Moc03g01280 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g01280
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RING-H2 finger protein ATL63-like
Location	chr3: 985847 .. 986584 (-)
RNA-Seq Expression	Moc03g01280
Synteny	Moc03g01280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCGTCTCGAGTTCACTCACCGAGTTCGCTCAGAGCATTTTCTCCTACAACACCAACATCATGCTCGCCGCCCTCATTTCTCTCCTTCTCGTCGTCCTCTTCGTCCTCCTCCTCCACGCCTACGCCAAATGCTTCTTCCCCCACCCCCGCCCCCGCCGCCGCCGCACCCGCCGGAGCTCCGTCGCCGTCTCCTACCTCCTCCACCCCTCCCGCCTCTCTCTCTTCGACCTCGCCGGCGCTCCCCCATCCAAGGGCCTCGACCCCGCCGCAATCTCCAAGATTCCTCTGTTCGTTTACGGATCGGAGACGCCGCGTGCGGCGGCGCCGATGGAGGAGTGCGCCATTTGCTTGAGCGAATTCGAGGACCGGGAGCTCGGTCGCCGCCTCCCCAAATGCAGCCATGGATTCCACCTCGAGTGTATCGATATGTGGCTCGATTCGCACGCCAATTGCCCTGTTTGTAGAGCTCCGGTGGTCTGCGACGCCGCGAATTGTCCCGACGCGGCGGAATCCGGACGCGCTGGGGGAATTGGACCGGAAACGGACCGGAATTGTGAGATTCAGAGCAATGAGGGGCAAAATGGTCAATCTCTTCCTTCTTCTTCTTCTTCGAGTTCTTCGTTTGATCCGCCATTGATGTCGCTTGGAGCATCTCTGAAGCGAATGCTGAGCAAGAACGTATCAGAGGGGAGGATCTTCCCCTCCTCCAATGGCGTCGAATTGGATGTTTGA

mRNA sequence

ATGGCGTCCGTCTCGAGTTCACTCACCGAGTTCGCTCAGAGCATTTTCTCCTACAACACCAACATCATGCTCGCCGCCCTCATTTCTCTCCTTCTCGTCGTCCTCTTCGTCCTCCTCCTCCACGCCTACGCCAAATGCTTCTTCCCCCACCCCCGCCCCCGCCGCCGCCGCACCCGCCGGAGCTCCGTCGCCGTCTCCTACCTCCTCCACCCCTCCCGCCTCTCTCTCTTCGACCTCGCCGGCGCTCCCCCATCCAAGGGCCTCGACCCCGCCGCAATCTCCAAGATTCCTCTGTTCGTTTACGGATCGGAGACGCCGCGTGCGGCGGCGCCGATGGAGGAGTGCGCCATTTGCTTGAGCGAATTCGAGGACCGGGAGCTCGGTCGCCGCCTCCCCAAATGCAGCCATGGATTCCACCTCGAGTGTATCGATATGTGGCTCGATTCGCACGCCAATTGCCCTGTTTGTAGAGCTCCGGTGGTCTGCGACGCCGCGAATTGTCCCGACGCGGCGGAATCCGGACGCGCTGGGGGAATTGGACCGGAAACGGACCGGAATTGTGAGATTCAGAGCAATGAGGGGCAAAATGGTCAATCTCTTCCTTCTTCTTCTTCTTCGAGTTCTTCGTTTGATCCGCCATTGATGTCGCTTGGAGCATCTCTGAAGCGAATGCTGAGCAAGAACGTATCAGAGGGGAGGATCTTCCCCTCCTCCAATGGCGTCGAATTGGATGTTTGA

Coding sequence (CDS)

ATGGCGTCCGTCTCGAGTTCACTCACCGAGTTCGCTCAGAGCATTTTCTCCTACAACACCAACATCATGCTCGCCGCCCTCATTTCTCTCCTTCTCGTCGTCCTCTTCGTCCTCCTCCTCCACGCCTACGCCAAATGCTTCTTCCCCCACCCCCGCCCCCGCCGCCGCCGCACCCGCCGGAGCTCCGTCGCCGTCTCCTACCTCCTCCACCCCTCCCGCCTCTCTCTCTTCGACCTCGCCGGCGCTCCCCCATCCAAGGGCCTCGACCCCGCCGCAATCTCCAAGATTCCTCTGTTCGTTTACGGATCGGAGACGCCGCGTGCGGCGGCGCCGATGGAGGAGTGCGCCATTTGCTTGAGCGAATTCGAGGACCGGGAGCTCGGTCGCCGCCTCCCCAAATGCAGCCATGGATTCCACCTCGAGTGTATCGATATGTGGCTCGATTCGCACGCCAATTGCCCTGTTTGTAGAGCTCCGGTGGTCTGCGACGCCGCGAATTGTCCCGACGCGGCGGAATCCGGACGCGCTGGGGGAATTGGACCGGAAACGGACCGGAATTGTGAGATTCAGAGCAATGAGGGGCAAAATGGTCAATCTCTTCCTTCTTCTTCTTCTTCGAGTTCTTCGTTTGATCCGCCATTGATGTCGCTTGGAGCATCTCTGAAGCGAATGCTGAGCAAGAACGTATCAGAGGGGAGGATCTTCCCCTCCTCCAATGGCGTCGAATTGGATGTTTGA

Protein sequence

MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRRSSVAVSYLLHPSRLSLFDLAGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECAICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSNEGQNGQSLPSSSSSSSSFDPPLMSLGASLKRMLSKNVSEGRIFPSSNGVELDV

Homology

[Close]

BLAST of Moc03g01280 vs. NCBI nr
Match: XP_038895413.1 (RING-H2 finger protein ATL63 [Benincasa hispida])

HSP 1 Score: 316.6 bits (810), Expect = 1.9e-82
Identity = 183/257 (71.21%), Postives = 201/257 (78.21%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRR 60
           M S S+SL +FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFFPHPR R R   R
Sbjct: 1   MGSNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRYRHR--HR 60

Query: 61  SSVAVSYLLHPSRLSLFDLA-----GAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEEC 120
           +S+ VSY+L P RLS FD +      + PSKGLDP+ IS IPLFVY SE  + AA M EC
Sbjct: 61  TSLTVSYILAPPRLSRFDSSVPFDLVSAPSKGLDPSVISAIPLFVYESEEKKCAAAM-EC 120

Query: 121 AICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESG- 180
            ICLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHANCPVCR PV+ +AA+C DAAESG 
Sbjct: 121 VICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCREPVIGEAADCSDAAESGE 180

Query: 181 -RAGG----IGPETDRNCEIQSNEGQNGQSLPSSSSSSSSFDPPLMSLGASLKRMLSKNV 240
              GG    +  E   NCEIQ NEGQNGQ   S SSSSSS DPPLMSLGASL RMLS+N 
Sbjct: 181 REIGGEIVNVMEERSNNCEIQRNEGQNGQ-FNSDSSSSSSIDPPLMSLGASLMRMLSRNR 240

Query: 241 SEGRIFPSSNG-VELDV 246
           S+GRIFPSSNG  ELDV
Sbjct: 241 SDGRIFPSSNGEEELDV 253

[Close]

BLAST of Moc03g01280 vs. NCBI nr
Match: XP_023519269.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.8 bits (800), Expect = 2.7e-81
Identity = 184/269 (68.40%), Postives = 200/269 (74.35%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRR 60
           MA  S+SL  FAQS+FSYN+NIMLAALISLLLVVLFVLLLHAYA CFFP P     R RR
Sbjct: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQP-----RHRR 60

Query: 61  SSVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECA 120
           +SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE  + AA M EC 
Sbjct: 61  TSVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVM-ECV 120

Query: 121 ICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRA 180
           ICLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DA +C DA ESGR 
Sbjct: 121 ICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRL 180

Query: 181 GG-------IGPETDRNCEIQSNEGQNGQ-------------SLPSSSSSSSSFDPPLMS 240
            G       I  E  RNCEIQ NEGQNGQ             S  S SSSSSS D PLMS
Sbjct: 181 SGEREIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMS 240

Query: 241 LGASLKRMLSKNVSEGRIFPSSNGVELDV 246
           LGASLKRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 LGASLKRMLSRNRSDGRIFPSSDGDELDV 263

[Close]

BLAST of Moc03g01280 vs. NCBI nr
Match: XP_022964854.1 (RING-H2 finger protein ATL63-like [Cucurbita moschata])

HSP 1 Score: 312.8 bits (800), Expect = 2.7e-81
Identity = 186/274 (67.88%), Postives = 201/274 (73.36%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRR 60
           MA  S+SL  FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFFP P     R RR
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQP-----RHRR 60

