Moc02g16310 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g16310
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ras-related protein Rab-18
Location	chr2: 12274504 .. 12279081 (-)
RNA-Seq Expression	Moc02g16310
Synteny	Moc02g16310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCGTCGTCGAATCAATCTGAGTTTGATTACTTGTTCAAGTTGTTGATGATTGGGGACTCGGGGGTTGGTAAAAGTAGTCTGCTATTGAGTTTCACTTCTGATAGCTTCGAGGATCTCTCACCAACAATCGGTAAGTTCCGCCATTACAGATCGTTTTGTTGAAAATTATTTTGAATTTTTCTTTCATTTTGTGGGATCTTGCTCATTTTGTTGGAAATGGACGTAGACAATCGGTTGTTTGCTGCCGAAACATTGGAGTATCATTTTAGAGAAAATGTTGATGTTTCACTTTCTTCACATTCTGCATGGGATTGAGGGCAACAAATTAAACGAAAGAGAAAATCCAGAGGGTCATGGTTAAGAAAATGAAGAATGAAATTGTTAATCATCAAAGACCAGAATGAGCTCTTAGACAATCAAGGCAAATGTCTGAAATGCCAAAATGAGAAGTCATGAATAGATAATTTGTTAACGGAATGTAACCTTTTTGAAGTAATGTATGGTTGATTTTTCTTTCTTCGTATTGCAGGATAAGTATTATAGCATTATTTGCAGGATGAGCATTATAGCACTACAAAAAGAGCTTCATTGTAGGCATTTTATTAATTGTTAATATTGTTTCTACCAGCTTTACTATTACTGGTCATTTAGAGTTCTGAATTCTGTTTCTGCTTACTAACCAGTGCAGTGTAATCTGTGTGTATGTGTTTGTGTTTTTGTGGGGCTACGAAATAGAAAAGATTGTCTCTATACCTGTGTAAATTTGGCTGAATTTCAAGATGATTAATTGAAATGATGGATTATATGCCATTCCTTTTATTAAGTTAAAATTAACAAAATTGATAATTTGAAATGAATTTTATTATAATCCTTGAGATACATGTTTCATTGTGTTGGGTTGATTAAAATGCAAATTGTCACAAGCTTGGCTCATGTCGACGTAATCCGCCTTGCAATGACAGGACAACCATTAGAGAAATAGAAGACAATTCTACTTAATTGATTGTTATTTTGCTTGCTCAGGTGTGGATTTCAAGGTAAAGTATGTTACTGCTGGGGGTAAGAAGCTAAAGCTTGCAATTTGGGATACAGGTAACTAAGCTAGCCCAACTACATTATTTTCATAGGCATGACATTCTTCTATTCTTTCCTCTTCCTCCCTTTTATTTTTTGAGAGAAATCTATTCTCTTTCTCACACATACAAAGTACATGTTTTTCAGAGAAGCACGTAATGGACAAGTAATCTGATTAATTTACCAGAAGTTTCATAATTAATAATCAATTTCAATTGTTTAAATACAATATTGAAGAATAGGCACATGGATAAATAAGTTATAGATACGTTCAGTTTTGGCCATTGTCATATTTTGTTTTTTGTTCAGCACGGAATTTTACCACACGACCTGATCATGAACTCCACCATAGAATGTTGGAATCTAGTTGGAAATCCGAAGCTGGAATCTAGTAGGAAATCTGTGCAGTAATCCTTAATTCTTCATATTTTTTTCCTGTGTTAATAATAGAAGTAGAACAATTTGATATATGAACTATGAGGCATAATTAAATGGCATTGACAAGATAATAAATTTAATCAATTGAAAAACAGATCTAGATGGCAAAAATTGATGTTGATTCGTCATACCATACTAGAGCTATTTCATTGAGTTTAGAAACTTGTTATCATTAGTATTATGTCTCAAACAAATCTATTCTGCAAAGTCTAACTAAATGTTCAGTTCTTAAATGTTTTCTTGTACTGAATGCTGAATCTGCATGAAATAAACGTTCATCACATCTCCCAGTAAGGAATTCTGTAAAGTCTAACTAAATGTTCAGTTCTTAAATGTTTTCTTGTACTGAATCTGCATGAAATAAACGTTCATCACATCTCACAGTAAGGAATTCTATAAAGTCTAACTAAATGTTCAATCCTACAGCTGGGCAGGAGAGATTCAGAACATTGACGAGTTCGTACTACAGAGGTGCTCAAGGGATCATTATGGGTGTGTTTTATTCCCCCCTTTTACGTGATTATTTTAAAGACTGAACTAATAAAATGTTGTCTCCAATATTCTAAAATTGTAAATATCTTAGATGTGATTAGTTTAAAAAAATGTTAATGATTTTATCAAATTGTAAGTCGTTCACTTGTTTGGCTATCCAATATTTTGCAATTGCTTTTTCTGTCTTCTAGTCTTGATTTTGACATGAAAGGTCAACTGTGGCAGTTTATGATGTTACACGGAGAGAGACATTCACAAATCTGTCTGAGGTATGGGCGAAGGAAATAGACCTATATTCAACAAATCAAGACTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGTATGCGTCTTCAACTTCCATTTGAAAGTATCCATATGCCTGAAGCAGCTGGCGGGCTTTAACATATTTCTTATTACAGTGACTTGGGTTAGTGTGTGACATTTGTGTGGATATTGATTAACTGATCAAATGTATAGTAAATTGAAATTCCCATGCCAAATGAAAATTCAAGTTAAATATTGAGAACTTTTTGAACGTAATTTAAGTTATGAATAAGTGATTTTTCAGAAGCCAAAGTATTTTTGATTTGAGTTGTTTGGAATGTATGAATTCAAAATTGGAAATTCACTTCCAATGGAATTCCATTGTCGTTTGTAACAATAATTTAGTTTTAGAAACGAGTTATATTTTTTATTTATATTTTAAAAAATAAAAATTTTGGGATTTTGTGGGGTATTTGGTTGGAAAGAAAAGTTAGAATCTTTAGGGGGTGGAGAGAGAATGGGAGTCTGTTTGGGACCTCATAAGGTTTAATGTCTTCTTATGAGGTCTGTTTCGAATTTGTTTTGTAATTATTAGTTAGGTTCTATTCTTTTGGATTGGAAGCCATTTATTTAGGCTGACTTTCTTTTTCTGGATTGTTGTTTTTGTATGCCCTTGTCTTTGTCTTTGTTTTTGTTTTTGTTTGTCTCAATGAAAAGTTCGGTTTCTTATTAGAAAAGAAATATATTTCTTTAAAAAATTTAGGAATTTGCCAATTAGGTAGTTCAGCTCAATTCCTTCTTTTTCCTATTGAAAAAATTTCAATTCATTTATTAAAATAAAGACTGAGATCCCTTTTCTTTTTGGAATCCATGGATATCTTCTCTAACTTATTGTGTCCTTTTAATGAAGTGAGGTTAAGATAATCAGATGCATTTTTACCAAAATAGTTTATTAAGGCAACATTTTGAATCTTCTTTATTATTTTTGCCAATCTGGGCAACTGGTTAAGGTATCATACATTTGTGCTAAAGATTAAGTGTTCAAATCCTTACCTCTAAATGAAATTCAACTTGACCCTTCATGCTATTATCAATTCTTTTCAACGACTTTAATTAGGCCATATCATTTCAGAGGAATTACATTTCTCATTTCCCTGTTACATTTGGAGGAACATTTCAAATTGATATAACTAACAGTGTTCCAGTTGCATTTTTTGTAACAAAAAATTGAACTTTCAATGGGAAGAATGAAAGAACAAAAGCAAGGTTGCACAAAGATTGGAAAAGAGAAAAGAAAGAAGAATGGCTAAGGGCTATACAATGGGAATTGGTGTCATCTATGAGTAATTAGTACTCAGTTGATGGTTAAAAATGAACTATCAACCAAGACTTTGAAATAAAATAAGTAATTCCTTTGATATTTTCTCAAGAAGGAATTATTACTGCGGTGGTTTCATGCTTTATTTCGTTTTTTGTATGGATTTTATTTAAAATTGACGTGCAAAATGGGAATAGTCTTTGTAGTTGAGATGCATCAAAAGGAACCGATTTCTGGTTCCTTTTACTCTGCAGTCAGGTCACACCTTGTCATAAATGATGGTTTTGCTTTTTAATGGACATGATTATATTGTGAAGTTAGGTTTATCTGAGACCCTTTTAATCTCTTCTGATATAGTTCTTCATTATCTGCATCTAATTCATTTTGTATCTGGATTTTTCTTTCTCAGGAAAGTTATAGGACGGTAACAAAGAAGGAGGGAATTGACATGGCCAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAATGTACAACAATGCTTTGAAGAACTTGTTCTAAAGGTAGATTATCATTTTAGTACGATTTTTAGTTCACTTTTCGGTCAAAGGATTCATATAATTGATTTGTGACCATCAGGAACGTGTCACTTCCCCAGTTGTGACACTCACATTTCTGATATTATCAAAGGGAAAAAAAAATGTCGCATTCCTGGTTATAGGTTAAGATTAATGAGAGTTGCTAGATAATGGAAATTTTTTTGAACCTCTTGAGAAGTCGTGTTTTAAGATTGATTATTTTCCTTTTTTGACATCTTGAATTAATATGCTAATTTACTGATTTACTGGACATTTGCGTGGATGACAAAGCATGATAATAAGGAATCTTATATGCAGATTCTCGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATTTTCAAGGAAAAGCCTCCACAGCCCGACGCATCCACAAGCAGTTGTTGCTGA

mRNA sequence

ATGGATTCGTCGTCGAATCAATCTGAGTTTGATTACTTGTTCAAGTTGTTGATGATTGGGGACTCGGGGGTTGGTAAAAGTAGTCTGCTATTGAGTTTCACTTCTGATAGCTTCGAGGATCTCTCACCAACAATCGGTGTGGATTTCAAGGTAAAGTATGTTACTGCTGGGGGTAAGAAGCTAAAGCTTGCAATTTGGGATACAGCTGGGCAGGAGAGATTCAGAACATTGACGAGTTCGTACTACAGAGGTGCTCAAGGGATCATTATGGTTTATGATGTTACACGGAGAGAGACATTCACAAATCTGTCTGAGGTATGGGCGAAGGAAATAGACCTATATTCAACAAATCAAGACTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACGGTAACAAAGAAGGAGGGAATTGACATGGCCAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAATGTACAACAATGCTTTGAAGAACTTGTTCTAAAGATTCTCGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATTTTCAAGGAAAAGCCTCCACAGCCCGACGCATCCACAAGCAGTTGTTGCTGA

Coding sequence (CDS)

ATGGATTCGTCGTCGAATCAATCTGAGTTTGATTACTTGTTCAAGTTGTTGATGATTGGGGACTCGGGGGTTGGTAAAAGTAGTCTGCTATTGAGTTTCACTTCTGATAGCTTCGAGGATCTCTCACCAACAATCGGTGTGGATTTCAAGGTAAAGTATGTTACTGCTGGGGGTAAGAAGCTAAAGCTTGCAATTTGGGATACAGCTGGGCAGGAGAGATTCAGAACATTGACGAGTTCGTACTACAGAGGTGCTCAAGGGATCATTATGGTTTATGATGTTACACGGAGAGAGACATTCACAAATCTGTCTGAGGTATGGGCGAAGGAAATAGACCTATATTCAACAAATCAAGACTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACGGTAACAAAGAAGGAGGGAATTGACATGGCCAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAATGTACAACAATGCTTTGAAGAACTTGTTCTAAAGATTCTCGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATTTTCAAGGAAAAGCCTCCACAGCCCGACGCATCCACAAGCAGTTGTTGCTGA

Protein sequence

MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC

Homology

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BLAST of Moc02g16310 vs. NCBI nr
Match: XP_022156664.1 (ras-related protein RABC1-like [Momordica charantia])

HSP 1 Score: 420.2 bits (1079), Expect = 1.0e-113
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LLSEGSKGVRRNIFKEKPPQPDASTSSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

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BLAST of Moc02g16310 vs. NCBI nr
Match: XP_038901438.1 (ras-related protein RABC1-like [Benincasa hispida])

HSP 1 Score: 414.1 bits (1063), Expect = 7.3e-112
Identity = 204/209 (97.61%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFT+DSFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTTDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWA+EIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAREIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES+RTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESFRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LLSEGSKGVRRNIFKEKPPQPDASTSSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

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BLAST of Moc02g16310 vs. NCBI nr
Match: XP_004147350.1 (ras-related protein RABC1 [Cucumis sativus] >KGN62201.1 hypothetical protein Csa_016939 [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 8.1e-111
Identity = 203/209 (97.13%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LLSEGSKGVRRNIFKEKPPQ DASTSSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209

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BLAST of Moc02g16310 vs. NCBI nr
Match: XP_008460888.1 (PREDICTED: ras-related protein RABC1-like [Cucumis melo] >KAA0040756.1 ras-related protein RABC1-like [Cucumis melo var. makuwa] >TYK02071.1 ras-related protein RABC1-like [Cucumis melo var. makuwa])

HSP 1 Score: 408.3 bits (1048), Expect = 4.0e-110
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LLSEGSKGVRRNIFKEKPPQ DAS SSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209

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BLAST of Moc02g16310 vs. NCBI nr
Match: XP_022971628.1 (ras-related protein RABC1-like [Cucurbita maxima])

HSP 1 Score: 405.2 bits (1040), Expect = 3.4e-109
Identity = 200/209 (95.69%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGK+
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES+RTVTKKEGIDMARE GCLF ECSAKTRVNVQQCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESFRTVTKKEGIDMARECGCLFTECSAKTRVNVQQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LLSEGSKGVR+NIFKEKPPQPDAS SSCC
Sbjct: 181 LLSEGSKGVRKNIFKEKPPQPDASASSCC 209

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BLAST of Moc02g16310 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.0e-97
Identity = 173/209 (82.78%), Postives = 193/209 (92.34%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M SSS Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLS++WAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           L +EGS G ++NIFK+ P Q  +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

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BLAST of Moc02g16310 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.1e-84
Identity = 148/209 (70.81%), Postives = 177/209 (84.69%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M SSS QS +D  FK+L+IGDSGVGKSSLL+SF S S EDL+PTIGVDFK+K +T GGK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETFTNL +VW KEI+LYSTNQ+C
Sbjct: 61  LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           ++MLVGNKVD+ES R V+++EGI +A+E  C+F+ECSA+TR NV+QCFEEL LKI++ PS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LL EGS  V+RNI K+KP     + S CC
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

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BLAST of Moc02g16310 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 9.7e-75
Identity = 138/209 (66.03%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M SSS QS +D  FK+L+IGDSGVGKSSLLLSF S S EDL+PTIGVDFK+K +   GK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+RETF NL+++WAKEI+LYSTN DC
Sbjct: 61  LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR NV  CFEEL LKI++ PS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LL EGS  V+R       P   A    CC
Sbjct: 181 LLEEGSSSVKRK------PDYRAHQGRCC 203

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BLAST of Moc02g16310 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.4e-59
Identity = 114/179 (63.69%), Postives = 137/179 (76.54%), Query Frame = 0


Query: 11  DYLFKLLMIGDSGVGKSSLLLSFTSDSFED-LSPTIGVDFKVKYVTAGGKKLKLAIWDTA 70
           DY FK+L++GDSGVGKS +L  FTS  FE+  + TIGVDFKVKY+TA GK+ KL IWDTA
Sbjct: 7   DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTA 66

Query: 71  GQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDCIKMLVGNKV 130
           GQERFRTLTSSYYRGAQGII VYDVTRR+TF +L   W +E D+YST +  IKM+V NKV
Sbjct: 67  GQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKV 126

Query: 131 DKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKG 189
           D  + R V+ +EG D AR +GCLF+E SA+  + V Q FEEL+LKILDTP LL   + G
Sbjct: 127 DLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAVG 185

[Close]

BLAST of Moc02g16310 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53
Identity = 111/195 (56.92%), Postives = 138/195 (70.77%), Query Frame = 0


Query: 15  KLLMIGDSGVGKSSLLLSFTSDSFE-DLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQER 74
           K+L+IG+SGVGKSSLLL FT D+F+ +L+ TIGVDFKVK +   G + KLAIWDTAGQER
Sbjct: 10  KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQER 69

Query: 75  FRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKES 134
           FRTLT SYYRGAQG+I+VYDVT+R+TFT L E W  E++ Y T  D +KMLVGNK+DK++
Sbjct: 70  FRTLTPSYYRGAQGVILVYDVTKRDTFTKL-ENWLNELETYCTRNDLVKMLVGNKIDKDN 129

Query: 135 YRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNI 194
            R V + EG+  AR++  LFIE SAKTR  VQ  FEELV KIL TP L     +     +
Sbjct: 130 -REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHGVQL 189

Query: 195 FKEKPPQPDASTSSC 209
              +P +  A    C
Sbjct: 190 SDNEPQRQGACGGYC 202

[Close]

BLAST of Moc02g16310 vs. ExPASy TrEMBL
Match: A0A6J1DU73 (ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111023514 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 4.9e-114
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LLSEGSKGVRRNIFKEKPPQPDASTSSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

[Close]

BLAST of Moc02g16310 vs. ExPASy TrEMBL
Match: A0A0A0LQC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334520 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 3.9e-111
Identity = 203/209 (97.13%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LLSEGSKGVRRNIFKEKPPQ DASTSSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209

[Close]

BLAST of Moc02g16310 vs. ExPASy TrEMBL
Match: A0A5D3BQN6 (Ras-related protein RABC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00560 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.9e-110
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LLSEGSKGVRRNIFKEKPPQ DAS SSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of Moc02g16310 vs. ExPASy TrEMBL
Match: A0A1S3CDH6 (ras-related protein RABC1-like OS=Cucumis melo OX=3656 GN=LOC103499629 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.9e-110
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LLSEGSKGVRRNIFKEKPPQ DAS SSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of Moc02g16310 vs. ExPASy TrEMBL
Match: A0A6J1I7F2 (ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111470311 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.6e-109
Identity = 200/209 (95.69%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGK+
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES+RTVTKKEGIDMARE GCLF ECSAKTRVNVQQCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESFRTVTKKEGIDMARECGCLFTECSAKTRVNVQQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LLSEGSKGVR+NIFKEKPPQPDAS SSCC
Sbjct: 181 LLSEGSKGVRKNIFKEKPPQPDASASSCC 209

[Close]

BLAST of Moc02g16310 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 355.5 bits (911), Expect = 2.9e-98
Identity = 173/209 (82.78%), Postives = 193/209 (92.34%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M SSS Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLS++WAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           L +EGS G ++NIFK+ P Q  +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of Moc02g16310 vs. TAIR 10
Match: AT1G43890.2 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 355.5 bits (911), Expect = 2.9e-98
Identity = 173/209 (82.78%), Postives = 193/209 (92.34%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M SSS Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLS++WAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           L +EGS G ++NIFK+ P Q  +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of Moc02g16310 vs. TAIR 10
Match: AT1G43890.3 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 355.5 bits (911), Expect = 2.9e-98
Identity = 173/209 (82.78%), Postives = 193/209 (92.34%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M SSS Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLS++WAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           L +EGS G ++NIFK+ P Q  +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of Moc02g16310 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 312.0 bits (798), Expect = 3.6e-85
Identity = 148/209 (70.81%), Postives = 177/209 (84.69%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M SSS QS +D  FK+L+IGDSGVGKSSLL+SF S S EDL+PTIGVDFK+K +T GGK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETFTNL +VW KEI+LYSTNQ+C
Sbjct: 61  LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           ++MLVGNKVD+ES R V+++EGI +A+E  C+F+ECSA+TR NV+QCFEEL LKI++ PS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LL EGS  V+RNI K+KP     + S CC
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of Moc02g16310 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 281.2 bits (718), Expect = 6.9e-76
Identity = 138/209 (66.03%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M SSS QS +D  FK+L+IGDSGVGKSSLLLSF S S EDL+PTIGVDFK+K +   GK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120
           LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+RETF NL+++WAKEI+LYSTN DC
Sbjct: 61  LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR NV  CFEEL LKI++ PS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 210
           LL EGS  V+R       P   A    CC
Sbjct: 181 LLEEGSSSVKRK------PDYRAHQGRCC 203

The following BLAST results are available for this feature:

BLAST of Moc02g16310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156664.1	1.0e-113	100.00	ras-related protein RABC1-like [Momordica charantia]	[more]
XP_038901438.1	7.3e-112	97.61	ras-related protein RABC1-like [Benincasa hispida]	[more]
XP_004147350.1	8.1e-111	97.13	ras-related protein RABC1 [Cucumis sativus] >KGN62201.1 hypothetical protein Csa...	[more]
XP_008460888.1	4.0e-110	96.65	PREDICTED: ras-related protein RABC1-like [Cucumis melo] >KAA0040756.1 ras-relat...	[more]
XP_022971628.1	3.4e-109	95.69	ras-related protein RABC1-like [Cucurbita maxima]	[more]

BLAST of Moc02g16310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23657	4.0e-97	82.78	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
O49841	5.1e-84	70.81	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	9.7e-75	66.03	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
P36862	4.4e-59	63.69	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q6DHC1	1.2e-53	56.92	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]

BLAST of Moc02g16310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU73	4.9e-114	100.00	ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111023514 PE...	[more]
A0A0A0LQC6	3.9e-111	97.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334520 PE=4 SV=1	[more]
A0A5D3BQN6	1.9e-110	96.65	Ras-related protein RABC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CDH6	1.9e-110	96.65	ras-related protein RABC1-like OS=Cucumis melo OX=3656 GN=LOC103499629 PE=4 SV=1	[more]
A0A6J1I7F2	1.6e-109	95.69	ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111470311 PE=4 ...	[more]

BLAST of Moc02g16310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43890.1	2.9e-98	82.78	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.2	2.9e-98	82.78	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.3	2.9e-98	82.78	RAB GTPASE HOMOLOG B18	[more]
AT5G03530.1	3.6e-85	70.81	RAB GTPase homolog C2A	[more]
AT3G09910.1	6.9e-76	66.03	RAB GTPase homolog C2B	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 52.76 coord: 118..131 score: 42.87 coord: 54..76 score: 51.16 coord: 36..52 score: 29.28 coord: 153..175 score: 41.29
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..178 e-value: 3.5E-31 score: 119.6
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..204 e-value: 1.2E-4 score: 17.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..178 e-value: 1.2E-97 score: 340.4
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 3..179 e-value: 0.0025 score: 2.8
None	No IPR available	PANTHER	PTHR24073:SF1000	SMALL MONOMERIC GTPASE-RELATED	coord: 1..209
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..209
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..209 score: 32.387035
None	No IPR available	PROSITE	PS51417	ARF	coord: 7..176 score: 8.581934
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..176 score: 10.122746
None	No IPR available	CDD	cd01863	Rab18	coord: 14..175 e-value: 2.65622E-105 score: 298.071
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..178 e-value: 1.1E-15 score: 68.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..176 e-value: 1.6E-55 score: 187.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..209 score: 18.416824
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..187 e-value: 3.3E-64 score: 217.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..194
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 1.3E-30 score: 104.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g16310.1	Moc02g16310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding