Moc02g15780 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g15780
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ATP synthase gamma chain like
Location	chr2: 11895545 .. 11895868 (+)
RNA-Seq Expression	Moc02g15780
Synteny	Moc02g15780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACTCCGAAAAAGGAAGAAGATGAGGTAACTACTCCTGCCACTTCCTCTGGGTTTATGGGTAAATTGGAACAGAAGTACAGGGAAATCAAAGAGAATGCAGAAACATATCCTTATGTGTGGGGCTCATACATTGTTGTCTATGGTGGTTTTGCTCTTTGGACTGGCTATAGATGGAGGAAGCTGCGCAAGACCGAGGACAGAGTACGTTCGCTACAAGAGAAGCTCCGTCGGCGTTACGAAGCCGAACAATCGGCCAGTTCGGTCGCATCGGTAGAGAAAGATCCACCATCTGTAAAACAGCCTTCTTCCAAGGAGTAG

mRNA sequence

ATGGAAACTCCGAAAAAGGAAGAAGATGAGGTAACTACTCCTGCCACTTCCTCTGGGTTTATGGGTAAATTGGAACAGAAGTACAGGGAAATCAAAGAGAATGCAGAAACATATCCTTATGTGTGGGGCTCATACATTGTTGTCTATGGTGGTTTTGCTCTTTGGACTGGCTATAGATGGAGGAAGCTGCGCAAGACCGAGGACAGAGTACGTTCGCTACAAGAGAAGCTCCGTCGGCGTTACGAAGCCGAACAATCGGCCAGTTCGGTCGCATCGGTAGAGAAAGATCCACCATCTGTAAAACAGCCTTCTTCCAAGGAGTAG

Coding sequence (CDS)

ATGGAAACTCCGAAAAAGGAAGAAGATGAGGTAACTACTCCTGCCACTTCCTCTGGGTTTATGGGTAAATTGGAACAGAAGTACAGGGAAATCAAAGAGAATGCAGAAACATATCCTTATGTGTGGGGCTCATACATTGTTGTCTATGGTGGTTTTGCTCTTTGGACTGGCTATAGATGGAGGAAGCTGCGCAAGACCGAGGACAGAGTACGTTCGCTACAAGAGAAGCTCCGTCGGCGTTACGAAGCCGAACAATCGGCCAGTTCGGTCGCATCGGTAGAGAAAGATCCACCATCTGTAAAACAGCCTTCTTCCAAGGAGTAG

Protein sequence

METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRSLQEKLRRRYEAEQSASSVASVEKDPPSVKQPSSKE

Homology

[Close]

BLAST of Moc02g15780 vs. NCBI nr
Match: XP_022148881.1 (uncharacterized protein LOC111017444 [Momordica charantia])

HSP 1 Score: 208.4 bits (529), Expect = 3.1e-50
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRSLQEKLRRRYEAEQSASSVASVEKDPPSVKQPSSKE 108
           RKLRKTEDRVR LQEKLRRRYEAEQSASSVASVEKDPPSVKQPSSKE
Sbjct: 61  RKLRKTEDRVRXLQEKLRRRYEAEQSASSVASVEKDPPSVKQPSSKE 107

[Close]

BLAST of Moc02g15780 vs. NCBI nr
Match: XP_022948157.1 (uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948158.1 uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948159.1 uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_023534704.1 uncharacterized protein LOC111796195 [Cucurbita pepo subsp. pepo] >XP_023534706.1 uncharacterized protein LOC111796195 [Cucurbita pepo subsp. pepo] >KAG7035292.1 hypothetical protein SDJN02_02087 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.2 bits (435), Expect = 2.5e-39
Identity = 89/111 (80.18%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           MET KKEED +T PA+SSGF+GKLE+KY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRSLQEKLRRRYEAE----QSASSVASVEKDPPSVKQPSSKE 108
           RKLRKTEDRVR+LQEKLR+RYEAE    QSA+SVASVEK   SVKQP S +
Sbjct: 61  RKLRKTEDRVRALQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQPPSNQ 111

[Close]

BLAST of Moc02g15780 vs. NCBI nr
Match: KAG6605336.1 (hypothetical protein SDJN03_02653, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171.8 bits (434), Expect = 3.2e-39
Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           MET KKEED +T PA+SSGF+GKLE+KY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRSLQEKLRRRYEAE----QSASSVASVEKDPPSVKQPSS 106
           RKLRKTEDRVR+LQEKLR+RYEAE    QSA+SVASVEK   SVKQP S
Sbjct: 61  RKLRKTEDRVRALQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQPPS 109

[Close]

BLAST of Moc02g15780 vs. NCBI nr
Match: XP_023007268.1 (uncharacterized protein LOC111499806 [Cucurbita maxima])

HSP 1 Score: 169.1 bits (427), Expect = 2.1e-38
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           ME  KKEED +T PA+SSGF+GKLE+KY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   MEAQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRSLQEKLRRRYEAE----QSASSVASVEKDPPSVKQPSSKE 108
           RKLRKTEDRVR LQEKLR+RYEAE    QSA+SVASVEK   SVKQP S +
Sbjct: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQPPSNQ 111

[Close]

BLAST of Moc02g15780 vs. NCBI nr
Match: XP_038900834.1 (uncharacterized protein LOC120087898 [Benincasa hispida])

HSP 1 Score: 150.6 bits (379), Expect = 7.7e-33
Identity = 78/100 (78.00%), Postives = 88/100 (88.00%), Query Frame = 0


Query: 5   KKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLR 64
           +KEED++   A+S GF+GKLE+KYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLR
Sbjct: 7   EKEEDKLYGVASSIGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLR 66

Query: 65  KTEDRVRSLQEKLRRRYEAEQSAS--SVASVEKDPPSVKQ 103
           KTEDRVR LQEKLR+RYEAEQS++  S  SV K+P S KQ
Sbjct: 67  KTEDRVRVLQEKLRQRYEAEQSSAKQSANSVHKNPSSSKQ 106

[Close]

BLAST of Moc02g15780 vs. ExPASy TrEMBL
Match: A0A6J1D6P5 (uncharacterized protein LOC111017444 OS=Momordica charantia OX=3673 GN=LOC111017444 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.5e-50
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRSLQEKLRRRYEAEQSASSVASVEKDPPSVKQPSSKE 108
           RKLRKTEDRVR LQEKLRRRYEAEQSASSVASVEKDPPSVKQPSSKE
Sbjct: 61  RKLRKTEDRVRXLQEKLRRRYEAEQSASSVASVEKDPPSVKQPSSKE 107

[Close]

BLAST of Moc02g15780 vs. ExPASy TrEMBL
Match: A0A6J1G8F0 (uncharacterized protein LOC111451821 OS=Cucurbita moschata OX=3662 GN=LOC111451821 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39
Identity = 89/111 (80.18%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           MET KKEED +T PA+SSGF+GKLE+KY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRSLQEKLRRRYEAE----QSASSVASVEKDPPSVKQPSSKE 108
           RKLRKTEDRVR+LQEKLR+RYEAE    QSA+SVASVEK   SVKQP S +
Sbjct: 61  RKLRKTEDRVRALQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQPPSNQ 111

[Close]

BLAST of Moc02g15780 vs. ExPASy TrEMBL
Match: A0A6J1L783 (uncharacterized protein LOC111499806 OS=Cucurbita maxima OX=3661 GN=LOC111499806 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.0e-38
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           ME  KKEED +T PA+SSGF+GKLE+KY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   MEAQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRSLQEKLRRRYEAE----QSASSVASVEKDPPSVKQPSSKE 108
           RKLRKTEDRVR LQEKLR+RYEAE    QSA+SVASVEK   SVKQP S +
Sbjct: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQPPSNQ 111

[Close]

BLAST of Moc02g15780 vs. ExPASy TrEMBL
Match: A0A5C7ILW6 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004401 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29
Identity = 66/95 (69.47%), Postives = 82/95 (86.32%), Query Frame = 0


Query: 5   KKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLR 64
           K E+D++TT + ++GF+G ++++YR+ KENAETYPYVW SYIVVYGGFALWT YRWRKLR
Sbjct: 6   KGEDDQLTTSSQAAGFLGMIQEQYRKTKENAETYPYVWASYIVVYGGFALWTTYRWRKLR 65

Query: 65  KTEDRVRSLQEKLRRRYEAEQSASSVASVEKDPPS 100
           KTEDRVR LQE+LR+  E+EQSASS  SV+K PPS
Sbjct: 66  KTEDRVRGLQERLRKLVESEQSASSTGSVQKVPPS 100

[Close]

BLAST of Moc02g15780 vs. ExPASy TrEMBL
Match: A0A6P6G7W4 (uncharacterized protein LOC107421190 OS=Ziziphus jujuba OX=326968 GN=LOC107421190 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.0e-27
Identity = 70/105 (66.67%), Postives = 80/105 (76.19%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           M T    +D+ TT A   G  G LE++YR+IKENAETYPYVW SYIVVYGGFALWT YRW
Sbjct: 1   MATHDGGDDQQTTSAQDVGLRGMLEEQYRKIKENAETYPYVWASYIVVYGGFALWTTYRW 60

Query: 61  RKLRKTEDRVRSLQEKLRRRYEAEQS-ASSVASVEKDPPSVKQPS 105
           RKLRKTEDRVR+LQE+LR+  EAE+S  SS AS EK PP  K+ S
Sbjct: 61  RKLRKTEDRVRTLQERLRKLVEAEESTTSSAASAEKVPPPAKKTS 105

[Close]

BLAST of Moc02g15780 vs. TAIR 10
Match: AT5G09270.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-22
Identity = 53/99 (53.54%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 8   EDEVTTPA-TSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKT 67
           ED+ + P+  + GF+G +E++Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+T
Sbjct: 9   EDQESQPSQVAPGFVGAIEEQYKKLRDHAEAYPYVWGSYTVVYGGLFLWTAYRWRKLRRT 68

Query: 68  EDRVRSLQEKLRRRYEAEQSASSVASVEKDPPSVKQPSS 106
           EDRVR LQ KLR+  E EQ+A    +  K   SV + SS
Sbjct: 69  EDRVRGLQTKLRKLVENEQAA---VTASKSAQSVDKSSS 104

[Close]

BLAST of Moc02g15780 vs. TAIR 10
Match: AT5G09270.2 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-22
Identity = 53/99 (53.54%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 8   EDEVTTPA-TSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKT 67
           ED+ + P+  + GF+G +E++Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+T
Sbjct: 9   EDQESQPSQVAPGFVGAIEEQYKKLRDHAEAYPYVWGSYTVVYGGLFLWTAYRWRKLRRT 68

Query: 68  EDRVRSLQEKLRRRYEAEQSASSVASVEKDPPSVKQPSS 106
           EDRVR LQ KLR+  E EQ+A    +  K   SV + SS
Sbjct: 69  EDRVRGLQTKLRKLVENEQAA---VTASKSAQSVDKSSS 104

The following BLAST results are available for this feature:

BLAST of Moc02g15780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148881.1	3.1e-50	99.07	uncharacterized protein LOC111017444 [Momordica charantia]	[more]
XP_022948157.1	2.5e-39	80.18	uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948158.1 unchar...	[more]
KAG6605336.1	3.2e-39	81.65	hypothetical protein SDJN03_02653, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023007268.1	2.1e-38	79.28	uncharacterized protein LOC111499806 [Cucurbita maxima]	[more]
XP_038900834.1	7.7e-33	78.00	uncharacterized protein LOC120087898 [Benincasa hispida]	[more]

BLAST of Moc02g15780 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc02g15780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6P5	1.5e-50	99.07	uncharacterized protein LOC111017444 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1G8F0	1.2e-39	80.18	uncharacterized protein LOC111451821 OS=Cucurbita moschata OX=3662 GN=LOC1114518...	[more]
A0A6J1L783	1.0e-38	79.28	uncharacterized protein LOC111499806 OS=Cucurbita maxima OX=3661 GN=LOC111499806...	[more]
A0A5C7ILW6	1.5e-29	69.47	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004401 PE=4 SV=1	[more]
A0A6P6G7W4	4.0e-27	66.67	uncharacterized protein LOC107421190 OS=Ziziphus jujuba OX=326968 GN=LOC10742119...	[more]

BLAST of Moc02g15780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09270.1	1.7e-22	53.54	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT5G09270.2	1.7e-22	53.54	unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..107
None	No IPR available	PANTHER	PTHR36794	TRANSMEMBRANE PROTEIN	coord: 5..104
None	No IPR available	PANTHER	PTHR36794:SF1	TRANSMEMBRANE PROTEIN	coord: 5..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g15780.1	Moc02g15780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane