Moc02g16400 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc02g16400
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNA-directed DNA polymerase
Locationchr2: 12370500 .. 12371948 (+)
RNA-Seq ExpressionMoc02g16400
SyntenyMoc02g16400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAGGACATTCAAGAGCAAGGGATTCATTGGGAAAGAGACACAGCAACCAACTTCAAGATTGATTCAAGATCTCCTCCCTCGTCAAGAATCCCTCCCTCTTCCTCGAAGACATTCTGACGTTCCTCTAACCCTTCACCAAGAAGTCTATCCCAGGGCACCTAGAGATTATCAAGAACATCTTTTTGCTCCCCCACGACACCATTTTGGGCAGCGGGATCATCGTGCTCATCGTCGACATGATCGCTTCCCTCGGCGGCACCAACTTCCCAAGGATTCGTCCAGTGACGAGGAGGACTTGCAGCATTGGGGTGATGGCCGAAGACAGCAACTTTGTAATCAACATCATCATTGAGAGCCAAATGATTACAAGATGAAGGTCGATCTCCCTCATTTTGATGGAAAGTTAGACATTAAGGCTTTCTTGAATGGATCAAGAATGTTGAAAGCTTCTTCGAATATATGTCAACTCGGGATCACAAGAAAGTAGAGTTGGTGGCTCTTAAGATGAAGAGCGGAGCGTCAGCTTGGTGGGAGCAGATGGAAACAAGTCGGCATCGCTTTGGTAAGACCCCTATTCATACTTGGGAGAAGATGAAAAAAACTAATGCGAGCTAGATTTTTACCCATCAATTTTGAGCAAGTCCTCTACAATCAGTACCAAAATTGTAAATAAGGTACTCGTTCGATAGCTGATTATACCGAGGAGTTCCATAGATTGGGGGCACGCACAAATCTTGGTGAATCGGATCAATACCAAGTGGCTCGGTCTGTTAGTGGTCTTCAAGCTGATATTAAAGAAAAACTACAATTACAGCCTATTGGGTATCTAGATGAAGCAATCGCCACGGCCATCACAGTGGAAGAACAACAAGCAAATCGGCTCAAAAACCAATATCAGCGACGGCAATTAGGTGATAACCAAGCCAGTTCTGCAAGAAAAGGAACTTTCTTGGATAAGGCTACTTCGGGTACTATTTCTAACTCAAAGGGCAAGAATCTTGAGGATCAAAAACCTACCGACCAACCCACAAAACGAACTCTCAATGCCTACACTCGACCTACATTGGGAAAGTGATTTCGTTGTGGGCAAATTGGTCATTTATCCAATGAATGCCCCCAGCGTAAAACAGTCAATCTTGTAGAGGATTTTCAAGATCTTGATGATTCTTGTGACCAAGAATCCGATGAAGAAGTCGTCTATCTTGCACCTAATGAAGGCGAACAGGTCTCTTGCGTTTTAGAACGCATTCTCCTAGCTCCTAAGACACAATCTGGCCAGCAGCGGCATTTGTTGTTTCGAACACGATGCACAATAAGTGGGAAGGTCTGTAATGTCATTATCGACAGTGGGAGCACTGAAAATGTTGTTTCCAGTAAGCTGGTTACAACATTAAATCTCAAAGTCTCCTCACCCTACCCCATACAAGGTTATTTGGATTCGTAA

mRNA sequence

ATGGTAAGGACATTCAAGAGCAAGGGATTCATTGGGAAAGAGACACAGCAACCAACTTCAAGATTGATTCAAGATCTCCTCCCTCGTCAAGAATCCCTCCCTCTTCCTCGAAGACATTCTGACGTTCCTCTAACCCTTCACCAAGAAGTCTATCCCAGGGCACCTAGAGATTATCAAGAACATCTTTTTGCTCCCCCACGACACCATTTTGGGCAGCGGGATCATCGTGCTCATCGTCGACATGATCGCTTCCCTCGGCGGCACCAACTTCCCAAGGATTCGTCCAGTGACGAGGAGGACTTGCAGCATTGGGGTGATGGCCGAAGACAGCAACTTTGCTTTCTTGAATGGATCAAGAATGTTGAAAGCTTCTTCGAATATATGTCAACTCGGGATCACAAGAAAGTAGAGTTGGTGGCTCTTAAGATGAAGAGCGGAGCGTCAGCTTGGTGGGAGCAGATGGAAACAAGTCGGCATCGCTTTGGTACTCGTTCGATAGCTGATTATACCGAGGAGTTCCATAGATTGGGGGCACGCACAAATCTTGGTGAATCGGATCAATACCAAGTGGCTCGGTCTGTTAGTGGTCTTCAAGCTGATATTAAAGAAAAACTACAATTACAGCCTATTGGGTATCTAGATGAAGCAATCGCCACGGCCATCACAGTGGAAGAACAACAAGCAAATCGGCTCAAAAACCAATATCAGCGACGGCAATTAGGTGATAACCAAGCCAGTTCTGCAAGAAAAGGAACTTTCTTGGATAAGGCTACTTCGGTCAATCTTGTAGAGGATTTTCAAGATCTTGATGATTCTTGTGACCAAGAATCCGATGAAGAAGTCGTCTATCTTGCACCTAATGAAGGCGAACAGGTCTCTTGCGTTTTAGAACGCATTCTCCTAGCTCCTAAGACACAATCTGGCCAGCAGCGGCATTTGTTGTTTCGAACACGATGCACAATAAGTGGGAAGGTCTGTAATGTCATTATCGACAGTGGGAGCACTGAAAATGTTGTTTCCAGTAAGCTGGTTACAACATTAAATCTCAAAGTCTCCTCACCCTACCCCATACAAGGTTATTTGGATTCGTAA

Coding sequence (CDS)

ATGGTAAGGACATTCAAGAGCAAGGGATTCATTGGGAAAGAGACACAGCAACCAACTTCAAGATTGATTCAAGATCTCCTCCCTCGTCAAGAATCCCTCCCTCTTCCTCGAAGACATTCTGACGTTCCTCTAACCCTTCACCAAGAAGTCTATCCCAGGGCACCTAGAGATTATCAAGAACATCTTTTTGCTCCCCCACGACACCATTTTGGGCAGCGGGATCATCGTGCTCATCGTCGACATGATCGCTTCCCTCGGCGGCACCAACTTCCCAAGGATTCGTCCAGTGACGAGGAGGACTTGCAGCATTGGGGTGATGGCCGAAGACAGCAACTTTGCTTTCTTGAATGGATCAAGAATGTTGAAAGCTTCTTCGAATATATGTCAACTCGGGATCACAAGAAAGTAGAGTTGGTGGCTCTTAAGATGAAGAGCGGAGCGTCAGCTTGGTGGGAGCAGATGGAAACAAGTCGGCATCGCTTTGGTACTCGTTCGATAGCTGATTATACCGAGGAGTTCCATAGATTGGGGGCACGCACAAATCTTGGTGAATCGGATCAATACCAAGTGGCTCGGTCTGTTAGTGGTCTTCAAGCTGATATTAAAGAAAAACTACAATTACAGCCTATTGGGTATCTAGATGAAGCAATCGCCACGGCCATCACAGTGGAAGAACAACAAGCAAATCGGCTCAAAAACCAATATCAGCGACGGCAATTAGGTGATAACCAAGCCAGTTCTGCAAGAAAAGGAACTTTCTTGGATAAGGCTACTTCGGTCAATCTTGTAGAGGATTTTCAAGATCTTGATGATTCTTGTGACCAAGAATCCGATGAAGAAGTCGTCTATCTTGCACCTAATGAAGGCGAACAGGTCTCTTGCGTTTTAGAACGCATTCTCCTAGCTCCTAAGACACAATCTGGCCAGCAGCGGCATTTGTTGTTTCGAACACGATGCACAATAAGTGGGAAGGTCTGTAATGTCATTATCGACAGTGGGAGCACTGAAAATGTTGTTTCCAGTAAGCTGGTTACAACATTAAATCTCAAAGTCTCCTCACCCTACCCCATACAAGGTTATTTGGATTCGTAA

Protein sequence

MVRTFKSKGFIGKETQQPTSRLIQDLLPRQESLPLPRRHSDVPLTLHQEVYPRAPRDYQEHLFAPPRHHFGQRDHRAHRRHDRFPRRHQLPKDSSSDEEDLQHWGDGRRQQLCFLEWIKNVESFFEYMSTRDHKKVELVALKMKSGASAWWEQMETSRHRFGTRSIADYTEEFHRLGARTNLGESDQYQVARSVSGLQADIKEKLQLQPIGYLDEAIATAITVEEQQANRLKNQYQRRQLGDNQASSARKGTFLDKATSVNLVEDFQDLDDSCDQESDEEVVYLAPNEGEQVSCVLERILLAPKTQSGQQRHLLFRTRCTISGKVCNVIIDSGSTENVVSSKLVTTLNLKVSSPYPIQGYLDS
Homology
BLAST of Moc02g16400 vs. NCBI nr
Match: XP_031741035.1 (uncharacterized protein LOC116403692 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 2.1e-50
Identity = 137/345 (39.71%), Postives = 182/345 (52.75%), Query Frame = 0

Query: 106 DGRRQQLCFLEWIKNVESFFEYMSTRDHKKVELVALKMKSGASAWWEQMETSRHRF---- 165
           DG+R    FL+WIK+ E+FF YM T + KKV LVALK+++GASAWW+Q+E +R R     
Sbjct: 180 DGKRNIEAFLDWIKSTENFFNYMDTPERKKVHLVALKLRAGASAWWDQLEINRQRCGKQP 239

Query: 166 ---------------------------------GTRSIADYTEEFHRLGARTNLGESDQY 225
                                            G RS+A+Y EEFHRL ARTNL E++Q+
Sbjct: 240 VRSWEKMKKLLKARFLPPNYEQTLYNQYQNCRQGVRSVAEYIEEFHRLSARTNLSENEQH 299

Query: 226 QVARSVSGLQADIKEKLQLQPIGYLDEAIATAITVEEQQANRLKNQYQRRQLGDN----- 285
           QVAR V GL+ DIKEK++LQP  +L EAI+ A TVEE  A R KN  +R     N     
Sbjct: 300 QVARFVGGLRFDIKEKVRLQPFRFLSEAISFAETVEEMIAIRSKNLNRRSAWETNSTKSK 359

Query: 286 -----QASSARKGTFLDK---ATSVNLVEDFQ----------------------DLDDSC 345
                  S+  KG  +D    A      + F+                       L D+C
Sbjct: 360 TNDQPSTSTKAKGKEIDNQEVAVERKKEQTFKPSGQNSYSRPSLGKCFRCGQTGHLSDNC 419

Query: 346 DQ------------------ESDEEVVYLAPNEGEQVSCVLERILLAPKTQSGQQRHLLF 358
            Q                  E++EE   +  ++GE+VSCV++R+L+ PK +   QRH LF
Sbjct: 420 PQRKTIAIAEEGGQISEDSIEAEEETELIEADDGERVSCVIQRLLITPKEEKNLQRHCLF 479

BLAST of Moc02g16400 vs. NCBI nr
Match: XP_031743026.1 (uncharacterized protein LOC116404533 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 5.2e-49
Identity = 132/344 (38.37%), Postives = 180/344 (52.33%), Query Frame = 0

Query: 107 GRRQQLCFLEWIKNVESFFEYMSTRDHKKVELVALKMKSGASAWWEQMETSRHRF----- 166
           G+R    FL+WIK+ E+FF YM T + KKV LVALK+++GASAWW+Q+E +R R      
Sbjct: 181 GKRNIEAFLDWIKSTENFFTYMDTPERKKVHLVALKLRAGASAWWDQLEINRQRCGKQPV 240

Query: 167 --------------------------------GTRSIADYTEEFHRLGARTNLGESDQYQ 226
                                           G R++A+Y EEFHRL ARTNL E++Q+Q
Sbjct: 241 RSWEKMKKLLKARFLPPNYEQTLYNQYQNCRQGVRTVAEYIEEFHRLSARTNLSENEQHQ 300

Query: 227 VARSVSGLQADIKEKLQLQPIGYLDEAIATAITVEEQQANRLKNQYQRRQLGDN------ 286
           VAR V GL+ DIKEK++LQP  +L EAI+ A TVEE  A R KN  +R     N      
Sbjct: 301 VARFVGGLRFDIKEKVRLQPFRFLSEAISFAETVEEMIAIRSKNLNRRSAWETNSTKSKT 360

Query: 287 ----QASSARKGTFLDK---ATSVNLVEDFQ----------------------DLDDSCD 346
                 S+  KG  +D    A      + F+                       L ++C 
Sbjct: 361 NDQPSTSTKAKGKEIDNQEVAVERKKEQTFKPSGQNNYSRPSLGKCFRCGQTGHLSNNCP 420

Query: 347 Q------------------ESDEEVVYLAPNEGEQVSCVLERILLAPKTQSGQQRHLLFR 361
           Q                  E++EE   +  ++GE+VSCV++R+L+ PK +   QRH LF+
Sbjct: 421 QRKTIAIAEEGGQTSEDSIEAEEETELIEADDGERVSCVIQRLLITPKEEKNLQRHCLFK 480

BLAST of Moc02g16400 vs. NCBI nr
Match: KAA0054966.1 (transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK22755.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-44
Identity = 137/383 (35.77%), Postives = 182/383 (47.52%), Query Frame = 0

Query: 67  RHHFGQRDHRAHRRHDRFPRRHQLPKDSSSDEEDLQHWGDGRRQQLCFLEWIKNVESFFE 126
           RH + Q + R  R +  +  +  LP              DG+R    FL+W+KN E+FF 
Sbjct: 139 RHRYVQNE-RQQRENSEYKMKIDLPS------------YDGKRNIENFLDWLKNTENFFA 198

Query: 127 YMSTRDHKKVELVALKMKSGASAWWEQMETSRH--------------------------- 186
           YM T  +KKV LVALK+K GASAWW+Q+  +R                            
Sbjct: 199 YMGTTKNKKVHLVALKLKGGASAWWDQITVNRQKQGKHPIRSWEKMKKLMKQRFVPPNYE 258

Query: 187 ----------RFGTRSIADYTEEFHRLGARTNLGESDQYQVARSVSGLQADIKEKLQLQP 246
                     R G R  A+Y EEFHRLG RTNL E +++ ++  V GL+ D+KEK++LQP
Sbjct: 259 QTLYTQYQNCRQGMRKTAEYIEEFHRLGGRTNLMEGEKHLISWFVGGLRFDLKEKVKLQP 318

Query: 247 IGYLDEAIATAITVEEQQANRLKNQYQRRQLGDNQASSARKGTFLDKATSVNLVED---- 306
             +L EAI  A TVEE   NR K+  +R         +    + L  ATS   VE     
Sbjct: 319 FQHLSEAITYAETVEEMIENRAKSTRKRPWEPSASKKTTAGNSKLKNATSEKPVEQEESS 378

Query: 307 ---------------------------------------------FQDLDDSCDQ---ES 358
                                                         +D DD  ++   E 
Sbjct: 379 GKKEVPEGEKKGKNPYQRPFSGNCYRCGQMGHPSNQCPQRKTIAVAKDNDDGSNRSLGEF 438

BLAST of Moc02g16400 vs. NCBI nr
Match: XP_031744062.1 (uncharacterized protein LOC116404773 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 9.9e-40
Identity = 119/322 (36.96%), Postives = 164/322 (50.93%), Query Frame = 0

Query: 106 DGRRQQLCFLEWIKNVESFFEYMSTRDHKKVELVALKMKSGASAWWEQMETSRHRF---- 165
           DG+R    FL+WIK+ E+FF YM T + KKV LVALK+++GASAWW+Q+E +R R     
Sbjct: 37  DGKRNIEAFLDWIKSTENFFNYMDTPERKKVHLVALKLRAGASAWWDQLEINRQRCGKQP 96

Query: 166 ---------------------------------GTRSIADYTEEFHRLGARTNLGESDQY 225
                                            G RS+ADY EEFHRL ARTNL E++Q+
Sbjct: 97  IRSWEKMKKLLKARFLPPNYEQTLYNQYQNCRQGVRSVADYIEEFHRLSARTNLSENEQH 156

Query: 226 QVARSVSGLQADI-------------------KEKLQLQPI----GYLDEAIATAITVEE 285
           QVAR V     ++                   K K   QP     G   E     + VE 
Sbjct: 157 QVARFVGETVEEMIAIRSKNLNRRSAWETTSTKSKTNDQPSTSTKGKGKEVDNQEVAVER 216

Query: 286 QQANRLK----NQYQRRQLGD--NQASSARKGTFLDKATSVNLVED-FQDLDDSCDQESD 345
           ++    K    N Y R  LG       +        +  ++ + E+  Q  +DS   E++
Sbjct: 217 KKEQTFKPSGQNSYSRPSLGKCFRCGQTGHLSNNCPQRKTIAIAEEGGQTSEDSI--EAE 276

Query: 346 EEVVYLAPNEGEQVSCVLERILLAPKTQSGQQRHLLFRTRCTISGKVCNVIIDSGSTENV 358
           EE   +  ++GE+VSC ++R+L+ PK +   QRH LF+TRCTI+G+VC+VIIDSGS+EN 
Sbjct: 277 EETELIEADDGERVSCFIQRVLIMPKEEKNLQRHCLFKTRCTINGRVCDVIIDSGSSENF 336

BLAST of Moc02g16400 vs. NCBI nr
Match: KAA0059834.1 (uncharacterized protein E6C27_scaffold108G001170 [Cucumis melo var. makuwa])

HSP 1 Score: 173.3 bits (438), Expect = 3.8e-39
Identity = 112/324 (34.57%), Postives = 175/324 (54.01%), Query Frame = 0

Query: 106 DGRRQQLCFLEWIKNVESFFEYMSTRDHKKVELVALKMKSGASAWWEQMETSRHRF---- 165
           +G+R    FL+W+K+ ++FF YM T D KKV LVAL+++ GASAWW+Q+E +R R     
Sbjct: 9   NGKRDTESFLDWVKSTKNFFNYMDTLDRKKVHLVALELQGGASAWWDQLEINRQRCGKPP 68

Query: 166 ---------------------------------GTRSIADYTEEFHRLGARTNLGESDQY 225
                                            G+RSIA+Y EEFHRL ARTNLGE++Q+
Sbjct: 69  ICSWEKMKKLLKARFLPPNYEQTIYNQYQNCHQGSRSIAEYIEEFHRLSARTNLGENEQH 128

Query: 226 QVARSVSGLQADIKEKLQLQPIGYLDEAIATAITVEEQQA-NRLKNQYQRRQLGD----- 285
           Q+AR +     +  E++ + P+   +      +   ++Q+ +   N+     +G      
Sbjct: 129 QIARFI----GETVEEMMVAPLKSSNRKTTWKVNFSKKQSYSSRTNEQPSTSVGGKSKDV 188

Query: 286 NQASSARKGTFLDKATSVN------LVEDFQ-----DLDDSC------------------ 345
           +   +A+K    DK  S N      L + F+      L ++C                  
Sbjct: 189 DTQDAAKKKDNTDKGKSQNTYTRPSLEKCFRCGQSGHLSNNCPQRETISLADKESNSISE 248

Query: 346 -DQESDEEVVYLAPNEGEQVSCVLERILLAPKTQSGQQRHLLFRTRCTISGKVCNVIIDS 357
            D+E +EE  ++  ++G+++S V++R+L+APK ++  QRH LF+TRCTI+ +VC+VIIDS
Sbjct: 249 DDKEEEEEAEFIEADDGDRISYVIQRVLIAPKEETNPQRHSLFKTRCTINRRVCDVIIDS 308

BLAST of Moc02g16400 vs. ExPASy TrEMBL
Match: A0A5D3DGR0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00870 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.4e-44
Identity = 137/383 (35.77%), Postives = 182/383 (47.52%), Query Frame = 0

Query: 67  RHHFGQRDHRAHRRHDRFPRRHQLPKDSSSDEEDLQHWGDGRRQQLCFLEWIKNVESFFE 126
           RH + Q + R  R +  +  +  LP              DG+R    FL+W+KN E+FF 
Sbjct: 139 RHRYVQNE-RQQRENSEYKMKIDLPS------------YDGKRNIENFLDWLKNTENFFA 198

Query: 127 YMSTRDHKKVELVALKMKSGASAWWEQMETSRH--------------------------- 186
           YM T  +KKV LVALK+K GASAWW+Q+  +R                            
Sbjct: 199 YMGTTKNKKVHLVALKLKGGASAWWDQITVNRQKQGKHPIRSWEKMKKLMKQRFVPPNYE 258

Query: 187 ----------RFGTRSIADYTEEFHRLGARTNLGESDQYQVARSVSGLQADIKEKLQLQP 246
                     R G R  A+Y EEFHRLG RTNL E +++ ++  V GL+ D+KEK++LQP
Sbjct: 259 QTLYTQYQNCRQGMRKTAEYIEEFHRLGGRTNLMEGEKHLISWFVGGLRFDLKEKVKLQP 318

Query: 247 IGYLDEAIATAITVEEQQANRLKNQYQRRQLGDNQASSARKGTFLDKATSVNLVED---- 306
             +L EAI  A TVEE   NR K+  +R         +    + L  ATS   VE     
Sbjct: 319 FQHLSEAITYAETVEEMIENRAKSTRKRPWEPSASKKTTAGNSKLKNATSEKPVEQEESS 378

Query: 307 ---------------------------------------------FQDLDDSCDQ---ES 358
                                                         +D DD  ++   E 
Sbjct: 379 GKKEVPEGEKKGKNPYQRPFSGNCYRCGQMGHPSNQCPQRKTIAVAKDNDDGSNRSLGEF 438

BLAST of Moc02g16400 vs. ExPASy TrEMBL
Match: A0A5A7UXS4 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G001170 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.8e-39
Identity = 112/324 (34.57%), Postives = 175/324 (54.01%), Query Frame = 0

Query: 106 DGRRQQLCFLEWIKNVESFFEYMSTRDHKKVELVALKMKSGASAWWEQMETSRHRF---- 165
           +G+R    FL+W+K+ ++FF YM T D KKV LVAL+++ GASAWW+Q+E +R R     
Sbjct: 9   NGKRDTESFLDWVKSTKNFFNYMDTLDRKKVHLVALELQGGASAWWDQLEINRQRCGKPP 68

Query: 166 ---------------------------------GTRSIADYTEEFHRLGARTNLGESDQY 225
                                            G+RSIA+Y EEFHRL ARTNLGE++Q+
Sbjct: 69  ICSWEKMKKLLKARFLPPNYEQTIYNQYQNCHQGSRSIAEYIEEFHRLSARTNLGENEQH 128

Query: 226 QVARSVSGLQADIKEKLQLQPIGYLDEAIATAITVEEQQA-NRLKNQYQRRQLGD----- 285
           Q+AR +     +  E++ + P+   +      +   ++Q+ +   N+     +G      
Sbjct: 129 QIARFI----GETVEEMMVAPLKSSNRKTTWKVNFSKKQSYSSRTNEQPSTSVGGKSKDV 188

Query: 286 NQASSARKGTFLDKATSVN------LVEDFQ-----DLDDSC------------------ 345
           +   +A+K    DK  S N      L + F+      L ++C                  
Sbjct: 189 DTQDAAKKKDNTDKGKSQNTYTRPSLEKCFRCGQSGHLSNNCPQRETISLADKESNSISE 248

Query: 346 -DQESDEEVVYLAPNEGEQVSCVLERILLAPKTQSGQQRHLLFRTRCTISGKVCNVIIDS 357
            D+E +EE  ++  ++G+++S V++R+L+APK ++  QRH LF+TRCTI+ +VC+VIIDS
Sbjct: 249 DDKEEEEEAEFIEADDGDRISYVIQRVLIAPKEETNPQRHSLFKTRCTINRRVCDVIIDS 308

BLAST of Moc02g16400 vs. ExPASy TrEMBL
Match: A0A5D3E417 (Transposon Ty3-I Gag-Pol polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00630 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.5e-37
Identity = 105/287 (36.59%), Postives = 153/287 (53.31%), Query Frame = 0

Query: 106 DGRRQQLCFLEWIKNVESFFEYMSTRDHKKVELVALKMKSGASAW---WEQMETSRH--- 165
           +G+R    FL+WIKN E+FF+YM   D KKV LVALK+K GASAW   + Q+  +RH   
Sbjct: 136 NGKRDIESFLDWIKNTENFFKYMVPPDRKKVHLVALKLKGGASAWPVSYPQI-MNRHYSQ 195

Query: 166 ----RFGTRSIADYTEEFHRLGARTNLGESDQYQVARSVSGLQADIKEKLQLQPIGYLDE 225
               R G++ +A+Y EEFHRLGAR NL E++Q+Q+AR + GL+ DIKEK++L     L E
Sbjct: 196 YQNCRQGSQLVAEYIEEFHRLGARINLSENEQHQIARFIGGLRFDIKEKVKLHSFRVLSE 255

Query: 226 AIATAITVEEQQANRLKNQYQRRQLGDNQASSARKGTFLDKATSVNLVE-----DFQD-- 285
           AI+ A TVEE    RLKN  +R     N +     G   D+  S ++V+     D Q+  
Sbjct: 256 AISLAETVEEMMTVRLKNSNRRTAWETNPSKKQSYGKKTDEQPSTSMVDKGKAIDIQETN 315

Query: 286 -------------------------------LDDSC-------------------DQESD 326
                                          L ++C                   D+E +
Sbjct: 316 KKKESLVRGKTQNNYTRPSLGKCFRCGEPGHLSNNCSQRKTIALAEDEDTYMSGTDEEEE 375

BLAST of Moc02g16400 vs. ExPASy TrEMBL
Match: A0A5D3C3X9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00540 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.6e-35
Identity = 132/396 (33.33%), Postives = 201/396 (50.76%), Query Frame = 0

Query: 23  IQDLLPRQESLPLPRRHSDVPLTLHQEVYPRAPRDYQEHLF-------APPRHHFGQRDH 82
           +Q +L R E+L  P+        +HQE   R  RD+ +          A   H   + D 
Sbjct: 144 LQVVLQRLEALTPPQ-------NVHQEDQERV-RDWGQRGIRGAGIRRAEINHQESRYDV 203

Query: 83  RAHRR-----HDRFPRR---HQLPKDSSSDEEDLQH------------WGDGRRQQLCFL 142
           +  RR      + FPR    +Q P+D SS +++LQ               D RR++L   
Sbjct: 204 QERRRPFQDYQNPFPRNQEMYQEPQDWSSSDDELQERPIFNQNRGFRPQFDERRRELAES 263

Query: 143 EWIKNVESFFEYMSTRDHKKVELVALKMKSGASAWWEQMETSRHRFGTRSIADYTEEFHR 202
           +   ++ S+       D K+    ++K +  +       +    R GTR++ADY +EFH 
Sbjct: 264 KMKIDLPSY-------DGKESPFSSIKAEGWSVDMTLYSQYQNCRQGTRTVADYIKEFHH 323

Query: 203 LGARTNLGESDQYQVARSVSGLQADIKEKLQLQPIGYLDEAIATAITVEEQQANRLKN-- 262
           LGAR NL E++Q+Q+AR + GL+ DIKEK++LQP  +L EAI+ A TVEE  A R KN  
Sbjct: 324 LGARINLSENEQHQIARFIGGLRFDIKEKIKLQPFRFLSEAISFAETVEEMNAIRTKNPS 383

Query: 263 --------QYQRRQLGDNQASS-ARKGTFLDK------------------------ATSV 322
                   + + + L D++      KG   +K                          ++
Sbjct: 384 TSTQGKGKEVETQDLADDKKREVVNKGKVQNKYNRPSLGKCFRCGQPGHPSNTCPQRKTI 443

Query: 323 NLVEDFQDLDDSCDQESDEEVVYLAPNEGEQVSCVLERILLAPKTQSGQQRHLLFRTRCT 357
            L +  +D      +E +EE   +  ++G +VSCV++R+LLAPK ++  Q H LF+TRCT
Sbjct: 444 ALADKEEDSASESSEELEEEAKLIEADDGHRVSCVIQRVLLAPKEETNPQCHSLFKTRCT 503

BLAST of Moc02g16400 vs. ExPASy TrEMBL
Match: A0A5B7BER3 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_036800 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.6e-35
Identity = 119/351 (33.90%), Postives = 170/351 (48.43%), Query Frame = 0

Query: 114 FLEWIKNVESFFEYMSTRDHKKVELVALKMKSGASAWWEQMETSRHRFGT---------- 173
           FL+WI  VE+FF+ M   D K+V+LVA K+K GASAWW+Q++ +R R G           
Sbjct: 136 FLDWISEVETFFDCMEISDDKQVKLVAYKLKGGASAWWDQVQQNRRRQGKQPVRTWQKMR 195

Query: 174 ---------------------------RSIADYTEEFHRLGARTNLGESDQYQVARSVSG 233
                                      RS+++Y++EF+ L +R NL E++  QVAR V G
Sbjct: 196 RLLRERFLPVDYEQVLYQQYQNCRQGGRSVSEYSQEFNTLSSRNNLTETENQQVARYVGG 255

Query: 234 LQADIKEKLQLQPIGYLDEAIATAITVEEQQANR--------------LKNQYQRRQLGD 293
           L+A I+++L L+ I  L+EA + A+ VE QQ+ +               +NQ  R +  +
Sbjct: 256 LRATIQDQLNLRTIWNLNEATSLALKVEAQQSRQPLRSQNSARSYPDSSRNQQNRDKQIE 315

Query: 294 NQASSARKGTFLDKATS------------------------------------------- 353
                 +K T  D+A+S                                           
Sbjct: 316 GVVPQPQKITPRDQASSSKNQNTPIAPSQKSTNPYARPIPGKCFRCQQPGHRSNECPNRR 375

Query: 354 -VNLVEDFQDLDDSCDQESDEEVVY---------LAPNEGEQVSCVLERILLAPKTQSGQ 358
            VN+V   +  D+S D E++EE  Y            +EGE VSCV++R+LL PK +   
Sbjct: 376 QVNMVGVTE--DNSPDFENEEEAEYQDEYGGAEITEGDEGEHVSCVVQRLLLVPKQEVDP 435

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031741035.12.1e-5039.71uncharacterized protein LOC116403692 [Cucumis sativus][more]
XP_031743026.15.2e-4938.37uncharacterized protein LOC116404533 [Cucumis sativus][more]
KAA0054966.13.0e-4435.77transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK2... [more]
XP_031744062.19.9e-4036.96uncharacterized protein LOC116404773 [Cucumis sativus][more]
KAA0059834.13.8e-3934.57uncharacterized protein E6C27_scaffold108G001170 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DGR01.4e-4435.77Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... [more]
A0A5A7UXS41.8e-3934.57CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5D3E4176.5e-3736.59Transposon Ty3-I Gag-Pol polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1... [more]
A0A5D3C3X93.6e-3533.33Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13... [more]
A0A5B7BER33.6e-3533.90Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_036800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 301..362
e-value: 1.8E-6
score: 29.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..102
NoneNo IPR availablePANTHERPTHR35046:SF6ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 270..353
NoneNo IPR availablePANTHERPTHR35046ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 68..247
NoneNo IPR availablePANTHERPTHR35046ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 270..353
NoneNo IPR availablePANTHERPTHR35046:SF6ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 68..247
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 317..360
e-value: 4.68424E-6
score: 42.7088
IPR001969Aspartic peptidase, active sitePROSITEPS00141ASP_PROTEASEcoord: 328..339

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc02g16400.1Moc02g16400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004190 aspartic-type endopeptidase activity