D+LIQSGL+KALKG+P   SEG         SGD G  +
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPTSLSEGKEPDKPSDSSGDKGKSK 63

Query: 84  SSGGS---------------------------SRAKELWEKLDALYQTTGISNRLYLKEQ 143
            S                              S   ELWEKL+ +YQ   +SNRLYLKE+
Sbjct: 64  MSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTNELWEKLEEMYQAKSLSNRLYLKEK 123

Query: 144 FHALRMEE--------EERRLKSEWRTLHENSTLVASNWKKKKDSIQKKACCWGCGQSRH 203
           FH L+MEE        EERRLK+      E+  L     +KK    +KK  CWGCGQ  H
Sbjct: 124 FHKLQMEEEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGCGQPGH 183

Query: 204 MKKDCPN-RADSSKGSGR----DADSVSLTGETMISSFEERENSSSWYVRF--TMIEDVM 223
           +KKDC N  A+S+ GS +    + ++     E +    +ER N+ +  V +   M E V+
Sbjct: 184 LKKDCKNGGANSANGSKKSTKGEVEAFQKAEEELNEIEKERNNAEANRVHYENVMKEKVL 243

[Close]

BLAST of Moc03g01930 vs. NCBI nr
Match: KAF7802225.1 (cytochrome p450 [Senna tora])

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-27
Identity = 94/221 (42.53%), Postives = 113/221 (51.13%), Query Frame = 0


Query: 16  MSFFMSPVKIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRPSEGAFEK-------- 75
           MS F S VK DVEKFDGRINFGLWQVQV DVLIQSGLHKAL+G+ S    EK        
Sbjct: 1   MSKFSSAVKFDVEKFDGRINFGLWQVQVKDVLIQSGLHKALEGKVSSKDSEKSESSMSDG 60

Query: 76  --------------LSGDSGPMESSGGSSRAKELWEKLDALYQTTGISNRLYLKEQFHAL 135
                         LS     + +  G S AKELW+KL+ LYQ  GISN L LKEQFH L
Sbjct: 61  DWEELDLRAASTIRLSLAKNVLANVQGISTAKELWKKLEGLYQAKGISNWLMLKEQFHTL 120

Query: 136 RMEE---------------------------EERRLKSEWR--TLHENSTLVASNWKKKK 186
            M+E                           E++ L+  W   + +E    +  + +KK 
Sbjct: 121 CMDEGTKISDHLSTLNSIVSELEAIAVKIDDEDKTLRLIWSLPSSYEYMKQILIDGRKK- 180

[Close]

BLAST of Moc03g01930 vs. NCBI nr
Match: KAF5765959.1 (putative RNA-directed DNA polymerase [Helianthus annuus])

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-26
Identity = 93/256 (36.33%), Postives = 118/256 (46.09%), Query Frame = 0


Query: 21  SPVKIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRPSEGAFEKLSGDS-------- 80
           SP++ DVEK+DGRINFGLWQVQV DVLIQSGLHKAL+G+P+  + +  SG S        
Sbjct: 5   SPMRFDVEKYDGRINFGLWQVQVKDVLIQSGLHKALRGKPTPVSSKDSSGTSKDDDEEWE 64

Query: 81  ----------------GPMESSGGSSRAKELWEKLDALYQTTGISNRLYLKEQFHALRME 140
                             + +  G S AK+LWEKL+ LYQ  GI NRLYLKEQFH LRM+
Sbjct: 65  DLDLRAASAIRLCLAKNVLANVHGISTAKDLWEKLEQLYQGKGIPNRLYLKEQFHTLRMD 124

Query: 141 ------------------------------------------------------------ 186
                                                                       
Sbjct: 125 GDTKISDHLSVLNNIVSELEAIGVKVEDEDKALRLILSLTSSYEHMKPILMYGKETLKYA 184

[Close]

BLAST of Moc03g01930 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 38/114 (33.33%), Postives = 58/114 (50.88%), Query Frame = 0


Query: 20  MSPVKIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRPSEGAFEKLSGDSGPMESSG 79
           MS VK +V KF+G   F  WQ ++ D+LIQ GLHK L     +    K    +   E + 
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 80  GSSR----------------AKELWEKLDALYQTTGISNRLYLKEQFHALRMEE 118
            + R                A+ +W +L++LY +  ++N+LYLK+Q +AL M E
Sbjct: 61  SAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSE 114

[Close]

BLAST of Moc03g01930 vs. ExPASy TrEMBL
Match: A0A6J1CG82 (uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010521 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 9.5e-59
Identity = 141/266 (53.01%), Postives = 145/266 (54.51%), Query Frame = 0


Query: 11  ECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRPSEGAFEKLSG 70
           ECEADMSFFMSPVKIDVEKFDG INFGLWQVQV DVLIQS LHKALKGRPSEGA EKLS 
Sbjct: 290 ECEADMSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEKLSD 349

Query: 71  DSGPMESSGGSSR----------------------------------------AKELWEK 130
           D GPMESSGGSSR                                        AKELWEK
Sbjct: 350 DGGPMESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKELWEK 409

Query: 131 LDALYQTTGISNRLYLKEQFHALRMEE--------------------------------- 170
           L+ALYQ  GISNRLYLKEQFH L+MEE                                 
Sbjct: 410 LEALYQAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDKALR 469

[Close]

BLAST of Moc03g01930 vs. ExPASy TrEMBL
Match: A0A6A2Y9V1 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112044pilonHSYRG00120 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 7.8e-29
Identity = 98/248 (39.52%), Postives = 128/248 (51.61%), Query Frame = 0


