Moc03g00540 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g00540
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein NUCLEAR FUSION DEFECTIVE 4-like
Location	chr3: 381203 .. 381664 (-)
RNA-Seq Expression	Moc03g00540
Synteny	Moc03g00540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGGATGTGGAGGGCGGGGGCGGGGGCGGGGGCGGGGAGGATGGCGGCGCTGATGGTGGGGATGTGCGGCGGTTTCTTCCTTCTGTGGTGGCCAAGCAATGCGAGCCTGTGCGTGAGCACCGCCATTATTGCAGGGTGCACCGGCGCAATTACTTCCATTTCGGTCTCCACAACCACTCAGCTATTTGGGGCCAAAAATTTCTCCGTAAACCACAACCTGGTGGTCGCCAACATACCAATTGGGTCCTTTCTTTACGGCTACATGGCGGCGTTTCTGTACCACAGCCACCCTTCCGCCGCCGCCGGAAAATGCATGGGAGTTGAGTGCTACAGAACCACTTTCTTGATATGGGGTTGCTTGTGCTCCTTTGGAACTCTGCTCGCTCTCCTTTTGTTCCTTCGAACCAGAAGCTTCTACTCTGCAAAGCTGCACTCAGCTGAAGAAGATTCAACGTAG

mRNA sequence

ATGAGCAGGATGTGGAGGGCGGGGGCGGGGGCGGGGGCGGGGAGGATGGCGGCGCTGATGGTGGGGATGTGCGGCGGTTTCTTCCTTCTGTGGTGGCCAAGCAATGCGAGCCTGTGCGTGAGCACCGCCATTATTGCAGGGTGCACCGGCGCAATTACTTCCATTTCGGTCTCCACAACCACTCAGCTATTTGGGGCCAAAAATTTCTCCGTAAACCACAACCTGGTGGTCGCCAACATACCAATTGGGTCCTTTCTTTACGGCTACATGGCGGCGTTTCTGTACCACAGCCACCCTTCCGCCGCCGCCGGAAAATGCATGGGAGTTGAGTGCTACAGAACCACTTTCTTGATATGGGGTTGCTTGTGCTCCTTTGGAACTCTGCTCGCTCTCCTTTTGTTCCTTCGAACCAGAAGCTTCTACTCTGCAAAGCTGCACTCAGCTGAAGAAGATTCAACGTAG

Coding sequence (CDS)

ATGAGCAGGATGTGGAGGGCGGGGGCGGGGGCGGGGGCGGGGAGGATGGCGGCGCTGATGGTGGGGATGTGCGGCGGTTTCTTCCTTCTGTGGTGGCCAAGCAATGCGAGCCTGTGCGTGAGCACCGCCATTATTGCAGGGTGCACCGGCGCAATTACTTCCATTTCGGTCTCCACAACCACTCAGCTATTTGGGGCCAAAAATTTCTCCGTAAACCACAACCTGGTGGTCGCCAACATACCAATTGGGTCCTTTCTTTACGGCTACATGGCGGCGTTTCTGTACCACAGCCACCCTTCCGCCGCCGCCGGAAAATGCATGGGAGTTGAGTGCTACAGAACCACTTTCTTGATATGGGGTTGCTTGTGCTCCTTTGGAACTCTGCTCGCTCTCCTTTTGTTCCTTCGAACCAGAAGCTTCTACTCTGCAAAGCTGCACTCAGCTGAAGAAGATTCAACGTAG

Protein sequence

MSRMWRAGAGAGAGRMAALMVGMCGGFFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNHNLVVANIPIGSFLYGYMAAFLYHSHPSAAAGKCMGVECYRTTFLIWGCLCSFGTLLALLLFLRTRSFYSAKLHSAEEDST

Homology

[Close]

BLAST of Moc03g00540 vs. NCBI nr
Match: XP_022970645.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucurbita maxima])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 100/140 (71.43%), Postives = 115/140 (82.14%), Query Frame = 0


Query: 14  GRMAALMVGMCGGFFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNH 73
           G + ALM  MCGGFFLL  P++  LCVSTA+IA CTGAITSISVSTT++LFGA NFS+NH
Sbjct: 381 GWLVALMGAMCGGFFLLSGPTDLILCVSTAVIAVCTGAITSISVSTTSELFGANNFSINH 440

Query: 74  NLVVANIPIGSFLYGYMAAFLYHSHPSAAAGKCMGVECYRTTFLIWGCLCSFGTLLALLL 133
           N+VVANIP+GSFL+GYMAA+LY    +  AGKC+GVECYRTTF+IWGCLCSFGTLLALLL
Sbjct: 441 NVVVANIPVGSFLFGYMAAYLYRKQATGGAGKCIGVECYRTTFMIWGCLCSFGTLLALLL 500

Query: 134 FLRTRSFYSAKLHSAEEDST 154
           F RTRSFYS       + ST
Sbjct: 501 FARTRSFYSTTKSPRAQGST 520

[Close]

BLAST of Moc03g00540 vs. NCBI nr
Match: XP_022998130.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucurbita maxima])

HSP 1 Score: 198.4 bits (503), Expect = 4.6e-47
Identity = 98/137 (71.53%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 14  GRMAALMVGMCGGFFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNH 73
           G M AL+  MCGGFFLL WP++ SLC STAIIAGCTGAITSI+VS TT+LFGA NFS+NH
Sbjct: 357 GWMVALLGAMCGGFFLLLWPTDTSLCTSTAIIAGCTGAITSIAVSVTTELFGADNFSINH 416

Query: 74  NLVVANIPIGSFLYGYMAAFLYHSHPSAAAGKCMGVECYRTTFLIWGCLCSFGTLLALLL 133
           NLVVANIP+GSFL+G +A FLY +   A AGKC+GVECYR  FLIWGCLC  GTLLAL+L
Sbjct: 417 NLVVANIPLGSFLFGSLAGFLYRNQVPAGAGKCVGVECYRAVFLIWGCLCLVGTLLALVL 476

Query: 134 FLRTRSFYSAKLHSAEE 151
           F RTRSFYS K    E+
Sbjct: 477 FARTRSFYSTKRRMVED 493

[Close]

BLAST of Moc03g00540 vs. NCBI nr
Match: KAG7037031.1 (Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.7 bits (496), Expect = 3.0e-46
Identity = 97/137 (70.80%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 14  GRMAALMVGMCGGFFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNH 73
           G M AL+  MCGGFFLL WP++ SLC STAIIAGCTGAITSI+VS TT+LFGA NFS+NH
Sbjct: 363 GWMVALLGAMCGGFFLLLWPTDMSLCTSTAIIAGCTGAITSIAVSVTTELFGADNFSINH 422

Query: 74  NLVVANIPIGSFLYGYMAAFLYHSHPSAAAGKCMGVECYRTTFLIWGCLCSFGTLLALLL 133
           NLVVANIP+GSFL+G +A FLY     A AGKC+GVECYR  F IWGCLC  GTLLAL+L
Sbjct: 423 NLVVANIPLGSFLFGSLAGFLYRMQVPAGAGKCIGVECYRAVFFIWGCLCLVGTLLALVL 482

Query: 134 FLRTRSFYSAKLHSAEE 151
           F RTRSFYS K    E+
Sbjct: 483 FARTRSFYSTKRRMVED 499

[Close]

BLAST of Moc03g00540 vs. NCBI nr
Match: XP_022949166.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucurbita moschata])

HSP 1 Score: 195.7 bits (496), Expect = 3.0e-46
Identity = 97/137 (70.80%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 14  GRMAALMVGMCGGFFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNH 73
           G M AL+  MCGGFFLL WP++ SLC STAIIAGCTGAITSI+VS TT+LFGA NFS+NH
Sbjct: 357 GWMVALLGAMCGGFFLLLWPTDMSLCTSTAIIAGCTGAITSIAVSVTTELFGADNFSINH 416

Query: 74  NLVVANIPIGSFLYGYMAAFLYHSHPSAAAGKCMGVECYRTTFLIWGCLCSFGTLLALLL 133
           NLVVANIP+GSFL+G +A FLY     A AGKC+GVECYR  F IWGCLC  GTLLAL+L
Sbjct: 417 NLVVANIPLGSFLFGSLAGFLYRMQVPAGAGKCIGVECYRAVFFIWGCLCLVGTLLALVL 476

Query: 134 FLRTRSFYSAKLHSAEE 151
           F RTRSFYS K    E+
Sbjct: 477 FARTRSFYSTKRRMVED 493

[Close]

BLAST of Moc03g00540 vs. NCBI nr
Match: KAG6607357.1 (Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195.7 bits (496), Expect = 3.0e-46
Identity = 97/137 (70.80%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 14  GRMAALMVGMCGGFFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNH 73
           G M AL+  MCGGFFLL WP++ SLC STAIIAGCTGAITSI+VS TT+LFGA NFS+NH
Sbjct: 363 GWMVALLGAMCGGFFLLLWPTDMSLCTSTAIIAGCTGAITSIAVSVTTELFGADNFSINH 422

Query: 74  NLVVANIPIGSFLYGYMAAFLYHSHPSAAAGKCMGVECYRTTFLIWGCLCSFGTLLALLL 133
           NLVVANIP+GSFL+G +A FLY     A AGKC+GVECYR  F IWGCLC  GTLLAL+L
Sbjct: 423 NLVVANIPLGSFLFGSLAGFLYRMQVPAGAGKCIGVECYRAVFFIWGCLCLVGTLLALVL 482

Query: 134 FLRTRSFYSAKLHSAEE 151
           F RTRSFYS K    E+
Sbjct: 483 FARTRSFYSTKRRMVED 499

[Close]

BLAST of Moc03g00540 vs. ExPASy Swiss-Prot
Match: F4I9E1 (Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=NFD4 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.3e-17
Identity = 54/134 (40.30%), Postives = 81/134 (60.45%), Query Frame = 0


Query: 27  FFLLWWPSN--ASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNHNLVVANIPIGS 86
           FFLL   S+   +L  +TA+I   +G I + +VS T+ LFG  +  VNHN+++ NIPIGS
Sbjct: 439 FFLLAVSSSQQTALQTATALIGLSSGFIFAAAVSITSDLFGPNSVGVNHNILITNIPIGS 498

Query: 87  FLYGYMAAFLYHSHPS-------AAAGKCMGVECYRTTFLIWGCLCSFGTLLALLLFLRT 146
            LYGY+AA +Y ++ S       + +  C+G +CY  TF+ WGCL   G + +L L++RT
Sbjct: 499 LLYGYIAASIYEANASPDITPIVSDSIVCIGRDCYFKTFVFWGCLSILGVVSSLSLYIRT 558

Query: 147 RSFYSAKLHSAEED 152
           +  Y    H  E+D
Sbjct: 559 KPVY----HRLEQD 568

[Close]

BLAST of Moc03g00540 vs. ExPASy TrEMBL
Match: A0A6J1I3F0 (protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111469568 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.9e-48
Identity = 100/140 (71.43%), Postives = 115/140 (82.14%), Query Frame = 0


Query: 14  GRMAALMVGMCGGFFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNH 73
           G + ALM  MCGGFFLL  P++  LCVSTA+IA CTGAITSISVSTT++LFGA NFS+NH
Sbjct: 381 GWLVALMGAMCGGFFLLSGPTDLILCVSTAVIAVCTGAITSISVSTTSELFGANNFSINH 440

Query: 74  NLVVANIPIGSFLYGYMAAFLYHSHPSAAAGKCMGVECYRTTFLIWGCLCSFGTLLALLL 133
           N+VVANIP+GSFL+GYMAA+LY    +  AGKC+GVECYRTTF+IWGCLCSFGTLLALLL
Sbjct: 441 NVVVANIPVGSFLFGYMAAYLYRKQATGGAGKCIGVECYRTTFMIWGCLCSFGTLLALLL 500

Query: 134 FLRTRSFYSAKLHSAEEDST 154
           F RTRSFYS       + ST
Sbjct: 501 FARTRSFYSTTKSPRAQGST 520

[Close]

BLAST of Moc03g00540 vs. ExPASy TrEMBL
Match: A0A6J1KBR5 (protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492867 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.2e-47
Identity = 98/137 (71.53%), Postives = 111/137 (81.02%), Query Frame = 0


Query: 14  GRMAALMVGMCGGFFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNH 73
           G M AL+  MCGGFFLL WP++ SLC STAIIAGCTGAITSI+VS TT+LFGA NFS+NH
Sbjct: 357 GWMVALLGAMCGGFFLLLWPTDTSLCTSTAIIAGCTGAITSIAVSVTTELFGADNFSINH 416

Query: 74  NLVVANIPIGSFLYGYMAAFLYHSHPSAAAGKCMGVECYRTTFLIWGCLCSFGTLLALLL 133
           NLVVANIP+GSFL+G +A FLY +   A AGKC+GVECYR  FLIWGCLC  GTLLAL+L
Sbjct: 417 NLVVANIPLGSFLFGSLAGFLYRNQVPAGAGKCVGVECYRAVFLIWGCLCLVGTLLALVL 476

Query: 134 FLRTRSFYSAKLHSAEE 151
           F RTRSFYS K    E+
Sbjct: 477 FARTRSFYSTKRRMVED 493

[Close]

BLAST of Moc03g00540 vs. ExPASy TrEMBL
Match: A0A6J1GB93 (protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111452597 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.4e-46
Identity = 97/137 (70.80%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 14  GRMAALMVGMCGGFFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNH 73
           G M AL+  MCGGFFLL WP++ SLC STAIIAGCTGAITSI+VS TT+LFGA NFS+NH
Sbjct: 357 GWMVALLGAMCGGFFLLLWPTDMSLCTSTAIIAGCTGAITSIAVSVTTELFGADNFSINH 416

Query: 74  NLVVANIPIGSFLYGYMAAFLYHSHPSAAAGKCMGVECYRTTFLIWGCLCSFGTLLALLL 133
           NLVVANIP+GSFL+G +A FLY     A AGKC+GVECYR  F IWGCLC  GTLLAL+L
Sbjct: 417 NLVVANIPLGSFLFGSLAGFLYRMQVPAGAGKCIGVECYRAVFFIWGCLCLVGTLLALVL 476

Query: 134 FLRTRSFYSAKLHSAEE 151
           F RTRSFYS K    E+
Sbjct: 477 FARTRSFYSTKRRMVED 493

[Close]

BLAST of Moc03g00540 vs. ExPASy TrEMBL
Match: A0A1S3C569 (protein NUCLEAR FUSION DEFECTIVE 4 OS=Cucumis melo OX=3656 GN=LOC103497028 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45
Identity = 100/131 (76.34%), Postives = 108/131 (82.44%), Query Frame = 0


Query: 14  GRMAALMVGMCGGFFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNH 73
           G M  LM  +CGGFFLL  PS+ SLC+STAIIA CTGAITSISVSTTT LFGA NFS+NH
Sbjct: 390 GWMVGLMGALCGGFFLLLSPSDTSLCMSTAIIAICTGAITSISVSTTTDLFGATNFSINH 449

Query: 74  NLVVANIPIGSFLYGYMAAFLYHSHP--SAAAGKCMGVECYRTTFLIWGCLCSFGTLLAL 133
           N+VVANIP GSF++GYMAAFLYH       AAGKC+GVECYRTTFLIWGC  SFGT LAL
Sbjct: 450 NVVVANIPFGSFIFGYMAAFLYHKQAGHGVAAGKCIGVECYRTTFLIWGCFSSFGTFLAL 509

Query: 134 LLFLRTRSFYS 143
           LLF RTRSFYS
Sbjct: 510 LLFARTRSFYS 520

[Close]

BLAST of Moc03g00540 vs. ExPASy TrEMBL
Match: A0A6J1HMC6 (protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111464885 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.9e-45
Identity = 98/141 (69.50%), Postives = 112/141 (79.43%), Query Frame = 0


Query: 14  GRMAALMVGMCGG-FFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVN 73
           G + ALM  MCGG FFLL  P++  LCVSTA+IA CTGAITSISVSTT++LFGA NFS+N
Sbjct: 435 GWLVALMGAMCGGFFFLLSGPTDLILCVSTAVIAVCTGAITSISVSTTSELFGANNFSIN 494

Query: 74  HNLVVANIPIGSFLYGYMAAFLYHSHPSAAAGKCMGVECYRTTFLIWGCLCSFGTLLALL 133
           HN+VVANIP GSFL+GYMAA+LY    +   GKC+GVECYRTTF+IWGCLCS GTLLALL
Sbjct: 495 HNVVVANIPFGSFLFGYMAAYLYRKQATGDTGKCIGVECYRTTFMIWGCLCSLGTLLALL 554

Query: 134 LFLRTRSFYSAKLHSAEEDST 154
           LF RTRSFYS       + ST
Sbjct: 555 LFARTRSFYSTTKSPMAQGST 575

[Close]

BLAST of Moc03g00540 vs. TAIR 10
Match: AT2G30300.1 (Major facilitator superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-26
Identity = 61/131 (46.56%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 16  MAALMVGMCGGFFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNHNL 75
           MA  +V M   F LL   S+ +L + TA+I   +GA+TS+SV+ T +LFG K+F VNHN+
Sbjct: 369 MAGSLVAMVASFLLLLIDSDIALYIGTAMIGIFSGALTSLSVTMTAELFGTKHFGVNHNI 428

Query: 76  VVANIPIGSFLYGYMAAFLYHSHPSAAA--GKCMGVECYRTTFLIWGCLCSFGTLLALLL 135
           VV +IP+GSF +G +AA +Y    +     GKC G+ C++TT + WG LCS   LLA +L
Sbjct: 429 VVGSIPLGSFSFGLLAAKIYRDGAALYGDDGKCFGMHCFQTTLVFWGMLCSIAALLAAVL 488

Query: 136 FLRTRSFYSAK 145
           ++R R FYS K
Sbjct: 489 YIRNRKFYSQK 499

[Close]

BLAST of Moc03g00540 vs. TAIR 10
Match: AT5G45275.1 (Major facilitator superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 3.9e-20
Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 27  FFLLWWPSNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNHNLVVANIPIGSFL 86
           F L    S A+L   TA+I   +G I + +VS T++LFG  +  VNHN+++ NIPIGS +
Sbjct: 437 FLLASSGSLAALQAGTALIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLV 496

Query: 87  YGYMAAFLYHSHPSAAAGK-----CMGVECYRTTFLIWGCLCSFGTLLALLLFLRTRSFY 142
           YG++AA +Y SH S A  K     CMG +CY  TF+ WGCL   G   +++LFLRTR  Y
Sbjct: 497 YGFLAALVYESH-SVAGSKTESVICMGRDCYLQTFMWWGCLSVIGLASSVVLFLRTRRAY 555

[Close]

BLAST of Moc03g00540 vs. TAIR 10
Match: AT1G31470.1 (Major facilitator superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.6e-18
Identity = 54/134 (40.30%), Postives = 81/134 (60.45%), Query Frame = 0


Query: 27  FFLLWWPSN--ASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNHNLVVANIPIGS 86
           FFLL   S+   +L  +TA+I   +G I + +VS T+ LFG  +  VNHN+++ NIPIGS
Sbjct: 439 FFLLAVSSSQQTALQTATALIGLSSGFIFAAAVSITSDLFGPNSVGVNHNILITNIPIGS 498

Query: 87  FLYGYMAAFLYHSHPS-------AAAGKCMGVECYRTTFLIWGCLCSFGTLLALLLFLRT 146
            LYGY+AA +Y ++ S       + +  C+G +CY  TF+ WGCL   G + +L L++RT
Sbjct: 499 LLYGYIAASIYEANASPDITPIVSDSIVCIGRDCYFKTFVFWGCLSILGVVSSLSLYIRT 558

Query: 147 RSFYSAKLHSAEED 152
           +  Y    H  E+D
Sbjct: 559 KPVY----HRLEQD 568

[Close]

BLAST of Moc03g00540 vs. TAIR 10
Match: AT3G01630.1 (Major facilitator superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 6.2e-18
Identity = 52/125 (41.60%), Postives = 74/125 (59.20%), Query Frame = 0


Query: 27  FFLLWWP---SNASLCVSTAIIAGCTGAITSISVSTTTQLFGAKNFSVNHNLVVANIPIG 86
           F L + P     A L V+TA+I   +G + + +VS T++LFG  +  VN N+++ NIPIG
Sbjct: 419 FILAYSPKTNQTALLEVATALIGLSSGFVFAAAVSITSELFGRNSVGVNQNILITNIPIG 478

Query: 87  SFLYGYMAAFLYHSHPS-------AAAGKCMGVECYRTTFLIWGCLCSFGTLLALLLFLR 142
           S  YGYMA  +Y ++ S       A +  C+G +CY  TFL WGCL   G + +L LF+R
Sbjct: 479 SLFYGYMAGSVYDTNASLGRKSVVADSVVCVGRKCYFVTFLFWGCLSVLGFVCSLFLFIR 538

[Close]

BLAST of Moc03g00540 vs. TAIR 10
Match: AT4G19450.1 (Major facilitator superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 8.2e-18
Identity = 59/154 (38.31%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 11  AGAGRMAALMVGMCGGFFLLWWPSNAS-LCVSTAIIAGCTGAITSISVSTTTQLFGAKNF 70
           A  G +A  ++      FLL     AS L   TA++   +G I + +VS T++LFG  + 
Sbjct: 419 ARTGWLAIALLPTPFALFLLASSGTASALQAGTALMGLSSGFIFAAAVSITSELFGPNSV 478

Query: 71  SVNHNLVVANIPIGSFLYGYMAAFLYHSH-------PSAAAGKCMGVECYRTTFLIWGCL 130
            VNHN+++ NIPIGS +YG++AA +Y SH        ++ +  CMG +CY  TF+ WGCL
Sbjct: 479 GVNHNILITNIPIGSLIYGFLAALVYDSHGFTGTKSMTSESVVCMGRDCYYLTFVWWGCL 538

Query: 131 CSFGTLLALLLFLRTRSFY----SAKLHSAEEDS 153
              G   +L+LF+RTR  Y     A++ S   DS
Sbjct: 539 SLLGLGSSLVLFIRTRRAYQRFEQARISSNINDS 572

The following BLAST results are available for this feature:

BLAST of Moc03g00540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970645.1	1.2e-47	71.43	protein NUCLEAR FUSION DEFECTIVE 4-like [Cucurbita maxima]	[more]
XP_022998130.1	4.6e-47	71.53	protein NUCLEAR FUSION DEFECTIVE 4-like [Cucurbita maxima]	[more]
KAG7037031.1	3.0e-46	70.80	Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022949166.1	3.0e-46	70.80	protein NUCLEAR FUSION DEFECTIVE 4-like [Cucurbita moschata]	[more]
KAG6607357.1	3.0e-46	70.80	Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of Moc03g00540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I9E1	2.3e-17	40.30	Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=NFD4 PE=3 ...	[more]

BLAST of Moc03g00540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3F0	5.9e-48	71.43	protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111469...	[more]
A0A6J1KBR5	2.2e-47	71.53	protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492...	[more]
A0A6J1GB93	1.4e-46	70.80	protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A1S3C569	1.2e-45	76.34	protein NUCLEAR FUSION DEFECTIVE 4 OS=Cucumis melo OX=3656 GN=LOC103497028 PE=4 ...	[more]
A0A6J1HMC6	7.9e-45	69.50	protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Moc03g00540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30300.1	2.1e-26	46.56	Major facilitator superfamily protein	[more]
AT5G45275.1	3.9e-20	45.83	Major facilitator superfamily protein	[more]
AT1G31470.1	1.6e-18	40.30	Major facilitator superfamily protein	[more]
AT3G01630.1	6.2e-18	41.60	Major facilitator superfamily protein	[more]
AT4G19450.1	8.2e-18	38.31	Major facilitator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21576:SF11	MAJOR FACILITATOR SUPERFAMILY PROTEIN	coord: 13..144
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 13..144
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 17..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g00540.1	Moc03g00540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane