Moc02g16070 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g16070
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrotransposable element Tf2
Location	chr2: 12085477 .. 12086715 (+)
RNA-Seq Expression	Moc02g16070
Synteny	Moc02g16070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCTCCTCCCGGCCGGAGACGGCCAAACTCCCAGCGGCCTCCGCCGCAAATCAATCAGCGACCTCCGTCGCCGAGAAATGAATCAAACATTTCTCCACAAACAGCAGCATCCTCTTCTAGGGCTGTAATCTCAAAAGGCAAAAGGCCCATCACTCAAACATCTGTACCATCCCCGCTGAGTGCAGAAAATTATGCTATGGATATCCAGTTTGAAACGGTATCCAGGCGCTCTGCTACGGCAACCGCCGCTCCTTGACCTACGATTCCGAGGAATCCTTCCTCGTTTTCTCAAATAGTCAGGCCAAAGGTTTTCCAGCCCAGGCCGCCAATCAATGGTTATTTCACCAAGACTACCCTGGTGGATTCGATCATTGAGCCAGAGTTCGACGGACCATCGGTCCCAGAAGTCCGCAAACAAATATTTCCTCATGGCTTCAACTACCTGCCAGAGGATCTTCAAAAAACCCGAACTTATTATGAGTTTATTCTGGTAGATTCAAAGTCTGCAGAAATAACTCATGTTCCAGACGGAAATGATCCTTCTAGGACCATTTACTCAAAGCTCAGGATCTTCCACATCCTTACCCCTTCCTCTTGGAAACAGGGTATGTTTGTAGGGAAAAGACTGTCGGCAACCTTCCATCCTCAAACATACAATTACCGCGACTACATGAAAGCGTGGTATATTGTCTTCTGGCTGCAAGGGTACAACCATTCCTGGTTTGTGACATTCTGTAAGCAAGCTTACAAATCTCACTTTCCAATTTGGTTTCAAACATGGTGGACTTACTTTGGACTCTCCGAAGAAATTTTTCCGGTAGAAGTTCAGAGATCATACCACTTATTCCAACAAAGTATCTATGCGTCTCCCCTCTCTAAGACGTTTAGGTTCGCTTTGTACTTTCAAATACCATGGATCTTTTGCTGGAATTTCCAGCTAGGACCCAGTGGAAACTTCAAAGCGTTGAGTAAAGCTTTACGCATCAAATGGTGGGAAAAATTCGATTATTCCTACCTAGAATCAGACAAGATGAAGGATTGGTTAAAGACCAACGTTCATCTTGAAGACATAACAAGGCAAGAAGATGAGAGCTTCCTTCTAGCCAAAAATGCTGTCATAAGTTCACTTGCTGGAGCCGAATCTCAAGCCGACTTCAACTCGGTCCTCAATACCGTCGCAGTTCAGATCTCTGATCCAGACGGACGCAGACTCCTCTACCTCTGTCAACAATGA

mRNA sequence

ATGGAACCTCCTCCCGGCCGGAGACGGCCAAACTCCCAGCGGCCTCCGCCGCAAATCAATCAGCGACCTCCGTCGCCGAGAAATGAATCAAACATTTCTCCACAAACAGCAGCATCCTCTTCTAGGGCTGTAATCTCAAAAGGCAAAAGGCCCATCACTCAAACATCTGTACCATCCCCGCTGAGTGCAGAAAATTATGCTATGGATATCCAGTTTGAAACGCCCAGGCCGCCAATCAATGGTTATTTCACCAAGACTACCCTGGTGGATTCGATCATTGAGCCAGAGTTCGACGGACCATCGGTCCCAGAAGTCCGCAAACAAATATTTCCTCATGGCTTCAACTACCTGCCAGAGGATCTTCAAAAAACCCGAACTTATTATGAGTTTATTCTGGTAGATTCAAAGTCTGCAGAAATAACTCATGTTCCAGACGGAAATGATCCTTCTAGGACCATTTACTCAAAGCTCAGGATCTTCCACATCCTTACCCCTTCCTCTTGGAAACAGGGACCCAGTGGAAACTTCAAAGCGTTGAGTAAAGCTTTACGCATCAAATGGTGGGAAAAATTCGATTATTCCTACCTAGAATCAGACAAGATGAAGGATTGGTTAAAGACCAACGTTCATCTTGAAGACATAACAAGGCAAGAAGATGAGAGCTTCCTTCTAGCCAAAAATGCTGTCATAAGTTCACTTGCTGGAGCCGAATCTCAAGCCGACTTCAACTCGGTCCTCAATACCGTCGCAGTTCAGATCTCTGATCCAGACGGACGCAGACTCCTCTACCTCTGTCAACAATGA

Coding sequence (CDS)

ATGGAACCTCCTCCCGGCCGGAGACGGCCAAACTCCCAGCGGCCTCCGCCGCAAATCAATCAGCGACCTCCGTCGCCGAGAAATGAATCAAACATTTCTCCACAAACAGCAGCATCCTCTTCTAGGGCTGTAATCTCAAAAGGCAAAAGGCCCATCACTCAAACATCTGTACCATCCCCGCTGAGTGCAGAAAATTATGCTATGGATATCCAGTTTGAAACGCCCAGGCCGCCAATCAATGGTTATTTCACCAAGACTACCCTGGTGGATTCGATCATTGAGCCAGAGTTCGACGGACCATCGGTCCCAGAAGTCCGCAAACAAATATTTCCTCATGGCTTCAACTACCTGCCAGAGGATCTTCAAAAAACCCGAACTTATTATGAGTTTATTCTGGTAGATTCAAAGTCTGCAGAAATAACTCATGTTCCAGACGGAAATGATCCTTCTAGGACCATTTACTCAAAGCTCAGGATCTTCCACATCCTTACCCCTTCCTCTTGGAAACAGGGACCCAGTGGAAACTTCAAAGCGTTGAGTAAAGCTTTACGCATCAAATGGTGGGAAAAATTCGATTATTCCTACCTAGAATCAGACAAGATGAAGGATTGGTTAAAGACCAACGTTCATCTTGAAGACATAACAAGGCAAGAAGATGAGAGCTTCCTTCTAGCCAAAAATGCTGTCATAAGTTCACTTGCTGGAGCCGAATCTCAAGCCGACTTCAACTCGGTCCTCAATACCGTCGCAGTTCAGATCTCTGATCCAGACGGACGCAGACTCCTCTACCTCTGTCAACAATGA

Protein sequence

MEPPPGRRRPNSQRPPPQINQRPPSPRNESNISPQTAASSSRAVISKGKRPITQTSVPSPLSAENYAMDIQFETPRPPINGYFTKTTLVDSIIEPEFDGPSVPEVRKQIFPHGFNYLPEDLQKTRTYYEFILVDSKSAEITHVPDGNDPSRTIYSKLRIFHILTPSSWKQGPSGNFKALSKALRIKWWEKFDYSYLESDKMKDWLKTNVHLEDITRQEDESFLLAKNAVISSLAGAESQADFNSVLNTVAVQISDPDGRRLLYLCQQ

Homology

[Close]

BLAST of Moc02g16070 vs. NCBI nr
Match: KAA0050447.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 1.4e-78
Identity = 177/346 (51.16%), Postives = 205/346 (59.25%), Query Frame = 0


Query: 1   MEPPPGRRRPNSQRPPPQINQRPPSPRNESNISPQTAASSSRAVISKGKRPITQTSVPSP 60
           MEPPPGR+R  +QR  PQ NQ      N S   PQT ASSS    S+GK P  Q+S  SP
Sbjct: 1   MEPPPGRQRSPNQRQSPQSNQ------NNSPQRPQTVASSSETTPSRGK-PSAQSSAHSP 60

Query: 61  LSAENYAMDIQFE----------------------------------------------- 120
           +SAENYAMD+QFE                                               
Sbjct: 61  MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLCPSGPTTPNKRVASP 120

Query: 121 -------------------------TPRPPINGYFTKTTLVDSIIEPEFDGPSVPEVRKQ 180
                                     PRPPINGYFTKTT+VD  IEPEFDGP V EV  Q
Sbjct: 121 AASSSRSAISRNPSSYSQIVRLKVFQPRPPINGYFTKTTMVDLTIEPEFDGPFVHEVCNQ 180

Query: 181 IFPHGFNYLPEDLQKTRTYYEFILVDSKSAEITHVPDGNDPSRTIYSKLRIFHILTPSSW 240
           IFPH FN+LPEDL KTRT+YE+ILVDSKSAEITHVPD NDPS+ IYSK RIF +LTPS W
Sbjct: 181 IFPHEFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKFRIFRVLTPSYW 240

Query: 241 KQG-------------------PSGNFKALSKALRIKWWEKFDYSYLESDKMKDWLKTNV 256
           KQG                   PSGNFKALSK+L IKWWEKF+YS+LE +K+KDW K N+
Sbjct: 241 KQGMFVGRKFSHPFKPPSYNYRPSGNFKALSKSLIIKWWEKFNYSHLEVNKIKDWFKANI 300

[Close]

BLAST of Moc02g16070 vs. NCBI nr
Match: KAA0038025.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 295.0 bits (754), Expect = 6.3e-76
Identity = 151/238 (63.45%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 22  RPPSPRNESNISPQTAASSSRAVISKGKRPITQTSVPSPLSAENYAMDIQFETPRPPING 81
           RP  P   +      AASSSR+ I +     +Q   P            +   PRPPING
Sbjct: 46  RPSGPTTPNKRVASPAASSSRSAIPRNPSSYSQIVRP------------KIFQPRPPING 105

Query: 82  YFTKTTLVDSIIEPEFDGPSVPEVRKQIFPHGFNYLPEDLQKTRTYYEFILVDSKSAEIT 141
           YFTKTT+VD  IEPEFDGPSV EV  QIFPHGFN+LPEDL KTRT+YE+ILVDSKSAEIT
Sbjct: 106 YFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEIT 165

Query: 142 HVPDGNDPSRTIYSKLRIFHILTPSSWKQ----GPSGNFKALSKALRIKWWEKFDYSYLE 201
           HVPD NDPS+ IYSKLRIF +LTPS WKQ    GP GNFKALSK+LRIKWWEKF+YS+LE
Sbjct: 166 HVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFLGPLGNFKALSKSLRIKWWEKFNYSHLE 225

Query: 202 SDKMKDWLKTNVHLEDITRQEDESFLLAKNAVISSLAGAESQADFNSVLNTVAVQISD 256
            +K+KDW K N+HL+D+TRQEDE+FLL KNAV+S+L GA +Q +FNSV+N V V +SD
Sbjct: 226 VNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLVGASTQQEFNSVVNNVVVNLSD 271

[Close]

BLAST of Moc02g16070 vs. NCBI nr
Match: KAA0038028.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 288.1 bits (736), Expect = 7.7e-74
Identity = 152/263 (57.79%), Postives = 179/263 (68.06%), Query Frame = 0


Query: 22  RPPSPRNESNISPQTAASSSRAVISKGKRPITQTSVPSPLSAENYAMDIQFETPRPPING 81
           RP  P   +  +   AASSSR+VI +     +Q   P            +   PRPPING
Sbjct: 46  RPSGPTTPNKRAASPAASSSRSVIPRNPSSYSQIVRP------------KIFQPRPPING 105

Query: 82  YFTKTTLVDSIIEPEFDGPSVPEVRKQIFPHGFNYLPEDLQKTRTYYEFILVDSKSAEIT 141
           YFTKTT+VD  IEPEFDGPSV EV  QIFPHGFN+LPEDL KTRT+YE+ILVDSKSAEIT
Sbjct: 106 YFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEIT 165

Query: 142 HVPDGNDPSRTIYSKLRIFHILTPSSWKQ-----------------------------GP 201
           HVPD NDPS+ IYSKLRIF +LTPS WKQ                             GP
Sbjct: 166 HVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYILGP 225

Query: 202 SGNFKALSKALRIKWWEKFDYSYLESDKMKDWLKTNVHLEDITRQEDESFLLAKNAVISS 256
            GNFKALSK+LRIKWWEKF+YS+LE +K+KDW K N+HL+D+TRQEDE+FLL KNAV+S+
Sbjct: 226 LGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMST 285

[Close]

BLAST of Moc02g16070 vs. NCBI nr
Match: TYK28082.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 277.3 bits (708), Expect = 1.4e-70
Identity = 179/439 (40.77%), Postives = 210/439 (47.84%), Query Frame = 0


Query: 1   MEPPPGRRRPNSQRPPPQINQRPPSPRNESNISPQTAASSSRAVISKGKRPITQTSVPSP 60
           MEPPP R+RP ++R PP  NQ      N S   PQ+ ASSS    S+ + P +Q+S PSP
Sbjct: 1   MEPPPDRQRPPNERQPPPNNQ-----NNSSLKPPQSVASSSGTTPSRKEFP-SQSSAPSP 60

Query: 61  LSAENYAMDIQFE----------------------------------------------- 120
           +SAENYAMD+QFE                                               
Sbjct: 61  MSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTELLRPSGPTTPNKRAASP 120

Query: 121 -------------------------TPRPPINGYFTKTTLVDSIIEPEFDGPSVPEVRKQ 180
                                     PRPPINGYFTKTT+VD  IEPEFDGPSV EV  Q
Sbjct: 121 GASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 180

Query: 181 IFPHGFNYLPEDLQKTRTYYEFILVDSKSAEITHVPDGNDPSRTIYSKLRIFHILTPSSW 240
           IFPHGFN+LPEDL KTRT+YE+ILVDSKSAEITHVPD NDPS+ IYSKLRIF +LTPS W
Sbjct: 181 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240

Query: 241 KQ---------------------------------------------------------- 256
           KQ                                                          
Sbjct: 241 KQGMFVGRKFSHSFKQPSYNYRDYTKAWYIVFWLHAYNHFWFVTFCKQAYKMHFPNWFQN 300

[Close]

BLAST of Moc02g16070 vs. NCBI nr
Match: KAA0032918.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 277.3 bits (708), Expect = 1.4e-70
Identity = 179/439 (40.77%), Postives = 210/439 (47.84%), Query Frame = 0


Query: 1   MEPPPGRRRPNSQRPPPQINQRPPSPRNESNISPQTAASSSRAVISKGKRPITQTSVPSP 60
           MEPPP R+RP ++R PP  NQ      N S   PQ+ ASSS    S+ + P +Q+S PSP
Sbjct: 1   MEPPPDRQRPPNERQPPPNNQ-----NNSSLKPPQSVASSSGTTPSRKEFP-SQSSAPSP 60

Query: 61  LSAENYAMDIQFE----------------------------------------------- 120
           +SAENYAMD+QFE                                               
Sbjct: 61  MSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 120

Query: 121 -------------------------TPRPPINGYFTKTTLVDSIIEPEFDGPSVPEVRKQ 180
                                     PRPPINGYFTKTT+VD  IEPEFDGPSV EV  Q
Sbjct: 121 GASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 180

Query: 181 IFPHGFNYLPEDLQKTRTYYEFILVDSKSAEITHVPDGNDPSRTIYSKLRIFHILTPSSW 240
           IFPHGFN+LPEDL KTRT+YE+ILVDSKSAEITHVPD NDPS+ IYSKLRIF +LTPS W
Sbjct: 181 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240

Query: 241 KQ---------------------------------------------------------- 256
           KQ                                                          
Sbjct: 241 KQGMFVGRKFSHSFKQPSYNYRDYTKAWYIVFWLHAYNHFWFVTFCKQAYKMHFPNWFQN 300

[Close]

BLAST of Moc02g16070 vs. ExPASy TrEMBL
Match: A0A5A7U7T9 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00530 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 6.6e-79
Identity = 177/346 (51.16%), Postives = 205/346 (59.25%), Query Frame = 0


Query: 1   MEPPPGRRRPNSQRPPPQINQRPPSPRNESNISPQTAASSSRAVISKGKRPITQTSVPSP 60
           MEPPPGR+R  +QR  PQ NQ      N S   PQT ASSS    S+GK P  Q+S  SP
Sbjct: 1   MEPPPGRQRSPNQRQSPQSNQ------NNSPQRPQTVASSSETTPSRGK-PSAQSSAHSP 60

Query: 61  LSAENYAMDIQFE----------------------------------------------- 120
           +SAENYAMD+QFE                                               
Sbjct: 61  MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLCPSGPTTPNKRVASP 120

Query: 121 -------------------------TPRPPINGYFTKTTLVDSIIEPEFDGPSVPEVRKQ 180
                                     PRPPINGYFTKTT+VD  IEPEFDGP V EV  Q
Sbjct: 121 AASSSRSAISRNPSSYSQIVRLKVFQPRPPINGYFTKTTMVDLTIEPEFDGPFVHEVCNQ 180

Query: 181 IFPHGFNYLPEDLQKTRTYYEFILVDSKSAEITHVPDGNDPSRTIYSKLRIFHILTPSSW 240
           IFPH FN+LPEDL KTRT+YE+ILVDSKSAEITHVPD NDPS+ IYSK RIF +LTPS W
Sbjct: 181 IFPHEFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKFRIFRVLTPSYW 240

Query: 241 KQG-------------------PSGNFKALSKALRIKWWEKFDYSYLESDKMKDWLKTNV 256
           KQG                   PSGNFKALSK+L IKWWEKF+YS+LE +K+KDW K N+
Sbjct: 241 KQGMFVGRKFSHPFKPPSYNYRPSGNFKALSKSLIIKWWEKFNYSHLEVNKIKDWFKANI 300

[Close]

BLAST of Moc02g16070 vs. ExPASy TrEMBL
Match: A0A5A7T975 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002220 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 3.1e-76
Identity = 151/238 (63.45%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 22  RPPSPRNESNISPQTAASSSRAVISKGKRPITQTSVPSPLSAENYAMDIQFETPRPPING 81
           RP  P   +      AASSSR+ I +     +Q   P            +   PRPPING
Sbjct: 46  RPSGPTTPNKRVASPAASSSRSAIPRNPSSYSQIVRP------------KIFQPRPPING 105

Query: 82  YFTKTTLVDSIIEPEFDGPSVPEVRKQIFPHGFNYLPEDLQKTRTYYEFILVDSKSAEIT 141
           YFTKTT+VD  IEPEFDGPSV EV  QIFPHGFN+LPEDL KTRT+YE+ILVDSKSAEIT
Sbjct: 106 YFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEIT 165

Query: 142 HVPDGNDPSRTIYSKLRIFHILTPSSWKQ----GPSGNFKALSKALRIKWWEKFDYSYLE 201
           HVPD NDPS+ IYSKLRIF +LTPS WKQ    GP GNFKALSK+LRIKWWEKF+YS+LE
Sbjct: 166 HVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFLGPLGNFKALSKSLRIKWWEKFNYSHLE 225

Query: 202 SDKMKDWLKTNVHLEDITRQEDESFLLAKNAVISSLAGAESQADFNSVLNTVAVQISD 256
            +K+KDW K N+HL+D+TRQEDE+FLL KNAV+S+L GA +Q +FNSV+N V V +SD
Sbjct: 226 VNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLVGASTQQEFNSVVNNVVVNLSD 271

[Close]

BLAST of Moc02g16070 vs. ExPASy TrEMBL
Match: A0A5A7T5B0 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002250 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.7e-74
Identity = 152/263 (57.79%), Postives = 179/263 (68.06%), Query Frame = 0


Query: 22  RPPSPRNESNISPQTAASSSRAVISKGKRPITQTSVPSPLSAENYAMDIQFETPRPPING 81
           RP  P   +  +   AASSSR+VI +     +Q   P            +   PRPPING
Sbjct: 46  RPSGPTTPNKRAASPAASSSRSVIPRNPSSYSQIVRP------------KIFQPRPPING 105

Query: 82  YFTKTTLVDSIIEPEFDGPSVPEVRKQIFPHGFNYLPEDLQKTRTYYEFILVDSKSAEIT 141
           YFTKTT+VD  IEPEFDGPSV EV  QIFPHGFN+LPEDL KTRT+YE+ILVDSKSAEIT
Sbjct: 106 YFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEIT 165

Query: 142 HVPDGNDPSRTIYSKLRIFHILTPSSWKQ-----------------------------GP 201
           HVPD NDPS+ IYSKLRIF +LTPS WKQ                             GP
Sbjct: 166 HVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHPFKPPSYNYRDYTKAWYILGP 225

Query: 202 SGNFKALSKALRIKWWEKFDYSYLESDKMKDWLKTNVHLEDITRQEDESFLLAKNAVISS 256
            GNFKALSK+LRIKWWEKF+YS+LE +K+KDW K N+HL+D+TRQEDE+FLL KNAV+S+
Sbjct: 226 LGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMST 285

[Close]

BLAST of Moc02g16070 vs. ExPASy TrEMBL
Match: A0A5A7SQU5 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001670 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 6.6e-71
Identity = 179/439 (40.77%), Postives = 210/439 (47.84%), Query Frame = 0


Query: 1   MEPPPGRRRPNSQRPPPQINQRPPSPRNESNISPQTAASSSRAVISKGKRPITQTSVPSP 60
           MEPPP R+RP ++R PP  NQ      N S   PQ+ ASSS    S+ + P +Q+S PSP
Sbjct: 1   MEPPPDRQRPPNERQPPPNNQ-----NNSSLKPPQSVASSSGTTPSRKEFP-SQSSAPSP 60

Query: 61  LSAENYAMDIQFE----------------------------------------------- 120
           +SAENYAMD+QFE                                               
Sbjct: 61  MSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASP 120

Query: 121 -------------------------TPRPPINGYFTKTTLVDSIIEPEFDGPSVPEVRKQ 180
                                     PRPPINGYFTKTT+VD  IEPEFDGPSV EV  Q
Sbjct: 121 GASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 180

Query: 181 IFPHGFNYLPEDLQKTRTYYEFILVDSKSAEITHVPDGNDPSRTIYSKLRIFHILTPSSW 240
           IFPHGFN+LPEDL KTRT+YE+ILVDSKSAEITHVPD NDPS+ IYSKLRIF +LTPS W
Sbjct: 181 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240

Query: 241 KQ---------------------------------------------------------- 256
           KQ                                                          
Sbjct: 241 KQGMFVGRKFSHSFKQPSYNYRDYTKAWYIVFWLHAYNHFWFVTFCKQAYKMHFPNWFQN 300

[Close]

BLAST of Moc02g16070 vs. ExPASy TrEMBL
Match: A0A5D3DX32 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003460 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 6.6e-71
Identity = 179/439 (40.77%), Postives = 210/439 (47.84%), Query Frame = 0


Query: 1   MEPPPGRRRPNSQRPPPQINQRPPSPRNESNISPQTAASSSRAVISKGKRPITQTSVPSP 60
           MEPPP R+RP ++R PP  NQ      N S   PQ+ ASSS    S+ + P +Q+S PSP
Sbjct: 1   MEPPPDRQRPPNERQPPPNNQ-----NNSSLKPPQSVASSSGTTPSRKEFP-SQSSAPSP 60

Query: 61  LSAENYAMDIQFE----------------------------------------------- 120
           +SAENYAMD+QFE                                               
Sbjct: 61  MSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTELLRPSGPTTPNKRAASP 120

Query: 121 -------------------------TPRPPINGYFTKTTLVDSIIEPEFDGPSVPEVRKQ 180
                                     PRPPINGYFTKTT+VD  IEPEFDGPSV EV  Q
Sbjct: 121 GASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQ 180

Query: 181 IFPHGFNYLPEDLQKTRTYYEFILVDSKSAEITHVPDGNDPSRTIYSKLRIFHILTPSSW 240
           IFPHGFN+LPEDL KTRT+YE+ILVDSKSAEITHVPD NDPS+ IYSKLRIF +LTPS W
Sbjct: 181 IFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYW 240

Query: 241 KQ---------------------------------------------------------- 256
           KQ                                                          
Sbjct: 241 KQGMFVGRKFSHSFKQPSYNYRDYTKAWYIVFWLHAYNHFWFVTFCKQAYKMHFPNWFQN 300

The following BLAST results are available for this feature:

BLAST of Moc02g16070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050447.1	1.4e-78	51.16	polyprotein [Cucumis melo var. makuwa]	[more]
KAA0038025.1	6.3e-76	63.45	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0038028.1	7.7e-74	57.79	polyprotein [Cucumis melo var. makuwa]	[more]
TYK28082.1	1.4e-70	40.77	Retrotransposable element Tf2 [Cucumis melo var. makuwa]	[more]
KAA0032918.1	1.4e-70	40.77	Retrotransposable element Tf2 [Cucumis melo var. makuwa]	[more]

BLAST of Moc02g16070 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc02g16070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7T9	6.6e-79	51.16	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00530 PE...	[more]
A0A5A7T975	3.1e-76	63.45	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36...	[more]
A0A5A7T5B0	3.7e-74	57.79	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002250 PE...	[more]
A0A5A7SQU5	6.6e-71	40.77	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3DX32	6.6e-71	40.77	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Moc02g16070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..60
None	No IPR available	PANTHER	PTHR46249	FAMILY NOT NAMED	coord: 68..166
None	No IPR available	PANTHER	PTHR46249:SF31	BNAC08G47480D PROTEIN	coord: 68..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g16070.1	Moc02g16070.1	mRNA