Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGTCTAACTGATGCAGTATCGCTATTAGCATTCATGTCAGGCATCAAGGACGAGCACCTGTAATTTTCATTCAGAAAGAAAACTCAGAGCAGTTTCGCGGAAGCACTAAGCCGAGCTTAGAAATACATAAGTCCTGGGGAGTTCTTCCATTCAAAGAAAGAGTCTGAAGGGAGGCGCGCCGACCAGAAAAGAGAGAGATCAAGGGAAAAGCCCCTAAGCTCGAAGTGGGAGAAGCGAGATCGGGTCGTCGGACAGAAGGATCTACCTATGAAGTTTGAAAAGTATACTCCGACCACGGTTCCATTGGAGCAGGTATTGATGGAGATCAAAGACCAAAAGCTACTTAAATGGCCAGAGAGGATGAAGGCGCCTCCGAACAAGAGAAGCAAAGGGCGATACTGCCTCCTCCAAATAGACCATGGACATGTTACACAGGATTGCTTTGATCTCAAGGAAGTGGTAGAAGGGCTCATCCGGAAAGGGTACCTCAAAGAATATGTGGATGATCTCAAAGCAACTCCGAATAGGGAAAATGACAACAAATCCCCTATCAGGGAAATTCGTACGATCATTGGAGGTTCAACAGAACAGGAGTCTGGCAGGAAGAGAAATACAAGTGTACGGGAAGCAAGAATGGGCCTAGGGTAA
mRNA sequence
ATGGAGGGTCTAACTGATGCAGTATCGCTATTAGCATTCATGTCAGGCATCAAGGACGAGCACCTTCCTGGGGAGTTCTTCCATTCAAAGAAAGAGTCTGAAGGGAGGCGCGCCGACCAGAAAAGAGAGAGATCAAGGGAAAAGCCCCTAAGCTCGAAGTGGGAGAAGCGAGATCGGGTCGTCGGACAGAAGGATCTACCTATGAAGTTTGAAAAGTATACTCCGACCACGGTTCCATTGGAGCAGGTATTGATGGAGATCAAAGACCAAAAGCTACTTAAATGGCCAGAGAGGATGAAGGCGCCTCCGAACAAGAGAAGCAAAGGGCGATACTGCCTCCTCCAAATAGACCATGGACATGTTACACAGGATTGCTTTGATCTCAAGGAAGTGGTAGAAGGGCTCATCCGGAAAGGGTACCTCAAAGAATATGTGGATGATCTCAAAGCAACTCCGAATAGGGAAAATGACAACAAATCCCCTATCAGGGAAATTCGTACGATCATTGGAGGTTCAACAGAACAGGAGTCTGGCAGGAAGAGAAATACAAGTGTACGGGAAGCAAGAATGGGCCTAGGGTAA
Coding sequence (CDS)
ATGGAGGGTCTAACTGATGCAGTATCGCTATTAGCATTCATGTCAGGCATCAAGGACGAGCACCTTCCTGGGGAGTTCTTCCATTCAAAGAAAGAGTCTGAAGGGAGGCGCGCCGACCAGAAAAGAGAGAGATCAAGGGAAAAGCCCCTAAGCTCGAAGTGGGAGAAGCGAGATCGGGTCGTCGGACAGAAGGATCTACCTATGAAGTTTGAAAAGTATACTCCGACCACGGTTCCATTGGAGCAGGTATTGATGGAGATCAAAGACCAAAAGCTACTTAAATGGCCAGAGAGGATGAAGGCGCCTCCGAACAAGAGAAGCAAAGGGCGATACTGCCTCCTCCAAATAGACCATGGACATGTTACACAGGATTGCTTTGATCTCAAGGAAGTGGTAGAAGGGCTCATCCGGAAAGGGTACCTCAAAGAATATGTGGATGATCTCAAAGCAACTCCGAATAGGGAAAATGACAACAAATCCCCTATCAGGGAAATTCGTACGATCATTGGAGGTTCAACAGAACAGGAGTCTGGCAGGAAGAGAAATACAAGTGTACGGGAAGCAAGAATGGGCCTAGGGTAA
Protein sequence
MEGLTDAVSLLAFMSGIKDEHLPGEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREARMGLG
Homology
BLAST of Moc03g01340 vs. NCBI nr
Match:
XP_022159192.1 (uncharacterized protein LOC111025612 [Momordica charantia])
HSP 1 Score: 294.7 bits (753), Expect = 6.0e-76
Identity = 156/202 (77.23%), Postives = 160/202 (79.21%), Query Frame = 0
Query: 14 MSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKP 73
MSGIKDEHL EFFH KKE EG+RADQKRERS EKP
Sbjct: 1 MSGIKDEHLSFSFGKKTPSTFAEALSRAQKYMSAEEFFHLKKELEGKRADQKRERSGEKP 60
Query: 74 LSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKG 133
LSSKWEK+DRVVGQKDLP KFEKYTPTTVPLEQVLMEIKDQ+LLKWPE MKAPPNKRSKG
Sbjct: 61 LSSKWEKQDRVVGQKDLPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKG 120
Query: 134 RYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTII 192
RYCL DHGH T DCFDLKE VEGLIRKGYLKEYVDDLKATPNRENDNKSP REIRTI+
Sbjct: 121 RYCLFHRDHGHATLDCFDLKEEVEGLIRKGYLKEYVDDLKATPNRENDNKSPTREIRTIM 180
BLAST of Moc03g01340 vs. NCBI nr
Match:
XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])
HSP 1 Score: 262.7 bits (670), Expect = 2.5e-66
Identity = 142/213 (66.67%), Postives = 159/213 (74.65%), Query Frame = 0
Query: 1 MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGR 60
+EGLTDAVSLLAFMSG++DEHL GEFF+SK+E +G+
Sbjct: 304 VEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGK 363
Query: 61 RADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWP 120
R D KRERS +KP S+WEKRDR QKD P KFEKYTPTTVP+EQVLMEIKDQ+LLKWP
Sbjct: 364 RTDPKRERSGDKPQGSRWEKRDR-SSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWP 423
Query: 121 ERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNREN 180
ERMKA KRSKGRYCL DHGH TQDCFDLKE VEGLIR+GYLKEYV++ KAT N E+
Sbjct: 424 ERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQNGES 483
Query: 181 DNKSPIREIRTIIGGSTEQESGRKRNTSVREAR 190
D KSP REIRTI+GG E+ESGRKR VREAR
Sbjct: 484 D-KSPAREIRTIMGGPIERESGRKRKADVREAR 514
BLAST of Moc03g01340 vs. NCBI nr
Match:
XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])
HSP 1 Score: 253.8 bits (647), Expect = 1.2e-63
Identity = 139/213 (65.26%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 1 MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGR 60
+EGLTDAVSLLAF+ G++DEHL GEFF+SK+ES G+
Sbjct: 129 VEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSRAQRYMSAGEFFYSKRESNGK 188
Query: 61 RADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWP 120
R DQKRERS +KP S+WEKRDR QKD P KFEKYT TTVPLEQVLMEIK+Q+LLKWP
Sbjct: 189 RTDQKRERSGDKPQGSRWEKRDRSC-QKDPPQKFEKYTSTTVPLEQVLMEIKNQRLLKWP 248
Query: 121 ERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNREN 180
ERM A KRSKGRYCL DHGH TQDCFDLKE VEGLI +GYLKEYV++ KAT N E+
Sbjct: 249 ERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLILRGYLKEYVEEPKATQNGES 308
Query: 181 DNKSPIREIRTIIGGSTEQESGRKRNTSVREAR 190
D KSP REIRTI+GG E+ESGRKR VREAR
Sbjct: 309 D-KSPAREIRTIMGGPIERESGRKRKPDVREAR 339
BLAST of Moc03g01340 vs. NCBI nr
Match:
XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])
HSP 1 Score: 252.3 bits (643), Expect = 3.4e-63
Identity = 137/213 (64.32%), Postives = 155/213 (72.77%), Query Frame = 0
Query: 1 MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGR 60
+E LTD VSLLAFMSG++DEHL GEFF+SK+E +G+
Sbjct: 88 IESLTDVVSLLAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKREPDGK 147
Query: 61 RADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWP 120
R DQKRERS +KP S+WEKRDR QKD P KFEKYTPTTVPLEQVLMEIKDQ+LLKWP
Sbjct: 148 RTDQKRERSGDKPQGSRWEKRDR-SSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWP 207
Query: 121 ERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNREN 180
ERMK P KRSKGRYCL DH H TQD FDLKE VEGLIR+GYL+EYV++ KAT N E+
Sbjct: 208 ERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKATQNGES 267
Query: 181 DNKSPIREIRTIIGGSTEQESGRKRNTSVREAR 190
+ KSP REIRTI+GG E+ES RKR VREAR
Sbjct: 268 E-KSPAREIRTIMGGPIERESARKRKADVREAR 298
BLAST of Moc03g01340 vs. NCBI nr
Match:
XP_022143483.1 (uncharacterized protein LOC111013355 [Momordica charantia])
HSP 1 Score: 189.5 bits (480), Expect = 2.7e-44
Identity = 106/169 (62.72%), Postives = 122/169 (72.19%), Query Frame = 0
Query: 24 GEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQV 83
GEFFHSKK+ EG+ +DQK ERSR+KP S+WEKRDR QKD P KF+KYTPTTVPL QV
Sbjct: 4 GEFFHSKKKPEGKWSDQKSERSRDKPHESRWEKRDR-TSQKDPPRKFKKYTPTTVPLGQV 63
Query: 84 LMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKE 143
+M+IKDQ+LLK ERMK P N CFDLKE VEGLIR+GYLKE
Sbjct: 64 VMDIKDQRLLKSLERMKTPLN--------------------CFDLKEEVEGLIRRGYLKE 123
Query: 144 YVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREARMGL 193
YV+D KAT N +ND+KSP REIRTI+GG E+E GRKRN S+RE R L
Sbjct: 124 YVEDPKATQNGDNDSKSPAREIRTIMGGPVEREFGRKRNASMRETRASL 151
BLAST of Moc03g01340 vs. ExPASy TrEMBL
Match:
A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)
HSP 1 Score: 294.7 bits (753), Expect = 2.9e-76
Identity = 156/202 (77.23%), Postives = 160/202 (79.21%), Query Frame = 0
Query: 14 MSGIKDEHL------------------------PGEFFHSKKESEGRRADQKRERSREKP 73
MSGIKDEHL EFFH KKE EG+RADQKRERS EKP
Sbjct: 1 MSGIKDEHLSFSFGKKTPSTFAEALSRAQKYMSAEEFFHLKKELEGKRADQKRERSGEKP 60
Query: 74 LSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWPERMKAPPNKRSKG 133
LSSKWEK+DRVVGQKDLP KFEKYTPTTVPLEQVLMEIKDQ+LLKWPE MKAPPNKRSKG
Sbjct: 61 LSSKWEKQDRVVGQKDLPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKG 120
Query: 134 RYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNRENDNKSPIREIRTII 192
RYCL DHGH T DCFDLKE VEGLIRKGYLKEYVDDLKATPNRENDNKSP REIRTI+
Sbjct: 121 RYCLFHRDHGHATLDCFDLKEEVEGLIRKGYLKEYVDDLKATPNRENDNKSPTREIRTIM 180
BLAST of Moc03g01340 vs. ExPASy TrEMBL
Match:
A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)
HSP 1 Score: 262.7 bits (670), Expect = 1.2e-66
Identity = 142/213 (66.67%), Postives = 159/213 (74.65%), Query Frame = 0
Query: 1 MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGR 60
+EGLTDAVSLLAFMSG++DEHL GEFF+SK+E +G+
Sbjct: 304 VEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGK 363
Query: 61 RADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWP 120
R D KRERS +KP S+WEKRDR QKD P KFEKYTPTTVP+EQVLMEIKDQ+LLKWP
Sbjct: 364 RTDPKRERSGDKPQGSRWEKRDR-SSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWP 423
Query: 121 ERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNREN 180
ERMKA KRSKGRYCL DHGH TQDCFDLKE VEGLIR+GYLKEYV++ KAT N E+
Sbjct: 424 ERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQNGES 483
Query: 181 DNKSPIREIRTIIGGSTEQESGRKRNTSVREAR 190
D KSP REIRTI+GG E+ESGRKR VREAR
Sbjct: 484 D-KSPAREIRTIMGGPIERESGRKRKADVREAR 514
BLAST of Moc03g01340 vs. ExPASy TrEMBL
Match:
A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)
HSP 1 Score: 253.8 bits (647), Expect = 5.6e-64
Identity = 139/213 (65.26%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 1 MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGR 60
+EGLTDAVSLLAF+ G++DEHL GEFF+SK+ES G+
Sbjct: 129 VEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSRAQRYMSAGEFFYSKRESNGK 188
Query: 61 RADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWP 120
R DQKRERS +KP S+WEKRDR QKD P KFEKYT TTVPLEQVLMEIK+Q+LLKWP
Sbjct: 189 RTDQKRERSGDKPQGSRWEKRDRSC-QKDPPQKFEKYTSTTVPLEQVLMEIKNQRLLKWP 248
Query: 121 ERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNREN 180
ERM A KRSKGRYCL DHGH TQDCFDLKE VEGLI +GYLKEYV++ KAT N E+
Sbjct: 249 ERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLILRGYLKEYVEEPKATQNGES 308
Query: 181 DNKSPIREIRTIIGGSTEQESGRKRNTSVREAR 190
D KSP REIRTI+GG E+ESGRKR VREAR
Sbjct: 309 D-KSPAREIRTIMGGPIERESGRKRKPDVREAR 339
BLAST of Moc03g01340 vs. ExPASy TrEMBL
Match:
A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)
HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63
Identity = 137/213 (64.32%), Postives = 155/213 (72.77%), Query Frame = 0
Query: 1 MEGLTDAVSLLAFMSGIKDEHL------------------------PGEFFHSKKESEGR 60
+E LTD VSLLAFMSG++DEHL GEFF+SK+E +G+
Sbjct: 88 IESLTDVVSLLAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKREPDGK 147
Query: 61 RADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQVLMEIKDQKLLKWP 120
R DQKRERS +KP S+WEKRDR QKD P KFEKYTPTTVPLEQVLMEIKDQ+LLKWP
Sbjct: 148 RTDQKRERSGDKPQGSRWEKRDR-SSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWP 207
Query: 121 ERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKEYVDDLKATPNREN 180
ERMK P KRSKGRYCL DH H TQD FDLKE VEGLIR+GYL+EYV++ KAT N E+
Sbjct: 208 ERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKATQNGES 267
Query: 181 DNKSPIREIRTIIGGSTEQESGRKRNTSVREAR 190
+ KSP REIRTI+GG E+ES RKR VREAR
Sbjct: 268 E-KSPAREIRTIMGGPIERESARKRKADVREAR 298
BLAST of Moc03g01340 vs. ExPASy TrEMBL
Match:
A0A6J1CQU1 (uncharacterized protein LOC111013355 OS=Momordica charantia OX=3673 GN=LOC111013355 PE=4 SV=1)
HSP 1 Score: 189.5 bits (480), Expect = 1.3e-44
Identity = 106/169 (62.72%), Postives = 122/169 (72.19%), Query Frame = 0
Query: 24 GEFFHSKKESEGRRADQKRERSREKPLSSKWEKRDRVVGQKDLPMKFEKYTPTTVPLEQV 83
GEFFHSKK+ EG+ +DQK ERSR+KP S+WEKRDR QKD P KF+KYTPTTVPL QV
Sbjct: 4 GEFFHSKKKPEGKWSDQKSERSRDKPHESRWEKRDR-TSQKDPPRKFKKYTPTTVPLGQV 63
Query: 84 LMEIKDQKLLKWPERMKAPPNKRSKGRYCLLQIDHGHVTQDCFDLKEVVEGLIRKGYLKE 143
+M+IKDQ+LLK ERMK P N CFDLKE VEGLIR+GYLKE
Sbjct: 64 VMDIKDQRLLKSLERMKTPLN--------------------CFDLKEEVEGLIRRGYLKE 123
Query: 144 YVDDLKATPNRENDNKSPIREIRTIIGGSTEQESGRKRNTSVREARMGL 193
YV+D KAT N +ND+KSP REIRTI+GG E+E GRKRN S+RE R L
Sbjct: 124 YVEDPKATQNGDNDSKSPAREIRTIMGGPVEREFGRKRNASMRETRASL 151
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DZ52 | 2.9e-76 | 77.23 | uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1DWY0 | 1.2e-66 | 66.67 | uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1CNT2 | 5.6e-64 | 65.26 | uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A6J1DYL6 | 1.6e-63 | 64.32 | uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1CQU1 | 1.3e-44 | 62.72 | uncharacterized protein LOC111013355 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
Match Name | E-value | Identity | Description | |