Moc03g01820 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g01820
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr3: 1372574 .. 1373217 (-)
RNA-Seq Expression	Moc03g01820
Synteny	Moc03g01820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAGCTCCTCAAGCGATCTGAGAAGCTCCGACGAGACCCAGAAAAGCTCAATAAGGATATGTATTGTCGTTTTCATCACGATCACGACCATAATACATCAAATTGCTGGGAATTGAAGCGTCAAATTGAAGACCTGATTCAAGATGGCTACTTCAAAAAATTTGTTGGAAAACCGAGGTCCAACTCGGTGGAGAAGAAAGAAGAGAGGAAGCGTTTAAGGACGCCACCTCGTCGAGATGACCGACCTGCGGTCATCAACACTATTTTCGGGGGCCCTAGTGGGAGCCAGTCTGGAAATAAAAGGAAAGAGCTAGCTCGCGAGGCCAGGCGCGAGGTATGCATCATCAGGGAGTAGAAACCAACTTGCTCCATTAGCTTCGACGATGCCGATCTAGAGGGGATCCACTTGCCCCATAATGATGCACTTATGATCGTCCCTCTTATCGATCATGTCCTGGTCAGAAGAGTATTGGTAGATGGAGGCGCGTCTGCCAACATCTTGTCCCTCCCAACATATCTGGCCTTGGGATGAACCAGGTCTCAGTTGAAGAAGAGTCTAACACCCTTGGTTGGATTCTCTGGAGAATCGATCTCTCCAAAAGGGTGTATCGACTTGTCAGTTACGATTGGGCAAGATGA

mRNA sequence

ATGGAAAAGCTCCTCAAGCGATCTGAGAAGCTCCGACGAGACCCAGAAAAGCTCAATAAGGATATGTATTGTCGTTTTCATCACGATCACGACCATAATACATCAAATTGCTGGGAATTGAAGCGTCAAATTGAAGACCTGATTCAAGATGGCTACTTCAAAAAATTTGTTGGAAAACCGAGGTCCAACTCGGTGGAGAAGAAAGAAGAGAGGAAGCGTTTAAGGACGCCACCTCGTCGAGATGACCGACCTGCGGTCATCAACACTATTTTCGGGGGCCCTAGTGGGAGCCAGTCTGGAAATAAAAGGAAAGAGCTAGCTCGCGAGGCCAGGCGCGAGAAGAGTATTGGTAGATGGAGGCGCGTCTGCCAACATCTTGTCCCTCCCAACATATCTGGCCTTGGGATGAACCAGGTCTCAGTTGAAGAAGAGTCTAACACCCTTGGTTGGATTCTCTGGAGAATCGATCTCTCCAAAAGGGTGTATCGACTTGTCAGTTACGATTGGGCAAGATGA

Coding sequence (CDS)

ATGGAAAAGCTCCTCAAGCGATCTGAGAAGCTCCGACGAGACCCAGAAAAGCTCAATAAGGATATGTATTGTCGTTTTCATCACGATCACGACCATAATACATCAAATTGCTGGGAATTGAAGCGTCAAATTGAAGACCTGATTCAAGATGGCTACTTCAAAAAATTTGTTGGAAAACCGAGGTCCAACTCGGTGGAGAAGAAAGAAGAGAGGAAGCGTTTAAGGACGCCACCTCGTCGAGATGACCGACCTGCGGTCATCAACACTATTTTCGGGGGCCCTAGTGGGAGCCAGTCTGGAAATAAAAGGAAAGAGCTAGCTCGCGAGGCCAGGCGCGAGAAGAGTATTGGTAGATGGAGGCGCGTCTGCCAACATCTTGTCCCTCCCAACATATCTGGCCTTGGGATGAACCAGGTCTCAGTTGAAGAAGAGTCTAACACCCTTGGTTGGATTCTCTGGAGAATCGATCTCTCCAAAAGGGTGTATCGACTTGTCAGTTACGATTGGGCAAGATGA

Protein sequence

MEKLLKRSEKLRRDPEKLNKDMYCRFHHDHDHNTSNCWELKRQIEDLIQDGYFKKFVGKPRSNSVEKKEERKRLRTPPRRDDRPAVINTIFGGPSGSQSGNKRKELAREARREKSIGRWRRVCQHLVPPNISGLGMNQVSVEEESNTLGWILWRIDLSKRVYRLVSYDWAR

Homology

[Close]

BLAST of Moc03g01820 vs. NCBI nr
Match: XP_022150852.1 (uncharacterized protein LOC111018897 [Momordica charantia])

HSP 1 Score: 205.3 bits (521), Expect = 4.2e-49
Identity = 103/118 (87.29%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MEKLLKRSEKLRRDPEKLNKDMYCRFHHDHDHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60
           MEKLLKR EKLR DPEK NKD YC FHHDH HNT+NCWELKRQIEDLIQDGYFKKFVGKP
Sbjct: 1   MEKLLKRPEKLRGDPEKRNKDKYCHFHHDHGHNTTNCWELKRQIEDLIQDGYFKKFVGKP 60

Query: 61  RSNSVEKKEERKRLRTPPRRDDRPAVINTIFGGPSGSQSGNKRKELAREARREKSIGR 119
           R+NSVEK EERKR RTPPRRDDRPAVINTIFGGPSG Q GNKRKELAREARRE  I R
Sbjct: 61  RTNSVEKTEERKRSRTPPRRDDRPAVINTIFGGPSGGQFGNKRKELAREARREVCIIR 118

[Close]

BLAST of Moc03g01820 vs. NCBI nr
Match: XP_022158583.1 (uncharacterized protein LOC111025038 [Momordica charantia])

HSP 1 Score: 204.9 bits (520), Expect = 5.5e-49
Identity = 104/118 (88.14%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MEKLLKRSEKLRRDPEKLNKDMYCRFHHDHDHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60
           MEKLLKR EKLR +PEK NKD YCRFH DH HNTSNCWELK Q EDLIQDGYFKKFVGKP
Sbjct: 162 MEKLLKRPEKLRGEPEKRNKDKYCRFHRDHGHNTSNCWELKCQFEDLIQDGYFKKFVGKP 221

Query: 61  RSNSVEKKEERKRLRTPPRRDDRPAVINTIFGGPSGSQSGNKRKELAREARREKSIGR 119
           RSNSVEKKEERKR RTPPRRDDRPAVINTIFGGPSG QSGNKRKELAREARRE  I R
Sbjct: 222 RSNSVEKKEERKRSRTPPRRDDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIR 279

[Close]

BLAST of Moc03g01820 vs. NCBI nr
Match: XP_022149377.1 (uncharacterized protein LOC111017807 [Momordica charantia])

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-48
Identity = 103/118 (87.29%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MEKLLKRSEKLRRDPEKLNKDMYCRFHHDHDHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60
           MEKLLK  EKLR DPEK +KD  CRFH DHDHNT++CWELKRQIEDLIQDGYFKKFVGKP
Sbjct: 259 MEKLLKSPEKLRGDPEKRSKDKNCRFHRDHDHNTTSCWELKRQIEDLIQDGYFKKFVGKP 318

Query: 61  RSNSVEKKEERKRLRTPPRRDDRPAVINTIFGGPSGSQSGNKRKELAREARREKSIGR 119
           RSNSVEKKEERKR RTPPRRDDRPAVINTIFGGPSG QSGNKRKELAREARRE  I R
Sbjct: 319 RSNSVEKKEERKRSRTPPRRDDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIR 376

[Close]

BLAST of Moc03g01820 vs. NCBI nr
Match: XP_022148920.1 (uncharacterized protein LOC111017470 [Momordica charantia])

HSP 1 Score: 201.4 bits (511), Expect = 6.1e-48
Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MEKLLKRSEKLRRDPEKLNKDMYCRFHHDHDHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60
           MEKLLKR EKL+ DPEK NKD YCRFH DHDHNT++CWELKRQIE LIQDGYFKKFVGKP
Sbjct: 141 MEKLLKRPEKLQGDPEKRNKDKYCRFHRDHDHNTTSCWELKRQIEGLIQDGYFKKFVGKP 200

Query: 61  RSNSVEKKEERKRLRTPPRRDDRPAVINTIFGGPSGSQSGNKRKELAREARRE 114
           RSNSVEKKE+RKR RTPP RDDRPAVINTIFGGPSG QSGNKRKELAREARRE
Sbjct: 201 RSNSVEKKEKRKRSRTPPCRDDRPAVINTIFGGPSGGQSGNKRKELAREARRE 253

[Close]

BLAST of Moc03g01820 vs. NCBI nr
Match: XP_022152363.1 (uncharacterized protein LOC111020106 [Momordica charantia])

HSP 1 Score: 200.7 bits (509), Expect = 1.0e-47
Identity = 102/121 (84.30%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 1   MEKLLKRSEKLRRDPEKLNKDMYCRFHHDHDHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60
           MEKLLKR EKLR DP+K NKD YCRFH DH HNTSNCWELKRQIEDLIQDGYFKKFVGKP
Sbjct: 1   MEKLLKRPEKLRGDPKKRNKDKYCRFHRDHGHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60

Query: 61  RSNSVEKKEERKRLRTPPRRDDRPAVINTIFGGPSGSQSGNKRKELAREARREKSIGRWR 120
           RSNS EKKEERKR RTPPRRDDRPA+INTIF GPSG QS NKRKEL REARRE  I R +
Sbjct: 61  RSNSAEKKEERKRSRTPPRRDDRPAIINTIFRGPSGGQSRNKRKELVREARREVCIIREQ 120

Query: 121 R 122
           R
Sbjct: 121 R 121

[Close]

BLAST of Moc03g01820 vs. ExPASy TrEMBL
Match: A0A6J1DBW5 (uncharacterized protein LOC111018897 OS=Momordica charantia OX=3673 GN=LOC111018897 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.0e-49
Identity = 103/118 (87.29%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MEKLLKRSEKLRRDPEKLNKDMYCRFHHDHDHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60
           MEKLLKR EKLR DPEK NKD YC FHHDH HNT+NCWELKRQIEDLIQDGYFKKFVGKP
Sbjct: 1   MEKLLKRPEKLRGDPEKRNKDKYCHFHHDHGHNTTNCWELKRQIEDLIQDGYFKKFVGKP 60

Query: 61  RSNSVEKKEERKRLRTPPRRDDRPAVINTIFGGPSGSQSGNKRKELAREARREKSIGR 119
           R+NSVEK EERKR RTPPRRDDRPAVINTIFGGPSG Q GNKRKELAREARRE  I R
Sbjct: 61  RTNSVEKTEERKRSRTPPRRDDRPAVINTIFGGPSGGQFGNKRKELAREARREVCIIR 118

[Close]

BLAST of Moc03g01820 vs. ExPASy TrEMBL
Match: A0A6J1DWH9 (uncharacterized protein LOC111025038 OS=Momordica charantia OX=3673 GN=LOC111025038 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.7e-49
Identity = 104/118 (88.14%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MEKLLKRSEKLRRDPEKLNKDMYCRFHHDHDHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60
           MEKLLKR EKLR +PEK NKD YCRFH DH HNTSNCWELK Q EDLIQDGYFKKFVGKP
Sbjct: 162 MEKLLKRPEKLRGEPEKRNKDKYCRFHRDHGHNTSNCWELKCQFEDLIQDGYFKKFVGKP 221

Query: 61  RSNSVEKKEERKRLRTPPRRDDRPAVINTIFGGPSGSQSGNKRKELAREARREKSIGR 119
           RSNSVEKKEERKR RTPPRRDDRPAVINTIFGGPSG QSGNKRKELAREARRE  I R
Sbjct: 222 RSNSVEKKEERKRSRTPPRRDDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIR 279

[Close]

BLAST of Moc03g01820 vs. ExPASy TrEMBL
Match: A0A6J1D7S8 (uncharacterized protein LOC111017807 OS=Momordica charantia OX=3673 GN=LOC111017807 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.0e-48
Identity = 103/118 (87.29%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MEKLLKRSEKLRRDPEKLNKDMYCRFHHDHDHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60
           MEKLLK  EKLR DPEK +KD  CRFH DHDHNT++CWELKRQIEDLIQDGYFKKFVGKP
Sbjct: 259 MEKLLKSPEKLRGDPEKRSKDKNCRFHRDHDHNTTSCWELKRQIEDLIQDGYFKKFVGKP 318

Query: 61  RSNSVEKKEERKRLRTPPRRDDRPAVINTIFGGPSGSQSGNKRKELAREARREKSIGR 119
           RSNSVEKKEERKR RTPPRRDDRPAVINTIFGGPSG QSGNKRKELAREARRE  I R
Sbjct: 319 RSNSVEKKEERKRSRTPPRRDDRPAVINTIFGGPSGGQSGNKRKELAREARREVCIIR 376

[Close]

BLAST of Moc03g01820 vs. ExPASy TrEMBL
Match: A0A6J1D4A4 (uncharacterized protein LOC111017470 OS=Momordica charantia OX=3673 GN=LOC111017470 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.9e-48
Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MEKLLKRSEKLRRDPEKLNKDMYCRFHHDHDHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60
           MEKLLKR EKL+ DPEK NKD YCRFH DHDHNT++CWELKRQIE LIQDGYFKKFVGKP
Sbjct: 141 MEKLLKRPEKLQGDPEKRNKDKYCRFHRDHDHNTTSCWELKRQIEGLIQDGYFKKFVGKP 200

Query: 61  RSNSVEKKEERKRLRTPPRRDDRPAVINTIFGGPSGSQSGNKRKELAREARRE 114
           RSNSVEKKE+RKR RTPP RDDRPAVINTIFGGPSG QSGNKRKELAREARRE
Sbjct: 201 RSNSVEKKEKRKRSRTPPCRDDRPAVINTIFGGPSGGQSGNKRKELAREARRE 253

[Close]

BLAST of Moc03g01820 vs. ExPASy TrEMBL
Match: A0A6J1DEN7 (uncharacterized protein LOC111020106 OS=Momordica charantia OX=3673 GN=LOC111020106 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.0e-48
Identity = 102/121 (84.30%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 1   MEKLLKRSEKLRRDPEKLNKDMYCRFHHDHDHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60
           MEKLLKR EKLR DP+K NKD YCRFH DH HNTSNCWELKRQIEDLIQDGYFKKFVGKP
Sbjct: 1   MEKLLKRPEKLRGDPKKRNKDKYCRFHRDHGHNTSNCWELKRQIEDLIQDGYFKKFVGKP 60

Query: 61  RSNSVEKKEERKRLRTPPRRDDRPAVINTIFGGPSGSQSGNKRKELAREARREKSIGRWR 120
           RSNS EKKEERKR RTPPRRDDRPA+INTIF GPSG QS NKRKEL REARRE  I R +
Sbjct: 61  RSNSAEKKEERKRSRTPPRRDDRPAIINTIFRGPSGGQSRNKRKELVREARREVCIIREQ 120

Query: 121 R 122
           R
Sbjct: 121 R 121

The following BLAST results are available for this feature:

BLAST of Moc03g01820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150852.1	4.2e-49	87.29	uncharacterized protein LOC111018897 [Momordica charantia]	[more]
XP_022158583.1	5.5e-49	88.14	uncharacterized protein LOC111025038 [Momordica charantia]	[more]
XP_022149377.1	2.1e-48	87.29	uncharacterized protein LOC111017807 [Momordica charantia]	[more]
XP_022148920.1	6.1e-48	88.50	uncharacterized protein LOC111017470 [Momordica charantia]	[more]
XP_022152363.1	1.0e-47	84.30	uncharacterized protein LOC111020106 [Momordica charantia]	[more]

BLAST of Moc03g01820 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc03g01820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBW5	2.0e-49	87.29	uncharacterized protein LOC111018897 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DWH9	2.7e-49	88.14	uncharacterized protein LOC111025038 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D7S8	1.0e-48	87.29	uncharacterized protein LOC111017807 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1D4A4	2.9e-48	88.50	uncharacterized protein LOC111017470 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DEN7	5.0e-48	84.30	uncharacterized protein LOC111020106 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Moc03g01820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g01820.1	Moc03g01820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding