Moc02g15620 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc02g15620
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr2: 11760723 .. 11763313 (+)
RNA-Seq ExpressionMoc02g15620
SyntenyMoc02g15620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGAAGAACTGAAAACCAAATGGCCTATGAAATCGCACAGAAAGCATGCTCTTCGGGTTCTCAGCAAGTTGGAGAGTTTATTACCCTTCGTGGCTTTTACCTTTTATTTCTTCTGATATTTTAGTTTCTATTTAATACTTGCATTCCTTTCTTTTTTAAAAAAGTAAATTATAGTTCATTTCATTTATCAATTCTCTGTAAGTTGTTCAATTTCATTATATATATTATTATTAAAATATATTTTTTAAAATTTGAATTGGCCTCTTTATAATTGTTAGTGGCCCGCTACCAAAAAATTTCTCCCTCAAGTTTATGGGTGGTTACGTGGTTGGTTTTAAAATCATTTTTCCATCTTATTCTTCTCGTTGGAAGAAGAATTTACAAAGAGAATTTTTACAGAAAATTTAAGGTCTCTGGCCCAACAAAGAAGCATGTGTTTTTCATCAAGTCACAGATTAAAACATTGGATAGACTAGCAACTGTGTGATCTTTTTAAATTGATTTTCAAATTTGATTGTTATGGCCGGAGGTATGTAATCTTTAATTTTTATGTATCAAAGCCAGGTTAATTATTCTTATGTTTTTAAGATATTTTACTATTTTTAATTTATTGAAATGACATCATTATTTGTAATTGAATATAAAATTTAAATTAATTTTCTCCACATAGAAAAATTATTTTTATTTTTATATTGGATTAAAATGAGACAATATTTGGTTTATTACGATAAGAATGTATATATTTTTGGGAATTTTAGTAGCCCACAACCCTAAAATATATTTTTGGTATAATAAATATTAGTCTCATGTTGAAATATATTTGAATGTTATAATTTTTGCCTACGTAAATTATAAAATTCAATTATTTGATTATTGAATTAGTTTACATGGGTAGATTTTACATACTTTATTTACTTCATTACAGTTCGTAAGCTTGTGTTTATTTATTCGTAAGCTTGTGTTTATTTATTTATTTTGCAGTTCAATCTTTAGTTCTTTCTAATTCTGAATCATCTCGTATCCCATTTATAAGTGGTGATGATTTTAAGGACTGGAAAGAGAAAGTTCTCTTTACATTAGGGTGCATGGACCTTGACTTGACATTACGTATTGATGAACCACCAATATCTATAGAATTAAGTACCCAAAATGAGAAAGCAGCATATGGACCTTTTAAAATTTCATATAACACACATAAGGAAAAATGGTCAATCAATGAATTTTTGACCTTGTGTGTTCAAGAAGAAGGAAGGTTAAAACAGAAAAAGGTTGAATGTGCACATGTGGCAACTCATGGTAAGAAAGTTGTCAACAAGGGGAAAGGAAAGACATCTCTTAATCAAGTTAATAAGGGTGCATTCATGTGTTTTTCTGCAAAAAGAAGGGACACATGAAGAAAGATTGCCCAAAATACATAAAGTGGCTTGAAAAGAATGGTACTCTCATCTCTTATGTTTATTATGAATCTAATATGTGTGAAATTTCTCATAATACATGGTGGATTGACTTTGGTTCTACAATTCATATTGCTAATACCATGCAGGGCTTCCTAAGCCAATGAAAACCAACGCAAAGTGAATCTCTCATCTATTCAGGCAACAAGATGAGCTCACATGTGGAAGCTGTTGGAACCTGTCATGTTGTTCTATCTACTAGTTTTGTTTTGGACCTTGAAAAAACGTTTCATATTCCTACATTTTCCAAAAAACTAATATGAGTTTCTAAACTTTTACCTTGTGAATATGTCCTTAACTTTTGTGGTAGTTCGTTTAATCTTTTCAAAGACAATGTTGTTGTTGGTTATGGTTCTTTATTTAATGGTCTTTTCAAACTTCACTTAAATTCTACCTTCGATTACAACCTTATGGCTATGTGTTACAAGGGCGAATTTCGGAATATAAGTGCCTTGGTGGACTGGACCAAGGCCATGAGCAACGACAGTGATGATGGATCAGCATGTGACGAAATTGGTGATCGAAGCCAAGGTTGCACGATATTTCAGGCATGCAGGGTATAAGTTGCAGACACTGGGCGTAGGTGGACATTCAGAGGAGTATCGAAGATCGTTTTCGAATATGCATAGTTGGTCCACTTCGCTTACGGGAGACTAACATCGGGAGTGGGTGAGTAGTGAGCACACGAGAGCATGTGCATGACATCGAGATAACATGTGCGATATGCAGATGGGCGGCTGGAGAATGGCTAGCGGCCCAAGACATGTGGGTAGCATGTGGTCAAACGGGTGGACAAATGGTCGATGCGTGTAGGCGGGCACGCACGGTTGTCCGAGGCTCATGCAAGCGAGCGGACATGCATAGGTGAACACATGTTAGGCCGAACACGCAGGCAGATGTCTAAGGAGGCAGACACGCGTAGGTGGGCGCGAGCCCCGCAAGCGCGACATGGTAAGCGCACGCAGGTGCGCACGCGCCCTAGGCAGGCGGGTGGCTCGGCGCACACGAGTGGCGAGCGACCAAGAGGACATGCGCGCGCACACAGTGAGCGCAAATGCGCGCAGATTGGCCTGGACTCTTGTAGGTGGTCACAAGGCTATGGGGCGTTTTTATACAAGGCGTGGTGGACTTAG

mRNA sequence

ATGTTGGAAGAACTGAAAACCAAATGGCCTATGAAATCGCACAGAAAGCATGCTCTTCGGGTTCTCAGCAAGTTGGAGATTCAATCTTTAGTTCTTTCTAATTCTGAATCATCTCGTATCCCATTTATAAGTGGTGATGATTTTAAGGACTGGAAAGAGAAAGTTCTCTTTACATTAGGGTGCATGGACCTTGACTTGACATTACGTATTGATGAACCACCAATATCTATAGAATTAAGTACCCAAAATGAGAAAGCAGCATATGGACCTTTTAAAATTTCATATAACACACATAAGGAAAAATGGTCAATCAATGAATTTTTGACCTTGTGTGTTCAAGAAGAAGGAAGGTTAAAACAGAAAAAGGTTGAATGTGCACATGTGGCAACTCATGGCAACAAGATGAGCTCACATGTGGAAGCTGTTGGAACCTGTCATGTTGTTCTATCTACTAGTTTTGTTTTGGACCTTGAAAAAACTTCGTTTAATCTTTTCAAAGACAATGTTGTTGTTGGTTATGGTTCTTTATTTAATGGTCTTTTCAAACTTCACTTAAATTCTACCTTCGATTACAACCTTATGGCTATGTGTTACAAGGGCGAATTTCGGAATATAAGTGCCTTGGTGGACTGGACCAAGGCCATGAGCAACGACAGTGATGATGGATCAGCATGTGACGAAATTGGTGATCGAAGCCAAGGCGGGCACGCACGGTTGTCCGAGGCTCATGCAAGCGAGCGGACATGCATAGGTGAACACATGTTAGGCCGAACACGCAGGCAGATGTCTAAGGAGGCAGACACGCGTAGGTGGGCGCGAGCCCCGCAAGCGCGACATGGTAAGCGCACGCAGGTGCGCACGCGCCCTAGGCAGGCGGGTGGCTCGGCGCACACGAGTGGCGAGCGACCAAGAGGACATGCGCGCGCACACAGTGAGCGCAAATGCGCGCAGATTGGCCTGGACTCTTGTAGGTGGTCACAAGGCTATGGGGCGTTTTTATACAAGGCGTGGTGGACTTAG

Coding sequence (CDS)

ATGTTGGAAGAACTGAAAACCAAATGGCCTATGAAATCGCACAGAAAGCATGCTCTTCGGGTTCTCAGCAAGTTGGAGATTCAATCTTTAGTTCTTTCTAATTCTGAATCATCTCGTATCCCATTTATAAGTGGTGATGATTTTAAGGACTGGAAAGAGAAAGTTCTCTTTACATTAGGGTGCATGGACCTTGACTTGACATTACGTATTGATGAACCACCAATATCTATAGAATTAAGTACCCAAAATGAGAAAGCAGCATATGGACCTTTTAAAATTTCATATAACACACATAAGGAAAAATGGTCAATCAATGAATTTTTGACCTTGTGTGTTCAAGAAGAAGGAAGGTTAAAACAGAAAAAGGTTGAATGTGCACATGTGGCAACTCATGGCAACAAGATGAGCTCACATGTGGAAGCTGTTGGAACCTGTCATGTTGTTCTATCTACTAGTTTTGTTTTGGACCTTGAAAAAACTTCGTTTAATCTTTTCAAAGACAATGTTGTTGTTGGTTATGGTTCTTTATTTAATGGTCTTTTCAAACTTCACTTAAATTCTACCTTCGATTACAACCTTATGGCTATGTGTTACAAGGGCGAATTTCGGAATATAAGTGCCTTGGTGGACTGGACCAAGGCCATGAGCAACGACAGTGATGATGGATCAGCATGTGACGAAATTGGTGATCGAAGCCAAGGCGGGCACGCACGGTTGTCCGAGGCTCATGCAAGCGAGCGGACATGCATAGGTGAACACATGTTAGGCCGAACACGCAGGCAGATGTCTAAGGAGGCAGACACGCGTAGGTGGGCGCGAGCCCCGCAAGCGCGACATGGTAAGCGCACGCAGGTGCGCACGCGCCCTAGGCAGGCGGGTGGCTCGGCGCACACGAGTGGCGAGCGACCAAGAGGACATGCGCGCGCACACAGTGAGCGCAAATGCGCGCAGATTGGCCTGGACTCTTGTAGGTGGTCACAAGGCTATGGGGCGTTTTTATACAAGGCGTGGTGGACTTAG

Protein sequence

MLEELKTKWPMKSHRKHALRVLSKLEIQSLVLSNSESSRIPFISGDDFKDWKEKVLFTLGCMDLDLTLRIDEPPISIELSTQNEKAAYGPFKISYNTHKEKWSINEFLTLCVQEEGRLKQKKVECAHVATHGNKMSSHVEAVGTCHVVLSTSFVLDLEKTSFNLFKDNVVVGYGSLFNGLFKLHLNSTFDYNLMAMCYKGEFRNISALVDWTKAMSNDSDDGSACDEIGDRSQGGHARLSEAHASERTCIGEHMLGRTRRQMSKEADTRRWARAPQARHGKRTQVRTRPRQAGGSAHTSGERPRGHARAHSERKCAQIGLDSCRWSQGYGAFLYKAWWT
Homology
BLAST of Moc02g15620 vs. NCBI nr
Match: KAF7820704.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora])

HSP 1 Score: 115.9 bits (289), Expect = 6.7e-22
Identity = 79/270 (29.26%), Postives = 112/270 (41.48%), Query Frame = 0

Query: 34  NSESSRIPFISGDDFKDWKEKVLFTLGCMDLDLTLRIDEPPISIELSTQNE--------- 93
           N    ++P + GD+++ WKE ++  LG MD+D  +R DEPP   + S ++E         
Sbjct: 9   NISDFQVPELDGDNYRLWKENIILQLGWMDVDYAIRKDEPPALTDTSNKSEIDLYERWER 68

Query: 94  ---------------------------KAAYGPFKISYNTHKEKWSINEFLTLCVQEEGR 153
                                         YGPFKISYNTHK+KWSINE LT+CVQEE R
Sbjct: 69  SNRLTQLKTLEVELPDSFLVYSILNSLPPQYGPFKISYNTHKQKWSINEVLTMCVQEEER 128

Query: 154 LKQKKVECAHVATH---------------------------------------------G 195
           L ++  E AH+A                                               G
Sbjct: 129 LLEEMGESAHLANQGKDKNQDVSSNIWWIDSGATIHISNTLQDFLNQRKPTSSEQYIYSG 188

BLAST of Moc02g15620 vs. NCBI nr
Match: XP_028077677.1 (uncharacterized protein LOC114279602 [Camellia sinensis])

HSP 1 Score: 103.6 bits (257), Expect = 3.4e-18
Identity = 74/223 (33.18%), Postives = 91/223 (40.81%), Query Frame = 0

Query: 16  KHALRVLSKLEIQSLVLSNSESSRIPFISGDDFKDWKEKVLFTLGCMDLDLTLRIDEPPI 75
           K  +  L  + I + VLSN ESSRIPF++GD+F DWK+K+L TLGCMDLDL L +DEPP 
Sbjct: 56  KALIMFLVIVAIFTSVLSN-ESSRIPFLNGDNFSDWKDKILLTLGCMDLDLALCVDEPPE 115

Query: 76  SIELSTQNEKAA------------------------------------------------ 132
           S + S+  EK+A                                                
Sbjct: 116 STDESSAAEKSAYDKWERSNRLSLMLIKSHISQSIKGSIPPSDNVKNYMKAIEEQFVSSD 175

BLAST of Moc02g15620 vs. NCBI nr
Match: XP_028114160.1 (uncharacterized protein LOC114312148 [Camellia sinensis])

HSP 1 Score: 103.6 bits (257), Expect = 3.4e-18
Identity = 72/213 (33.80%), Postives = 86/213 (40.38%), Query Frame = 0

Query: 26  EIQSLVLSNSESSRIPFISGDDFKDWKEKVLFTLGCMDLDLTLRIDEPPISIELSTQNEK 85
           EI + VLSN ESSRIPF++GD+F +WK+K+L TLGCMDLDL LR+DEPP   + S+  EK
Sbjct: 52  EISTSVLSN-ESSRIPFLNGDNFSNWKDKILLTLGCMDLDLALRVDEPPEPTDESSAAEK 111

Query: 86  AAYG-------------------------------------------------------- 132
           +AY                                                         
Sbjct: 112 SAYDKWERSNRLSLMLIKSHISQSIRGLIPPSDKVKNYMRAIEEQFVSSDKALASTLMNK 171

BLAST of Moc02g15620 vs. NCBI nr
Match: KAF7844933.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora])

HSP 1 Score: 103.2 bits (256), Expect = 4.5e-18
Identity = 80/310 (25.81%), Postives = 113/310 (36.45%), Query Frame = 0

Query: 34  NSESSRIPFISGDDFKDWKEKVLFTLGCMDLDLTLRIDEPPISIELSTQNE--------- 93
           N    ++P + GD+++ WK+K++  LG MD+D  +R DEPP   + S ++E         
Sbjct: 9   NISDFQVPELDGDNYRLWKQKIILQLGWMDVDYAIRKDEPPALTDTSNKSEIDLYERWER 68

Query: 94  ------------------------------------------------------------ 153
                                                                       
Sbjct: 69  SNRLSMMYIKSKISASIRGSLGVHKNVRDLLKAIDEQFESSEKALATQLKTLEVELPDSF 128

Query: 154 ---------KAAYGPFKISYNTHKEKWSINEFLTLCVQEEGRLKQKKVECAHVATH---- 195
                       YGPFKISYNTHK+KWSINE LT+CVQEEGRL  +  E AH+A      
Sbjct: 129 LVYSILNSLPPQYGPFKISYNTHKQKWSINEVLTMCVQEEGRLLAEMGESAHLANQGKKG 188

BLAST of Moc02g15620 vs. NCBI nr
Match: XP_026409833.1 (uncharacterized protein LOC113304928 [Papaver somniferum])

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-17
Identity = 67/207 (32.37%), Postives = 79/207 (38.16%), Query Frame = 0

Query: 33  SNSESSRIPFISGDDFKDWKEKVLFTLGCMDLDLTLRIDEPPISIELSTQNEKAAY---- 92
           SN  SSRIP ++GD++K+WKEK+L  LGCMDLDL +R DEPPI I   T  EKAAY    
Sbjct: 6   SNDSSSRIPILNGDNYKEWKEKILLYLGCMDLDLAIREDEPPIVIATGTHAEKAAYERWE 65

Query: 93  ------------------------------------------------------------ 133
                                                                       
Sbjct: 66  RSNRLSLMLIKSHIHKSIKGSIPERHNVKDYLQAIEEQFSTSDKVLAGTLMKKLSSMRYN 125

BLAST of Moc02g15620 vs. ExPASy TrEMBL
Match: A0A1S4D9I0 (uncharacterized protein LOC107827472 OS=Nicotiana tabacum OX=4097 GN=LOC107827472 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.0e-17
Identity = 62/186 (33.33%), Postives = 78/186 (41.94%), Query Frame = 0

Query: 37  SSRIPFISGDDFKDWKEKVLFTLGCMDLDLTLRIDEPPISIELSTQNEK----------- 96
           ++RIP +SGD++ +WKEKVL TLGC DLDL LR+DEPPI  + ST   K           
Sbjct: 11  NARIPMLSGDNYTEWKEKVLLTLGCSDLDLALRVDEPPIPSKSSTPAAKADYERDKVKTY 70

Query: 97  ------------------------------------------------------------ 143
                                                                       
Sbjct: 71  MKAIDEQFVSSDKALASTLMKRLSSMTFGRSRTVSEHIMEMKDIAAKLKSIEVDMSEPFL 130

BLAST of Moc02g15620 vs. ExPASy TrEMBL
Match: A0A2N9GUX4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31267 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.0e-17
Identity = 75/247 (30.36%), Postives = 101/247 (40.89%), Query Frame = 0

Query: 38  SRIPFISGDDFKDWKEKVLFTLGCMDLDLTLRIDEPPISIELSTQNEKA----------- 97
           S IP + GD++K WKE+VL  LG MD+D  +R DEPP   + ST  + A           
Sbjct: 15  SDIPELKGDNYKIWKERVLLHLGWMDIDYAIRKDEPPALTDTSTAADIALYERWERSNRL 74

Query: 98  -------------------------------------------------------AYGPF 157
                                                                   YGPF
Sbjct: 75  SMMFIKTRISAGSPSVRGVREHIMQIRDIVAQLKKLEVEMSESFLVHYILNTLPHQYGPF 134

Query: 158 KISYNTHKEKWSINEFLTLCVQEEGRLKQKKVECAHVATHGNKMSSHVEAVGTCHVVLST 195
           KISYNTHK+KWSINE +T+CVQEEGRL  ++ E A +ATHG K  S     G   +   T
Sbjct: 135 KISYNTHKDKWSINELMTMCVQEEGRLVMEQGESAMLATHG-KGKSQANQKGKGKMPPQT 194

BLAST of Moc02g15620 vs. ExPASy TrEMBL
Match: A5BQE2 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_000235 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.6e-16
Identity = 62/198 (31.31%), Postives = 96/198 (48.48%), Query Frame = 0

Query: 43  ISGDDFKDWKEKVLFTLGCMDLDLTLRIDEPPIS-------------------------- 102
           + GD++K W E++L  LGCMD+D  +R D+P I+                          
Sbjct: 22  LKGDNYKVWNERILLHLGCMDIDYVIRKDKPTITDTSTTAKKALYEQWDRSNRLSVMFIK 81

Query: 103 ------IELSTQNEKAAYGPFKISYNTHKEKWSINEFLTLCVQEEGRLKQKKVECAHVAT 162
                 I+ S       YG FKIS NT+K++WSINE LT+CVQ++GRLK +  E A +AT
Sbjct: 82  TKISYGIQGSVNQHNNQYGSFKISSNTNKDEWSINELLTMCVQKKGRLKMELGESALMAT 141

Query: 163 HGNK--------------MSSHVEAVGTCHVVLSTSFVLDLEKTSFNLFKDNVVVGYGSL 195
            G                + S  +++ +   V+   +     +TSF+LF  + +VG G+L
Sbjct: 142 KGKDHNQAKKKRKEKAFYIPSFSKSLISVSRVVPLGYSFSFYETSFSLFYKSNLVGNGTL 201

BLAST of Moc02g15620 vs. ExPASy TrEMBL
Match: A0A6P8C9H4 (uncharacterized protein LOC116194814 OS=Punica granatum OX=22663 GN=LOC116194814 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-16
Identity = 58/162 (35.80%), Postives = 71/162 (43.83%), Query Frame = 0

Query: 40  IPFISGDDFKDWKEKVLFTLGCMDLDLTLRIDEP--PISIEL------------------ 99
           +P + G +F DWKE VLFTLG MDLD  L  +EP  P  I++                  
Sbjct: 27  VPILDGQNFSDWKESVLFTLGYMDLDYVLHEEEPLAPTDIDMLGVKEKYEWWEKFNRLSL 86

Query: 100 --------------------------------------------------STQNEKAAYG 132
                                                             +  N KA YG
Sbjct: 87  VLMKSRVNKSIQGAVGEVTKVKDFLKAIKEQFAKSDKTLASTLMKRLTSKTFDNSKAEYG 146

BLAST of Moc02g15620 vs. ExPASy TrEMBL
Match: A0A1U7VKT7 (uncharacterized protein LOC104218222 OS=Nicotiana sylvestris OX=4096 GN=LOC104218222 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-15
Identity = 59/196 (30.10%), Postives = 82/196 (41.84%), Query Frame = 0

Query: 35  SESSRIPFISGDDFKDWKEKVLFTLGCMDLDLTLRIDEPPISIELSTQNEK--------- 94
           +E+++IP +SG+++ +W++KVL TLGC DLDL L +DEPPI  E ST   K         
Sbjct: 14  NENAQIPMLSGNNYAEWEDKVLLTLGCSDLDLALSVDEPPIPTESSTPAAKANYECIRDS 73

Query: 95  ------------------------------------------------------------ 143
                                                                       
Sbjct: 74  IPNSVKVKAYMKAIDEQFVSFYKALASTLMKRLSSMTFDRSRTVREHIMEMRDIAAKLKS 133

BLAST of Moc02g15620 vs. TAIR 10
Match: AT5G53670.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 1.0e-04
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 0

Query: 32 LSNSESSRIPFISGDDFKDWKEKVLFTLGCMDLDLTLRIDEPPISIEL 80
          LSN +S  IP +SG +F +WKE +L  L  MDLDL+L  + P    EL
Sbjct: 32 LSNVDS--IPMLSGSNFSEWKEHLLLVLALMDLDLSLMTERPSSPKEL 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF7820704.16.7e-2229.26Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora][more]
XP_028077677.13.4e-1833.18uncharacterized protein LOC114279602 [Camellia sinensis][more]
XP_028114160.13.4e-1833.80uncharacterized protein LOC114312148 [Camellia sinensis][more]
KAF7844933.14.5e-1825.81Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora][more]
XP_026409833.12.2e-1732.37uncharacterized protein LOC113304928 [Papaver somniferum][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S4D9I07.0e-1733.33uncharacterized protein LOC107827472 OS=Nicotiana tabacum OX=4097 GN=LOC10782747... [more]
A0A2N9GUX47.0e-1730.36Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31267 PE=4 SV=1[more]
A5BQE22.6e-1631.31Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI... [more]
A0A6P8C9H44.5e-1635.80uncharacterized protein LOC116194814 OS=Punica granatum OX=22663 GN=LOC116194814... [more]
A0A1U7VKT71.0e-1530.10uncharacterized protein LOC104218222 OS=Nicotiana sylvestris OX=4096 GN=LOC10421... [more]
Match NameE-valueIdentityDescription
AT5G53670.11.0e-0447.92unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..242
NoneNo IPR availablePANTHERPTHR35317:SF3TRANSMEMBRANE PROTEINcoord: 87..134
coord: 39..87
NoneNo IPR availablePANTHERPTHR35317OS04G0629600 PROTEINcoord: 87..134
coord: 39..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc02g15620.1Moc02g15620.1mRNA