Moc02g17610 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g17610
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	disease resistance protein RGA2-like
Location	chr2: 13189697 .. 13190140 (-)
RNA-Seq Expression	Moc02g17610
Synteny	Moc02g17610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCAAATGATACAACTTCAAACGTTGTCTGTATTTGTAGCAGGATTTGAAGAGGGTTGCAAAATTACAGAAGTTGGACCTCTGAAAAACTTGAAAGGTAGTTTGAAACTTACAAATTTGGACCAAACTGCAAAATTGGTGGAAAAGGAGAATTTACGTGATCTCGCCTTTATTTGGAGTTGGGATTGTCGTAGAAAAGTCAACTATCACAATGATCTGGAAGTACTGGAAGGACTTCAACCACACAAGAATCTACAAAATTTGAACATTCAATCCTTTCAAGGAAAATATTTGCCTAACAAGATTTTTGTTGAGAATTTGGTGGCAATCACTCTAAAAGGTTGTGGAAATTGTGAAAGGCTTCCCATGCTTGGACAATTAACCAACTTAGAAGAGCTTCATATTTTTCACTTAAAGAGTGTAACGGAGTATAGGAAATGA

mRNA sequence

ATGAGTCAAATGATACAACTTCAAACGTTGTCTGTATTTGTAGCAGGATTTGAAGAGGGTTGCAAAATTACAGAAGTTGGACCTCTGAAAAACTTGAAAGGTAGTTTGAAACTTACAAATTTGGACCAAACTGCAAAATTGGTGGAAAAGGAGAATTTACGTGATCTCGCCTTTATTTGGAGTTGGGATTGTCGTAGAAAAGTCAACTATCACAATGATCTGGAAGTACTGGAAGGACTTCAACCACACAAGAATCTACAAAATTTGAACATTCAATCCTTTCAAGGAAAATATTTGCCTAACAAGATTTTTGTTGAGAATTTGGTGGCAATCACTCTAAAAGGTTGTGGAAATTGTGAAAGGCTTCCCATGCTTGGACAATTAACCAACTTAGAAGAGCTTCATATTTTTCACTTAAAGAGTGTAACGGAGTATAGGAAATGA

Coding sequence (CDS)

ATGAGTCAAATGATACAACTTCAAACGTTGTCTGTATTTGTAGCAGGATTTGAAGAGGGTTGCAAAATTACAGAAGTTGGACCTCTGAAAAACTTGAAAGGTAGTTTGAAACTTACAAATTTGGACCAAACTGCAAAATTGGTGGAAAAGGAGAATTTACGTGATCTCGCCTTTATTTGGAGTTGGGATTGTCGTAGAAAAGTCAACTATCACAATGATCTGGAAGTACTGGAAGGACTTCAACCACACAAGAATCTACAAAATTTGAACATTCAATCCTTTCAAGGAAAATATTTGCCTAACAAGATTTTTGTTGAGAATTTGGTGGCAATCACTCTAAAAGGTTGTGGAAATTGTGAAAGGCTTCCCATGCTTGGACAATTAACCAACTTAGAAGAGCTTCATATTTTTCACTTAAAGAGTGTAACGGAGTATAGGAAATGA

Protein sequence

MSQMIQLQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQTAKLVEKENLRDLAFIWSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKIFVENLVAITLKGCGNCERLPMLGQLTNLEELHIFHLKSVTEYRK

Homology

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BLAST of Moc02g17610 vs. NCBI nr
Match: XP_022158717.1 (putative disease resistance protein RGA3 [Momordica charantia])

HSP 1 Score: 194.1 bits (492), Expect = 8.3e-46
Identity = 100/150 (66.67%), Postives = 118/150 (78.67%), Query Frame = 0


Query: 1   MSQMIQLQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQT--------AKLVEKEN 60
           +SQ++QLQTLS F+ GFE+G KITE+GPLKNLKGSL L+NL++         AKL EKEN
Sbjct: 655 LSQLVQLQTLSTFIVGFEKGRKITELGPLKNLKGSLNLSNLERIKSKEEAMFAKLGEKEN 714

Query: 61  LRDLAFIWSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKIFVENLVAIT 120
           L +L F W+    R+ N HNDL+VLEGLQPHK+LQ+L+IQSF G+ LPNKIFVENLVAI+
Sbjct: 715 LHELTFTWTCSSEREYNNHNDLDVLEGLQPHKSLQSLSIQSFLGECLPNKIFVENLVAIS 774

Query: 121 LKGCGNCERLPMLGQLTNLEELHIFHLKSV 143
           L  C NCERLPMLGQLTNLEEL I  L SV
Sbjct: 775 LVDCENCERLPMLGQLTNLEELCISGLHSV 804

[Close]

BLAST of Moc02g17610 vs. NCBI nr
Match: XP_004152290.1 (disease resistance protein RGA2 [Cucumis sativus] >KGN53103.2 hypothetical protein Csa_014404 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 7.6e-39
Identity = 90/150 (60.00%), Postives = 107/150 (71.33%), Query Frame = 0


Query: 1   MSQMIQLQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQ--------TAKLVEKEN 60
           M ++I LQ LS FVAGFEEGCKI E+G LKNLKG L+L+NL+Q         AKLV K+N
Sbjct: 634 MGELIHLQILSWFVAGFEEGCKIEELGNLKNLKGQLQLSNLEQVRSKEEALAAKLVNKKN 693

Query: 61  LRDLAFIWSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKIFVENLVAIT 120
           LR+L F WS D  R+ + +ND EVLEGLQP KNL +L I +F GK+LP   FVENLV + 
Sbjct: 694 LRELTFEWSIDILRECSSYNDFEVLEGLQPPKNLSSLKITNFGGKFLPAATFVENLVFLC 753

Query: 121 LKGCGNCERLPMLGQLTNLEELHIFHLKSV 143
           L GC  CERLPMLGQL NL+EL I  + SV
Sbjct: 754 LYGCTKCERLPMLGQLANLQELSICFMDSV 783

[Close]

BLAST of Moc02g17610 vs. NCBI nr
Match: XP_038885174.1 (disease resistance protein RGA2-like [Benincasa hispida])

HSP 1 Score: 169.1 bits (427), Expect = 2.9e-38
Identity = 88/150 (58.67%), Postives = 108/150 (72.00%), Query Frame = 0


Query: 1   MSQMIQLQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQ--------TAKLVEKEN 60
           M ++I LQTLS FV GFEEGCKI E+G LKNLKG L+L+NL+Q         AKL +K+N
Sbjct: 689 MGELIHLQTLSGFVVGFEEGCKIEELGNLKNLKGQLRLSNLEQVKSKEEAIAAKLADKKN 748

Query: 61  LRDLAFIWSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKIFVENLVAIT 120
           LR+L F WS D  R+ + +ND EVLEGLQPHKNL +L I +F GK+LP   FVENL+ + 
Sbjct: 749 LRELTFEWSIDFLREGSNYNDSEVLEGLQPHKNLCSLKITNFGGKFLPTATFVENLMFLC 808

Query: 121 LKGCGNCERLPMLGQLTNLEELHIFHLKSV 143
           L GC  CERLP+LGQL NL+EL I  + SV
Sbjct: 809 LYGCTKCERLPVLGQLPNLKELGICFMDSV 838

[Close]

BLAST of Moc02g17610 vs. NCBI nr
Match: XP_022145125.1 (putative disease resistance RPP13-like protein 1 [Momordica charantia])

HSP 1 Score: 168.7 bits (426), Expect = 3.8e-38
Identity = 89/152 (58.55%), Postives = 113/152 (74.34%), Query Frame = 0


Query: 1   MSQMIQLQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLD--------QTAKLVEKEN 60
           +S++ QLQTLS FV GFE GCKI E+GPLKNLKG L+L+NL+         T+KLVEK+N
Sbjct: 256 LSRLTQLQTLSGFVVGFENGCKIEELGPLKNLKGRLELSNLEHIKSKEEAMTSKLVEKKN 315

Query: 61  LRDLAFIWSWDCRRK--VNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKIFVENLVA 120
           L +L F W     R+  +N +NDLEVLEGLQPH++LQ L+I++F G++LP+ IFVENLV 
Sbjct: 316 LNELLFEWDLHILREGSINNNNDLEVLEGLQPHQSLQFLSIKNFAGQFLPSGIFVENLVV 375

Query: 121 ITLKGCGNCERLPMLGQLTNLEELHIFHLKSV 143
           I L+ C  CE LPMLGQL+NLEEL+I  L  V
Sbjct: 376 IHLRHCERCEILPMLGQLSNLEELNISSLNRV 407

[Close]

BLAST of Moc02g17610 vs. NCBI nr
Match: XP_008453965.1 (PREDICTED: disease resistance protein RGA2-like [Cucumis melo])

HSP 1 Score: 167.2 bits (422), Expect = 1.1e-37
Identity = 88/150 (58.67%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 1   MSQMIQLQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQ--------TAKLVEKEN 60
           M ++I LQTLS FVAGFEEGCKI E+G LKNL+G L+L+NL+Q          KLV+K+N
Sbjct: 635 MGELIHLQTLSGFVAGFEEGCKIEELGNLKNLRGKLQLSNLEQVRSKQEAIAVKLVDKKN 694

Query: 61  LRDLAFIWSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKIFVENLVAIT 120
           LR+L F WS D  R+ + +ND EVLEGLQP KNL +L I +F GK+LP   FVENL  + 
Sbjct: 695 LRELTFEWSIDLLREFSSYNDFEVLEGLQPPKNLTSLKITNFGGKFLPAGTFVENLAFLC 754

Query: 121 LKGCGNCERLPMLGQLTNLEELHIFHLKSV 143
           L GC  CERLPMLGQL NL+EL I  L  V
Sbjct: 755 LYGCTKCERLPMLGQLPNLQELGICFLDRV 784

[Close]

BLAST of Moc02g17610 vs. ExPASy Swiss-Prot
Match: Q7XA42 (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 8.4e-17
Identity = 60/150 (40.00%), Postives = 81/150 (54.00%), Query Frame = 0


Query: 7   LQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQT--------AKLVEKENLRDLAF 66
           L++LS FV G  +G ++ E+  L NL GS+ +T LD+         A L  K NL  L  
Sbjct: 621 LKSLSCFVIGKRKGHQLGELKNL-NLYGSISITKLDRVKKDTDAKEANLSAKANLHSLCL 680

Query: 67  IWSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLP---NKIFVENLVAITLKG 126
             SWD   K  Y  D EVLE L+PH NL+ L I  F G  LP   N+  ++N+V+I ++G
Sbjct: 681 --SWDLDGKHRY--DSEVLEALKPHSNLKYLEINGFGGIRLPDWMNQSVLKNVVSIRIRG 740

Query: 127 CGNCERLPMLGQLTNLEELHIFHLKSVTEY 146
           C NC  LP  G+L  LE L +    +  EY
Sbjct: 741 CENCSCLPPFGELPCLESLELHTGSADVEY 765

[Close]

BLAST of Moc02g17610 vs. ExPASy Swiss-Prot
Match: Q9LRR4 (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RPPL1 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 7   LQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQT--------AKLVEKENLRDLAF 66
           LQTL+ F     +G +I+E+G L +L G LK+  L +         A L  K++LR++ F
Sbjct: 674 LQTLTTFFVSASDGSRISELGGLHDLHGKLKIVELQRVVDVADAAEANLNSKKHLREIDF 733

Query: 67  IW---SWDCRRKVNYH---NDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKI---FVENLV 126
           +W   S       N H   N+ EV E L+PH++++ L I+ ++G+  P+ +       +V
Sbjct: 734 VWRTGSSSSENNTNPHRTQNEAEVFEKLRPHRHIEKLAIERYKGRRFPDWLSDPSFSRIV 793

Query: 127 AITLKGCGNCERLPMLGQLTNLEELHI 137
            I L+ C  C  LP LGQL  L+ELHI
Sbjct: 794 CIRLRECQYCTSLPSLGQLPCLKELHI 820

[Close]

BLAST of Moc02g17610 vs. ExPASy Swiss-Prot
Match: Q7XBQ9 (Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.3e-14
Identity = 52/150 (34.67%), Postives = 82/150 (54.67%), Query Frame = 0


Query: 7   LQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQT--------AKLVEKENLRDLAF 66
           L+TL  FV G ++G ++ E+G L NL GS+K+++L++         A L  K NL  L+ 
Sbjct: 622 LKTLGQFVVGRKKGYQLGELGNL-NLYGSIKISHLERVKNDKDAKEANLSAKGNLHSLSM 681

Query: 67  IWSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLP---NKIFVENLVAITLKG 126
            W+ +    +    +++VLE L+PH NL +L I  F+G +LP   N   ++N+V+I +  
Sbjct: 682 SWN-NFGPHIYESEEVKVLEALKPHSNLTSLKIYGFRGIHLPEWMNHSVLKNIVSILISN 741

Query: 127 CGNCERLPMLGQLTNLEELHIFHLKSVTEY 146
             NC  LP  G L  LE L +    +  EY
Sbjct: 742 FRNCSCLPPFGDLPCLESLELHWGSADVEY 769

[Close]

BLAST of Moc02g17610 vs. ExPASy Swiss-Prot
Match: Q7XA40 (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 5.1e-14
Identity = 54/142 (38.03%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 7   LQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQT--------AKLVEKENLRDLAF 66
           L+TL  FV G  +G ++ E+  L NL+G++ +T+L++         A L  K NL  L+ 
Sbjct: 630 LKTLGYFVVGERKGYQLGELRNL-NLRGAISITHLERVKNDMEAKEANLSAKANLHSLSM 689

Query: 67  IWSWDCRRKVNYHN-DLEVLEGLQPHKNLQNLNIQSFQGKYLP---NKIFVENLVAITLK 126
             SWD  R   Y + +++VLE L+PH NL+ L I  F G  LP   N   ++N+V+I + 
Sbjct: 690 --SWD--RPNRYESEEVKVLEALKPHPNLKYLEIIDFCGFCLPDWMNHSVLKNVVSILIS 749

Query: 127 GCGNCERLPMLGQLTNLEELHI 137
           GC NC  LP  G+L  LE L +
Sbjct: 750 GCENCSCLPPFGELPCLESLEL 766

[Close]

BLAST of Moc02g17610 vs. ExPASy Swiss-Prot
Match: Q7XA39 (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=RGA4 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.1e-14
Identity = 51/149 (34.23%), Postives = 80/149 (53.69%), Query Frame = 0


Query: 7   LQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNL-------DQTAKLVEKENLRDLAFI 66
           L+TL  F+ G ++G ++ E+  L NL GS+ +T+L       D  A L  K NL+ L+  
Sbjct: 622 LKTLGFFIVGSKKGYQLGELKNL-NLCGSISITHLERVKNDTDAEANLSAKANLQSLSMS 681

Query: 67  WSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLP---NKIFVENLVAITLKGC 126
           W  D   +     +++VLE L+PH NL+ L I +F G   P   N   +E ++++ +K C
Sbjct: 682 WDNDGPNRYE-SKEVKVLEALKPHPNLKYLEIIAFGGFRFPSWINHSVLEKVISVRIKSC 741

Query: 127 GNCERLPMLGQLTNLEELHIFHLKSVTEY 146
            NC  LP  G+L  LE L + +  +  EY
Sbjct: 742 KNCLCLPPFGELPCLENLELQNGSAEVEY 768

[Close]

BLAST of Moc02g17610 vs. ExPASy TrEMBL
Match: A0A6J1DXY1 (putative disease resistance protein RGA3 OS=Momordica charantia OX=3673 GN=LOC111025175 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.0e-46
Identity = 100/150 (66.67%), Postives = 118/150 (78.67%), Query Frame = 0


Query: 1   MSQMIQLQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQT--------AKLVEKEN 60
           +SQ++QLQTLS F+ GFE+G KITE+GPLKNLKGSL L+NL++         AKL EKEN
Sbjct: 655 LSQLVQLQTLSTFIVGFEKGRKITELGPLKNLKGSLNLSNLERIKSKEEAMFAKLGEKEN 714

Query: 61  LRDLAFIWSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKIFVENLVAIT 120
           L +L F W+    R+ N HNDL+VLEGLQPHK+LQ+L+IQSF G+ LPNKIFVENLVAI+
Sbjct: 715 LHELTFTWTCSSEREYNNHNDLDVLEGLQPHKSLQSLSIQSFLGECLPNKIFVENLVAIS 774

Query: 121 LKGCGNCERLPMLGQLTNLEELHIFHLKSV 143
           L  C NCERLPMLGQLTNLEEL I  L SV
Sbjct: 775 LVDCENCERLPMLGQLTNLEELCISGLHSV 804

[Close]

BLAST of Moc02g17610 vs. ExPASy TrEMBL
Match: A0A0A0KXG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016360 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.7e-39
Identity = 90/150 (60.00%), Postives = 107/150 (71.33%), Query Frame = 0


Query: 1   MSQMIQLQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQ--------TAKLVEKEN 60
           M ++I LQ LS FVAGFEEGCKI E+G LKNLKG L+L+NL+Q         AKLV K+N
Sbjct: 547 MGELIHLQILSWFVAGFEEGCKIEELGNLKNLKGQLQLSNLEQVRSKEEALAAKLVNKKN 606

Query: 61  LRDLAFIWSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKIFVENLVAIT 120
           LR+L F WS D  R+ + +ND EVLEGLQP KNL +L I +F GK+LP   FVENLV + 
Sbjct: 607 LRELTFEWSIDILRECSSYNDFEVLEGLQPPKNLSSLKITNFGGKFLPAATFVENLVFLC 666

Query: 121 LKGCGNCERLPMLGQLTNLEELHIFHLKSV 143
           L GC  CERLPMLGQL NL+EL I  + SV
Sbjct: 667 LYGCTKCERLPMLGQLANLQELSICFMDSV 696

[Close]

BLAST of Moc02g17610 vs. ExPASy TrEMBL
Match: A0A6J1CTK8 (putative disease resistance RPP13-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111014641 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.8e-38
Identity = 89/152 (58.55%), Postives = 113/152 (74.34%), Query Frame = 0


Query: 1   MSQMIQLQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLD--------QTAKLVEKEN 60
           +S++ QLQTLS FV GFE GCKI E+GPLKNLKG L+L+NL+         T+KLVEK+N
Sbjct: 256 LSRLTQLQTLSGFVVGFENGCKIEELGPLKNLKGRLELSNLEHIKSKEEAMTSKLVEKKN 315

Query: 61  LRDLAFIWSWDCRRK--VNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKIFVENLVA 120
           L +L F W     R+  +N +NDLEVLEGLQPH++LQ L+I++F G++LP+ IFVENLV 
Sbjct: 316 LNELLFEWDLHILREGSINNNNDLEVLEGLQPHQSLQFLSIKNFAGQFLPSGIFVENLVV 375

Query: 121 ITLKGCGNCERLPMLGQLTNLEELHIFHLKSV 143
           I L+ C  CE LPMLGQL+NLEEL+I  L  V
Sbjct: 376 IHLRHCERCEILPMLGQLSNLEELNISSLNRV 407

[Close]

BLAST of Moc02g17610 vs. ExPASy TrEMBL
Match: A0A5A7TNC1 (Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003650 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 5.3e-38
Identity = 88/150 (58.67%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 1   MSQMIQLQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQ--------TAKLVEKEN 60
           M ++I LQTLS FVAGFEEGCKI E+G LKNL+G L+L+NL+Q         AKLV K+N
Sbjct: 635 MGELIHLQTLSGFVAGFEEGCKIEELGNLKNLRGKLQLSNLEQVRSKQEAIAAKLVNKKN 694

Query: 61  LRDLAFIWSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKIFVENLVAIT 120
           LR+L F WS D  R+ + +ND EVLEGLQP KNL +L I +F GK+LP   FVENL  + 
Sbjct: 695 LRELTFEWSIDLLREFSSYNDFEVLEGLQPPKNLTSLKITNFGGKFLPAGTFVENLAFLC 754

Query: 121 LKGCGNCERLPMLGQLTNLEELHIFHLKSV 143
           L GC  CERLPMLGQL NL+EL I  +  V
Sbjct: 755 LYGCTKCERLPMLGQLPNLQELGICFMDRV 784

[Close]

BLAST of Moc02g17610 vs. ExPASy TrEMBL
Match: A0A1S3BXM2 (disease resistance protein RGA2-like OS=Cucumis melo OX=3656 GN=LOC103494527 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 5.3e-38
Identity = 88/150 (58.67%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 1   MSQMIQLQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQ--------TAKLVEKEN 60
           M ++I LQTLS FVAGFEEGCKI E+G LKNL+G L+L+NL+Q          KLV+K+N
Sbjct: 635 MGELIHLQTLSGFVAGFEEGCKIEELGNLKNLRGKLQLSNLEQVRSKQEAIAVKLVDKKN 694

Query: 61  LRDLAFIWSWDCRRKVNYHNDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKIFVENLVAIT 120
           LR+L F WS D  R+ + +ND EVLEGLQP KNL +L I +F GK+LP   FVENL  + 
Sbjct: 695 LRELTFEWSIDLLREFSSYNDFEVLEGLQPPKNLTSLKITNFGGKFLPAGTFVENLAFLC 754

Query: 121 LKGCGNCERLPMLGQLTNLEELHIFHLKSV 143
           L GC  CERLPMLGQL NL+EL I  L  V
Sbjct: 755 LYGCTKCERLPMLGQLPNLQELGICFLDRV 784

[Close]

BLAST of Moc02g17610 vs. TAIR 10
Match: AT3G14470.1 (NB-ARC domain-containing disease resistance protein )

HSP 1 Score: 87.8 bits (216), Expect = 7.8e-18
Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 7   LQTLSVFVAGFEEGCKITEVGPLKNLKGSLKLTNLDQT--------AKLVEKENLRDLAF 66
           LQTL+ F     +G +I+E+G L +L G LK+  L +         A L  K++LR++ F
Sbjct: 674 LQTLTTFFVSASDGSRISELGGLHDLHGKLKIVELQRVVDVADAAEANLNSKKHLREIDF 733

Query: 67  IW---SWDCRRKVNYH---NDLEVLEGLQPHKNLQNLNIQSFQGKYLPNKI---FVENLV 126
           +W   S       N H   N+ EV E L+PH++++ L I+ ++G+  P+ +       +V
Sbjct: 734 VWRTGSSSSENNTNPHRTQNEAEVFEKLRPHRHIEKLAIERYKGRRFPDWLSDPSFSRIV 793

Query: 127 AITLKGCGNCERLPMLGQLTNLEELHI 137
            I L+ C  C  LP LGQL  L+ELHI
Sbjct: 794 CIRLRECQYCTSLPSLGQLPCLKELHI 820

The following BLAST results are available for this feature:

BLAST of Moc02g17610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158717.1	8.3e-46	66.67	putative disease resistance protein RGA3 [Momordica charantia]	[more]
XP_004152290.1	7.6e-39	60.00	disease resistance protein RGA2 [Cucumis sativus] >KGN53103.2 hypothetical prote...	[more]
XP_038885174.1	2.9e-38	58.67	disease resistance protein RGA2-like [Benincasa hispida]	[more]
XP_022145125.1	3.8e-38	58.55	putative disease resistance RPP13-like protein 1 [Momordica charantia]	[more]
XP_008453965.1	1.1e-37	58.67	PREDICTED: disease resistance protein RGA2-like [Cucumis melo]	[more]

BLAST of Moc02g17610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA42	8.4e-17	40.00	Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q9LRR4	1.1e-16	35.37	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702...	[more]
Q7XBQ9	2.3e-14	34.67	Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 ...	[more]
Q7XA40	5.1e-14	38.03	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q7XA39	5.1e-14	34.23	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]

BLAST of Moc02g17610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXY1	4.0e-46	66.67	putative disease resistance protein RGA3 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A0A0KXG0	3.7e-39	60.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016360 PE=4 SV=1	[more]
A0A6J1CTK8	1.8e-38	58.55	putative disease resistance RPP13-like protein 1 OS=Momordica charantia OX=3673 ...	[more]
A0A5A7TNC1	5.3e-38	58.67	Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BXM2	5.3e-38	58.67	disease resistance protein RGA2-like OS=Cucumis melo OX=3656 GN=LOC103494527 PE=...	[more]

BLAST of Moc02g17610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14470.1	7.8e-18	35.37	NB-ARC domain-containing disease resistance protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 1..146 e-value: 5.2E-14 score: 53.4
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 5..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g17610.1	Moc02g17610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
molecular_function	GO:0043531	ADP binding