Moc02g17080 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g17080
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr2: 12825523 .. 12831186 (+)
RNA-Seq Expression	Moc02g17080
Synteny	Moc02g17080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCATGGCATGGCTCATTAACTCGATGGAGGAGGACATTAAAGAATTCTTCATCTTCTGCTCAACAGCAAAGGATCTTTGGAATGCGCTCACTATGGCTTTTTCTGATTTTGATAACTCGGCTCAATTGTTGAATTACGCAATAAGGCACGTTCCTTACGACAAGGTGAATCCGATGTCACCCAATACTACAGCTCATTACGTAGGTTGTGGGCTGAACTTGATTTATGTCTCAATCTCGAATGGGAGAACTCGAAGGATGCTGAACGCTTCCACAAACACGTCGAGAAGGAACGAATTTATGATTTTCTTGCAGGTCTTCGTCCGGAATTAGATGATGTGCGTGGCCGCTTACTTGCCACAAAGCCAATCTCAGCCATTGACGAAATCTTCGCAGAAGTTCGCTGGGAGTCAAGCCGTAAACGTGTGATGATGGGTGATACACACACAAAACCTCTGTCCCTCTCACTGGAATCATCAGCTCTGGCGGCACGAGGTACACCACCACCTTCATCCCGATCTACACGTCGGAACAACCTATGGTGTGATCATTGTAAGTGAATAAACCATACAAAAGATCGGTGTTGGGAACTCCATGGTCGTCCTCAATGGAAGAATTTATCAGGGGATTATTGGCCACCTCCACCTACAAATACTCCATCTTCTCGAACCAGCTCCTCCGGCTATCAAGTGGGCCCTAGTGTGTCAAACTCCCAAGATTTGGCCATCTCTCTCCCTCCATTTCCGAAGGCACAACTTGAACAACTCTATCGCCTCTTAACACCGCCGGTTGAGTCTACTCCTTCGTCAAGTTTTGTGGCACAACGAGGTATTTTTAGTGCAGCTTTAACAAGTCAGCAGCATTCCGATCAGTGGATCTTAGATTCGGGTGCAACTGATCATATGACCGTTTTTCATGATATGTTTACCATGTACTCACCCAACCCGATTCAGACACATGTCAAGCTTGCAGATGGGTCATCGGCCATTATTAAGGGCTTTGGTTCTATTATTCTTAGCCCAAACATTACATTGCACTCAGTGCTCCATGTGCCTAAATTATGTTGCAATCTAATTTCTGTTCAGAAGTTGACTCATGATTTAAAGTGTCAAGCCCTGTTCACTGACTCTAAGTGTTTGTTTCAGGACTTGATAACGGGCATGACGATTGGCAATGCTGATGGCTTTGAAGGGCTCTACTACTTCAGAGGACCAAGTCTAAGAAATAAACAAGTTCTCCAGGTTGGTAGTGAGTCGAATTCTAGGGAACAACAAATTCTACTTTTACATCGCCGTTTAGGGCACCCGAGTTTTCAGTATCTTAAACATTTGTACCCTTCACTTTTTCATAAAGATGACCATTTTACTTGCGAAGTGTGTCAACTTGCAAAACACTCTCGTACATCTTATCCTTCTGTTGAGTATATACCATCCAGTCCATTCACAATGATTCATAGTTATTTATGGGGGCTGTCTCGCATCAAAACTATGTCCGGTAAGCGTTGGTTCCTTACCTTCACTGATGACCACACTAGGGTTTGTTGGGTCTATTTACTTAAAGAAAAATCAGAAACTGCATCAATCTTTCAACAGTTTCATTCTCTCATTCATAATCAATTTAATACGAGAATCAAAATTCTTCGGCACAGATAAGGGGACAGAATATTTTAATCAAATATTGGGAACTTTCCTGTCTCAAAATGGAATCATTCACCAAAGTTCCTGTGTCATTACCCCCAACAAAATGGTATAGCTGAAAGGAAAAATAGGCATCTTTTAGAAACTGCTCGTGCTCTCATGTTCACCAATTCTGTTCCTAACTGTTTTTGGGGTGATGCTGTCCTTACTGCTTGTTATCTCATTAATCGGATGCCCTCTCGTGTTTTGAAATTTAACACTCCACTAGAAATCTTACTCACTATCTATCCGCAAATCCGATCTGTCCTCACAATTCCCCTCAAAATATTTGGATGTACTGCATTCACTCATGTTTATGATCATGAACGTCACAAATTGGAGCCAAAAGCCAGAAAGTGTGTCTTCCTTGGTTACTCTCCTACTCAAAAAGGCTATAAATGCTATTGTCCATTCACCAATAAATTTTACACTACCATGGATGTCACATTTTTTGAGTCTCAATCTTTTTCTCCCTAAATTCCCCTCAGGGAGAGACTGAGCCTATTACAAGTAGTCTTGATGGAAATTTTTGGGAGATTGACGATCTAAATACCAGAATTGAGTCCCCTCAGTCAAAAATACCTGAGATTGATGGTCTAAATATCGAGTCACCTCAGCCAAAAATACCTATCCTGATCGTCCCAATTACTCAGATAGAAGAGTCAGTTCCTATTATTTCCTGTAATAATGAAGATGATCAAGTCAACCCAAATCGAAGTGACAAGCAACCAGAGACTCTTGTTTATTCTCGGCGACCAACGGTTCAAAGAGGAGTGGAGCCACCACAGCCTCAACAGCAAAGTCATGAATCCATCTCGTCCTTAGGTACGGAACAATCTACCCTTGTGCCTCAAGACAATACTAATGATCTTGATCTTCCTATTGCACTTAGGAAGGGTGTGAGATCGTGTACTCAACATCCAATTGCTCGATGTATTGGTTATAGTCATTTATCTTCAGCAGTTCAGACCTTGGCTCTCAATCTGGAAGCCAATGAGGTACCAAAATCCATTCAAGAGGCTATGAGCAATTCACAGTGGAAAAATGCGGTAGATGATGAAATGAAGGCTTTGAAGCTTAATGATACGTGGACAGTAGTTGATCGTCCTCAAGATAAACCAACAGTAGGATGCCGATGGATCTTTACTGTCAAATATAAGGCTGATGGGTCCATTGAAAGGTATAAAGCAAGATTGGTGGCCAAAGGATACTCTCAGACTTTTGGGGTAGACTATCAGGAGACATTTGCACCCGTTGCAAAATTAAACACAATCCGTGTCCTCTTGTCTCTTGCTGCAAATCTGGATTGTAAACTATAACAACTGGATGTCAAGAATGCATTCCTCAATGGAGATTTGGAAGAAGAGGTGTACATGGACCTTCCTCCTGGATTTGACATTGATAAGTATGATGGAAAGGTGTGTAAGGTGAAGAAATCTCTCTATGGTTTAAAAAAATCCCCACGTGCATGGTTCGGGCGATTTTCAAAGGCTGTTTGTAAACAAGGATATACCCAAGCTCAAACTGAACATACAATGTTCTATAGGCACTCTCAAGGTAAGATCACCATCCTCATTGTTTATGTCGATGATATTATTGTCACAGGTGACCATCATGAAGAAATAGAGAGACTAAAACAGGCACTTGGAAAGGAGTTCGAAATAAAGGACCTGGTAACACTTCGGTATTTTCTAGGGATGGAAGTTGCTAGGAGCAGAACTGGTATATTTGTGTGTCAAAGAAAATATGTACTAGACCTCTTGAAGGAAACCGGAATGCTTGGATGTAAACCATCTGATACTCCAATAAGTCCCAATCATAAGTTGGGAGAGAGCCTAGATGGGGTACCCGTTGATAAAGGGAGATATCAGCGTCTTGTTGGAAGATTAATCTATTTATCCCATACTAGGCCGGATATTGCATTTGCAGTGAGTGTTGTAAGTCAATACATGCATGCTCCTACTGAAGAACACATGGAAGCCGTGTATCATATTCTTAGATATCTTAAAGGAACTCCAGGGCTTGGATTATTTTTCGGAAAGGATGATGACAGAAAGATTAAGGTGTTTACAGATGCTGATTGGGCAGGTTCTATTCAAGATAGGAGATCTACGACAGGATATTGTACCTTCGTATGGGGTAATCTTGTTACATGGAGGAGTAAGAAACAATCAGTGGTTGCAAGAAGTAGTGCTGAGGCTGAATTCAGGGCATTATCTCATGGTATTTGTGAGATAATGTGGCTGAAACTCCTCCTCCAAGAACTCAAGATCAGGTTTGATAGTTCAATGGAAGTCTATTGTGACAACAAGGCTGCAATTGCTATTGCACACAATCCAGTGCATCATGATCGTACTAAACATGTTGAGGTTGACATGCATTTTATCAAGGAGAAGATTGAAGAGAAAATTATAAATCTGATGTCTGTTCCATCATCAGATCAAGTTGCAGATATCCTAACAAAAGGACTCTTGAGACCCGTATTTGAAAGGTTGTTGATCAAGCTGAAACTGTTCAATCTGTATAGTCCAGCTTGAGGGGGAGTGTTGAATTAGTTAGAAGTTAAGATTATGTGGACTTAGTTAGAAGTTGTTTTAAAGTTGTTTAGATTTTGTGTTTAAATTTAGCAAATAAATCTCCTTTTTTGTTAGGGAAGTTAGGAGGTTATTCCTAGATTTCGTTTCCTCTTGTAACCTATAAATAGTGCCTCTATTCCTCATCTTTGATCAATCAATTTGAGAATTTATTTCTTCTCTCTTTTCTCGTGTATGTCTCTCTGGTGTCTCTATCCTTAGTTTTTACCTTTCAATCTTGATTAGGCGGCCTAATGCTACCTTAAAGGGAAATGTTATTTGGGTTCAAATCAGGGTGGTCGTCTACCTAGGATATAATATCCTACGGGTTATTTTGGCAACCAAATGTAGTAGAGTCTGATGGTTGCCCGAACACTCGCCGATATAAAGAAAAGAAAAAACTATCATAAAATATTATTATGCACAGGCATACAAGTTTCTCGTTCCGTTTAATATATTATTCATGAATACTTCACACGGAGTGTAAAATGACAGTTTCAAGTCTATATCTTCTAACCATATCAATGTAACTTCTGATATTTGGGATGATGATTTGCATTATTAATATCGTTTATGTCAGTTACTCCTTTACCATTAACTTAGTGTTAAGCGTGCCAATAAATATGCCTGGAACAGACATTATGGATGGGAAAAAAATTCAGATCTCAAAAGTTCCTCTCTTAACAGATTTTTCTTTCCTTTAATTGAAATATTATTCTTTTGAAGCCATTTCTAACACTCCTCTCACCTGTGGGCTTGGATAATTGCACAAATGTTCAACAACTGAAAATCATAATATATGGAGAGGAAACAACGATTGGAACAAATAATTGAACTCCTCGAGTCTAGAACTTTGGAGTTTCCAGAAATACAAGATTCAGCATTAGGAGGTGAGAATGTATAAGATAAATCCCCCGGACCCCGAGCGAATGATAAGGTAAAGTCGGAGCTTATATTATTTCCACACACAGTTTTTTATTTCTTTGGATATGGAGCTGTCATTTTCAGAAATAATAATCATAATAATAATGAAGTTGTATAACTGTAATGAAGTAAAAAGTTGGTAAAGTAATAACTTTGATGAATGTAATGAATTATTTTATGAAAAGAAATGAGTTCAGAAGTAATTTGAATCAACTTAAAATAATTTTAGATATTTGGAAAGCGTGTCTGGAACTAATTTCAATATACTACTACATTTTATATAATTTTTGGGGGAAAAACAATGATAAATCATTAACCAAAAGCACGCACTTGTAGTTGACAATTGCCAAATTTACACACCTCAACTAATTTCCAAGACAACCACATAATCCTACAATATTAAGTTGCAGGACGAAATTAAACCAAATGATGGACACGAAACTCTGAATGCTTATGAAGAGCGGTATGTTTACATGATTGAAATTTGA

mRNA sequence

ATGGTCATGGCATGGCTCATTAACTCGATGGAGGAGGACATTAAAGAATTCTTCATCTTCTGCTCAACAGCAAAGGATCTTTGGAATGCGCTCACTATGGCTTTTTCTGATTTTGATAACTCGGCTCAATTGTTGAATTACGCAATAAGGCACGTTCCTTACGACAAGAACTCGAAGGATGCTGAACGCTTCCACAAACACGTCGAGAAGGAACGAATTTATGATTTTCTTGCAGGTCTTCGTCCGGAATTAGATGATGTGCGTGGCCGCTTACTTGCCACAAAGCCAATCTCAGCCATTGACGAAATCTTCGCAGAAGTTCGCTGGGAGTCAAGCCGTAAACGTGTGATGATGGGTGATACACACACAAAACCTCTGTCCCTCTCACTGGAATCATCAGCTCTGGCGGCACGAGGGGATTATTGGCCACCTCCACCTACAAATACTCCATCTTCTCGAACCAGCTCCTCCGGCTATCAAGTGGGCCCTAGTGTGTCAAACTCCCAAGATTTGGCCATCTCTCTCCCTCCATTTCCGAAGGCACAACTTGAACAACTCTATCGCCTCTTAACACCGCCGGTTGAGTCTACTCCTTCGTCAAGTTTTGTGGCACAACGAGGTATTTTTAGTGCAGCTTTAACAAGTCAGCAGCATTCCGATCAGTGGATCTTAGATTCGGGTGCAACTGATCATATGACCGTTTTTCATGATATGTTTACCATGTACTCACCCAACCCGATTCAGACACATGTCAAGCTTGCAGATGGGTCATCGGCCATTATTAAGGGCTTTGGTTCTATTATTCTTAGCCCAAACATTACATTGCACTCAGTGCTCCATGTGCCTAAATTATGTTGCAATCTAATTTCTGTTCAGAAGTTGACTCATGATTTAAAGTGTCAAGCCCTGTTCACTGACTCTAAGTGTTTGTTTCAGGACTTGATAACGGGCATGACGATTGGCAATGCTGATGGCTTTGAAGGGCTCTACTACTTCAGAGGACCAAGTCTAAGAAATAAACAAGTTCTCCAGGGAGAGACTGAGCCTATTACAAGTAGTCTTGATGGAAATTTTTGGGAGATTGACGATCTAAATACCAGAATTGAGTCCCCTCAGTCAAAAATACCTGAGATTGATGGTCTAAATATCGAGTCACCTCAGCCAAAAATACCTATCCTGATCGTCCCAATTACTCAGATAGAAGAGTCAGTTCCTATTATTTCCTGTAATAATGAAGATGATCAAGTCAACCCAAATCGAAGTGACAAGCAACCAGAGACTCTTGTTTATTCTCGGCGACCAACGGTTCAAAGAGGAGTGGAGCCACCACAGCCTCAACAGCAAAGTCATGAATCCATCTCGTCCTTAGGTACGGAACAATCTACCCTTGTGCCTCAAGACAATACTAATGATCTTGATCTTCCTATTGCACTTAGGAAGGGTGACGAAATTAAACCAAATGATGGACACGAAACTCTGAATGCTTATGAAGAGCGGTATGTTTACATGATTGAAATTTGA

Coding sequence (CDS)

ATGGTCATGGCATGGCTCATTAACTCGATGGAGGAGGACATTAAAGAATTCTTCATCTTCTGCTCAACAGCAAAGGATCTTTGGAATGCGCTCACTATGGCTTTTTCTGATTTTGATAACTCGGCTCAATTGTTGAATTACGCAATAAGGCACGTTCCTTACGACAAGAACTCGAAGGATGCTGAACGCTTCCACAAACACGTCGAGAAGGAACGAATTTATGATTTTCTTGCAGGTCTTCGTCCGGAATTAGATGATGTGCGTGGCCGCTTACTTGCCACAAAGCCAATCTCAGCCATTGACGAAATCTTCGCAGAAGTTCGCTGGGAGTCAAGCCGTAAACGTGTGATGATGGGTGATACACACACAAAACCTCTGTCCCTCTCACTGGAATCATCAGCTCTGGCGGCACGAGGGGATTATTGGCCACCTCCACCTACAAATACTCCATCTTCTCGAACCAGCTCCTCCGGCTATCAAGTGGGCCCTAGTGTGTCAAACTCCCAAGATTTGGCCATCTCTCTCCCTCCATTTCCGAAGGCACAACTTGAACAACTCTATCGCCTCTTAACACCGCCGGTTGAGTCTACTCCTTCGTCAAGTTTTGTGGCACAACGAGGTATTTTTAGTGCAGCTTTAACAAGTCAGCAGCATTCCGATCAGTGGATCTTAGATTCGGGTGCAACTGATCATATGACCGTTTTTCATGATATGTTTACCATGTACTCACCCAACCCGATTCAGACACATGTCAAGCTTGCAGATGGGTCATCGGCCATTATTAAGGGCTTTGGTTCTATTATTCTTAGCCCAAACATTACATTGCACTCAGTGCTCCATGTGCCTAAATTATGTTGCAATCTAATTTCTGTTCAGAAGTTGACTCATGATTTAAAGTGTCAAGCCCTGTTCACTGACTCTAAGTGTTTGTTTCAGGACTTGATAACGGGCATGACGATTGGCAATGCTGATGGCTTTGAAGGGCTCTACTACTTCAGAGGACCAAGTCTAAGAAATAAACAAGTTCTCCAGGGAGAGACTGAGCCTATTACAAGTAGTCTTGATGGAAATTTTTGGGAGATTGACGATCTAAATACCAGAATTGAGTCCCCTCAGTCAAAAATACCTGAGATTGATGGTCTAAATATCGAGTCACCTCAGCCAAAAATACCTATCCTGATCGTCCCAATTACTCAGATAGAAGAGTCAGTTCCTATTATTTCCTGTAATAATGAAGATGATCAAGTCAACCCAAATCGAAGTGACAAGCAACCAGAGACTCTTGTTTATTCTCGGCGACCAACGGTTCAAAGAGGAGTGGAGCCACCACAGCCTCAACAGCAAAGTCATGAATCCATCTCGTCCTTAGGTACGGAACAATCTACCCTTGTGCCTCAAGACAATACTAATGATCTTGATCTTCCTATTGCACTTAGGAAGGGTGACGAAATTAAACCAAATGATGGACACGAAACTCTGAATGCTTATGAAGAGCGGTATGTTTACATGATTGAAATTTGA

Protein sequence

MVMAWLINSMEEDIKEFFIFCSTAKDLWNALTMAFSDFDNSAQLLNYAIRHVPYDKNSKDAERFHKHVEKERIYDFLAGLRPELDDVRGRLLATKPISAIDEIFAEVRWESSRKRVMMGDTHTKPLSLSLESSALAARGDYWPPPPTNTPSSRTSSSGYQVGPSVSNSQDLAISLPPFPKAQLEQLYRLLTPPVESTPSSSFVAQRGIFSAALTSQQHSDQWILDSGATDHMTVFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSIILSPNITLHSVLHVPKLCCNLISVQKLTHDLKCQALFTDSKCLFQDLITGMTIGNADGFEGLYYFRGPSLRNKQVLQGETEPITSSLDGNFWEIDDLNTRIESPQSKIPEIDGLNIESPQPKIPILIVPITQIEESVPIISCNNEDDQVNPNRSDKQPETLVYSRRPTVQRGVEPPQPQQQSHESISSLGTEQSTLVPQDNTNDLDLPIALRKGDEIKPNDGHETLNAYEERYVYMIEI

Homology

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BLAST of Moc02g17080 vs. NCBI nr
Match: XP_022159153.1 (uncharacterized protein LOC111025577 [Momordica charantia])

HSP 1 Score: 525.4 bits (1352), Expect = 5.4e-145
Identity = 287/382 (75.13%), Postives = 295/382 (77.23%), Query Frame = 0


Query: 1   MVMAWLINSMEEDIKEFFIFCSTAKDLWNALTMAFSDFDNSAQLLNY-----AIRHVPYD 60
           MVMAWLINSMEEDIKE FIF STAKDLWNALTMAFSDFDNSAQL        ++R    D
Sbjct: 99  MVMAWLINSMEEDIKESFIFYSTAKDLWNALTMAFSDFDNSAQLFELHNKARSLRQGESD 158

Query: 61  -----------------------KNSKDAERFHKHVEKERIYDFLAGLRPELDDVRGRLL 120
                                  +NSKDAERF KHVEKERIYDFLAGLRPELDDVRGRLL
Sbjct: 159 VTQYYSSLRRLWAELDLCLNLEWENSKDAERFRKHVEKERIYDFLAGLRPELDDVRGRLL 218

Query: 121 ATKPISAIDEIFAEVRWESSRKRVMMGDTHTKPLSLSLESSALAARGDYWPPPPTNTPSS 180
           ATKPI AIDEIFAEV WESSRKRVMMGDTHTKPLSLSLESSALAARG    PPP+  P  
Sbjct: 219 ATKPIPAIDEIFAEVSWESSRKRVMMGDTHTKPLSLSLESSALAARG----PPPSKQPI- 278

Query: 181 RTSSSGYQVGPSVSNSQDLAISLPPFPKAQLEQLYRLLTPPVESTPSSSFVAQRGIFSAA 240
                                       AQLEQLYRLLT PVESTPSSSFVAQRGI SAA
Sbjct: 279 ----------------------------AQLEQLYRLLTLPVESTPSSSFVAQRGISSAA 338

Query: 241 LTSQQHSDQWILDSGATDHMTVFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSIILSPN 300
           LT QQHSDQWILDSGATDHMT FHDMFTMYSPNPIQTHVKLADGSSAIIKGFGS+ILSPN
Sbjct: 339 LTRQQHSDQWILDSGATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPN 398

Query: 301 ITLHSVLHVPKLCCNLISVQKLTHDLKCQALFTDSKCLFQDLITGMTIGNADGFEGLYYF 355
           ITLHSVL VPKLCCNLISVQKLTHDLKCQALFTDSKCLFQDLITG TIG+ADGFEGLYYF
Sbjct: 399 ITLHSVLXVPKLCCNLISVQKLTHDLKCQALFTDSKCLFQDLITGTTIGSADGFEGLYYF 447

[Close]

BLAST of Moc02g17080 vs. NCBI nr
Match: RVW98618.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 228.8 bits (582), Expect = 1.1e-55
Identity = 156/418 (37.32%), Postives = 215/418 (51.44%), Query Frame = 0


Query: 1   MVMAWLINSMEEDIKEFFIFCSTAKDLWNALTMAFSDFDNSAQLLN---------YAIRH 60
           +V+AWLINSME  I +  +F  TAKD+W A+   +SD +NS+Q+ +            R 
Sbjct: 97  LVIAWLINSMEPAIGKPHLFLPTAKDVWEAVRDMYSDLENSSQIFDLKSKLWQSRQGDRE 156

Query: 61  VPYDKNS-------------------KDAERFHKHVEKERIYDFLAGLRPELDDVRGRLL 120
           V    N                     D+ R  K  E +R+Y FLAGL   LD+VRGR+L
Sbjct: 157 VTTYYNQMVTLWQELDLCYEDEWDCPNDSVRHKKREENDRVYVFLAGLNHNLDEVRGRIL 216

Query: 121 ATKPISAIDEIFAEVRWESSRKRVMMGDTHTKPLSLSLESSALAARG------------- 180
             KP+ +I E+F+EVR E +R++VM+ D   K  +  +ESSAL ++G             
Sbjct: 217 GRKPLPSIREVFSEVRREEARRKVMLTDPEPKS-NPEIESSALVSKGSDSDGDRRKKPWC 276

Query: 181 DYWPPP-------------PTNTPSSRTSSS-GYQVGPSVSNSQDLAISLPPFPKAQLEQ 240
           D+   P             P N      S    +Q   + S    +    P F K QL  
Sbjct: 277 DHCKKPWHTKETCWKIHGKPQNFKKKNGSDGRAFQTMSADSQGPQINSEKPNFTKEQLSH 336

Query: 241 LYRLLTPPVESTPSSSFVAQRGIFSAALTSQQHSDQ--WILDSGATDHMTVFHDMFTMYS 300
           LY+L   P  S PS S   Q     AAL+S + +    WI+DSGATDHMT    +F+ Y 
Sbjct: 337 LYKLFQSPQFSNPSCSLAQQGNYLIAALSSIKSNVHCPWIIDSGATDHMTGSSQIFSSYK 396

Query: 301 PNPIQTHVKLADGSSAIIKGFGSIILSPNITLHSVLHVPKLCCNLISVQKLTHDLKCQAL 358
           P      +K+ADGS + I G GS+ +SP++TLH+VLHVP L CNL+S+ K+T D +CQA 
Sbjct: 397 PCAGNKKIKIADGSLSAIAGKGSVFISPSLTLHNVLHVPNLSCNLLSISKITQDHQCQAN 456

[Close]

BLAST of Moc02g17080 vs. NCBI nr
Match: XP_024044152.1 (uncharacterized protein LOC18046468 isoform X2 [Citrus clementina])

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-54
Identity = 152/396 (38.38%), Postives = 206/396 (52.02%), Query Frame = 0


Query: 1   MVMAWLINSMEEDIKEFFIFCSTAKDLWNALTMAFSDFDNSAQLLNYAIRHVPYDKNSK- 60
           M+M+WL+NSME++I + ++F  TAKDLW+A+T  +SD  NSAQ+ +   R     + S+ 
Sbjct: 244 MIMSWLVNSMEQEIGQTYLFLPTAKDLWDAVTETYSDLGNSAQIYDLKTRIRETKQGSQG 303

Query: 61  ---------------------------DAERFHKHVEKERIYDFLAGLRPELDDVRGRLL 120
                                      D+ ++ K +EKER+++FLAGL  +LD+VRGR+L
Sbjct: 304 VTKYYNILKGLWQELDQYYDGEWECAVDSAKYKKMLEKERVFEFLAGLSSDLDEVRGRVL 363

Query: 121 ATKPISAIDEIFAEVRWESSRKRVMMGDTH------------------TKPLSLSLESSA 180
             +P+ +  E+F+ VR E SRK VMMG +                   TK L  S E   
Sbjct: 364 GKEPLPSTREVFSYVRREESRKNVMMGGSSAENSALISVTPEAPLVGGTKNLKKSDEKDR 423

Query: 181 L---------AARGDYW-----PPPPTNTPSSRTSSSGYQ-VGPSVSNSQDLAISLPPFP 240
           +           R   W     PP   N   S   S G+Q VG +   +         F 
Sbjct: 424 VWCDYCHKPRHTRDACWKLHGKPPNLKNNKFSGKHSRGFQVVGENQPTTNTGETESQLFT 483

Query: 241 KAQLEQLYRLLTPPVESTPSSSF--VAQRG-IFSAALTSQQHSDQWILDSGATDHMTVFH 300
           K QLEQLYR L         SSF  +AQ+G  F+A     +  D WI+DSGATDHMT   
Sbjct: 484 KEQLEQLYRFLNQSQSLPNPSSFSSLAQKGNNFTALGVVYEKQDPWIIDSGATDHMTSHS 543

Query: 301 DMFTMYSPNPIQTHVKLADGSSAIIKGFGSIILSPNITLHSVLHVPKLCCNLISVQKLTH 333
            +F+ Y P      +K+ADGS + + G GSI +S N+ L SVLHVP L CNL+SV K+T 
Sbjct: 544 KLFSSYIPCSGSQKIKIADGSLSSVAGKGSIPISTNLVLTSVLHVPNLSCNLLSVSKITK 603

[Close]

BLAST of Moc02g17080 vs. NCBI nr
Match: XP_024044151.1 (uncharacterized protein LOC18046468 isoform X1 [Citrus clementina])

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-54
Identity = 152/396 (38.38%), Postives = 206/396 (52.02%), Query Frame = 0


Query: 1   MVMAWLINSMEEDIKEFFIFCSTAKDLWNALTMAFSDFDNSAQLLNYAIRHVPYDKNSK- 60
           M+M+WL+NSME++I + ++F  TAKDLW+A+T  +SD  NSAQ+ +   R     + S+ 
Sbjct: 436 MIMSWLVNSMEQEIGQTYLFLPTAKDLWDAVTETYSDLGNSAQIYDLKTRIRETKQGSQG 495

Query: 61  ---------------------------DAERFHKHVEKERIYDFLAGLRPELDDVRGRLL 120
                                      D+ ++ K +EKER+++FLAGL  +LD+VRGR+L
Sbjct: 496 VTKYYNILKGLWQELDQYYDGEWECAVDSAKYKKMLEKERVFEFLAGLSSDLDEVRGRVL 555

Query: 121 ATKPISAIDEIFAEVRWESSRKRVMMGDTH------------------TKPLSLSLESSA 180
             +P+ +  E+F+ VR E SRK VMMG +                   TK L  S E   
Sbjct: 556 GKEPLPSTREVFSYVRREESRKNVMMGGSSAENSALISVTPEAPLVGGTKNLKKSDEKDR 615

Query: 181 L---------AARGDYW-----PPPPTNTPSSRTSSSGYQ-VGPSVSNSQDLAISLPPFP 240
           +           R   W     PP   N   S   S G+Q VG +   +         F 
Sbjct: 616 VWCDYCHKPRHTRDACWKLHGKPPNLKNNKFSGKHSRGFQVVGENQPTTNTGETESQLFT 675

Query: 241 KAQLEQLYRLLTPPVESTPSSSF--VAQRG-IFSAALTSQQHSDQWILDSGATDHMTVFH 300
           K QLEQLYR L         SSF  +AQ+G  F+A     +  D WI+DSGATDHMT   
Sbjct: 676 KEQLEQLYRFLNQSQSLPNPSSFSSLAQKGNNFTALGVVYEKQDPWIIDSGATDHMTSHS 735

Query: 301 DMFTMYSPNPIQTHVKLADGSSAIIKGFGSIILSPNITLHSVLHVPKLCCNLISVQKLTH 333
            +F+ Y P      +K+ADGS + + G GSI +S N+ L SVLHVP L CNL+SV K+T 
Sbjct: 736 KLFSSYIPCSGSQKIKIADGSLSSVAGKGSIPISTNLVLTSVLHVPNLSCNLLSVSKITK 795

[Close]

BLAST of Moc02g17080 vs. NCBI nr
Match: RVW38706.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-54
Identity = 167/466 (35.84%), Postives = 240/466 (51.50%), Query Frame = 0


Query: 59  KDAERFHKHVEKERIYDFLAGLRPELDDVRGRLLATKPISAIDEIFAEVRWESSRKRVMM 118
           KD +RF   + KERIYDFLAGL  +LD VR R+LA K +  I+E+FAEVR E + KRVM+
Sbjct: 483 KDCKRFKARINKERIYDFLAGLNQDLDVVRSRILAIKSLPEIEEVFAEVRREETHKRVML 542

Query: 119 GDTHTKPLSLSLESSALAARGDYWPPPPT--NTPSSRTSSSGYQVGPSVSNSQDLAISLP 178
             T T  L  S ++SAL ARG  +  P    +   +R++S   +V  + S   +      
Sbjct: 543 DPTKTTVLVPSGDNSALTARGKLYGKPQNWKDNRENRSTSQNPRVFQTASKPGNKTGENV 602

Query: 179 PFPKAQLEQLYRLLTPPVESTP-----SSSFVAQRGIFSAALT-SQQHSDQWILDSGATD 238
              K QLEQLY+LLTP V +       ++SF+AQ+  F  AL+ + +  D WI+DS A++
Sbjct: 603 SLNKDQLEQLYKLLTPSVATVSPPLGLNTSFLAQKCTFRTALSNTTEKLDPWIIDSSASN 662

Query: 239 HMTVFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSIILSPNITLHSVLHVPKLCCNLIS 298
           HMT +   F+ Y+ +     VK ADGS   +   G+I+L+P+ITL+ VLHVPKL CNL+S
Sbjct: 663 HMTGYASSFSTYNLDSRHIMVKFADGSLTTVARTGTIVLNPHITLYDVLHVPKLACNLLS 722

Query: 299 VQKLTHDLKCQALFTDSKCLFQDLITGMTIGNADGFEGLYYFRGPSLRNKQVLQGETEPI 358
           + KLT DL C   F  S C FQ++ +G  IG+A    GLYYF   +  NKQ         
Sbjct: 723 ISKLTKDLDCSVQFLPSHCEFQEVTSGNRIGSAKELGGLYYFEDDNFENKQAF------T 782

Query: 359 TSSLDGNFWEIDDLNTRIESPQSKIPEIDGLNIESPQPKIPILIVPITQIEESV---PII 418
            SS+  N           +   SK+ +        P    P  IV  +Q++ +    P++
Sbjct: 783 ASSIAPN-----------QPAASKLSQFQSTVAAEPSQLQPTAIVEPSQLQSTTTIEPVV 842

Query: 419 SCNNEDDQVNPNRSDK-QPETLVYS--RRPTVQRGVEPPQPQQQSHESISSLGTEQSTLV 478
                D  + P  + + Q E  VYS   RP         QP Q+             T++
Sbjct: 843 P--TTDYNIRPGGAQQHQQELRVYSWHIRPRDVESTMVFQPYQEL----------DPTIL 902

Query: 479 PQDNTNDLDLPIALRKGDEI----KPNDGHETLNAYEERYVYMIEI 507
           P+   NDL+LPI +RKG  +     P + +E LN  E +   + E+
Sbjct: 903 PE--VNDLNLPIVVRKGTRLAKTETPKNIYEALNKSEWKKAILEEM 917

[Close]

BLAST of Moc02g17080 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-09
Identity = 48/149 (32.21%), Postives = 72/149 (48.32%), Query Frame = 0


Query: 185 QLYRLLTPPVESTPSSSFVAQRGIFSAALTSQQHSDQWILDSGATDHMTVFHDMFTMYSP 244
           QL   L+      P S F   +   + AL S   S+ W+LDSGAT H+T   +  +++ P
Sbjct: 294 QLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQP 353

Query: 245 NPIQTHVKLADGSSAIIKGFGSIILSPN---ITLHSVLHVPKLCCNLISVQKLTHDLKCQ 304
                 V +ADGS+  I   GS  LS     + LH++L+VP +  NLISV +L +     
Sbjct: 354 YTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVS 413

Query: 305 ALFTDSKCLFQDLITGMTIGNADGFEGLY 331
             F  +    +DL TG+ +      + LY
Sbjct: 414 VEFFPASFQVKDLNTGVPLLQGKTKDELY 442

[Close]

BLAST of Moc02g17080 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.9e-07
Identity = 54/196 (27.55%), Postives = 90/196 (45.92%), Query Frame = 0


Query: 138 RGDYWPPPPTNTPSSRTSSSGYQVGPSVSNSQDLAISLPPFPKAQLEQLYRLLTPPVEST 197
           R + W P      SS + S   Q  P +   Q    S+      +  QL++  +   +  
Sbjct: 233 RSNSWQP-----SSSGSRSDNRQPKPYLGRCQ--ICSVQGHSAKRCPQLHQFQSTTNQQQ 292

Query: 198 PSSSFVAQRGIFSAALTSQQHSDQWILDSGATDHMTVFHDMFTMYSPNPIQTHVKLADGS 257
            +S F   +   + A+ S  +++ W+LDSGAT H+T   +  + + P      V +ADGS
Sbjct: 293 STSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGS 352

Query: 258 SAIIKGFGSIIL---SPNITLHSVLHVPKLCCNLISVQKLTHDLKCQALFTDSKCLFQDL 317
           +  I   GS  L   S ++ L+ VL+VP +  NLISV +L +  +    F  +    +DL
Sbjct: 353 TIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDL 412

Query: 318 ITGMTIGNADGFEGLY 331
            TG+ +      + LY
Sbjct: 413 NTGVPLLQGKTKDELY 421

[Close]

BLAST of Moc02g17080 vs. ExPASy TrEMBL
Match: A0A6J1DY12 (uncharacterized protein LOC111025577 OS=Momordica charantia OX=3673 GN=LOC111025577 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 2.6e-145
Identity = 287/382 (75.13%), Postives = 295/382 (77.23%), Query Frame = 0


Query: 1   MVMAWLINSMEEDIKEFFIFCSTAKDLWNALTMAFSDFDNSAQLLNY-----AIRHVPYD 60
           MVMAWLINSMEEDIKE FIF STAKDLWNALTMAFSDFDNSAQL        ++R    D
Sbjct: 99  MVMAWLINSMEEDIKESFIFYSTAKDLWNALTMAFSDFDNSAQLFELHNKARSLRQGESD 158

Query: 61  -----------------------KNSKDAERFHKHVEKERIYDFLAGLRPELDDVRGRLL 120
                                  +NSKDAERF KHVEKERIYDFLAGLRPELDDVRGRLL
Sbjct: 159 VTQYYSSLRRLWAELDLCLNLEWENSKDAERFRKHVEKERIYDFLAGLRPELDDVRGRLL 218

Query: 121 ATKPISAIDEIFAEVRWESSRKRVMMGDTHTKPLSLSLESSALAARGDYWPPPPTNTPSS 180
           ATKPI AIDEIFAEV WESSRKRVMMGDTHTKPLSLSLESSALAARG    PPP+  P  
Sbjct: 219 ATKPIPAIDEIFAEVSWESSRKRVMMGDTHTKPLSLSLESSALAARG----PPPSKQPI- 278

Query: 181 RTSSSGYQVGPSVSNSQDLAISLPPFPKAQLEQLYRLLTPPVESTPSSSFVAQRGIFSAA 240
                                       AQLEQLYRLLT PVESTPSSSFVAQRGI SAA
Sbjct: 279 ----------------------------AQLEQLYRLLTLPVESTPSSSFVAQRGISSAA 338

Query: 241 LTSQQHSDQWILDSGATDHMTVFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSIILSPN 300
           LT QQHSDQWILDSGATDHMT FHDMFTMYSPNPIQTHVKLADGSSAIIKGFGS+ILSPN
Sbjct: 339 LTRQQHSDQWILDSGATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPN 398

Query: 301 ITLHSVLHVPKLCCNLISVQKLTHDLKCQALFTDSKCLFQDLITGMTIGNADGFEGLYYF 355
           ITLHSVL VPKLCCNLISVQKLTHDLKCQALFTDSKCLFQDLITG TIG+ADGFEGLYYF
Sbjct: 399 ITLHSVLXVPKLCCNLISVQKLTHDLKCQALFTDSKCLFQDLITGTTIGSADGFEGLYYF 447

[Close]

BLAST of Moc02g17080 vs. ExPASy TrEMBL
Match: A0A438IPH4 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3236 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.1e-56
Identity = 156/418 (37.32%), Postives = 215/418 (51.44%), Query Frame = 0


Query: 1   MVMAWLINSMEEDIKEFFIFCSTAKDLWNALTMAFSDFDNSAQLLN---------YAIRH 60
           +V+AWLINSME  I +  +F  TAKD+W A+   +SD +NS+Q+ +            R 
Sbjct: 97  LVIAWLINSMEPAIGKPHLFLPTAKDVWEAVRDMYSDLENSSQIFDLKSKLWQSRQGDRE 156

Query: 61  VPYDKNS-------------------KDAERFHKHVEKERIYDFLAGLRPELDDVRGRLL 120
           V    N                     D+ R  K  E +R+Y FLAGL   LD+VRGR+L
Sbjct: 157 VTTYYNQMVTLWQELDLCYEDEWDCPNDSVRHKKREENDRVYVFLAGLNHNLDEVRGRIL 216

Query: 121 ATKPISAIDEIFAEVRWESSRKRVMMGDTHTKPLSLSLESSALAARG------------- 180
             KP+ +I E+F+EVR E +R++VM+ D   K  +  +ESSAL ++G             
Sbjct: 217 GRKPLPSIREVFSEVRREEARRKVMLTDPEPKS-NPEIESSALVSKGSDSDGDRRKKPWC 276

Query: 181 DYWPPP-------------PTNTPSSRTSSS-GYQVGPSVSNSQDLAISLPPFPKAQLEQ 240
           D+   P             P N      S    +Q   + S    +    P F K QL  
Sbjct: 277 DHCKKPWHTKETCWKIHGKPQNFKKKNGSDGRAFQTMSADSQGPQINSEKPNFTKEQLSH 336

Query: 241 LYRLLTPPVESTPSSSFVAQRGIFSAALTSQQHSDQ--WILDSGATDHMTVFHDMFTMYS 300
           LY+L   P  S PS S   Q     AAL+S + +    WI+DSGATDHMT    +F+ Y 
Sbjct: 337 LYKLFQSPQFSNPSCSLAQQGNYLIAALSSIKSNVHCPWIIDSGATDHMTGSSQIFSSYK 396

Query: 301 PNPIQTHVKLADGSSAIIKGFGSIILSPNITLHSVLHVPKLCCNLISVQKLTHDLKCQAL 358
           P      +K+ADGS + I G GS+ +SP++TLH+VLHVP L CNL+S+ K+T D +CQA 
Sbjct: 397 PCAGNKKIKIADGSLSAIAGKGSVFISPSLTLHNVLHVPNLSCNLLSISKITQDHQCQAN 456

[Close]

BLAST of Moc02g17080 vs. ExPASy TrEMBL
Match: A0A438DT81 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_1779 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.4e-55
Identity = 167/466 (35.84%), Postives = 240/466 (51.50%), Query Frame = 0


Query: 59  KDAERFHKHVEKERIYDFLAGLRPELDDVRGRLLATKPISAIDEIFAEVRWESSRKRVMM 118
           KD +RF   + KERIYDFLAGL  +LD VR R+LA K +  I+E+FAEVR E + KRVM+
Sbjct: 483 KDCKRFKARINKERIYDFLAGLNQDLDVVRSRILAIKSLPEIEEVFAEVRREETHKRVML 542

Query: 119 GDTHTKPLSLSLESSALAARGDYWPPPPT--NTPSSRTSSSGYQVGPSVSNSQDLAISLP 178
             T T  L  S ++SAL ARG  +  P    +   +R++S   +V  + S   +      
Sbjct: 543 DPTKTTVLVPSGDNSALTARGKLYGKPQNWKDNRENRSTSQNPRVFQTASKPGNKTGENV 602

Query: 179 PFPKAQLEQLYRLLTPPVESTP-----SSSFVAQRGIFSAALT-SQQHSDQWILDSGATD 238
              K QLEQLY+LLTP V +       ++SF+AQ+  F  AL+ + +  D WI+DS A++
Sbjct: 603 SLNKDQLEQLYKLLTPSVATVSPPLGLNTSFLAQKCTFRTALSNTTEKLDPWIIDSSASN 662

Query: 239 HMTVFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSIILSPNITLHSVLHVPKLCCNLIS 298
           HMT +   F+ Y+ +     VK ADGS   +   G+I+L+P+ITL+ VLHVPKL CNL+S
Sbjct: 663 HMTGYASSFSTYNLDSRHIMVKFADGSLTTVARTGTIVLNPHITLYDVLHVPKLACNLLS 722

Query: 299 VQKLTHDLKCQALFTDSKCLFQDLITGMTIGNADGFEGLYYFRGPSLRNKQVLQGETEPI 358
           + KLT DL C   F  S C FQ++ +G  IG+A    GLYYF   +  NKQ         
Sbjct: 723 ISKLTKDLDCSVQFLPSHCEFQEVTSGNRIGSAKELGGLYYFEDDNFENKQAF------T 782

Query: 359 TSSLDGNFWEIDDLNTRIESPQSKIPEIDGLNIESPQPKIPILIVPITQIEESV---PII 418
            SS+  N           +   SK+ +        P    P  IV  +Q++ +    P++
Sbjct: 783 ASSIAPN-----------QPAASKLSQFQSTVAAEPSQLQPTAIVEPSQLQSTTTIEPVV 842

Query: 419 SCNNEDDQVNPNRSDK-QPETLVYS--RRPTVQRGVEPPQPQQQSHESISSLGTEQSTLV 478
                D  + P  + + Q E  VYS   RP         QP Q+             T++
Sbjct: 843 P--TTDYNIRPGGAQQHQQELRVYSWHIRPRDVESTMVFQPYQEL----------DPTIL 902

Query: 479 PQDNTNDLDLPIALRKGDEI----KPNDGHETLNAYEERYVYMIEI 507
           P+   NDL+LPI +RKG  +     P + +E LN  E +   + E+
Sbjct: 903 PE--VNDLNLPIVVRKGTRLAKTETPKNIYEALNKSEWKKAILEEM 917

[Close]

BLAST of Moc02g17080 vs. ExPASy TrEMBL
Match: A0A6A2WU09 (60S ribosomal protein L38 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116971pilonHSYRG00380 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.2e-54
Identity = 153/410 (37.32%), Postives = 206/410 (50.24%), Query Frame = 0


Query: 1   MVMAWLINSMEEDIKEFFIFCSTAKDLWNALTMAFSDFDNSAQLLNYAIR---------- 60
           M+M+WLINSM+  +   ++F  TA D+WNA+   +SD  N+ Q      R          
Sbjct: 320 MIMSWLINSMDPSVGRTYLFLPTAHDIWNAVNETYSDLGNAGQWFELKTRLWRLKQGEKT 379

Query: 61  -----------------HVPYDKN-SKDAERFHKHVEKERIYDFLAGLRPELDDVRGRLL 120
                               Y+ + +KD   F K VEKER+++FL GL  ELD+VRGR+L
Sbjct: 380 VTQYYTELKTLWQEVDMFSDYEWSCAKDRALFQKMVEKERVFEFLVGLNKELDEVRGRIL 439

Query: 121 ATKPISAIDEIFAEVRWESSRKRVMMGDTHTKPLSLSLESSALAA---------RGDYWP 180
             +P+ +  E+F+EVR E SR+ VM+G     P     ESSAL +         R D   
Sbjct: 440 GREPLPSTREVFSEVRREESRRTVMLGGHSPNP----TESSALFSGQPPRRNDRRNDRDR 499

Query: 181 P---------------------PPTNTPSSRTSSSG---YQVGPSVSNSQDLAISLPPFP 240
           P                     P  N  ++R S +    +      S     A  L  F 
Sbjct: 500 PICEHCNKPGHTKAKCWKLHGKPAENFSANRNSRNAKGFHASSEDASEEPKPASELSAFS 559

Query: 241 KAQLEQLYRLL-------TPPVESTPSSSFVAQRGIFSAALTSQQHSDQWILDSGATDHM 300
           K QLEQLY+L+       TP   S  +SS +AQ+G +  A  +   S+ WI+DSGATDHM
Sbjct: 560 KEQLEQLYQLMSSHSISNTPNPSSYIASSSLAQKGTYPTAFIAGSKSNPWIIDSGATDHM 619

Query: 301 TVFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSIILSPNITLHSVLHVPKLCCNLISVQ 343
           T    +F+ Y P      VK+ADGS   I G GSII+SP++TL +VLHVPKL CNLISV 
Sbjct: 620 TGNSSIFSSYFPLSGNLKVKIADGSLTSIAGKGSIIISPSLTLLNVLHVPKLSCNLISVN 679

[Close]

BLAST of Moc02g17080 vs. ExPASy TrEMBL
Match: A0A2Z7D6C0 (Beta-galactosidase OS=Dorcoceras hygrometricum OX=472368 GN=F511_36718 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-53
Identity = 147/422 (34.83%), Postives = 213/422 (50.47%), Query Frame = 0


Query: 1   MVMAWLINSMEEDIKEFFIFCSTAKDLWNALTMAFSDFDNSAQLLNYAIR---------- 60
           MV AWLINSME  I   F+F   A+++W+A+   +SD +NS+Q+ +   R          
Sbjct: 1   MVTAWLINSMEPSIGRTFLFLPKAQEVWDAVRETYSDLENSSQIFDLKTRLWQSRQGEKT 60

Query: 61  ---------------HVPYDKN---SKDAERFHKHVEKERIYDFLAGLRPELDDVRGRLL 120
                           + YD       D+ ++HK +E +R+Y FLAGL  +LD+VRGR+L
Sbjct: 61  VIEYYNEMKGLWQELDLCYDDKWECKHDSLKYHKRMEGDRVYVFLAGLNRDLDEVRGRIL 120

Query: 121 ATKPISAIDEIFAEVRWESSRKRVMMGDTHTKPLSLSLESSALAAR-------------- 180
              P+ ++ E+FAEVR E  R+++M+    +  LS + E+SA+ ++              
Sbjct: 121 GRNPLPSLGEVFAEVRREEGRRKIML----SSKLSPTTETSAMVSKHFTPTVANRQPKKA 180

Query: 181 -----------------GDYWPPPPTNTPSSRTSSSG-----YQVGPSVSNSQDLAISLP 240
                             D    PP   P S     G     YQ G     + + +  + 
Sbjct: 181 AVVCEHCQKPWHTADTCWDLHGKPPNWKPKSARQKGGSGSRAYQSGLDEHINTEKSSGIA 240

Query: 241 PFPKAQLEQLYRLL--TPPVESTPSSSFVAQRGIFSAAL---TSQQHSDQWILDSGATDH 300
            F K Q++QLY+L   T    S P S  +A +G +  ++    S      WI+DSGATDH
Sbjct: 241 SFSKEQIDQLYKLFQSTSFSPSVPGSCSIATKGTYLQSVGFNVSTITICPWIIDSGATDH 300

Query: 301 MTVFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSIILSPNITLHSVLHVPKLCCNLISV 354
           MT    +F  Y P      +K+ADG+ + I G G+I++S  ITLH+VLHVP L CNL+S+
Sbjct: 301 MTGSSKLFHSYIPCAGNQKIKIADGTLSAIAGQGTIVISQTITLHNVLHVPNLSCNLLSI 360

The following BLAST results are available for this feature:

BLAST of Moc02g17080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159153.1	5.4e-145	75.13	uncharacterized protein LOC111025577 [Momordica charantia]	[more]
RVW98618.1	1.1e-55	37.32	Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]	[more]
XP_024044152.1	1.2e-54	38.38	uncharacterized protein LOC18046468 isoform X2 [Citrus clementina]	[more]
XP_024044151.1	1.2e-54	38.38	uncharacterized protein LOC18046468 isoform X1 [Citrus clementina]	[more]
RVW38706.1	1.5e-54	35.84	Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]	[more]

BLAST of Moc02g17080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	2.0e-09	32.21	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.9e-07	27.55	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]

BLAST of Moc02g17080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DY12	2.6e-145	75.13	uncharacterized protein LOC111025577 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A438IPH4	5.1e-56	37.32	Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976...	[more]
A0A438DT81	7.4e-55	35.84	Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976...	[more]
A0A6A2WU09	6.2e-54	37.32	60S ribosomal protein L38 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116971pil...	[more]
A0A2Z7D6C0	1.1e-53	34.83	Beta-galactosidase OS=Dorcoceras hygrometricum OX=472368 GN=F511_36718 PE=4 SV=1	[more]

BLAST of Moc02g17080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 440..469
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 432..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..163
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 56..125
None	No IPR available	PANTHER	PTHR34222:SF37	SUBFAMILY NOT NAMED	coord: 56..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g17080.1	Moc02g17080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0016787	hydrolase activity