Moc03g01780 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g01780
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	nudC domain-containing protein 2
Location	chr3: 1348660 .. 1352568 (-)
RNA-Seq Expression	Moc03g01780
Synteny	Moc03g01780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGAAATTGGCTCCAGAAAAGCGCCATAGCTTCCTCCACAACGGTTCACGCTTTCTCTTCATCAATTTGATCTTGAGAATTTTCAATTGGAGCGAATGAATTCACTGTAGTGCCTGTCTTTTTGATATTTGTTCTCGCTTGCACGGCGTTTTTCAGGTCAGGAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATGTATATTAATTTGCCTCCAAATGTTCATTCGAAGCAATTCTACTGCAAGGTTCAGTCTAGGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATGTCAGTACGTTTGAATTTTCATCTCTCCCTCTCTCTCTCTCTCGCTTGATTTAAGTTTATGATTGTACCGATCGCTTCCGATCATTGATCTGCAGCACGACCTTACTGGCCCTGTGAAGACGGATTCTTCTTTCTGGACGCTAGGTGAGTGCAAATTCTCGATTGCTTGATGACTAAATGGAATGTCTAGGCGGTTTAATGTTATGCCTTTTAGATCAAACAAGTTCAATGGGACTGAATTTTGCTGGAGGATTGAGATAAATATAAGTATTCGATGGCACAGGTTGTTCCCTTGAAACTGCTCCAATGTTGTTTATTATATGCTGTAATAGCTTTATTTTTCTGTGGCAGAGGATGGCATAATGCACATTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCCATACAGGGACAGGGCCAACTTGATCCTTACTCTACCGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGGTCAGCTATTCTTGTGTACACTACATGAAGTCTATATAATATGCTTTTGTGGTTTTCATCTTTATGTTGATTTACCATGATTATTCAGAGACCAATTCTTTCAACTTACCAAATTTGATTTGTCATCCTACGGGGCTAGGATCATGGGTTTTGAACTTTTTATTGCTCAGGTTGATGGTTAATAGTAAGTGGAATGTTGTAATAAGTGCTAAATGTTGATAGCTGAAATGAGGATATTATGGCAAAAAACAACGATTGAAAAAAACAAGAGAGAAGAGAGAGGAAGAGAGAGGCTAATATGCTCAGTTAACTATAGCGATAAACATTGAACTGTTCCAATATAGAAGTAACTACTTTTAATGTTTTGCTATCCAGACTTGGTGGACTGAGTTCCTGGGAACTGACCAGTGGTAACTCATGTAAATTGCACGAGCACTTATGCCTGAGCGAAAGTTTGGTAGCTTATTCATGTATGATAGACAAACCAGATAGCCTAATTTTTTTTCCTATACTCACCCTGGATCAGAACGTTCTCCATGCCTGTTCCATTTGGCTCATCTTTTGGAGGCATCTAACTTAATTGAGTGTACCTAATAGATACACCACCATGCATATGTGACGCCCAGCATTGTCCTCCTCTCCTTGGGACAAATTTCCTCTCTAGACAGTTTTTTTTTTTAAAAAAAAAACTAGGAGTCATCACTTTGCTTTCCTATACCCAGAGGCACTTATGCCCGCCCCAAGGTCTAGACCTAGGAGACATCAAGGGTTTTTTGGTATTAAGCTTATTGAAAGGTTCAAACTTGAGACCTATAAGCCAGTATGATCGAGAGAAGCCGGGGCAAAATTTCCTCTCTAGACTTGAAAGTAAAATTTCAAACTTTGATTCCAAACAGATGAATCAGTTTTGTCAAATTGCTTCAAGTGACTGCAAATGATATGAGAGAGCCTAGTCTACCCCGTACATCACTGAGAGAGACATCTCTTACGAACTCAATTAGGTGCACTCAACGAGTGGGGGGTAAAATCCAGAATCAAATAGGTCCACCCTATGTTTAAGTGATGTCCCTACATTGGTGGCCTCTCCTTTACAAAAAATTCTCCATTCAAGTTGTACCTAAGATGACTTGTACTTATATCAACTGATATAGGGTTGTCGATAGATGAACCAAATTTTCCCAAGTTTTAATTGATAGGGGTCAGGGGAGAGCCCAATCATTCCATATGGCATCCACACTAGGCTCAAGAGTGCACTCTGCAAGGCTCTACTCCATCTGGAGCCTATCCTTGGAGGCATCCGTGGATCCCAATGGAGTTGAAGGAAAAACTTCCAATAAACCGATTGTCAAGTTGAAAGGGTACCCTGCTTCAACTATGTTTGTTGTAATTTGAATTCCTTGATTTTGTATTTTTCTTAAGCTTTTAAATTTTGTTAGATGGGATAAAAATAACTGGGTTATATTCATCCATTGCATAAGACTTCTGGTCTAATTCTGGTTTAGTCATTACAAATGTTATCCACTCAGAGTGTCACTTAAACACATACAATGATAGAGAATTCATGAATATGGATTATGGATGGGTCACAGTTTTTACTTTTTAAGAAAAACAGTTGTAGGATTCCTGGTAAAATTTCATTGGGTGCCGGTTTTTTGTATTCTCAAGTGGCAGTGTCGTAGTTGTTGATCTGCCTGACTGCCTCTGTATGGACTGCTGTTGAAAAGTTTTTATATTTTTGAGTTACATGAATACATTTCTTTTCCTTCAAGGCTTCAAAAGTCTTCTCAGTCAAGTGTCACGTTATGAAATCTTGAAATATAATCTGCACTAATCATTCTCTGCAGAACCCTGGTTTTGACTTCTCACAAGCTCAGTTTACGGGCAACTGTCCTGATCCAAGGACCTTCATGGGTGGAATTCGGTCAGATTGACAAAATATAGTGTGTAGCATTTATAACTTGCATGGATGTGACATCCGACTAATGCTTGGTAAATAATGTAGATTTTCTACTGGTCTTGATTTATGCAATCCCTGTAATGACTGCTATTTGTGGAAAGGAGATTTACTGAGTTCATGTGCAATCCATGTAATGAAGAGAAGATATTTAGTTAATATAAATCTTACCAAATATTTTTTATTATAAGTTTTTAACCTTCCATTTGGGTTGATAATTGATATAATCAAATCTAATTCCTAGAGTTTCAGCTCTGAGAGCATATGCAAGTTCAGGACTGACAGAGTTCAAAGTTCATGCCTTCATGGTAAATATAGTTACCGATATCATCATTCCCTATTTATTAGTTTACCTACATCCCAAAGGATCGCTTTGGTTTAGGTTATCCCCCAATTATGTTCCAAACTTCCAAGTATAATGAGATCCTATTTAGAGTTCAGCACTATGGGTTCACTTTAGTAATTAAAAGAGTAAAGAAACTAGAGAGAACGGGTCGAGAGTATGATAATCACATATTTAGGATTTCATGTCTTACGAGTTTTCTTGACTACCAAACATAGTAGGGTTAGAAAATTGTTATAATGTACGTGATGTACGTGCAAGCTAGCTCGGATATAAACTTAAAAATAAAAATGTTGTTTATAGTTCCTGTTCAGGCAGGTTGAATGTTCGAAGTGGGTGAATGAAAACATTTGGTTGCTGGGGCCTGCCCATCCTGCTGGCGTTGGCTGCTATTCCCTTTAGTAAAATAAGGGTTTTGGTTCCTCTAATCCATTGAATAATAGAAAATAAAGAGTGGAGAATTAGAGAAGGAATCCCATTCCAAAGGTGCTGAATTGAGGTGGTATTAGATTCCTAACCACTGTGTCATGGCCATTCATTGATATTCTGCATTTTTTTTGCCTCTCTTTTCAGATTCCCACCTCATGGGACGGACGAAGACTCCACTCCACCAGGTATGCAATTTATAATCTTTTTCTCTCTAGTGGTCCAAAGCAGAAGAAAGCCACTGGTGAGTTGAAACTTTAGTGTATATTTTTTTTACTTTTGAGAGTCCTGATAAAAGTTAAAGCTGATTATCTTTTAAGCTTTTCAGAATCCAAGTTTCCTGGGTGGTATTCTATGGCGGCTTCACTTTCTGTGACTTGA

mRNA sequence

ATGGAAGAGAAATTGGCTCCAGAAAAGCGCCATAGCTTCCTCCACAACGGTCAGGAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATGTATATTAATTTGCCTCCAAATGTTCATTCGAAGCAATTCTACTGCAAGGTTCAGTCTAGGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATCACGACCTTACTGGCCCTGTGAAGACGGATTCTTCTTTCTGGACGCTAGAGGATGGCATAATGCACATTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCCATACAGGGACAGGGCCAACTTGATCCTTACTCTACCGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGAACCCTGGTTTTGACTTCTCACAAGCTCAGTTTACGGGCAACTGTCCTGATCCAAGGACCTTCATGGGTGGAATTCGATTTTCTACTGGTCTTGATTTATGCAATCCCTGTAATGACTGCTATTTGTGGAAAGGAGATTTACTGAGTTCATGTGCAATCCATATTCCCACCTCATGGGACGGACGAAGACTCCACTCCACCAGGTATGCAATTTATAATCTTTTTCTCTCTAGTGGTCCAAAGCAGAAGAAAGCCACTGAATCCAAGTTTCCTGGGTGGTATTCTATGGCGGCTTCACTTTCTGTGACTTGA

Coding sequence (CDS)

ATGGAAGAGAAATTGGCTCCAGAAAAGCGCCATAGCTTCCTCCACAACGGTCAGGAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATGTATATTAATTTGCCTCCAAATGTTCATTCGAAGCAATTCTACTGCAAGGTTCAGTCTAGGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATCACGACCTTACTGGCCCTGTGAAGACGGATTCTTCTTTCTGGACGCTAGAGGATGGCATAATGCACATTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCCATACAGGGACAGGGCCAACTTGATCCTTACTCTACCGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGAACCCTGGTTTTGACTTCTCACAAGCTCAGTTTACGGGCAACTGTCCTGATCCAAGGACCTTCATGGGTGGAATTCGATTTTCTACTGGTCTTGATTTATGCAATCCCTGTAATGACTGCTATTTGTGGAAAGGAGATTTACTGAGTTCATGTGCAATCCATATTCCCACCTCATGGGACGGACGAAGACTCCACTCCACCAGGTATGCAATTTATAATCTTTTTCTCTCTAGTGGTCCAAAGCAGAAGAAAGCCACTGAATCCAAGTTTCCTGGGTGGTATTCTATGGCGGCTTCACTTTCTGTGACTTGA

Protein sequence

MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKGNPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQKRLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIRFSTGLDLCNPCNDCYLWKGDLLSSCAIHIPTSWDGRRLHSTRYAIYNLFLSSGPKQKKATESKFPGWYSMAASLSVT

Homology

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BLAST of Moc03g01780 vs. NCBI nr
Match: XP_022150966.1 (nudC domain-containing protein 2 [Momordica charantia])

HSP 1 Score: 337.0 bits (863), Expect = 1.3e-88
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60
           MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG
Sbjct: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60

Query: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK
Sbjct: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 156

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BLAST of Moc03g01780 vs. NCBI nr
Match: KAG6607306.1 (NudC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 324.7 bits (831), Expect = 6.5e-85
Identity = 149/155 (96.13%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60
           M EKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCK+QSRHVE+GIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKIQSRHVELGIKG 60

Query: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNH+LT PVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGI 156
           RLMLQRFQEENPGFDFSQAQF+GNCPDPRTFMGGI
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGI 155

[Close]

BLAST of Moc03g01780 vs. NCBI nr
Match: XP_022948776.1 (nudC domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 323.2 bits (827), Expect = 1.9e-84
Identity = 148/155 (95.48%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60
           M EKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCK+QSRHVE+GIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKIQSRHVELGIKG 60

Query: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNH+LT PVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQG+LDPYSTDLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGRLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGI 156
           RLMLQRFQEENPGFDFSQAQF+GNCPDPRTFMGGI
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGI 155

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BLAST of Moc03g01780 vs. NCBI nr
Match: KAG7036985.1 (NudC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 322.4 bits (825), Expect = 3.2e-84
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60
           M EKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCK+QSRHVE+GIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKIQSRHVELGIKG 60

Query: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNH+LT PVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQG GQLDPYSTDLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGPGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGI 156
           RLMLQRFQEENPGFDFSQAQF+GNCPDPRTFMGGI
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGI 155

[Close]

BLAST of Moc03g01780 vs. NCBI nr
Match: XP_023523271.1 (nudC domain-containing protein 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 7.2e-84
Identity = 147/155 (94.84%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60
           M EKLAPEKRHSFLHNGQEVFEWDQTLEEVN+YINLPPNVHSKQFYCK+QSRHVE+GIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQEVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVELGIKG 60

Query: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYL+H+LT PVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK
Sbjct: 61  NPPYLDHELTCPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGI 156
           RLMLQRFQEENPGFDFSQAQF+GNCPDPRTFMGGI
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGI 155

[Close]

BLAST of Moc03g01780 vs. ExPASy Swiss-Prot
Match: Q8WVJ2 (NudC domain-containing protein 2 OS=Homo sapiens OX=9606 GN=NUDCD2 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.4e-20
Identity = 54/140 (38.57%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 8   EKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKGNPPYLNH 67
           E+R   +  G    +W QTLEEV + + +PP   ++   C +QSRHV + + G    L  
Sbjct: 6   EERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALSV-GGREILKG 65

Query: 68  DLTGPVKTDSSFWTLEDGIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLEQKRLML 127
            L      D   WTLED  M    +T  KRD    W S ++ +   DP+  D  Q++L L
Sbjct: 66  KLFDSTIADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTL 125

Query: 128 QRFQEENPGFDFSQAQFTGN 145
           +RFQ+ENPGFDFS A+ +GN
Sbjct: 126 ERFQKENPGFDFSGAEISGN 144

[Close]

BLAST of Moc03g01780 vs. ExPASy Swiss-Prot
Match: Q9CQ48 (NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.4e-20
Identity = 54/140 (38.57%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 8   EKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKGNPPYLNH 67
           E+R   +  G    +W QTLEEV + + +PP   ++   C +QSRHV + + G    L  
Sbjct: 6   EERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAV-GGREILKG 65

Query: 68  DLTGPVKTDSSFWTLEDGIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLEQKRLML 127
            L      D   WTLED  M    +T  KRD    W S ++ +   DP+  D  Q++L L
Sbjct: 66  KLFDSTIADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTL 125

Query: 128 QRFQEENPGFDFSQAQFTGN 145
           +RFQ+ENPGFDFS A+ +GN
Sbjct: 126 ERFQKENPGFDFSGAEISGN 144

[Close]

BLAST of Moc03g01780 vs. ExPASy Swiss-Prot
Match: Q5M823 (NudC domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Nudcd2 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.6e-20
Identity = 51/126 (40.48%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 22  EWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKGNPPYLNHDLTGPVKTDSSFWT 81
           +W QTLEEV + + +PP   ++   C +QSRHV + + G    L   L      D   WT
Sbjct: 20  QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAV-GGREILKGKLFDSTIADEGTWT 79

Query: 82  LEDGIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLEQKRLMLQRFQEENPGFDFSQ 141
           LED  M    +T  KRD    W S ++ +   DP+  D  Q++L L+RFQ+ENPGFDFS 
Sbjct: 80  LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 139

Query: 142 AQFTGN 145
           A+ +GN
Sbjct: 140 AEISGN 144

[Close]

BLAST of Moc03g01780 vs. ExPASy Swiss-Prot
Match: Q9STN7 (Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.0e-13
Identity = 43/159 (27.04%), Postives = 75/159 (47.17%), Query Frame = 0


Query: 19  EVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKGNPPYLNHDLTGPVKTDSS 78
           E + W Q L+EV + I +P    S+   C+++   ++VG+KG    ++ +    VK D  
Sbjct: 134 EKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDC 193

Query: 79  FWTLED-GIMHITLQKRDKGQTWASPIQGQ---------------GQLDPYS-------- 138
           FW +ED  ++ + L K+D+ + W   ++G+               G LDP +        
Sbjct: 194 FWNIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMM 253

Query: 139 ------------TDLEQKRLMLQRFQEENPGFDFSQAQF 142
                       +D  +K+ ML++F  +NPG DFS A+F
Sbjct: 254 FDQRQKQMGLPRSDEIEKKDMLKKFMAQNPGMDFSNAKF 292

[Close]

BLAST of Moc03g01780 vs. ExPASy Swiss-Prot
Match: Q9LV09 (Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.6e-12
Identity = 40/159 (25.16%), Postives = 73/159 (45.91%), Query Frame = 0


Query: 19  EVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKGNPPYLNHDLTGPVKTDSS 78
           E + W Q L+EV + I +P    ++   C+++   ++VG+KG  P ++ +L   VK D  
Sbjct: 145 ENYSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDC 204

Query: 79  FWTLED-GIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLE------------------- 138
           +W +ED  ++ I L K D+ + W   ++G+ ++D    + E                   
Sbjct: 205 YWNIEDQKVISILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMM 264

Query: 139 ----------------QKRLMLQRFQEENPGFDFSQAQF 142
                           QK+ +L++F  E+P  DFS A+F
Sbjct: 265 FDQRQKQMGLPTSEELQKQEILKKFMSEHPEMDFSNAKF 303

[Close]

BLAST of Moc03g01780 vs. ExPASy TrEMBL
Match: A0A6J1DD50 (nudC domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111018990 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 6.1e-89
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60
           MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG
Sbjct: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60

Query: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK
Sbjct: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 156

[Close]

BLAST of Moc03g01780 vs. ExPASy TrEMBL
Match: A0A6J1GA51 (nudC domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452345 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 9.1e-85
Identity = 148/155 (95.48%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60
           M EKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCK+QSRHVE+GIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKIQSRHVELGIKG 60

Query: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNH+LT PVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQG+LDPYSTDLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGRLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGI 156
           RLMLQRFQEENPGFDFSQAQF+GNCPDPRTFMGGI
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGI 155

[Close]

BLAST of Moc03g01780 vs. ExPASy TrEMBL
Match: A0A0A0LV57 (CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530660 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.9e-83
Identity = 146/156 (93.59%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60
           M EKLAPEKRHSFLHNGQEVFEWDQTLEEVN+YINLPPNV+SKQFYCK+QSRHVE+GIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQEVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60

Query: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNH+LT PVKTDSSFWTLED IMHITLQKRDKGQTWASPIQGQGQLDPYS+DLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSSDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQF+GNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]

BLAST of Moc03g01780 vs. ExPASy TrEMBL
Match: A0A5A7SMF6 (NudC domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00610 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.8e-83
Identity = 146/156 (93.59%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60
           M EKLAPEKRHSFLHNGQ+VFEWDQTLEEVN+YINLPPNV+SKQFYCK+QSRHVEVGIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVEVGIKG 60

Query: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNH+LT PVKTDSSFWTLED IMHITLQKRDKGQTWASPIQGQGQLDPYS+DLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSSDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQF+GNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]

BLAST of Moc03g01780 vs. ExPASy TrEMBL
Match: A0A1S3C618 (nudC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103497082 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.8e-83
Identity = 146/156 (93.59%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60
           M EKLAPEKRHSFLHNGQ+VFEWDQTLEEVN+YINLPPNV+SKQFYCK+QSRHVEVGIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVEVGIKG 60

Query: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNH+LT PVKTDSSFWTLED IMHITLQKRDKGQTWASPIQGQGQLDPYS+DLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSSDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQF+GNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]

BLAST of Moc03g01780 vs. TAIR 10
Match: AT5G58740.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-82
Identity = 136/156 (87.18%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60
           M EKLAPEKRH F+HNGQ+VFEWDQTLEEVNMYI LPPNVH K F+CK+QS+H+EVGIKG
Sbjct: 1   MAEKLAPEKRHDFIHNGQKVFEWDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKG 60

Query: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNHDL+ PVKTD SFWTLED IMHITLQKR+KGQTWASPI GQGQLDPY+TDLEQK
Sbjct: 61  NPPYLNHDLSAPVKTDCSFWTLEDDIMHITLQKREKGQTWASPILGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQF+GNCPDPR+FMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR 156

[Close]

BLAST of Moc03g01780 vs. TAIR 10
Match: AT4G27890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 6.4e-14
Identity = 43/159 (27.04%), Postives = 75/159 (47.17%), Query Frame = 0


Query: 19  EVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKGNPPYLNHDLTGPVKTDSS 78
           E + W Q L+EV + I +P    S+   C+++   ++VG+KG    ++ +    VK D  
Sbjct: 134 EKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDC 193

Query: 79  FWTLED-GIMHITLQKRDKGQTWASPIQGQ---------------GQLDPYS-------- 138
           FW +ED  ++ + L K+D+ + W   ++G+               G LDP +        
Sbjct: 194 FWNIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMM 253

Query: 139 ------------TDLEQKRLMLQRFQEENPGFDFSQAQF 142
                       +D  +K+ ML++F  +NPG DFS A+F
Sbjct: 254 FDQRQKQMGLPRSDEIEKKDMLKKFMAQNPGMDFSNAKF 292

[Close]

BLAST of Moc03g01780 vs. TAIR 10
Match: AT5G53400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 5.4e-13
Identity = 40/159 (25.16%), Postives = 73/159 (45.91%), Query Frame = 0


Query: 19  EVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKGNPPYLNHDLTGPVKTDSS 78
           E + W Q L+EV + I +P    ++   C+++   ++VG+KG  P ++ +L   VK D  
Sbjct: 145 ENYSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDC 204

Query: 79  FWTLED-GIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLE------------------- 138
           +W +ED  ++ I L K D+ + W   ++G+ ++D    + E                   
Sbjct: 205 YWNIEDQKVISILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMM 264

Query: 139 ----------------QKRLMLQRFQEENPGFDFSQAQF 142
                           QK+ +L++F  E+P  DFS A+F
Sbjct: 265 FDQRQKQMGLPTSEELQKQEILKKFMSEHPEMDFSNAKF 303

The following BLAST results are available for this feature:

BLAST of Moc03g01780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150966.1	1.3e-88	100.00	nudC domain-containing protein 2 [Momordica charantia]	[more]
KAG6607306.1	6.5e-85	96.13	NudC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022948776.1	1.9e-84	95.48	nudC domain-containing protein 2-like [Cucurbita moschata]	[more]
KAG7036985.1	3.2e-84	95.48	NudC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023523271.1	7.2e-84	94.84	nudC domain-containing protein 2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc03g01780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8WVJ2	4.4e-20	38.57	NudC domain-containing protein 2 OS=Homo sapiens OX=9606 GN=NUDCD2 PE=1 SV=1	[more]
Q9CQ48	4.4e-20	38.57	NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1	[more]
Q5M823	7.6e-20	40.48	NudC domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Nudcd2 PE=2 SV...	[more]
Q9STN7	9.0e-13	27.04	Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1	[more]
Q9LV09	7.6e-12	25.16	Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1	[more]

BLAST of Moc03g01780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DD50	6.1e-89	100.00	nudC domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111018990 ...	[more]
A0A6J1GA51	9.1e-85	95.48	nudC domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452...	[more]
A0A0A0LV57	2.9e-83	93.59	CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530660 PE=4 SV=...	[more]
A0A5A7SMF6	3.8e-83	93.59	NudC domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3C618	3.8e-83	93.59	nudC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103497082 PE=4 SV...	[more]

BLAST of Moc03g01780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58740.1	1.1e-82	87.18	HSP20-like chaperones superfamily protein	[more]
AT4G27890.1	6.4e-14	27.04	HSP20-like chaperones superfamily protein	[more]
AT5G53400.1	5.4e-13	25.16	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007052	CS domain	PFAM	PF04969	CS	coord: 21..93 e-value: 1.4E-16 score: 61.3
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 16..104 score: 16.044819
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 16..102 e-value: 6.6E-21 score: 76.7
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 10..114
None	No IPR available	GENE3D	1.20.5.740	Single helix bin	coord: 103..131 e-value: 1.1E-5 score: 27.1
None	No IPR available	PANTHER	PTHR12356:SF18	HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN	coord: 2..148
None	No IPR available	CDD	cd06467	p23_NUDC_like	coord: 21..104 e-value: 7.29847E-34 score: 114.952
IPR037898	NudC family	PANTHER	PTHR12356	NUCLEAR MOVEMENT PROTEIN NUDC	coord: 2..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g01780.1	Moc03g01780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051082	unfolded protein binding