Query: 61  SSVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECA 120
           +SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE  + AA M EC 
Sbjct: 61  TSVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVM-ECV 120

Query: 121 ICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRA 180
           ICLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DAA+C DA ESGR 
Sbjct: 121 ICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRL 180

Query: 181 GG-------IGPETDRNCEIQSNEGQNGQ------------------SLPSSSSSSSSFD 240
            G       I  E  RNCEIQ NEGQNGQ                  S  S SSSSSS D
Sbjct: 181 SGEREIGGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTD 240

Query: 241 PPLMSLGASLKRMLSKNVSEGRIFPSSNGVELDV 246
            PLMSLGASLKRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 QPLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 268

[Close]

BLAST of Moc03g01280 vs. NCBI nr
Match: XP_022970592.1 (RING-H2 finger protein ATL63-like [Cucurbita maxima])

HSP 1 Score: 312.4 bits (799), Expect = 3.5e-81
Identity = 184/265 (69.43%), Postives = 199/265 (75.09%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRR 60
           MA  S+SL  FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFFP P     R RR
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQP-----RHRR 60

Query: 61  SSVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECA 120
           +SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE  +  A M EC 
Sbjct: 61  TSVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVM-ECV 120

Query: 121 ICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRA 180
           ICLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DAA+C DA ESGR 
Sbjct: 121 ICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRL 180

Query: 181 GG-------IGPETDRNCEIQSNEGQNGQ---------SLPSSSSSSSSFDPPLMSLGAS 240
            G       I  E   NCEIQ NEGQNGQ         S  S SSSSSS D PLMSLGAS
Sbjct: 181 SGEREIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGAS 240

Query: 241 LKRMLSKNVSEGRIFPSSNGVELDV 246
           LKRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 LKRMLSRNRSDGRIFPSSDGDELDV 259

[Close]

BLAST of Moc03g01280 vs. NCBI nr
Match: KAG6583350.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.5 bits (789), Expect = 5.1e-80
Identity = 185/278 (66.55%), Postives = 200/278 (71.94%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRR 60
           MA  S+SL  FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFFP P     R RR
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQP-----RHRR 60

Query: 61  SSVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECA 120
           +SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE  + AA M EC 
Sbjct: 61  TSVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVM-ECV 120

Query: 121 ICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRA 180
           ICLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DAA+C DA ES R 
Sbjct: 121 ICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESDRL 180

Query: 181 GG-------IGPETDRNCEIQSNEGQNGQ----------------------SLPSSSSSS 240
            G       I  E  RNCEIQ NEGQNGQ                      S  S SSSS
Sbjct: 181 SGEREIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSSSSSSSSSSLSSSS 240

Query: 241 SSFDPPLMSLGASLKRMLSKNVSEGRIFPSSNGVELDV 246
           SS D PLMSLGASLKRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 SSTDQPLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 272

[Close]

BLAST of Moc03g01280 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.3e-33
Identity = 84/176 (47.73%), Postives = 108/176 (61.36%), Query Frame = 0


Query: 3   SVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFF----------PHPR 62
           SV SSL+ F + + SYN+N++LAAL+ LLLVVLFVLLLH YA+ F+             R
Sbjct: 10  SVKSSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHR 69

Query: 63  PRRRRTRRSSVAVSYLLHPSRLSLFDLAGAPPS-------KGLDPAAISKIPLFVYGSET 122
            RRRR RR +V  + ++    L  FD   + P+       KGLD + IS IPLFVY  E 
Sbjct: 70  RRRRRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVY-EEN 129

Query: 123 PRAAAPMEECAICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVV 162
                  EEC ICL  +E  + GR+L  C HGFH+ECIDMWL SH+ CP+CR+PV+
Sbjct: 130 EEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVL 184

[Close]

BLAST of Moc03g01280 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-26
Identity = 62/145 (42.76%), Postives = 86/145 (59.31%), Query Frame = 0


Query: 16  FSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRRSSVAVSYLLHPSRLS 75
           ++ N  IML+++I L + V+ +L  H+YA+  F   R   RR RR            R  
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF---RRHNRRIRRR----------IRSH 81

Query: 76  LFDLAGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECAICLSEFEDRELGRRLPKCS 135
           L  L+ +P  + LD A + KIP+FVY S+ P      EEC++CLSEFE+ + GR LPKC 
Sbjct: 82  LRTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCG 141

Query: 136 HGFHLECIDMWLDSHANCPVCRAPV 161
           H FH++CID W  S + CP+CRAPV
Sbjct: 142 HSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of Moc03g01280 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-24
Identity = 75/194 (38.66%), Postives = 105/194 (54.12%), Query Frame = 0


Query: 14  SIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRRSSVAVSYLLHPSR 73
           S +S N  IMLA++I L + V+ +L  H+YA+  F   R + RR RR   A    L  +R
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLF---RRQNRRIRRRISAHLRSLAAAR 79

Query: 74  LSLFDLAGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECAICLSEFEDRELGRRLPK 133
                 +   P   LDP  + KIP+FVY  +T    +P+EEC++CLSEFE+ + GR LPK
Sbjct: 80  DPTQSSSSLSP---LDPTVLEKIPIFVYSVKTHE--SPLEECSVCLSEFEEDDEGRVLPK 139

Query: 134 CSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSNE 193
           C H FH++CID W  S ++CP+CRAPV            +     + P  D      S+ 
Sbjct: 140 CGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSS 199

Query: 194 GQNGQSLPSSSSSS 208
            ++  S PSSSS S
Sbjct: 200 DESESSTPSSSSGS 205

[Close]

BLAST of Moc03g01280 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 3.5e-23
Identity = 73/195 (37.44%), Postives = 105/195 (53.85%), Query Frame = 0


Query: 16  FSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPR--RRRTR-RSSVAVSYLLHPS 75
           ++ +  IML+A++ L  VV+ ++ LH YA+ +    R R  RRR+R R +  V +   PS
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  RLSLFDLAGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECAICLSEFEDRELGRRLP 135
             +   +A    S+GLDP  I  +P+F +  ET +      ECA+CLSEFE+ E GR LP
Sbjct: 84  TAATSVVA----SRGLDPNVIKSLPVFTFSDETHKDPI---ECAVCLSEFEESETGRVLP 143

Query: 136 KCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSN 195
            C H FH++CIDMW  SH+ CP+CR+ V   A     AA   R   I  ++D    I+ +
Sbjct: 144 NCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPS 203

Query: 196 EGQNGQSLPSSSSSS 208
                   P  S SS
Sbjct: 204 SSSGLTDEPHGSGSS 211

[Close]

BLAST of Moc03g01280 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.0e-18
Identity = 73/221 (33.03%), Postives = 109/221 (49.32%), Query Frame = 0


Query: 14  SIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRRSSVAVSYLLHPSR 73
           S +  N+ IMLAA+ SL  V+L V  LH YA+        RRRR     + V +  HP  
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL-----RRRREAFRGLPVIF-RHPFE 82

Query: 74  LSLFDLAGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECAICLSEFEDRELGRRLPK 133
           +         P +GL+P  I+ +P F  G+ T   AA   ECA+CLS  ++++  R LP 
Sbjct: 83  M---------PKRGLNPTVIASLPTFTVGA-TDGVAASATECAVCLSVLKEQDKARELPN 142

Query: 134 CSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSNE 193
           C H FH++C+D WL + + CPVCR  V       P      R G +G  T     +++  
Sbjct: 143 CKHIFHVDCVDTWLTTCSTCPVCRTEV----EPRPRLEPEPREGPVG--TAPQLLVETRL 202

Query: 194 GQNGQSLPSSSSSSSSFDPPLMSLGASLKRMLSKNVSEGRI 235
               ++  SSSS + +   P   L  S +++L++  S  RI
Sbjct: 203 NLTVEAASSSSSDNKTVVSPASRLN-SFRKILTRERSSNRI 220

[Close]

BLAST of Moc03g01280 vs. ExPASy TrEMBL
Match: A0A6J1HPE0 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.3e-81
Identity = 186/274 (67.88%), Postives = 201/274 (73.36%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRR 60
           MA  S+SL  FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFFP P     R RR
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQP-----RHRR 60

Query: 61  SSVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECA 120
           +SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE  + AA M EC 
Sbjct: 61  TSVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVM-ECV 120

Query: 121 ICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRA 180
           ICLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DAA+C DA ESGR 
Sbjct: 121 ICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRL 180

Query: 181 GG-------IGPETDRNCEIQSNEGQNGQ------------------SLPSSSSSSSSFD 240
            G       I  E  RNCEIQ NEGQNGQ                  S  S SSSSSS D
Sbjct: 181 SGEREIGGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTD 240

Query: 241 PPLMSLGASLKRMLSKNVSEGRIFPSSNGVELDV 246
            PLMSLGASLKRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 QPLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 268

[Close]

BLAST of Moc03g01280 vs. ExPASy TrEMBL
Match: A0A6J1HZJ3 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.7e-81
Identity = 184/265 (69.43%), Postives = 199/265 (75.09%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRR 60
           MA  S+SL  FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFFP P     R RR
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQP-----RHRR 60

Query: 61  SSVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECA 120
           +SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE  +  A M EC 
Sbjct: 61  TSVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVM-ECV 120

Query: 121 ICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRA 180
           ICLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DAA+C DA ESGR 
Sbjct: 121 ICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRL 180

Query: 181 GG-------IGPETDRNCEIQSNEGQNGQ---------SLPSSSSSSSSFDPPLMSLGAS 240
            G       I  E   NCEIQ NEGQNGQ         S  S SSSSSS D PLMSLGAS
Sbjct: 181 SGEREIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGAS 240

Query: 241 LKRMLSKNVSEGRIFPSSNGVELDV 246
           LKRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 LKRMLSRNRSDGRIFPSSDGDELDV 259

[Close]

BLAST of Moc03g01280 vs. ExPASy TrEMBL
Match: A0A1S3C6K6 (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 6.7e-78
Identity = 175/250 (70.00%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 2   ASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRRS 61
           +S S+SLT+FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFFPHPR R    RR+
Sbjct: 3   SSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHR----RRT 62

Query: 62  SVAVSYLLHPSRLSLFDLA-----GAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECA 121
           SV VSY+L P RLS FD       G+ PSKGLDP+ IS IPLFVY SE  + AA M EC 
Sbjct: 63  SVTVSYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATM-ECV 122

Query: 122 ICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRA 181
           ICLSEFE+RELGRRLPKC HGFHLECIDMWL+SHANCPVCR PV+ +A +C DAAESG  
Sbjct: 123 ICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGE- 182

Query: 182 GGIGPETDRNCEIQSNEGQNGQSLPSSSSSSSSFDPPLM-SLGASLKRMLSKNVSEGRIF 241
           G IG ET        NEGQ+GQ    SSSSSS   PPLM S+GASL R+LS+N S+GRIF
Sbjct: 183 GEIGRET-------VNEGQSGQFNSDSSSSSSIDPPPLMSSIGASLIRILSRNRSDGRIF 239

Query: 242 PSSNGVELDV 246
           PSSNG ELDV
Sbjct: 243 PSSNGEELDV 239

[Close]

BLAST of Moc03g01280 vs. ExPASy TrEMBL
Match: A0A5A7UXS2 (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00740 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 6.7e-78
Identity = 175/250 (70.00%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 2   ASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRRS 61
           +S S+SLT+FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFFPHPR R    RR+
Sbjct: 3   SSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHR----RRT 62

Query: 62  SVAVSYLLHPSRLSLFDLA-----GAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECA 121
           SV VSY+L P RLS FD       G+ PSKGLDP+ IS IPLFVY SE  + AA M EC 
Sbjct: 63  SVTVSYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAAAM-ECV 122

Query: 122 ICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRA 181
           ICLSEFE+RELGRRLPKC HGFHLECIDMWL+SHANCPVCR PV+ +A +C DAAESG  
Sbjct: 123 ICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGE- 182

Query: 182 GGIGPETDRNCEIQSNEGQNGQSLPSSSSSSSSFDPPLM-SLGASLKRMLSKNVSEGRIF 241
           G IG ET        NEGQ+GQ    SSSSSS   PPLM S+GASL R+LS+N S+GRIF
Sbjct: 183 GEIGRET-------VNEGQSGQFNSDSSSSSSIDPPPLMSSIGASLIRILSRNRSDGRIF 239

Query: 242 PSSNGVELDV 246
           PSSNG ELDV
Sbjct: 243 PSSNGEELDV 239

[Close]

BLAST of Moc03g01280 vs. ExPASy TrEMBL
Match: A0A5D3BFR6 (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00790 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.1e-77
Identity = 177/260 (68.08%), Postives = 197/260 (75.77%), Query Frame = 0


Query: 2   ASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRRS 61
           +S S+SLT+FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFFPHPR R    RR+
Sbjct: 3   SSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHR----RRT 62

Query: 62  SVAVSYLLHPSRLSLFDLA-----GAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECA 121
           SV VSY+L P RLS FD       G+ PSKGLDP+ IS IPLFVY SE  + AA M EC 
Sbjct: 63  SVTVSYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATM-ECV 122

Query: 122 ICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRA 181
           ICLSEFE+RELGRRLPKC HGFHLECIDMWL+SHANCPVCR PV+ +A +C DAAESG  
Sbjct: 123 ICLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGE- 182

Query: 182 GGIGPETDRNCEIQSNEGQNGQ---------SLPSSSSSSSSFDPP--LMSLGASLKRML 241
           G IG ET        NEGQ+GQ         S  SSSSSSSS DPP  + S+GASL R+L
Sbjct: 183 GEIGRET-------VNEGQSGQFNSDSSSSSSSSSSSSSSSSIDPPPLMSSIGASLIRIL 242

Query: 242 SKNVSEGRIFPSSNGVELDV 246
           S+N S+GRIFPSSNG ELDV
Sbjct: 243 SRNRSDGRIFPSSNGEELDV 249

[Close]

BLAST of Moc03g01280 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 144.8 bits (364), Expect = 9.0e-35
Identity = 84/176 (47.73%), Postives = 108/176 (61.36%), Query Frame = 0


Query: 3   SVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFF----------PHPR 62
           SV SSL+ F + + SYN+N++LAAL+ LLLVVLFVLLLH YA+ F+             R
Sbjct: 10  SVKSSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHR 69

Query: 63  PRRRRTRRSSVAVSYLLHPSRLSLFDLAGAPPS-------KGLDPAAISKIPLFVYGSET 122
            RRRR RR +V  + ++    L  FD   + P+       KGLD + IS IPLFVY  E 
Sbjct: 70  RRRRRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVY-EEN 129

Query: 123 PRAAAPMEECAICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVV 162
                  EEC ICL  +E  + GR+L  C HGFH+ECIDMWL SH+ CP+CR+PV+
Sbjct: 130 EEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVL 184

[Close]

BLAST of Moc03g01280 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-27
Identity = 62/145 (42.76%), Postives = 86/145 (59.31%), Query Frame = 0


Query: 16  FSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRRSSVAVSYLLHPSRLS 75
           ++ N  IML+++I L + V+ +L  H+YA+  F   R   RR RR            R  
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF---RRHNRRIRRR----------IRSH 81

Query: 76  LFDLAGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECAICLSEFEDRELGRRLPKCS 135
           L  L+ +P  + LD A + KIP+FVY S+ P      EEC++CLSEFE+ + GR LPKC 
Sbjct: 82  LRTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCG 141

Query: 136 HGFHLECIDMWLDSHANCPVCRAPV 161
           H FH++CID W  S + CP+CRAPV
Sbjct: 142 HSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of Moc03g01280 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-25
Identity = 75/194 (38.66%), Postives = 105/194 (54.12%), Query Frame = 0


Query: 14  SIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRRSSVAVSYLLHPSR 73
           S +S N  IMLA++I L + V+ +L  H+YA+  F   R + RR RR   A    L  +R
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLF---RRQNRRIRRRISAHLRSLAAAR 79

Query: 74  LSLFDLAGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECAICLSEFEDRELGRRLPK 133
                 +   P   LDP  + KIP+FVY  +T    +P+EEC++CLSEFE+ + GR LPK
Sbjct: 80  DPTQSSSSLSP---LDPTVLEKIPIFVYSVKTHE--SPLEECSVCLSEFEEDDEGRVLPK 139

Query: 134 CSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSNE 193
           C H FH++CID W  S ++CP+CRAPV            +     + P  D      S+ 
Sbjct: 140 CGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSS 199

Query: 194 GQNGQSLPSSSSSS 208
            ++  S PSSSS S
Sbjct: 200 DESESSTPSSSSGS 205

[Close]

BLAST of Moc03g01280 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 110.2 bits (274), Expect = 2.5e-24
Identity = 73/195 (37.44%), Postives = 105/195 (53.85%), Query Frame = 0


Query: 16  FSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPR--RRRTR-RSSVAVSYLLHPS 75
           ++ +  IML+A++ L  VV+ ++ LH YA+ +    R R  RRR+R R +  V +   PS
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  RLSLFDLAGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECAICLSEFEDRELGRRLP 135
             +   +A    S+GLDP  I  +P+F +  ET +      ECA+CLSEFE+ E GR LP
Sbjct: 84  TAATSVVA----SRGLDPNVIKSLPVFTFSDETHKDPI---ECAVCLSEFEESETGRVLP 143

Query: 136 KCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSN 195
            C H FH++CIDMW  SH+ CP+CR+ V   A     AA   R   I  ++D    I+ +
Sbjct: 144 NCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPS 203

Query: 196 EGQNGQSLPSSSSSS 208
                   P  S SS
Sbjct: 204 SSSGLTDEPHGSGSS 211

[Close]

BLAST of Moc03g01280 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-19
Identity = 73/221 (33.03%), Postives = 109/221 (49.32%), Query Frame = 0


Query: 14  SIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPHPRPRRRRTRRSSVAVSYLLHPSR 73
           S +  N+ IMLAA+ SL  V+L V  LH YA+        RRRR     + V +  HP  
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL-----RRRREAFRGLPVIF-RHPFE 82

Query: 74  LSLFDLAGAPPSKGLDPAAISKIPLFVYGSETPRAAAPMEECAICLSEFEDRELGRRLPK 133
           +         P +GL+P  I+ +P F  G+ T   AA   ECA+CLS  ++++  R LP 
Sbjct: 83  M---------PKRGLNPTVIASLPTFTVGA-TDGVAASATECAVCLSVLKEQDKARELPN 142

Query: 134 CSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSNE 193
           C H FH++C+D WL + + CPVCR  V       P      R G +G  T     +++  
Sbjct: 143 CKHIFHVDCVDTWLTTCSTCPVCRTEV----EPRPRLEPEPREGPVG--TAPQLLVETRL 202

Query: 194 GQNGQSLPSSSSSSSSFDPPLMSLGASLKRMLSKNVSEGRI 235
               ++  SSSS + +   P   L  S +++L++  S  RI
Sbjct: 203 NLTVEAASSSSSDNKTVVSPASRLN-SFRKILTRERSSNRI 220

The following BLAST results are available for this feature:

BLAST of Moc03g01280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895413.1	1.9e-82	71.21	RING-H2 finger protein ATL63 [Benincasa hispida]	[more]
XP_023519269.1	2.7e-81	68.40	RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964854.1	2.7e-81	67.88	RING-H2 finger protein ATL63-like [Cucurbita moschata]	[more]
XP_022970592.1	3.5e-81	69.43	RING-H2 finger protein ATL63-like [Cucurbita maxima]	[more]
KAG6583350.1	5.1e-80	66.55	RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Moc03g01280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUZ9	1.3e-33	47.73	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]
O22255	2.6e-26	42.76	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9LZJ6	1.8e-24	38.66	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q8L9T5	3.5e-23	37.44	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9SLC3	2.0e-18	33.03	E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ...	[more]

BLAST of Moc03g01280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HPE0	1.3e-81	67.88	RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 ...	[more]
A0A6J1HZJ3	1.7e-81	69.43	RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE...	[more]
A0A1S3C6K6	6.7e-78	70.00	RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 ...	[more]
A0A5A7UXS2	6.7e-78	70.00	RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3BFR6	1.1e-77	68.08	RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Moc03g01280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58580.1	9.0e-35	47.73	TOXICOS EN LEVADURA 63	[more]
AT2G47560.1	1.8e-27	42.76	RING/U-box superfamily protein	[more]
AT3G62690.1	1.3e-25	38.66	AtL5	[more]
AT3G16720.1	2.5e-24	37.44	TOXICOS EN LEVADURA 2	[more]
AT2G42360.1	1.4e-19	33.03	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 115..156 e-value: 4.2E-7 score: 39.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 114..157 e-value: 3.7E-12 score: 46.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 115..157 score: 12.592549
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 89..165 e-value: 1.0E-20 score: 74.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..214
None	No IPR available	PANTHER	PTHR14155:SF514	CHROMATIN REGULATOR PHD FAMILY-RELATED	coord: 5..240
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 5..240
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 114..157 e-value: 1.11194E-18 score: 74.6539
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 114..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g01280.1	Moc03g01280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane