Moc02g17280 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc02g17280
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Locationchr2: 12949335 .. 12954766 (-)
RNA-Seq ExpressionMoc02g17280
SyntenyMoc02g17280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCCAGGTCTGACCTACCGGGAAGCTCGGTAGGGGCTGATGTGAGCAACTGTCTGCGGCGTGATTATCGGGCGTAACCGTCGGTCCCGAGATTACCGGGTGTAACCGACGGTCCCGAGATTACCGAATGTAACCGTCGCGAGATTCGCGGGACTACCACCCATAAGTAGAGGACCTCACTCCCCGATCAGGTACGACGATTTCTGGCCTCGAACTAAACTTGGAATCCGACCTATACTGACTTGATCGTCGGAATGCTCACCTTTTTGTGCAGGTCCGCCCAAGTGTTCAGGTCGGTCCGGAGGCCGAGTTCGAGCTACAATCGGGAACACACTGTTGTGCATATCCTTGCATAAACATCATTTTTAAAATTCTATAAAAGAAGAAGCATAAGTTCCAGAAGCATAAGTTTCAACCGTCTAGAAAAGCGTAAGTTTCATTCTTGTATAATCTTTAGGTAAAAGCTTGAGACATCAATCTTCGTTCTTGGTGATTGTCGTATTTTCGGAGATACTATCTTTGAAGCCTTCCGTTCTTCCATAGCAACACTTTTGGCGTTGGTTTATATTGTCTTTTGGGACGAACGACATCAACATTTTCGACGATGTTTTTTTATTTCATTTTTCGTGTTTGTACCATTGCTTTTATCTGAAAAAAAAATTATTTCATATATTAGTATATCATAAAACATATATTAGAGGTAATATGTTCGAAATAATTCGTAGATATCATAGTTATATAAGAAGTAAATCAATCTCATATCATATGTATATCAAACATATATAACATATATATCAAGAGTATATATATTAATCATAGTTATATCAGAAGTAAATCAATAGTATATAAGAAGTCAATCTGTTCTGTATCACCTATAGTAGTAGATATCAGAAGTAAATCAATTTCATATCATATGTATATCAAACATATATCACATATATATGAGGAGTATATCTGTCAATCATAGTTATATCATAAGTAAATCAATAGTATATCAAAAGTCAATTAGTTCTATATCACCTATAGTAGTATATATCATAGTTATATCGGAAGTAAATCAATTTCAAATCAAATATATATGAAACATATATCACATATATATCCGGAGTATATCTGTCAATCATAGTTATATCATAAGTAAACCAATAGTATATCAGAAGTCAATCAATTCTATGTCACCTATAGTAGTAGATATCATAGTTATATCAGAAGTAAATCAATTTCATACCATATGTATATCAAACATATATCACATATATATCAGGAGTATATCTTTCAATCATTAGTATATCAGAACTAATTTATTGTTGGTTCGAGCCTGCAGGGTATATTTGTAATTTAGAACGTGGGCCTCCGTTTTTTTGCCAAAAAAATGCTATATTTGAAAAAAACCAAACCTTGTTGCTATTTTGCTTATTTTCCTAACTTTTTTTGCCATATCTCAAGTTGCCCCTTTTTTTTTTTTTTGTCATAATCTGAAGTCACCCTTCCCATTCAACTTCTCCAATTCAAACTTCGGTGAAATCTTGAACCTCAATTTTTTAATCTTGAAAATATCAAAGTGGAAGAATCATGTATTAACAACAAGAATCCCGAATTCTGAAGCTCTGATACCAATTTGTAAGACACAAACATCTAGTAAGTACACCACAAAAGCTAATAAAAAACACGATGAATAATAGAAGAAGGAAAAACACAAAATTTAAGTACTGGTTCGATCAATGCGAAATTATAGTACAAATTAAAAAATGTTTTAGAGGTGGTCATGGTTCGAGTCGAGGGAGAACACAAAATTTAAGTACTGGTTCGATCAATGCATGGTTCGAGTTGAGGGCGAAAAACACGACGAATAATAGAAGAAGGAAAAACACAAAATTTAAGTACTGGTTCGATCAATGCGAAATTATAGTACAAATTAAAAAATGTTTTAGAGGTGGTCATGGTTCGAGTCGAGGGAGAACACAAAATTTAAGTACTGGTTCGATCAATGCATGGTTCGAGTTGAGGGCGGAAAAAAAACTGGTTTGAGTAGAGCCAACAACACAAGTACTAGGCTAAGAAATCTGAGCCATTCCCCTTAATTAGAGGTGCTGTGGTGCAAGCATATTGAATTTCATCGTCTGATGAAGACCGACAGCTGAAGCCTCTGTTCAGAGAGAAGAGGACCAAAGTTTACACACTACTCAACCAGTGGGAGGTAACAACGGCATTGACAGGCTCAACTAAAATACAACCCACATTCTTCTAATCTTTCCGGTGTGGGTCAGCCGTCCATATTTCTTTTCTTTATATTTTGTTCATCACCAACTTAAGTTAATCACCAATTACTTTTGATAATTATTTATTGTAGATCCAGAAAATGGCAAAGCTTTTCAGCCTTCTTTTTATTTTATTATTATTAAACAAATGTGATTTAAACTTGCATGAATGCAATTTAGCATATTTTGTTTCTGGAAGACCATTCGAAGTTGCCATTTTTCCTGTGTGAGAACTAATTATATCTTCATGCTTCCTTATGCAGCAAGGATCATTGGGCTGTCCCTTCCCAGCAAAAATTGGATCCATAAATTATCTTTTAAGGTATAAAGATAGTTGCACATTTTACTTTATATTTAATAAAATAAATTGTGTTACCAGAATGTTTTGCAGTTCTGTTGCCTCCACAACATCGACTTAAATAGTCTGAATCTTCAGAAGATGTAGATAGATTATTGAGGGCGTATTGGGGAGTGATAATATAATTAGTGATTTTGAGAAAATAATTTTTTTTTCCAAAATCATGATCTAAGTATAACTTAAAAATCAATTTAAACTGATTTTAAACTTTGTTAAAATCAAATTTTTAATTTGCCAAATATGATCTTAATCTACGACACAAAAATTTCTCTTTCGAGTAAAAGAGACTTGGCTGGGTACATTTCTATATTAGACCGTATTTTTTCGGCCGACTTGAACTTTGTATCGTTCTTTGTCGGTCTTTTTTATCCATAAATCAGTAGTAACCTCACTTGTGTAATAATTGTTACTAGAGTAGGCCTATCTATAAAATGTAGACTTCGATATTTGTCCTTGGAACCACAATTATTTGCATATTTGCAAAACAACAGATTGCTTTTCTCTATCATTTCCCTACCATTTTTAAAACATTTGTGGGATCTATTAGATATTTTGCAAACTACTGAACTTCACAGATATTTGAGTTTTGGAAATAGTTAATAAGTAGGAAGTCCCATCAACCTAAACCCAGCTGTTTGTCGGTTTAATGAATCCATTGATGTTTTCATTTTCGATTTCTGGTTTGTGTCGTCCTTATAATATCCATGATGTTAGAAAAACTCGGGGGTAATGTTTGTGTTTCTAATTTCTTGTTTTTGTTTTCAGTTTTTTAGAAACACAAGTGTTTGATAAATGATAACTATTCATTTTTTGGTTTATCATTTTCAAGAAATGTTTTCTAAGTTATATCTATTTTGGAAACAACAAAATCAAGTTTTTGTTTCTTGTTACCGTTTCCAATTTTGTCCAACACATAAAAAAAAATTATAATTTTTTCATTCATAAAATACGTAATAAATATTAAAAAAAGAAATATAAGATAACAAATTGAATATTCAATTTTAAAAATAAATTTTTATATGAAAATTATTTTTTTAACTTAAAATTTTAAAAAACAAGAAATAAACAAGGGTTATAAAACATTTCTCTGTTTTTTTTTAATAGTAAGAAACAAAAGCGGAACGTAGTTTTGTTTCTGTTTGGGGAAAGAAATTGTCAAGTCACGTGGAGGACGCTGATTCGCCCAAGGTTGGGTACTCAGATTCAGTGGCACATCCATAAATTTTGTTGAGAGAGGGCTTCATACTAATTTGCAAATAAGTACTTCGTAAATATGGTATACAAATTTGGTCTTGAATATTACAATTGTAATCCGTAATTCTAGTTTTTAGACTAGATTTTGCAGATAATTTTTCTAAATTCAATTACGTAATTTTTTCACGATGATGACTTCATCCATTTTTTTTATAGTATAGATTTCAAATTAAATCTACAATAATATTAATAAAAATAAAATAAAAAGTTAAACACATAAAATATAAATGATAATAATTCTAATGTATACACCACAATTTTATATTATAGTCTAAACTTTTAAAAGTAGTTGAAACATGACAATTTTATATTTTAGTTCAAATTTTTACCAACTATTACATTTAAAATAACGTCAAATAGTAAAATTCATAGTATATAAGATGTAAAGTTACTAAAAATTTACCTTAGACTGAGTTCGACCTTGACTAAGGTTTGACCTAGTGCAATTCTTTGCATTAGCATTTGACATCGTCTATGGGGAGGACATTTCTAAGTCATCTCAACTAAAAGCAGTCTCAGATGGTTCAACTAACCACTTCTGTTAATTTGGCAAACCGATGAGGTCTGAATGGCAACAATAGCCTCCCACGCGAGGTTGATGTTAAGGCTATAGACGATCACCGCCAGGGAGACCGAGTGGGCGACCAACCACGCAGGTCGGCTCGCAATGCCAACATGGCTTTGCCGTATACTCATCTGTGGCCCCCCAAGACCCACCGAGGTCGAGGTGGAGCATCGAAAAGAACTTCACGCAGGTCCGTACCAGCGACGGATCCTGATGTTCTAGCTACATTGCAACGGGAGCTTTATGACATGCGTAATCGAGTGCGCACAATGGAGGAAACCTACAATAAAATAATGCGAGCGAACTGAACTGGGTCCCAATCCAGGGTCTAGGGCGGCGGAGACGACCTGCAGTATGAAGGGGATGATCAAAATCCTCCTCTCCATCGTGACGATGATAACCTGCACGTTGGTGACAATGGGGGGGGGAGTTGACTATAGTCGTTAAGAGGACAACATAAGGAAGGTTATAGTCGATAAAAAAAGGAAGAACTCCATCTCATGAGGCGCGGACGTCTCTCCTTCTTGCTCCCGAAAGAACTCCAACTTCAAAGCCTAGTCTCGTTACAATCCATTAACACCCTAAGGGGTGATTACGATAGAATAGTTCGACCTGATGAAAAAAACAAGTTCGATGCACAGATTGAGGCTTTAAAGGCACGATGCGAAAAGAAAGAAAATGTGCTTGATGACGGCGAAATGGGTGAGTCGCCGTTTATCTCGGACATCCTGGAGGCGCCCATCCCTTCCATGTTCAAGACGTCCGCCATGAAACCTTATGATGGGTCGAAGGACCCGAAGGACTATGTCGAGGTCTTTGAGGGCCTCATGGATTTACAGGCACCTTTGAACGTCATCAAGTGCCGAGCATTTCAGATAGCCCATAACTGGGAGTGCTCGACTCTGGTACAGAAGGCTACCAGCCAGGTCGATCTCGACTTACTGTCAGCTGAGGAAGGAATTTATTAA

mRNA sequence

ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCCAGGTCCGCCCAAGTGTTCAGGTCGGTCCGGAGGCCGAGTTCGAGCTACAATCGGGAACACACTGTTGTCTGAATGGCAACAATAGCCTCCCACGCGAGGTTGATGTTAAGGCTATAGACGATCACCGCCAGGGAGACCGAGTGGGCGACCAACCACGCAGGTCGGCTCGCAATGCCAACATGGCTTTGCCGTATACTCATCTGTGGCCCCCCAAGACCCACCGAGGTCGAGGTGGAGCATCGAAAAGAACTTCACGCAGGTCCGTACCAGCGACGGATCCTGATGTTCTAGCTACATTGCAACGGGAGCTTTATGACATGCGTAATCGAGGCGGCGGAGACGACCTGCAGTATGAAGGGGATGATCAAAATCCTCCTCTCCATCGTGACGATGATAACCTGCACGTTGAACTCCAACTTCAAAGCCTAGTCTCGTTACAATCCATTAACACCCTAAGGGGTGATTACGATAGAATAGTTCGACCTGATGAAAAAAACAAGTTCGATGCACAGATTGAGGCTTTAAAGGCACGATGCGAAAAGAAAGAAAATGTGCTTGATGACGGCGAAATGGGTGAGTCGCCGTTTATCTCGGACATCCTGGAGGCGCCCATCCCTTCCATGTTCAAGACGTCCGCCATGAAACCTTATGATGGGTCGAAGGACCCGAAGGACTATGTCGAGGTCTTTGAGGGCCTCATGGATTTACAGGCACCTTTGAACGTCATCAAGTGCCGAGCATTTCAGATAGCCCATAACTGGGAGTGCTCGACTCTGGTACAGAAGGCTACCAGCCAGGTCGATCTCGACTTACTGTCAGCTGAGGAAGGAATTTATTAA

Coding sequence (CDS)

ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCCAGGTCCGCCCAAGTGTTCAGGTCGGTCCGGAGGCCGAGTTCGAGCTACAATCGGGAACACACTGTTGTCTGAATGGCAACAATAGCCTCCCACGCGAGGTTGATGTTAAGGCTATAGACGATCACCGCCAGGGAGACCGAGTGGGCGACCAACCACGCAGGTCGGCTCGCAATGCCAACATGGCTTTGCCGTATACTCATCTGTGGCCCCCCAAGACCCACCGAGGTCGAGGTGGAGCATCGAAAAGAACTTCACGCAGGTCCGTACCAGCGACGGATCCTGATGTTCTAGCTACATTGCAACGGGAGCTTTATGACATGCGTAATCGAGGCGGCGGAGACGACCTGCAGTATGAAGGGGATGATCAAAATCCTCCTCTCCATCGTGACGATGATAACCTGCACGTTGAACTCCAACTTCAAAGCCTAGTCTCGTTACAATCCATTAACACCCTAAGGGGTGATTACGATAGAATAGTTCGACCTGATGAAAAAAACAAGTTCGATGCACAGATTGAGGCTTTAAAGGCACGATGCGAAAAGAAAGAAAATGTGCTTGATGACGGCGAAATGGGTGAGTCGCCGTTTATCTCGGACATCCTGGAGGCGCCCATCCCTTCCATGTTCAAGACGTCCGCCATGAAACCTTATGATGGGTCGAAGGACCCGAAGGACTATGTCGAGGTCTTTGAGGGCCTCATGGATTTACAGGCACCTTTGAACGTCATCAAGTGCCGAGCATTTCAGATAGCCCATAACTGGGAGTGCTCGACTCTGGTACAGAAGGCTACCAGCCAGGTCGATCTCGACTTACTGTCAGCTGAGGAAGGAATTTATTAA

Protein sequence

MLSMRAEVNLAQVRPSVQVGPEAEFELQSGTHCCLNGNNSLPREVDVKAIDDHRQGDRVGDQPRRSARNANMALPYTHLWPPKTHRGRGGASKRTSRRSVPATDPDVLATLQRELYDMRNRGGGDDLQYEGDDQNPPLHRDDDNLHVELQLQSLVSLQSINTLRGDYDRIVRPDEKNKFDAQIEALKARCEKKENVLDDGEMGESPFISDILEAPIPSMFKTSAMKPYDGSKDPKDYVEVFEGLMDLQAPLNVIKCRAFQIAHNWECSTLVQKATSQVDLDLLSAEEGIY
Homology
[Close]
BLAST of Moc02g17280 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 152.9 bits (385), Expect = 4.2e-33
Identity = 108/271 (39.85%), Postives = 139/271 (51.29%), Query Frame = 0 

Query: 29  SGTHCCLNGNNSLPREVDVKAIDDHRQGDRVGDQP-RRSARNANMALPYTHLWPPKTHRG 88
           +G    L  N+   REV  + ++     + +G +P  RSAR     L   H  P K +RG
Sbjct: 10  TGDRRALVANDGHQREVGAEVVEGQIH-EGLGTEPFCRSARITTPDLSPAHPKPFKANRG 69

Query: 89  RGGASKRTSRRSVPATDPDVLATLQRELYDMRNR---------------GGGDDLQ---- 148
           RGGAS+RT+  + PA   +    LQ+E+  MR +               G G   +    
Sbjct: 70  RGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAGSRSEDRAA 129

Query: 149 --YEGD---------------DQNPPLHRDDDNLHVELQLQSLVSLQSINTLRGDYDRIV 208
               GD                ++P     + N   E     +V    I   R ++D++ 
Sbjct: 130 RDERGDLRDHLSRKRSSSLRKGRSPSCSHKNSNQQAESSYNPVVPEGVIT--REEFDQL- 189

Query: 209 RPDEKNKFDAQIEALKARCEKKENVLDDGEMGESPFISDILEAPIPSMFKTSAMKPYDGS 263
               K+KFDAQ+E LKARCE K +  DDG++GESPF SDILEA IPS FKT  MKPYDGS
Sbjct: 190 ----KSKFDAQVETLKARCEVKGSTFDDGDLGESPFTSDILEALIPSKFKTPTMKPYDGS 249

[Close]
BLAST of Moc02g17280 vs. NCBI nr
Match: XP_022159250.1 (uncharacterized protein LOC111025663 [Momordica charantia])

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-30
Identity = 69/87 (79.31%), Postives = 74/87 (85.06%), Query Frame = 0 

Query: 176 KNKFDAQIEALKARCEKKENVLDDGEMGESPFISDILEAPIPSMFKTSAMKPYDGSKDPK 235
           K+KFD Q+EALKARCEKKE   DDG++GESPF SDILEAPIP  FKT  MKPYDGSKDPK
Sbjct: 2   KHKFDEQVEALKARCEKKECSFDDGDLGESPFTSDILEAPIPPKFKTPTMKPYDGSKDPK 61

Query: 236 DYVEVFEGLMDLQAPLNVIKCRAFQIA 263
           DYVEVFEGLMD QA  + IKCRAFQIA
Sbjct: 62  DYVEVFEGLMDFQAATDAIKCRAFQIA 88

[Close]
BLAST of Moc02g17280 vs. NCBI nr
Match: XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-29
Identity = 67/87 (77.01%), Postives = 73/87 (83.91%), Query Frame = 0 

Query: 176 KNKFDAQIEALKARCEKKENVLDDGEMGESPFISDILEAPIPSMFKTSAMKPYDGSKDPK 235
           K+KFDAQ+EALK RCEKKE+  DDG++GESPF SDILEA IP  FKT  MK YDGSKDPK
Sbjct: 108 KSKFDAQVEALKVRCEKKESAFDDGDLGESPFTSDILEASIPPKFKTPTMKSYDGSKDPK 167

Query: 236 DYVEVFEGLMDLQAPLNVIKCRAFQIA 263
           DYVEVFEGLMD QA  + IKCRAFQIA
Sbjct: 168 DYVEVFEGLMDFQAATDAIKCRAFQIA 194

[Close]
BLAST of Moc02g17280 vs. NCBI nr
Match: XP_022151719.1 (uncharacterized protein LOC111019634 [Momordica charantia])

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-29
Identity = 69/99 (69.70%), Postives = 80/99 (80.81%), Query Frame = 0 

Query: 164 RGDYDRIVRPDEKNKFDAQIEALKARCEKKENVLDDGEMGESPFISDILEAPIPSMFKTS 223
           R ++D++     K+KFDAQ+EALKA+CEKKE+  DDG++GESPF SDILEA IP  FKT 
Sbjct: 109 REEFDQL-----KSKFDAQVEALKAKCEKKESSFDDGDLGESPFTSDILEALIPLKFKTP 168

Query: 224 AMKPYDGSKDPKDYVEVFEGLMDLQAPLNVIKCRAFQIA 263
            MKPYDGSKDPKDYVEVFEGLMD QA  + IKCR FQIA
Sbjct: 169 TMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRDFQIA 202

[Close]
BLAST of Moc02g17280 vs. NCBI nr
Match: XP_022155139.1 (uncharacterized protein LOC111022280 [Momordica charantia])

HSP 1 Score: 139.8 bits (351), Expect = 3.7e-29
Identity = 79/155 (50.97%), Postives = 99/155 (63.87%), Query Frame = 0 

Query: 111 LQRELYDMRNRGG---GDDLQYEGDDQNPPLHRDDDNLHVELQLQSLVSLQSINTLRGDY 170
           L++ L D + +      D L Y  +  N        NL  + + + L+    IN  R ++
Sbjct: 39  LRKHLTDKKKKASWEPEDSLSYSREFSN-------SNLKAQSKYKPLIPEAVIN--REEF 98

Query: 171 DRIVRPDEKNKFDAQIEALKARCEKKENVLDDGEMGESPFISDILEAPIPSMFKTSAMKP 230
           D +     K++FD Q+EALKARCEKKE+  DD ++GESPF SDI+EAPIP  FKT  MKP
Sbjct: 99  DLM-----KHRFDEQVEALKARCEKKESPFDDDDLGESPFTSDIMEAPIPPKFKTPTMKP 158

Query: 231 YDGSKDPKDYVEVFEGLMDLQAPLNVIKCRAFQIA 263
           YDGSKDPKDYVEVFEGLMD QA  + IKC AFQIA
Sbjct: 159 YDGSKDPKDYVEVFEGLMDFQAATDAIKCLAFQIA 179

[Close]
BLAST of Moc02g17280 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.0e-33
Identity = 108/271 (39.85%), Postives = 139/271 (51.29%), Query Frame = 0 

Query: 29  SGTHCCLNGNNSLPREVDVKAIDDHRQGDRVGDQP-RRSARNANMALPYTHLWPPKTHRG 88
           +G    L  N+   REV  + ++     + +G +P  RSAR     L   H  P K +RG
Sbjct: 10  TGDRRALVANDGHQREVGAEVVEGQIH-EGLGTEPFCRSARITTPDLSPAHPKPFKANRG 69

Query: 89  RGGASKRTSRRSVPATDPDVLATLQRELYDMRNR---------------GGGDDLQ---- 148
           RGGAS+RT+  + PA   +    LQ+E+  MR +               G G   +    
Sbjct: 70  RGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAGSRSEDRAA 129

Query: 149 --YEGD---------------DQNPPLHRDDDNLHVELQLQSLVSLQSINTLRGDYDRIV 208
               GD                ++P     + N   E     +V    I   R ++D++ 
Sbjct: 130 RDERGDLRDHLSRKRSSSLRKGRSPSCSHKNSNQQAESSYNPVVPEGVIT--REEFDQL- 189

Query: 209 RPDEKNKFDAQIEALKARCEKKENVLDDGEMGESPFISDILEAPIPSMFKTSAMKPYDGS 263
               K+KFDAQ+E LKARCE K +  DDG++GESPF SDILEA IPS FKT  MKPYDGS
Sbjct: 190 ----KSKFDAQVETLKARCEVKGSTFDDGDLGESPFTSDILEALIPSKFKTPTMKPYDGS 249

[Close]
BLAST of Moc02g17280 vs. ExPASy TrEMBL
Match: A0A6J1DY58 (uncharacterized protein LOC111025663 OS=Momordica charantia OX=3673 GN=LOC111025663 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.5e-31
Identity = 69/87 (79.31%), Postives = 74/87 (85.06%), Query Frame = 0 

Query: 176 KNKFDAQIEALKARCEKKENVLDDGEMGESPFISDILEAPIPSMFKTSAMKPYDGSKDPK 235
           K+KFD Q+EALKARCEKKE   DDG++GESPF SDILEAPIP  FKT  MKPYDGSKDPK
Sbjct: 2   KHKFDEQVEALKARCEKKECSFDDGDLGESPFTSDILEAPIPPKFKTPTMKPYDGSKDPK 61

Query: 236 DYVEVFEGLMDLQAPLNVIKCRAFQIA 263
           DYVEVFEGLMD QA  + IKCRAFQIA
Sbjct: 62  DYVEVFEGLMDFQAATDAIKCRAFQIA 88

[Close]
BLAST of Moc02g17280 vs. ExPASy TrEMBL
Match: A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.1e-30
Identity = 67/87 (77.01%), Postives = 73/87 (83.91%), Query Frame = 0 

Query: 176 KNKFDAQIEALKARCEKKENVLDDGEMGESPFISDILEAPIPSMFKTSAMKPYDGSKDPK 235
           K+KFDAQ+EALK RCEKKE+  DDG++GESPF SDILEA IP  FKT  MK YDGSKDPK
Sbjct: 108 KSKFDAQVEALKVRCEKKESAFDDGDLGESPFTSDILEASIPPKFKTPTMKSYDGSKDPK 167

Query: 236 DYVEVFEGLMDLQAPLNVIKCRAFQIA 263
           DYVEVFEGLMD QA  + IKCRAFQIA
Sbjct: 168 DYVEVFEGLMDFQAATDAIKCRAFQIA 194

[Close]
BLAST of Moc02g17280 vs. ExPASy TrEMBL
Match: A0A6J1DDW5 (uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019634 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.0e-30
Identity = 69/99 (69.70%), Postives = 80/99 (80.81%), Query Frame = 0 

Query: 164 RGDYDRIVRPDEKNKFDAQIEALKARCEKKENVLDDGEMGESPFISDILEAPIPSMFKTS 223
           R ++D++     K+KFDAQ+EALKA+CEKKE+  DDG++GESPF SDILEA IP  FKT 
Sbjct: 109 REEFDQL-----KSKFDAQVEALKAKCEKKESSFDDGDLGESPFTSDILEALIPLKFKTP 168

Query: 224 AMKPYDGSKDPKDYVEVFEGLMDLQAPLNVIKCRAFQIA 263
            MKPYDGSKDPKDYVEVFEGLMD QA  + IKCR FQIA
Sbjct: 169 TMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRDFQIA 202

[Close]
BLAST of Moc02g17280 vs. ExPASy TrEMBL
Match: A0A6J1DPC9 (uncharacterized protein LOC111022280 OS=Momordica charantia OX=3673 GN=LOC111022280 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-29
Identity = 79/155 (50.97%), Postives = 99/155 (63.87%), Query Frame = 0 

Query: 111 LQRELYDMRNRGG---GDDLQYEGDDQNPPLHRDDDNLHVELQLQSLVSLQSINTLRGDY 170
           L++ L D + +      D L Y  +  N        NL  + + + L+    IN  R ++
Sbjct: 39  LRKHLTDKKKKASWEPEDSLSYSREFSN-------SNLKAQSKYKPLIPEAVIN--REEF 98

Query: 171 DRIVRPDEKNKFDAQIEALKARCEKKENVLDDGEMGESPFISDILEAPIPSMFKTSAMKP 230
           D +     K++FD Q+EALKARCEKKE+  DD ++GESPF SDI+EAPIP  FKT  MKP
Sbjct: 99  DLM-----KHRFDEQVEALKARCEKKESPFDDDDLGESPFTSDIMEAPIPPKFKTPTMKP 158

Query: 231 YDGSKDPKDYVEVFEGLMDLQAPLNVIKCRAFQIA 263
           YDGSKDPKDYVEVFEGLMD QA  + IKC AFQIA
Sbjct: 159 YDGSKDPKDYVEVFEGLMDFQAATDAIKCLAFQIA 179

The following BLAST results are available for this feature:
BLAST of Moc02g17280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159327.14.2e-3339.85uncharacterized protein LOC111025738 [Momordica charantia][more]
XP_022159250.11.1e-3079.31uncharacterized protein LOC111025663 [Momordica charantia][more]
XP_022156088.11.3e-2977.01uncharacterized protein LOC111023060 [Momordica charantia][more]
XP_022151719.11.7e-2969.70uncharacterized protein LOC111019634 [Momordica charantia][more]
XP_022155139.13.7e-2950.97uncharacterized protein LOC111022280 [Momordica charantia][more]
BLAST of Moc02g17280 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc02g17280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZJ12.0e-3339.85uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DY585.5e-3179.31uncharacterized protein LOC111025663 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DPN46.1e-3077.01uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DDW58.0e-3069.70uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6J1DPC91.8e-2950.97uncharacterized protein LOC111022280 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
BLAST of Moc02g17280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 176..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc02g17280.1Moc02g17280.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity