Moc03g01350 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc03g01350
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNase H domain-containing protein
Locationchr3: 1025226 .. 1026924 (-)
RNA-Seq ExpressionMoc03g01350
SyntenyMoc03g01350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACTCCATGCTTACAACGAGGGATTTGCACCGCCTCCGCTCGAAATATCGCATACCCGATTCAATCAACCTCCGCCTATCGAATCTCGGGGAGAGTGTCGATGGATCTTTTCCCGGAGAAGTCGTATTTTATGCGGCTATATTTAAATTTGGCGTTCGCCTTCCACTGCACCTATTTCTTCAAAATTTTCTAGCTTTTAACCAAGTGGCTCCCTATCAAATTGTTCCTAATGGGTGGTCCACATTGATCAGTTGCTTCATTCTGTGTTCCTATCTTGGGGGTGACCAACCCTTGACCGCGACCACCTTTATGTCGCTTTATTATCTTAAGCACAGCTTTGATGACAACTTTCATTTTTATATTAGCTCACGAAATCAAATTCTTATTTCGGGCCCTTCTTCTATAAAGCATTGGAAGGATGAGTGGTTCCTTGTCGGCGGTGACTGGCTTGCTCGAGACGACCATAGATTACATTTTCCTGTCCCGACAGAGTGTAGGGAGTTAGGTATGTAGCTTCCCGAACTCTCATCGGGACGTTCATACATCACATTCTAAACTCCTTCTTTCTCTTTTGTTGGCAGCTGCCCGTCCTACGAACTCTCTGCCGAAGCGTTGAATTTTTACTACTCCGTCCTCCAGCTGCTTGACGTTGAGCGGTGGGGTCCAGATCTGGTGAGCGAGCAGAACCTGGTGGATTTCGGCCTCTTCTACCCCCAGGTATCCATCTGAAGCTTTCTTTAAATTTGCTTTCAGTTGATCCTTATGTCATACTCTCTTTGTAGAAATGTCGAGATGGGCTACTTCCTTATTTGAAAGGGAATGTCGTCAGAATGCTCGAAGCTCGGGTGCTGGATCTAGTCGAGCTTCTGATGTCAAAATTACCGACTTGACGGAGGATGATCCCTTCTCTCGAGATCGGGCTCCATCGTCAAGACCTCTTACCGCACCCCGCCGCTCTACTCGGCTTCAAGGGACTTCAACTCCCTCCTCATCTCATGGCCCTCCCGGGTCTTATTCCCAGGTGTCGGCCTTCCCCTTTTTGGGCCCGTATGAAACCGAAATCGACGGGGCAGTTTATCTAGAGAGGGCTTTTACCCTTTGACAGTGATTGGGAGAGTCATCCAGTGGATCAAGCTTTGATTATTCTAACCCTCAGCAAAGCATCCATACTTGCCTCGACGATCTCCACCAGGTCAAAATCATAGTCGGTTTTCAATTTCTAATGTCGCTTCCTGCCAACACTGCTGTTGACTTTTGACAAGTTTTCAACCGCTTGGTTGTTTTTTCGGGTAGAGTCGCTGACGAAATTAACCATCTCCATGGTCATTATGCTCCTTGGGACGAGTTGGATTAGACCCTCGCCTCTCTAGATCAAGCCAATACGTTGTTGGCAAATGCCCAACACGACCAGGAGGTTGAATGGAGAAAATCCCGAGATGACCTCGCTGCTCTACAAAGGAAGCTCGACGAGGCTAATGATCGGTTATCTAACTCCAAATTCCTGGCCGCTGAGTTTAAGAAGACTCAGGACTATGTTGATCTACAGAATGCCGCCATGGAATGTGGCGTGTCCTGATCCCTCCGCCAAGTCTCTGAAAAGCATCCCGATGTTGACTATTCCTTTCTTCAGGAGCGTTTTCGGGATGAATGCAATGCTTCTGATGACATGGATGATAGTGACGACGACGAGTAG

mRNA sequence

ATGGACAACTCCATGCTTACAACGAGGGATTTGCACCGCCTCCGCTCGAAATATCGCATACCCGATTCAATCAACCTCCGCCTATCGAATCTCGGGGAGAGTGTCGATGGATCTTTTCCCGGAGAAGTCGTATTTTATGCGGCTATATTTAAATTTGGCGTTCGCCTTCCACTGCACCTATTTCTTCAAAATTTTCTAGCTTTTAACCAAGTGGCTCCCTATCAAATTGTTCCTAATGGGTGGTCCACATTGATCAGTTGCTTCATTCTGTGTTCCTATCTTGGGGGTGACCAACCCTTGACCGCGACCACCTTTATGTCGCTTTATTATCTTAAGCACAGCTTTGATGACAACTTTCATTTTTATATTAGCTCACGAAATCAAATTCTTATTTCGGGCCCTTCTTCTATAAAGCATTGGAAGGATGAGTGGTTCCTTGTCGGCGGTGACTGGCTTGCTCGAGACGACCATAGATTACATTTTCCTGTCCCGACAGAGTGTAGGGACTGCCCGTCCTACGAACTCTCTGCCGAAGCGTTGAATTTTTACTACTCCGTCCTCCAGCTGCTTGACGTTGAGCGGTGGGGTCCAGATCTGGTGAGCGAGCAGAACCTGGTGGATTTCGGCCTCTTCTACCCCCAGAATGCTCGAAGCTCGGGTGCTGGATCTAGTCGAGCTTCTGATGTCAAAATTACCGACTTGACGGAGGATGATCCCTTCTCTCGAGATCGGGCTCCATCGTCAAGACCTCTTACCGCACCCCGCCGCTCTACTCGGCTTCAAGGGACTTCAACTCCCTCCTCATCTCATGGCCCTCCCGGGTCTTATTCCCAGACCCTCGCCTCTCTAGATCAAGCCAATACGTTGTTGGCAAATGCCCAACACGACCAGGAGGTTGAATGGAGAAAATCCCGAGATGACCTCGCTGCTCTACAAAGGAAGCTCGACGAGGCTAATGATCGGTTATCTAACTCCAAATTCCTGGCCGCTGAGTTTAAGAAGACTCAGGACTATGAGCGTTTTCGGGATGAATGCAATGCTTCTGATGACATGGATGATAGTGACGACGACGAGTAG

Coding sequence (CDS)

ATGGACAACTCCATGCTTACAACGAGGGATTTGCACCGCCTCCGCTCGAAATATCGCATACCCGATTCAATCAACCTCCGCCTATCGAATCTCGGGGAGAGTGTCGATGGATCTTTTCCCGGAGAAGTCGTATTTTATGCGGCTATATTTAAATTTGGCGTTCGCCTTCCACTGCACCTATTTCTTCAAAATTTTCTAGCTTTTAACCAAGTGGCTCCCTATCAAATTGTTCCTAATGGGTGGTCCACATTGATCAGTTGCTTCATTCTGTGTTCCTATCTTGGGGGTGACCAACCCTTGACCGCGACCACCTTTATGTCGCTTTATTATCTTAAGCACAGCTTTGATGACAACTTTCATTTTTATATTAGCTCACGAAATCAAATTCTTATTTCGGGCCCTTCTTCTATAAAGCATTGGAAGGATGAGTGGTTCCTTGTCGGCGGTGACTGGCTTGCTCGAGACGACCATAGATTACATTTTCCTGTCCCGACAGAGTGTAGGGACTGCCCGTCCTACGAACTCTCTGCCGAAGCGTTGAATTTTTACTACTCCGTCCTCCAGCTGCTTGACGTTGAGCGGTGGGGTCCAGATCTGGTGAGCGAGCAGAACCTGGTGGATTTCGGCCTCTTCTACCCCCAGAATGCTCGAAGCTCGGGTGCTGGATCTAGTCGAGCTTCTGATGTCAAAATTACCGACTTGACGGAGGATGATCCCTTCTCTCGAGATCGGGCTCCATCGTCAAGACCTCTTACCGCACCCCGCCGCTCTACTCGGCTTCAAGGGACTTCAACTCCCTCCTCATCTCATGGCCCTCCCGGGTCTTATTCCCAGACCCTCGCCTCTCTAGATCAAGCCAATACGTTGTTGGCAAATGCCCAACACGACCAGGAGGTTGAATGGAGAAAATCCCGAGATGACCTCGCTGCTCTACAAAGGAAGCTCGACGAGGCTAATGATCGGTTATCTAACTCCAAATTCCTGGCCGCTGAGTTTAAGAAGACTCAGGACTATGAGCGTTTTCGGGATGAATGCAATGCTTCTGATGACATGGATGATAGTGACGACGACGAGTAG

Protein sequence

MDNSMLTTRDLHRLRSKYRIPDSINLRLSNLGESVDGSFPGEVVFYAAIFKFGVRLPLHLFLQNFLAFNQVAPYQIVPNGWSTLISCFILCSYLGGDQPLTATTFMSLYYLKHSFDDNFHFYISSRNQILISGPSSIKHWKDEWFLVGGDWLARDDHRLHFPVPTECRDCPSYELSAEALNFYYSVLQLLDVERWGPDLVSEQNLVDFGLFYPQNARSSGAGSSRASDVKITDLTEDDPFSRDRAPSSRPLTAPRRSTRLQGTSTPSSSHGPPGSYSQTLASLDQANTLLANAQHDQEVEWRKSRDDLAALQRKLDEANDRLSNSKFLAAEFKKTQDYERFRDECNASDDMDDSDDDE
Homology
BLAST of Moc03g01350 vs. NCBI nr
Match: XP_022156747.1 (uncharacterized protein LOC111023586 [Momordica charantia])

HSP 1 Score: 122.9 bits (307), Expect = 5.7e-24
Identity = 105/281 (37.37%), Postives = 132/281 (46.98%), Query Frame = 0

Query: 147  VGGDWLARDDHR-------LHFPVPTECRDCPSYELSAEALNFYYSVLQLLDVERWGPDL 206
            +  DW +  D R       ++  V   C      EL+ EA  FY++V+QL D+ERWGPDL
Sbjct: 982  IDSDWASDPDDRRSTSGFCVYLGVSRNC------ELTNEASTFYHTVIQLPDIERWGPDL 1041

Query: 207  VSEQNLVDFGLFYPQN-------------------ARSSGAGSSRASDVKITDLT---ED 266
            V+EQNLVDFGL  P N                   ARS  AGS RASD++  D +    D
Sbjct: 1042 VTEQNLVDFGLALPHNPPEMLRRSASLYEREHRRDARSLEAGSGRASDIEGLDDSSSWSD 1101

Query: 267  DPFSRDRAPSSRPLT----APRRSTRLQGTSTPSSSH-----GPPGSYSQTLASLDQANT 326
               S      S  L+       R     G      +H      P     Q ++SL+QAN+
Sbjct: 1102 FGLSNPHHSISTWLSDLHQIFNRLVVFSGWVADEINHLRCHYTPREKLEQAISSLNQANS 1161

Query: 327  LLANAQHDQEVEWRKSRDDLAALQRKLDEANDRLSNSKFLAAEFKKTQDY---------- 358
            LL   Q   E+E RKSRD+LA LQR+LDE N RL NS+FLA EFKKTQ+Y          
Sbjct: 1162 LLEGTQRKLEMEKRKSRDELANLQRRLDEVNARLFNSEFLAREFKKTQEYVDLQNSAMEC 1221

BLAST of Moc03g01350 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 100.9 bits (250), Expect = 2.3e-17
Identity = 58/162 (35.80%), Postives = 83/162 (51.23%), Query Frame = 0

Query: 11  LHRLRSKYRIPDSINLRLSNLGESVDGSFPGEVVFYAAIFKFGVRLPLHLFLQNFLAFNQ 70
           L  LR  + IP++I LRL   GE  D    G V  Y  +F++G+RLPLH F+Q FL    
Sbjct: 56  LGSLRRGFAIPENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRTG 115

Query: 71  VAPYQIVPNGWSTLISCFILCSYLGGD----QPLTATTFMSLYYLKHSFDDNFHFYISSR 130
           +AP Q+ PNGW  + +  IL      D    +       ++ +  K        FY+ +R
Sbjct: 116 LAPAQVAPNGWGVIFALAILFWLRARDSEEAELXDVDQLLACFEAKRIAKKPGRFYMCAR 175

Query: 131 NQI--LISGPSSIKHWKDEWFLVGGDWLARDDH-RLHFPVPT 166
                ++ GP+SIK W  +WF   G+WLA+D+  R  F VPT
Sbjct: 176 KGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPT 217

BLAST of Moc03g01350 vs. NCBI nr
Match: XP_022147193.1 (uncharacterized protein LOC111016203 [Momordica charantia])

HSP 1 Score: 94.7 bits (234), Expect = 1.7e-15
Identity = 57/84 (67.86%), Postives = 61/84 (72.62%), Query Frame = 0

Query: 268 SSHGPPGSYSQTLASLDQANTLLANAQHDQEVEWRKSRDDLAALQRKLDEANDRLSNSKF 327
           S H       QTLASLDQAN LLAN +HD EV   KS DDLAALQRKL+EANDRLSNSKF
Sbjct: 121 SHHARRDELDQTLASLDQANMLLANVRHDLEVGKGKSGDDLAALQRKLNEANDRLSNSKF 180

Query: 328 LAAEFKKTQDYERFRD---ECNAS 349
           LAAEFKKTQDY   ++   EC  S
Sbjct: 181 LAAEFKKTQDYVDLQNAAMECGVS 204

BLAST of Moc03g01350 vs. NCBI nr
Match: KAF3436913.1 (hypothetical protein FNV43_RR19666 [Rhamnella rubrinervis])

HSP 1 Score: 93.6 bits (231), Expect = 3.7e-15
Identity = 47/144 (32.64%), Postives = 73/144 (50.69%), Query Frame = 0

Query: 4   SMLTTRDLHRLRSKYRIPDSINLRLSNLGESVDGSFPGEVVFYAAIFKFGVRLPLHLFLQ 63
           S+    D+  L+ +Y  P++  L     GE  D    G + FY   FK G++LP H  + 
Sbjct: 79  SIFNPEDMPYLKKRYGFPENAILSAPTDGERADSVRDGWICFYEIAFKLGLKLPFHRIIS 138

Query: 64  NFLAFNQVAPYQIVPNGWSTLISCFILCSYLGGDQPLTATTFMSLYYLKHSFDDNFHFYI 123
             L +  +AP Q++PNGW  L+   +L   LG  Q +    F+  +YLK S +  + FY 
Sbjct: 139 MVLRYFNLAPGQLMPNGWRYLLGLIVLSERLG--QHIDMPIFLHFFYLKPSGEGRYAFYA 198

Query: 124 SSRNQILISGPSSIKHWKDEWFLV 148
             + ++L   P+S K WKD +F V
Sbjct: 199 RKQTKLLTGAPTSDKGWKDRYFFV 220

BLAST of Moc03g01350 vs. NCBI nr
Match: GFZ03787.1 (hypothetical protein Acr_16g0004110 [Actinidia rufa])

HSP 1 Score: 92.4 bits (228), Expect = 8.3e-15
Identity = 64/212 (30.19%), Postives = 96/212 (45.28%), Query Frame = 0

Query: 1   MDNSMLTTR-------DLHRLRSKYRIPDSINLRLSNLGESVDGSFPGEVVFYAAIFKFG 60
           MD S LT         +L +LRS Y  P  I LR+   GE++  +  GEV FY A F  G
Sbjct: 366 MDTSSLTKEVNVMSQAELDKLRSTYSFPSGIRLRIPGDGETILSARQGEVAFYEAAFLAG 425

Query: 61  VRLPLHLFLQNFLAFNQVAPYQIVPNGWSTLISCFILCSYLGGDQPLTATTFMSLYYLKH 120
           +R P+H  ++  L   ++ P Q+ PN W ++I   ++  Y    + +T   F  LY L  
Sbjct: 426 LRFPVHPTIREILVHYKICPAQLSPNAWRSVICSLVIWRYF--KRHMTCDEFRCLYSLSP 485

Query: 121 SFDDNFHFYISSRNQILISG-PSSIKHWKDEWFLVGGDWLARDDHRLHFP-----VPTEC 180
             D  ++++ +   + L  G PS++K WK  +F   GD          FP       T  
Sbjct: 486 LPDSGWYYFKARPEKNLFRGSPSNVKGWKTRFFFASGD-------EWEFPSGVVASDTTT 545

Query: 181 RDCPSYELSAEALNFYYSVLQLLDVERWGPDL 200
           R   S+ +  E L   +S L    V  W PD+
Sbjct: 546 RVPRSWGMPGEFLFRCFSFL----VSLWSPDM 564

BLAST of Moc03g01350 vs. ExPASy TrEMBL
Match: A0A6J1DSS1 (uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023586 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-24
Identity = 105/281 (37.37%), Postives = 132/281 (46.98%), Query Frame = 0

Query: 147  VGGDWLARDDHR-------LHFPVPTECRDCPSYELSAEALNFYYSVLQLLDVERWGPDL 206
            +  DW +  D R       ++  V   C      EL+ EA  FY++V+QL D+ERWGPDL
Sbjct: 982  IDSDWASDPDDRRSTSGFCVYLGVSRNC------ELTNEASTFYHTVIQLPDIERWGPDL 1041

Query: 207  VSEQNLVDFGLFYPQN-------------------ARSSGAGSSRASDVKITDLT---ED 266
            V+EQNLVDFGL  P N                   ARS  AGS RASD++  D +    D
Sbjct: 1042 VTEQNLVDFGLALPHNPPEMLRRSASLYEREHRRDARSLEAGSGRASDIEGLDDSSSWSD 1101

Query: 267  DPFSRDRAPSSRPLT----APRRSTRLQGTSTPSSSH-----GPPGSYSQTLASLDQANT 326
               S      S  L+       R     G      +H      P     Q ++SL+QAN+
Sbjct: 1102 FGLSNPHHSISTWLSDLHQIFNRLVVFSGWVADEINHLRCHYTPREKLEQAISSLNQANS 1161

Query: 327  LLANAQHDQEVEWRKSRDDLAALQRKLDEANDRLSNSKFLAAEFKKTQDY---------- 358
            LL   Q   E+E RKSRD+LA LQR+LDE N RL NS+FLA EFKKTQ+Y          
Sbjct: 1162 LLEGTQRKLEMEKRKSRDELANLQRRLDEVNARLFNSEFLAREFKKTQEYVDLQNSAMEC 1221

BLAST of Moc03g01350 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-17
Identity = 58/162 (35.80%), Postives = 83/162 (51.23%), Query Frame = 0

Query: 11  LHRLRSKYRIPDSINLRLSNLGESVDGSFPGEVVFYAAIFKFGVRLPLHLFLQNFLAFNQ 70
           L  LR  + IP++I LRL   GE  D    G V  Y  +F++G+RLPLH F+Q FL    
Sbjct: 56  LGSLRRGFAIPENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRTG 115

Query: 71  VAPYQIVPNGWSTLISCFILCSYLGGD----QPLTATTFMSLYYLKHSFDDNFHFYISSR 130
           +AP Q+ PNGW  + +  IL      D    +       ++ +  K        FY+ +R
Sbjct: 116 LAPAQVAPNGWGVIFALAILFWLRARDSEEAELXDVDQLLACFEAKRIAKKPGRFYMCAR 175

Query: 131 NQI--LISGPSSIKHWKDEWFLVGGDWLARDDH-RLHFPVPT 166
                ++ GP+SIK W  +WF   G+WLA+D+  R  F VPT
Sbjct: 176 KGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPT 217

BLAST of Moc03g01350 vs. ExPASy TrEMBL
Match: A0A2N9EDI3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS576 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-16
Identity = 68/215 (31.63%), Postives = 110/215 (51.16%), Query Frame = 0

Query: 4   SMLTTRDLHRLRSKYRIPDSINLRLSNLGE-SVDGSFPGEVVFYAAIFKFGVRLPLHLFL 63
           S +   D+ R+R +Y++PD + LR+ +  E +    + G+V FY A  + G+R P+  F+
Sbjct: 145 SKIRQDDIDRIRRRYQVPDDVVLRIPDPNERACCPKYEGDVAFYEADLRAGLRFPVQPFV 204

Query: 64  QNFLAFNQVAPYQIVPNGWSTLISCFILCSY-LGGDQPLTATTFMSLY-----YLKHSFD 123
           +  L F  +AP Q+ PNGW T+ISC ++      G++ LT   F+  Y      L   F 
Sbjct: 205 RELLDFLSLAPGQVNPNGWRTIISCMVMWRVNSNGEEDLTVDEFLFCYEPVQIALSRGF- 264

Query: 124 DNFHFYISSRNQILISG-PSSIKHWKDEWFLVGGD-W--LARDDHRLHFPVPTECRDCPS 183
             + F     N  ++ G PSS + WKD +F V GD W  L ++D R    V        S
Sbjct: 265 --WTFKNRDVNSRVVQGLPSSNRIWKDGYFFVCGDNWERLPQEDPRDFVGVRRAWGTPSS 324

Query: 184 YELSAEALNFYYS-VLQLLDVERWGPDLVSEQNLV 207
           +  SA  L+ +   +L++LD+E    D+  E +L+
Sbjct: 325 FGSSASKLSVWQERILRILDIEDRRYDIFIEPDLL 356

BLAST of Moc03g01350 vs. ExPASy TrEMBL
Match: A0A2N9HNJ5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41714 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.6e-16
Identity = 86/287 (29.97%), Postives = 135/287 (47.04%), Query Frame = 0

Query: 4   SMLTTRDLHRLRSKYRIPDSINLRLSNLGE-SVDGSFPGEVVFYAAIFKFGVRLPLHLFL 63
           S +T  D+HR+R +Y+IPD + LR+ +  E +    + G+V FY A  K G+R P+  F+
Sbjct: 60  SRVTQDDIHRMRGRYQIPDDVVLRIPDSDERACCPKYVGDVAFYEADLKAGLRFPIQPFV 119

Query: 64  QNFLAFNQVAPYQIVPNGWSTLISCFILCSYL-GGDQPLTATTFMSLY-----YLKHSFD 123
           + FL F  +AP QI PNGW T+I+C ++      G + LT   F+  Y      L   F 
Sbjct: 120 REFLDFLGLAPGQINPNGWRTIITCMVMWRVTSNGSEDLTVDEFLFCYEPCQIALSRGF- 179

Query: 124 DNFHFYISSRNQILISG-PSSIKHWKDEWFLVGGD-W--LARDDHRLHFPVPTECRDCPS 183
             + F     N  ++ G PSS + WKD++F V GD W  L ++D R    V         
Sbjct: 180 --WTFKNRDANTRIVQGLPSSDRIWKDKYFFVCGDNWERLPQEDPRDFVGVRRSWGTPSP 239

Query: 184 YELSAEALNFYYS--VLQLLDVERWGPDLVSEQNLV-DFGLFYPQNARSSGAGSSRASDV 243
             L    LN  +   +L++LD+E    ++  E +L+  F L    N  S+    +RA+  
Sbjct: 240 SVLDRPLLNSVWQQRILKILDIEDRRYNIFIEPDLLASFSLGPVPN--STVKALARANKK 299

Query: 244 KITDLTEDDPFSRDRAPSSRPLTAP---RRSTRLQGTSTPSSSHGPP 274
           ++  +  +    R  A S      P   +R    +G+S       PP
Sbjct: 300 RVNTMKLNKSRLRQLAQSGEVAAEPVVLKRKRAGEGSSQQIEEVRPP 341

BLAST of Moc03g01350 vs. ExPASy TrEMBL
Match: A0A6J1D0L6 (uncharacterized protein LOC111016203 OS=Momordica charantia OX=3673 GN=LOC111016203 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.1e-16
Identity = 57/84 (67.86%), Postives = 61/84 (72.62%), Query Frame = 0

Query: 268 SSHGPPGSYSQTLASLDQANTLLANAQHDQEVEWRKSRDDLAALQRKLDEANDRLSNSKF 327
           S H       QTLASLDQAN LLAN +HD EV   KS DDLAALQRKL+EANDRLSNSKF
Sbjct: 121 SHHARRDELDQTLASLDQANMLLANVRHDLEVGKGKSGDDLAALQRKLNEANDRLSNSKF 180

Query: 328 LAAEFKKTQDYERFRD---ECNAS 349
           LAAEFKKTQDY   ++   EC  S
Sbjct: 181 LAAEFKKTQDYVDLQNAAMECGVS 204

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156747.15.7e-2437.37uncharacterized protein LOC111023586 [Momordica charantia][more]
XP_022159063.12.3e-1735.80uncharacterized protein LOC111025502, partial [Momordica charantia][more]
XP_022147193.11.7e-1567.86uncharacterized protein LOC111016203 [Momordica charantia][more]
KAF3436913.13.7e-1532.64hypothetical protein FNV43_RR19666 [Rhamnella rubrinervis][more]
GFZ03787.18.3e-1530.19hypothetical protein Acr_16g0004110 [Actinidia rufa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DSS12.8e-2437.37uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DXS51.1e-1735.80uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A2N9EDI32.1e-1631.63Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS576 PE=4 SV=1[more]
A0A2N9HNJ53.6e-1629.97Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41714 PE=4 SV=1[more]
A0A6J1D0L68.1e-1667.86uncharacterized protein LOC111016203 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 301..328
NoneNo IPR availablePFAMPF04195Transposase_28coord: 43..112
e-value: 7.1E-10
score: 39.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..244
NoneNo IPR availablePANTHERPTHR31099OS06G0165300 PROTEINcoord: 10..147
NoneNo IPR availablePANTHERPTHR31099:SF14OS06G0165300 PROTEINcoord: 10..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc03g01350.1Moc03g01350.1mRNA