Query: 24  KIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRP---SEGAF----EKLSGDSGPME 83
           + D+EKFDGRINFGLWQVQV D+LIQSGL+KALKG+P   SEG         SGD G  +
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPTSLSEGKEPDKPSDSSGDKGKSK 63

Query: 84  SSGGS---------------------------SRAKELWEKLDALYQTTGISNRLYLKEQ 143
            S                              S   ELWEKL+ +YQ   +SNRLYLKE+
Sbjct: 64  MSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTNELWEKLEEMYQAKSLSNRLYLKEK 123

Query: 144 FHALRMEE--------EERRLKSEWRTLHENSTLVASNWKKKKDSIQKKACCWGCGQSRH 203
           FH L+MEE        EERRLK+      E+  L     +KK    +KK  CWGCGQ  H
Sbjct: 124 FHKLQMEEEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGCGQPGH 183

Query: 204 MKKDCPN-RADSSKGSGR----DADSVSLTGETMISSFEERENSSSWYVRF--TMIEDVM 223
           +KKDC N  A+S+ GS +    + ++     E +    +ER N+ +  V +   M E V+
Sbjct: 184 LKKDCKNGGANSANGSKKSTKGEVEAFQKAEEELNEIEKERNNAEANRVHYENVMKEKVL 243

[Close]

BLAST of Moc03g01930 vs. ExPASy TrEMBL
Match: V4T6T3 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003098mg PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26
Identity = 65/99 (65.66%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 19  FMSPVKIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRPSEGAFEKLSGDSGPMESS 78
           F SPVK ++EKFDGRINFGLWQVQV DVLIQSGLHKALKG+PS            P  +S
Sbjct: 6   FSSPVKFEIEKFDGRINFGLWQVQVKDVLIQSGLHKALKGKPS------------PASNS 65

Query: 79  GGSSRAKELWEKLDALYQTTGISNRLYLKEQFHALRMEE 118
           G     KELWEKL+ LY+T  ISNRLYLKE+FH LRM E
Sbjct: 66  GSGKTTKELWEKLEKLYRTKSISNRLYLKERFHTLRMTE 92

[Close]

BLAST of Moc03g01930 vs. ExPASy TrEMBL
Match: A0A2H5QXN2 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_271400 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26
Identity = 65/99 (65.66%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 19  FMSPVKIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRPSEGAFEKLSGDSGPMESS 78
           F SPVK ++EKFDGRINFGLWQVQV DVLIQSGLHKALKG+PS            P  +S
Sbjct: 6   FSSPVKFEIEKFDGRINFGLWQVQVKDVLIQSGLHKALKGKPS------------PASNS 65

Query: 79  GGSSRAKELWEKLDALYQTTGISNRLYLKEQFHALRMEE 118
           G     KELWEKL+ LY+T  ISNRLYLKE+FH LRM E
Sbjct: 66  GSGKTTKELWEKLEKLYRTKSISNRLYLKERFHTLRMTE 92

[Close]

BLAST of Moc03g01930 vs. ExPASy TrEMBL
Match: A0A6J1DNQ5 (uncharacterized protein LOC111022075 OS=Momordica charantia OX=3673 GN=LOC111022075 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-26
Identity = 64/76 (84.21%), Postives = 66/76 (86.84%), Query Frame = 0


Query: 8   IRLECEADMSFFMSPVKIDVEKFDGRINFGLWQVQVNDVLIQSGLHKALKGRPSEGAFEK 67
           IR ECEAD+SF MSPVKIDVEKFD  INFGLWQVQV DV+IQSGLHKALKGRPSE A EK
Sbjct: 137 IRQECEADISFLMSPVKIDVEKFDEMINFGLWQVQVKDVMIQSGLHKALKGRPSEDASEK 196

Query: 68  LSGDSGPMESSGGSSR 84
           LSGD GPMESS GS R
Sbjct: 197 LSGDGGPMESSDGSDR 212

The following BLAST results are available for this feature:

BLAST of Moc03g01930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139673.1	2.0e-58	53.01	uncharacterized protein LOC111010521 [Momordica charantia]	[more]
KAF7810708.1	1.1e-29	44.04	cytochrome p450 [Senna tora]	[more]
KAE8670919.1	1.6e-28	39.52	hypothetical protein F3Y22_tig00112044pilonHSYRG00120 [Hibiscus syriacus]	[more]
KAF7802225.1	1.4e-27	42.53	cytochrome p450 [Senna tora]	[more]
KAF5765959.1	1.5e-26	36.33	putative RNA-directed DNA polymerase [Helianthus annuus]	[more]

BLAST of Moc03g01930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.5e-08	33.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Moc03g01930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG82	9.5e-59	53.01	uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6A2Y9V1	7.8e-29	39.52	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]
V4T6T3	1.6e-26	65.66	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003098mg PE=4 ...	[more]
A0A2H5QXN2	1.6e-26	65.66	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_271400 PE=4 SV=1	[more]
A0A6J1DNQ5	3.6e-26	84.21	uncharacterized protein LOC111022075 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Moc03g01930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 80..119 e-value: 5.6E-8 score: 32.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..183
None	No IPR available	PANTHER	PTHR34676:SF6	SUBFAMILY NOT NAMED	coord: 19..62 coord: 80..123
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 19..62 coord: 80..123
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 153..168 score: 9.570305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g01930.1	Moc03g01930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding