Moc02g16930 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g16930
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr2: 12712415 .. 12713595 (-)
RNA-Seq Expression	Moc02g16930
Synteny	Moc02g16930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGGGAAAAGGGAGACCTGTTCCTCTCACGGAAAGATAAAATATGATCGATCTGACAGAGATGATAGAGATGAGTCACGTTCATCGAAGAAGATAGAACCTAACGAAAAAAGACCTACAGTTACAAACACCATCTTTGGTGGGCCTAGTAGAGGACAATCGAGTAACAAGAGAAAAGCCCTGATTTATGAGTCGCAACAAGAAGTTAACACCTCTTAAATCTGACTAGCAGCTGCCATAACCTTCACCATGAAGGATTATAGAGGGATCCATTTGCCACAAAACGACGTTCTGGTTATTTCCTCACTGATTGATAATGTACGCGTCAAGAGGGTTTTGATTGACGGAAGAGCCTCTACCAATATACTGCCTCTTTCAACCTATTTAGCTTTAGGTTGGGAGAGATCGCAATCAAAGAAATGCCCAACACCGCTAGTTGGATTTTCAGGTTAATTGGTGGCAGCGGACGGGTGTGCCGAGCTCCCCGTTATCATTGGTGAAGGAGAAAATGAAGTTCGGAAAGTTGTCGAGTTTGTTGTAGTTGACGGAGCTTCAGCCTATAAAGTTATTCTCGTAAGGCTTACATCCATGACCTACAGGTAGTTTTGTCTACTTACCATCAAATGATGAAGTAGCCCACTAAAAACGGAGTACTGCCTGACTCGACTGGTGAGAGTTCCAACAAGTGGGTTTTCAATGTCCATGGTTCCTCCAATGAGAAAGGTAGTGGGGCCAGAGTCCTCCTTCAGGCGCCCAGCAGAGATCTGTTTGAATACGTAGTAAGATTCTTTCCAGCCTTGAACAATGAGGCCGAGTCTGAAGCACTGGTGGCAGGCTTACGTATGATTGAGGCCATGAGAGCCGTGCACTTGGACATAAGAAGCGACTCGCAGCTCGTGGTCAGCCAGATTACCGAGGAATACCAAGCCAAGGATAGCAGGATGAAGAAGTACTTATACAAGGTGCGCAAGTTGTTGTCTAGGTTCCAGGGGTACACTATAGAGCGAGTACCGCGTGCGGAAAACGCCAATGCAGATGTCTTGGCAAGGCTGACATCCTCTTACTCGACCAAGCTGTCCAAGTCGGTCCAAGTCGAAATTTTAGAGACTATTTTTGTCCACGAGCTGGAAGCAATGAACATCGACACCACGACTCCGACCTGGATGGATCACATCTAA

mRNA sequence

ATGTGGGGGAAAAGGGAGACCTGTTCCTCTCACGGAAAGATAAAATATGATCGATCTGACAGAGATGATAGAGATGAGTCACGTTCATCGAAGAAGATAGAACCTAACGAAAAAAGACCTACAGTTACAAACACCATCTTTGCTGCCATAACCTTCACCATGAAGGATTATAGAGGGATCCATTTGCCACAAAACGACGTTCTGGTTATTTCCTCACTGATTGATAATGTACGCGTCAAGAGGGTTTTGATTGACGGAAGAGCCTCTACCAATATACTGCCTCTTTCAACCTATTTAGCTTTAGGTAGTGGGGCCAGAGTCCTCCTTCAGGCGCCCAGCAGAGATCTGTTTGAATACGTAGTAAGATTCTTTCCAGCCTTGAACAATGAGGCCGAGTCTGAAGCACTGGTGGCAGGCTTACGTATGATTGAGGCCATGAGAGCCGTGCACTTGGACATAAGAAGCGACTCGCAGCTCGTGGTCAGCCAGATTACCGAGGAATACCAAGCCAAGGATAGCAGGATGAAGAAGTACTTATACAAGGTGCGCAAGTTGTTGTCTAGGTTCCAGGGGTACACTATAGAGCGAGTACCGCGTGCGGAAAACGCCAATGCAGATGTCTTGGCAAGGCTGACATCCTCTTACTCGACCAAGCTGTCCAAGTCGGTCCAAGTCGAAATTTTAGAGACTATTTTTGTCCACGAGCTGGAAGCAATGAACATCGACACCACGACTCCGACCTGGATGGATCACATCTAA

Coding sequence (CDS)

ATGTGGGGGAAAAGGGAGACCTGTTCCTCTCACGGAAAGATAAAATATGATCGATCTGACAGAGATGATAGAGATGAGTCACGTTCATCGAAGAAGATAGAACCTAACGAAAAAAGACCTACAGTTACAAACACCATCTTTGCTGCCATAACCTTCACCATGAAGGATTATAGAGGGATCCATTTGCCACAAAACGACGTTCTGGTTATTTCCTCACTGATTGATAATGTACGCGTCAAGAGGGTTTTGATTGACGGAAGAGCCTCTACCAATATACTGCCTCTTTCAACCTATTTAGCTTTAGGTAGTGGGGCCAGAGTCCTCCTTCAGGCGCCCAGCAGAGATCTGTTTGAATACGTAGTAAGATTCTTTCCAGCCTTGAACAATGAGGCCGAGTCTGAAGCACTGGTGGCAGGCTTACGTATGATTGAGGCCATGAGAGCCGTGCACTTGGACATAAGAAGCGACTCGCAGCTCGTGGTCAGCCAGATTACCGAGGAATACCAAGCCAAGGATAGCAGGATGAAGAAGTACTTATACAAGGTGCGCAAGTTGTTGTCTAGGTTCCAGGGGTACACTATAGAGCGAGTACCGCGTGCGGAAAACGCCAATGCAGATGTCTTGGCAAGGCTGACATCCTCTTACTCGACCAAGCTGTCCAAGTCGGTCCAAGTCGAAATTTTAGAGACTATTTTTGTCCACGAGCTGGAAGCAATGAACATCGACACCACGACTCCGACCTGGATGGATCACATCTAA

Protein sequence

MWGKRETCSSHGKIKYDRSDRDDRDESRSSKKIEPNEKRPTVTNTIFAAITFTMKDYRGIHLPQNDVLVISSLIDNVRVKRVLIDGRASTNILPLSTYLALGSGARVLLQAPSRDLFEYVVRFFPALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLVVSQITEEYQAKDSRMKKYLYKVRKLLSRFQGYTIERVPRAENANADVLARLTSSYSTKLSKSVQVEILETIFVHELEAMNIDTTTPTWMDHI

Homology

[Close]

BLAST of Moc02g16930 vs. NCBI nr
Match: XP_022150862.1 (uncharacterized protein LOC111018909 [Momordica charantia])

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-40
Identity = 113/261 (43.30%), Postives = 151/261 (57.85%), Query Frame = 0


Query: 37  EKRPTVTNTIFAAITFTMKDYRGIHLPQNDVLVISSLIDNVRVKRVLID-GRASTNILPL 96
           E++PT       +ITF   D  G+HLP ND LVI+ LID++ V+RVL+D GR     L L
Sbjct: 44  EQKPT------CSITFGDVDLDGVHLPHNDALVIAPLIDHILVRRVLVDGGRLMKWALEL 103

Query: 97  STY-------------------------------------------LALGSGARVLLQAP 156
           S Y                                              G GA +LL AP
Sbjct: 104 SEYDIQFEPRTAIKGQAVADFMVELTPPPQLVKSDLPWTIFVDGSSNERGCGAGILLLAP 163

Query: 157 SRDLFEYVVRF-FPALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLVVSQITEEYQAK 216
             + FEY +RF F   NN+A  EAL+AGLR+ + + A H+ + SDSQL+V+QI EEYQAK
Sbjct: 164 GGERFEYALRFNFRTSNNKAGYEALLAGLRVAKGLGASHIKVFSDSQLIVNQIKEEYQAK 223

Query: 217 DSRMKKYLYKVRKLLSRFQGYTIERVPRAENANADVLARLTSSYSTKLSKSVQVEILETI 253
           D RM+KYL KVR  L++F  Y + +VPR+EN+NADVLA+L S+Y T L++SV V IL+T 
Sbjct: 224 DPRMEKYLSKVRSHLAQFGTYEVSQVPRSENSNADVLAKLASAYETDLARSVPVGILDTP 283

[Close]

BLAST of Moc02g16930 vs. NCBI nr
Match: XP_022158589.1 (uncharacterized protein LOC111025045 [Momordica charantia])

HSP 1 Score: 156.4 bits (394), Expect = 3.3e-34
Identity = 81/152 (53.29%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 102 GSGARVLLQAPSRDLFEYVVRF-FPALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLV 161
           G GA++LL AP  + FEY +RF F   NNEAE EAL+AGLR+ + + A+H+ + +DSQLV
Sbjct: 292 GCGAKILLLAPGGERFEYALRFNFRTSNNEAEYEALLAGLRVAKELGAIHIKVFNDSQLV 351

Query: 162 VSQITEEYQAKDSRMKKYLYKVRKLLSRFQGYTIERVPRAENANADVLARLTSSYSTKLS 221
           V+QI EEYQ KD RM+KYL KVR  L++F+ Y + +VPR+EN+NA  LA+L S+Y T L+
Sbjct: 352 VNQIKEEYQTKDPRMEKYLSKVRSHLAQFETYEVNQVPRSENSNAGALAKLASAYETYLA 411

Query: 222 KSVQVEILETIFVHELEAMNIDTTTPTWMDHI 253
           +SV VEIL+   + E + M +DT  P+WMD I
Sbjct: 412 RSVSVEILDNPSILEPDVMEVDTPAPSWMDPI 443

[Close]

BLAST of Moc02g16930 vs. NCBI nr
Match: XP_022150038.1 (uncharacterized protein K02A2.6-like [Momordica charantia])

HSP 1 Score: 156.4 bits (394), Expect = 3.3e-34
Identity = 83/152 (54.61%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 102 GSGARVLLQAPSRDLFEYVVRF-FPALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLV 161
           G GA +LL AP  + FEY +RF F   NNEAE EAL+AGLR+ + + A H+ + SDSQL+
Sbjct: 53  GCGAGILLLAPGGERFEYALRFNFRTSNNEAEYEALLAGLRVAKGLGASHIKVFSDSQLI 112

Query: 162 VSQITEEYQAKDSRMKKYLYKVRKLLSRFQGYTIERVPRAENANADVLARLTSSYSTKLS 221
           V+QI EEYQAKD RM+KYL KVR  L++F+ Y + +VPR+ N+NAD LA+L S Y T L+
Sbjct: 113 VNQIKEEYQAKDPRMEKYLGKVRSHLAQFRTYEVSQVPRSXNSNADALAKLASXYETDLA 172

Query: 222 KSVQVEILETIFVHELEAMNIDTTTPTWMDHI 253
           +SV VEIL+T  + E +   +DT +PTWMD I
Sbjct: 173 RSVPVEILDTPSILEXDVXXVDTPSPTWMDPI 204

[Close]

BLAST of Moc02g16930 vs. NCBI nr
Match: XP_022158860.1 (uncharacterized protein LOC111025322 [Momordica charantia])

HSP 1 Score: 156.4 bits (394), Expect = 3.3e-34
Identity = 85/152 (55.92%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 102 GSGARVLLQAPSRDLFEYVVRF-FPALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLV 161
           G GA +LL AP  + FEY +RF F   NNEAE EAL+ GLR+  A+ A H+ + SDSQLV
Sbjct: 112 GCGAGILLLAPGSERFEYALRFSFRTSNNEAEYEALLTGLRIARALGASHIKVFSDSQLV 171

Query: 162 VSQITEEYQAKDSRMKKYLYKVRKLLSRFQGYTIERVPRAENANADVLARLTSSYSTKLS 221
           VSQI EEYQAKDSRM+KYL KVR  L +F+ Y + +VPRAEN+NA+ LA+L  +Y T L+
Sbjct: 172 VSQIKEEYQAKDSRMEKYLSKVRSYLIQFRTYEVSQVPRAENSNANALAKLALAYETDLA 231

Query: 222 KSVQVEILETIFVHELEAMNIDTTTPTWMDHI 253
           +SV VEIL+   + E + M +DT  P+WMD I
Sbjct: 232 RSVPVEILDGPSILEPDLMEVDTPEPSWMDPI 263

[Close]

BLAST of Moc02g16930 vs. NCBI nr
Match: XP_022150100.1 (uncharacterized protein LOC111018362 [Momordica charantia])

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-33
Identity = 83/152 (54.61%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 102 GSGARVLLQAPSRDLFEYVVRF-FPALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLV 161
           G GA +LL APS + FEY +RF F   NNEAE EAL+A L +   + AVH+ + SDSQLV
Sbjct: 303 GCGAGILLLAPSGERFEYALRFNFRTSNNEAEYEALLACLCVARGLGAVHIKVFSDSQLV 362

Query: 162 VSQITEEYQAKDSRMKKYLYKVRKLLSRFQGYTIERVPRAENANADVLARLTSSYSTKLS 221
           V+QI EEYQ KD RM+KYL KVR  L++F+ Y + +VPR+EN+NAD LA+L S+Y T L+
Sbjct: 363 VNQIKEEYQTKDPRMEKYLSKVRSHLAQFRTYEVSQVPRSENSNADALAKLASAYETDLA 422

Query: 222 KSVQVEILETIFVHELEAMNIDTTTPTWMDHI 253
           +SV VEIL++  + E + M +DT +P+WMD I
Sbjct: 423 RSVPVEILDSPSILEPDVMEVDTPSPSWMDPI 454

[Close]

BLAST of Moc02g16930 vs. ExPASy Swiss-Prot
Match: Q9HSF6 (Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=rnhA PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-07
Identity = 32/84 (38.10%), Postives = 48/84 (57.14%), Query Frame = 0


Query: 126 ALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLVVSQITEEYQAKDSRMKKYLYKVRKL 185
           A NN+AE +AL+A L          +++R DSQLV  Q+T  +   D  +++   + R+L
Sbjct: 109 ATNNQAEYDALIAALEAAADFGFDDIELRGDSQLVEKQLTGAWDTNDPDLRRKRVRAREL 168

Query: 186 LSRFQGYTIERVPRAENANADVLA 210
           L+ F  ++I  VPRA N  AD LA
Sbjct: 169 LTGFDDWSITHVPRATNERADALA 192

[Close]

BLAST of Moc02g16930 vs. ExPASy TrEMBL
Match: A0A6J1DBX4 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018909 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 5.1e-41
Identity = 113/261 (43.30%), Postives = 151/261 (57.85%), Query Frame = 0


Query: 37  EKRPTVTNTIFAAITFTMKDYRGIHLPQNDVLVISSLIDNVRVKRVLID-GRASTNILPL 96
           E++PT       +ITF   D  G+HLP ND LVI+ LID++ V+RVL+D GR     L L
Sbjct: 44  EQKPT------CSITFGDVDLDGVHLPHNDALVIAPLIDHILVRRVLVDGGRLMKWALEL 103

Query: 97  STY-------------------------------------------LALGSGARVLLQAP 156
           S Y                                              G GA +LL AP
Sbjct: 104 SEYDIQFEPRTAIKGQAVADFMVELTPPPQLVKSDLPWTIFVDGSSNERGCGAGILLLAP 163

Query: 157 SRDLFEYVVRF-FPALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLVVSQITEEYQAK 216
             + FEY +RF F   NN+A  EAL+AGLR+ + + A H+ + SDSQL+V+QI EEYQAK
Sbjct: 164 GGERFEYALRFNFRTSNNKAGYEALLAGLRVAKGLGASHIKVFSDSQLIVNQIKEEYQAK 223

Query: 217 DSRMKKYLYKVRKLLSRFQGYTIERVPRAENANADVLARLTSSYSTKLSKSVQVEILETI 253
           D RM+KYL KVR  L++F  Y + +VPR+EN+NADVLA+L S+Y T L++SV V IL+T 
Sbjct: 224 DPRMEKYLSKVRSHLAQFGTYEVSQVPRSENSNADVLAKLASAYETDLARSVPVGILDTP 283

[Close]

BLAST of Moc02g16930 vs. ExPASy TrEMBL
Match: A0A6J1D8D8 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018311 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-34
Identity = 83/152 (54.61%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 102 GSGARVLLQAPSRDLFEYVVRF-FPALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLV 161
           G GA +LL AP  + FEY +RF F   NNEAE EAL+AGLR+ + + A H+ + SDSQL+
Sbjct: 53  GCGAGILLLAPGGERFEYALRFNFRTSNNEAEYEALLAGLRVAKGLGASHIKVFSDSQLI 112

Query: 162 VSQITEEYQAKDSRMKKYLYKVRKLLSRFQGYTIERVPRAENANADVLARLTSSYSTKLS 221
           V+QI EEYQAKD RM+KYL KVR  L++F+ Y + +VPR+ N+NAD LA+L S Y T L+
Sbjct: 113 VNQIKEEYQAKDPRMEKYLGKVRSHLAQFRTYEVSQVPRSXNSNADALAKLASXYETDLA 172

Query: 222 KSVQVEILETIFVHELEAMNIDTTTPTWMDHI 253
           +SV VEIL+T  + E +   +DT +PTWMD I
Sbjct: 173 RSVPVEILDTPSILEXDVXXVDTPSPTWMDPI 204

[Close]

BLAST of Moc02g16930 vs. ExPASy TrEMBL
Match: A0A6J1DX12 (uncharacterized protein LOC111025322 OS=Momordica charantia OX=3673 GN=LOC111025322 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-34
Identity = 85/152 (55.92%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 102 GSGARVLLQAPSRDLFEYVVRF-FPALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLV 161
           G GA +LL AP  + FEY +RF F   NNEAE EAL+ GLR+  A+ A H+ + SDSQLV
Sbjct: 112 GCGAGILLLAPGSERFEYALRFSFRTSNNEAEYEALLTGLRIARALGASHIKVFSDSQLV 171

Query: 162 VSQITEEYQAKDSRMKKYLYKVRKLLSRFQGYTIERVPRAENANADVLARLTSSYSTKLS 221
           VSQI EEYQAKDSRM+KYL KVR  L +F+ Y + +VPRAEN+NA+ LA+L  +Y T L+
Sbjct: 172 VSQIKEEYQAKDSRMEKYLSKVRSYLIQFRTYEVSQVPRAENSNANALAKLALAYETDLA 231

Query: 222 KSVQVEILETIFVHELEAMNIDTTTPTWMDHI 253
           +SV VEIL+   + E + M +DT  P+WMD I
Sbjct: 232 RSVPVEILDGPSILEPDLMEVDTPEPSWMDPI 263

[Close]

BLAST of Moc02g16930 vs. ExPASy TrEMBL
Match: A0A6J1DZV0 (uncharacterized protein LOC111025045 OS=Momordica charantia OX=3673 GN=LOC111025045 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-34
Identity = 81/152 (53.29%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 102 GSGARVLLQAPSRDLFEYVVRF-FPALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLV 161
           G GA++LL AP  + FEY +RF F   NNEAE EAL+AGLR+ + + A+H+ + +DSQLV
Sbjct: 292 GCGAKILLLAPGGERFEYALRFNFRTSNNEAEYEALLAGLRVAKELGAIHIKVFNDSQLV 351

Query: 162 VSQITEEYQAKDSRMKKYLYKVRKLLSRFQGYTIERVPRAENANADVLARLTSSYSTKLS 221
           V+QI EEYQ KD RM+KYL KVR  L++F+ Y + +VPR+EN+NA  LA+L S+Y T L+
Sbjct: 352 VNQIKEEYQTKDPRMEKYLSKVRSHLAQFETYEVNQVPRSENSNAGALAKLASAYETYLA 411

Query: 222 KSVQVEILETIFVHELEAMNIDTTTPTWMDHI 253
           +SV VEIL+   + E + M +DT  P+WMD I
Sbjct: 412 RSVSVEILDNPSILEPDVMEVDTPAPSWMDPI 443

[Close]

BLAST of Moc02g16930 vs. ExPASy TrEMBL
Match: A0A6J1D7J6 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018362 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.1e-34
Identity = 83/152 (54.61%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 102 GSGARVLLQAPSRDLFEYVVRF-FPALNNEAESEALVAGLRMIEAMRAVHLDIRSDSQLV 161
           G GA +LL APS + FEY +RF F   NNEAE EAL+A L +   + AVH+ + SDSQLV
Sbjct: 303 GCGAGILLLAPSGERFEYALRFNFRTSNNEAEYEALLACLCVARGLGAVHIKVFSDSQLV 362

Query: 162 VSQITEEYQAKDSRMKKYLYKVRKLLSRFQGYTIERVPRAENANADVLARLTSSYSTKLS 221
           V+QI EEYQ KD RM+KYL KVR  L++F+ Y + +VPR+EN+NAD LA+L S+Y T L+
Sbjct: 363 VNQIKEEYQTKDPRMEKYLSKVRSHLAQFRTYEVSQVPRSENSNADALAKLASAYETDLA 422

Query: 222 KSVQVEILETIFVHELEAMNIDTTTPTWMDHI 253
           +SV VEIL++  + E + M +DT +P+WMD I
Sbjct: 423 RSVPVEILDSPSILEPDVMEVDTPSPSWMDPI 454

The following BLAST results are available for this feature:

BLAST of Moc02g16930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150862.1	1.1e-40	43.30	uncharacterized protein LOC111018909 [Momordica charantia]	[more]
XP_022158589.1	3.3e-34	53.29	uncharacterized protein LOC111025045 [Momordica charantia]	[more]
XP_022150038.1	3.3e-34	54.61	uncharacterized protein K02A2.6-like [Momordica charantia]	[more]
XP_022158860.1	3.3e-34	55.92	uncharacterized protein LOC111025322 [Momordica charantia]	[more]
XP_022150100.1	1.3e-33	54.61	uncharacterized protein LOC111018362 [Momordica charantia]	[more]

BLAST of Moc02g16930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9HSF6	1.2e-07	38.10	Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC...	[more]

BLAST of Moc02g16930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBX4	5.1e-41	43.30	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018909 PE=4 SV=1	[more]
A0A6J1D8D8	1.6e-34	54.61	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018311 PE=4 SV=1	[more]
A0A6J1DX12	1.6e-34	55.92	uncharacterized protein LOC111025322 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DZV0	1.6e-34	53.29	uncharacterized protein LOC111025045 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D7J6	6.1e-34	54.61	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018362 PE=4 SV=1	[more]

BLAST of Moc02g16930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 82..228 e-value: 1.7E-24 score: 88.3
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 128..211 e-value: 1.6E-14 score: 53.8
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 94..214 score: 8.794189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR46387:SF6	14.7 KDA RIBONUCLEASE H-LIKE PROTEIN	coord: 92..235
None	No IPR available	PANTHER	PTHR46387	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN	coord: 92..235
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 102..211 e-value: 8.08933E-36 score: 122.196
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 104..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g16930.1	Moc02g16930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity