Moc02g13980 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc02g13980
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionzinc finger CCCH domain-containing protein 62
Locationchr2: 10305394 .. 10308451 (-)
RNA-Seq ExpressionMoc02g13980
SyntenyMoc02g13980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGACAGGGGAAACAAGCGAAGTTTCATTTGCATCTCATCGTCGTCAGACGACGACGACGACGAGGACGAGGTCTCCTGTGGCGACGACGAAGAGGAATCAGATGAGCAGTATGATGAAGAAGACGATGACGAAGGGGAATCGGAAGAGGAGTACGATAATGAGGGCAGCGACGACGATTGTGACGACGTTCTCTCCGAGCGAGTTATCCGATTTCTAAAAGGTAATGTCAGATCGTTTCTTCTAATTCCTTTAATCAATCGTCATCGTATTAGAATTTGAGTCCACTCCAGAAGCGTCAATTTAGAAAACTGAATCGATGACTGGAACGATGATTTTCGGTCATTATTGGAATCCATCTGTTCAAGTTTGCTAAAGGTTTGTTGATTAATTCGTATGATATTTGATTTCTCAGAGGACGAGTAAAGAATTTGATTTTCAAAGAAGTCATTTATAAGCCTTAATCCATCCTTGCCTGTTTTCTATTGTGCTCTGTCGCAGAGAATAAAAATTTGGATTCATTGACACTTAAAGACTGCAAAGCTTATTTACGGGAGAATGGGTTGAGAATAGCAGGGACTAAATCCGTCTGTATTCAAAGAATCAGGGAGCATTGGAGGTACGTGGATTCATAATCTTGAGAGTCTGAGACTCAAGATCAAGATCGCCAATATTGCGTCTATCTATATCTAGTGCGGTTGCTGAAATATTTGAAATTGTTAGTACTTGTTCATGTTGGTAATCTGCCAGATAATCATCTATGTTGGTTTATTAACCTCTATGGAACTCTTTTTATATATTGAAATGTCCCAGTCAATGTTGGTCGATATCCTTTATAATCCTCTAGACTACAGTAGATGGAAAATTGAAGATTTTTGAGATAAATGGTATGTTGAGAAATTTTCACATCCATTTATGGATTGTTTCTCTTTCCTTGCCCCTTGAAGGTTTTTGAAATCTATAACTTCAAGTTATGCATTCAAAGCATATCAAATTGAAAGGAAGCAACATAATTTGAGCTTGTGCCTTTTTTTTCCCCTCCCCTTTCAGTACTTAGTTTACATTTATTACCCACAAAGTTCTTGTTTAATTGATCGTAATGCTATGAATTCGTTCTTGCTATTTTCTTTTTGGGTCTCTGCAAAGTTGCATTATTATGTAAAACTTCTTTGCTTGTTAATTTTTTCTTCTCAGGATGAAAGATGAAAATGGTGAAGCACAGTATCCAAGGTCATCCTTTGTTGTCAATTGCACTGGTAATCTCTTTGTTCATTTGTCATAGCATTTTCACTCTTCTTTGGTCCCTTTACTGGGTATAATCATTCAAGTGAAACATTAAATGCAGGTGATGTTTGTAGGGGAGATGTTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTACCCAAACAACTTACCCTTCCACCACTATTCTTGTGTGCGATATTTTTGACCAGATTCCTAATTCTTGTAAATTTTTTTAATAGGTTTGATAAAGTAACTAGGCATGGAGGGCTTATAGGAAAGAGAACTGTAGCAGGGAGAGTAGTTAAGGAGAGCTATGGTGCAACCAAACAGCAGCATACTTTTACAGTAAGGTTGCTTTATCTGGTCTAGTAATTCTTTTTCTCGTCGATATTTCTACTTCCAATTGGTTATGAATTTTCAGCCACATTTTTTTTTAAATTGGATAATTTATTTATATATAACATTCACCACAATGATTTAAGTGGTAGCAATGAGTAACAAATGAACTCATGCATTTTGCCTTTCTTTGTTCCTTTGCTTTTCTATTCATTACATATATATTTTCTTTTGTGACTAATGTTTTCCTGTTACTTGGGATTGTACTGTGCTAGGTCGAAGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTCGTGAAGGGTCGAAATCTATATAAACTAAGAACTTTTAGACAGGTAAGTTCTCATTGTATTTAAAATCATTTTCATACAAAGCATGTGGGATAGGAGGATTTGACCCATGGATGAAAACTTTAATTCAAATTGATTTTGTCAACTGTGCCATTGTTGAAGTGTATGTAACTATGAAATTAGTAACAATGTTACTGTGTCTTACATTCTCAAATCTCAAGTATGGAATGAGTGAGTGTTCCAACATTTCCAAATTTATATGAAAGGGCTAGCTCTACAAACATGAAATCATTAAAGTTAGTATTAGTCAGGTCTGGTTGATAAACGACAAATGTGACCTAATGAAGTTTGCAGGTGAGTTTCATATCCAATTAGATACATTTCATTGGATTTTGGTGGAATTTATTGAGATATCAAGTAATTTAGTTCTTAAACTTTTAGGCTTGTGTCTAATAGATCCCTGAAATTTAAAATCATTGAATAGGTTCCTGAAATTTTGTGGGGGAGGAAAGGGGGTCGTACACAAAAGTGAAAGTTTAAGGATCTCTCGGAAAATTTTATAAGTTTTGGACAGCTTAAAAGTTTAGAAATCTATTAGACACAAAATTTAAGTTTAGGATTTAGAAGACATTTTTTTAAACTTCAGAGACCTAAACGCAAACTTAAAACTGTTGGGACTACCTTTGTAATTTAACCTATATCGTTTTAGCCATGAGGTTTGATGAAGAACTTGTGCTTGCTTCTCTTCCCTATTTTAGGTCTCACCTATTTTATGTGTATGTTCTGCTCCCCCTCTCTTTAGCTTTGGAATGATGAAGCAGAAAGACTTCAAGTTCTTGCCGAAAAGCACAAAAGAGGTGCGGCTGCTCGGAGTTTACGAGCAATGCGGACAAGGAAAATAAATTTTCTTCAAACAGAAGGTAAAGTTTCCACCCCCACCCCCACCCCCCATATAAAGAAAATAAGCTTGCTTTAATGGAAGAAGAGAAGATTGAATGTTACCATCTTTTTCCCTTGTAACTATTAGGAGGTGTAAAAAATCAAAGACATTTCCATCCTGCAAGACAAACCTTGAACAGTAAAGAGAGCAGCAAGAGGATGCAGTCAAAGGGCAAGAACAAGGTTCTACGTAGACATCCAACATAG

mRNA sequence

ATGACTGACAGGGGAAACAAGCGAAGTTTCATTTGCATCTCATCGTCGTCAGACGACGACGACGACGAGGACGAGGTCTCCTGTGGCGACGACGAAGAGGAATCAGATGAGCAGTATGATGAAGAAGACGATGACGAAGGGGAATCGGAAGAGGAGTACGATAATGAGGGCAGCGACGACGATTGTGACGACGTTCTCTCCGAGCGAGTTATCCGATTTCTAAAAGAGAATAAAAATTTGGATTCATTGACACTTAAAGACTGCAAAGCTTATTTACGGGAGAATGGGTTGAGAATAGCAGGGACTAAATCCGTCTGTATTCAAAGAATCAGGGAGCATTGGAGGATGAAAGATGAAAATGGTGAAGCACAGTATCCAAGGTCATCCTTTGTTGTCAATTGCACTGGTGATGTTTGTAGGGGAGATGTTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCATGGAGGGCTTATAGGAAAGAGAACTGTAGCAGGGAGAGTAGTTAAGGAGAGCTATGGTGCAACCAAACAGCAGCATACTTTTACAGTCGAAGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTCGTGAAGGGTCGAAATCTATATAAACTAAGAACTTTTAGACAGCTTTGGAATGATGAAGCAGAAAGACTTCAAGTTCTTGCCGAAAAGCACAAAAGAGGTGCGGCTGCTCGGAGTTTACGAGCAATGCGGACAAGGAAAATAAATTTTCTTCAAACAGAAGGAGGTGTAAAAAATCAAAGACATTTCCATCCTGCAAGACAAACCTTGAACAGTAAAGAGAGCAGCAAGAGGATGCAGTCAAAGGGCAAGAACAAGGTTCTACGTAGACATCCAACATAG

Coding sequence (CDS)

ATGACTGACAGGGGAAACAAGCGAAGTTTCATTTGCATCTCATCGTCGTCAGACGACGACGACGACGAGGACGAGGTCTCCTGTGGCGACGACGAAGAGGAATCAGATGAGCAGTATGATGAAGAAGACGATGACGAAGGGGAATCGGAAGAGGAGTACGATAATGAGGGCAGCGACGACGATTGTGACGACGTTCTCTCCGAGCGAGTTATCCGATTTCTAAAAGAGAATAAAAATTTGGATTCATTGACACTTAAAGACTGCAAAGCTTATTTACGGGAGAATGGGTTGAGAATAGCAGGGACTAAATCCGTCTGTATTCAAAGAATCAGGGAGCATTGGAGGATGAAAGATGAAAATGGTGAAGCACAGTATCCAAGGTCATCCTTTGTTGTCAATTGCACTGGTGATGTTTGTAGGGGAGATGTTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCATGGAGGGCTTATAGGAAAGAGAACTGTAGCAGGGAGAGTAGTTAAGGAGAGCTATGGTGCAACCAAACAGCAGCATACTTTTACAGTCGAAGTTTTATGGAGCAGGGGAGTTAGGAAATTACCCCCACTTTATCCTCTGCTCGTGAAGGGTCGAAATCTATATAAACTAAGAACTTTTAGACAGCTTTGGAATGATGAAGCAGAAAGACTTCAAGTTCTTGCCGAAAAGCACAAAAGAGGTGCGGCTGCTCGGAGTTTACGAGCAATGCGGACAAGGAAAATAAATTTTCTTCAAACAGAAGGAGGTGTAAAAAATCAAAGACATTTCCATCCTGCAAGACAAACCTTGAACAGTAAAGAGAGCAGCAAGAGGATGCAGTCAAAGGGCAAGAACAAGGTTCTACGTAGACATCCAACATAG

Protein sequence

MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT
Homology
BLAST of Moc02g13980 vs. NCBI nr
Match: XP_022158231.1 (zinc finger CCCH domain-containing protein 62 [Momordica charantia])

HSP 1 Score: 575.1 bits (1481), Expect = 3.5e-160
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0

Query: 1   MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
           MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD
Sbjct: 1   MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60

Query: 61  DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
           DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN
Sbjct: 61  DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120

Query: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
           GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA
Sbjct: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180

Query: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
           TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG
Sbjct: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240

Query: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT 300
           AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT
Sbjct: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT 299

BLAST of Moc02g13980 vs. NCBI nr
Match: XP_038902878.1 (zinc finger CCCH domain-containing protein 62-like [Benincasa hispida])

HSP 1 Score: 435.3 bits (1118), Expect = 4.4e-118
Identity = 239/315 (75.87%), Postives = 257/315 (81.59%), Query Frame = 0

Query: 4   RGNKRSFICISSSSDDDDDEDEVSCGDDEE-------------ESDEQYDEEDDD----- 63
           + +KR  ICISSSSDDD     +SCGDDEE             ES+E++D+EDDD     
Sbjct: 3   KSSKRRVICISSSSDDD-----ISCGDDEEKSEEYDDQDDADWESEEEFDDEDDDDGDSE 62

Query: 64  ---------EGESEEEYDNEGSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENG 123
                    EGESEEE+DNE SD+DCD+VLSERVIRFLKENKNLDSLTL DCKAYLREN 
Sbjct: 63  EEFDYKDDVEGESEEEFDNEDSDNDCDEVLSERVIRFLKENKNLDSLTLNDCKAYLRENR 122

Query: 124 LRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDK 183
           LRIAGTK+VCIQR+ EHWRMKD NGEA YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDK
Sbjct: 123 LRIAGTKAVCIQRVEEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDK 182

Query: 184 VTRHGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKL 243
           VTRHGGLIGKRTVAGRVVKESYGA+KQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKL
Sbjct: 183 VTRHGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKL 242

Query: 244 RTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTL 292
           RTFR+LWNDEAER+QVLAEKHKRGAAAR LRAM+ +K  F QT G  KNQ H H ARQ L
Sbjct: 243 RTFRRLWNDEAERVQVLAEKHKRGAAARGLRAMQKKKRKFPQTRGCAKNQGHVHLARQGL 302

BLAST of Moc02g13980 vs. NCBI nr
Match: XP_023512636.1 (zinc finger CCCH domain-containing protein 62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428.7 bits (1101), Expect = 4.1e-116
Identity = 229/298 (76.85%), Postives = 253/298 (84.90%), Query Frame = 0

Query: 1   MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
           M +RG+KR  I +SSSS++          DDEEESDE+YD+EDDDEGESEEE+DN  SD+
Sbjct: 1   MPERGSKRRVIYLSSSSEE----------DDEEESDEEYDDEDDDEGESEEEFDNGCSDN 60

Query: 61  DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
           DCD+VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIAGTK+VCIQR++EHWRMKD N
Sbjct: 61  DCDEVLSQRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGN 120

Query: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
           GEA YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTR GGLIGKRTVAGRVVKESYGA
Sbjct: 121 GEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGA 180

Query: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
           +KQQHTFTVEVLWS GVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKHKRG
Sbjct: 181 SKQQHTFTVEVLWSTGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRG 240

Query: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP 299
           AAAR +RA++ RK   +Q  G  KNQ H    RQ LNS  S K M+S+ KN  +RRHP
Sbjct: 241 AAARGVRALQKRKRKLVQIGGSGKNQGHVQLPRQALNSNGSRKSMRSRDKNNAVRRHP 288

BLAST of Moc02g13980 vs. NCBI nr
Match: KGN62051.1 (hypothetical protein Csa_006128 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 3.5e-115
Identity = 227/303 (74.92%), Postives = 259/303 (85.48%), Query Frame = 0

Query: 1   MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEE----ESDEQYDEEDDDEGESEEEYDNE 60
           MT RG+KR+ ICISSSS  D DE+E    DDE+    +S+E++D++DDDEGES EE+DNE
Sbjct: 1   MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNE 60

Query: 61  GSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRM 120
            SD+ CD+VLS+RVIRFLKENKNLDSLTL DCKAYLRE+ LRIAGTK+VCIQR++EHWR+
Sbjct: 61  ESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESRLRIAGTKAVCIQRVKEHWRL 120

Query: 121 KDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE 180
           K+ NGE QYP+SSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE
Sbjct: 121 KNGNGEVQYPKSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE 180

Query: 181 SYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEK 240
           SYGA+KQQHTFTVEVLWSRGVRKL PLYPLLVKGRNLYKLRTFR LWNDEAER+Q LAEK
Sbjct: 181 SYGASKQQHTFTVEVLWSRGVRKLRPLYPLLVKGRNLYKLRTFRLLWNDEAERVQALAEK 240

Query: 241 HKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRR 300
           H+RG AAR LRAM+ +K   +QT+G  +NQ H H ARQ L SKE  +RM S+  N V+RR
Sbjct: 241 HRRGVAARGLRAMQKKKRKTIQTKGCAENQGHVHLARQPLKSKEKRQRMPSRDNNNVVRR 300

BLAST of Moc02g13980 vs. NCBI nr
Match: XP_022971662.1 (zinc finger CCCH domain-containing protein 62 isoform X1 [Cucurbita maxima])

HSP 1 Score: 425.2 bits (1092), Expect = 4.5e-115
Identity = 227/298 (76.17%), Postives = 251/298 (84.23%), Query Frame = 0

Query: 1   MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
           M +RG+KR  + + SSS+           DDEEESDE+YD+EDDDEGESE+E+DNE SD+
Sbjct: 1   MPERGSKRRVVYLYSSSE-----------DDEEESDEEYDDEDDDEGESEKEFDNECSDN 60

Query: 61  DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
           DCD+VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIAGTK+VCIQR++EHWRMKD N
Sbjct: 61  DCDEVLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGN 120

Query: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
           GE  YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTR GGLIGKRTVAGRVVKESYGA
Sbjct: 121 GEVHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGA 180

Query: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
           +KQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKHKRG
Sbjct: 181 SKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRG 240

Query: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP 299
           AAAR +RA++ RK   LQ  G  KNQ      RQ LNS  S K M+S+ KN  +RRHP
Sbjct: 241 AAARGVRALQKRKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHP 287

BLAST of Moc02g13980 vs. ExPASy Swiss-Prot
Match: Q338N2 (Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0391300 PE=4 SV=2)

HSP 1 Score: 167.9 bits (424), Expect = 1.7e-40
Identity = 128/328 (39.02%), Postives = 167/328 (50.91%), Query Frame = 0

Query: 18  DDDDDEDEVSCGDDEEESDEQYD--EEDDDEGES--------EEEYDN------EGSDDD 77
           +++  E+EV   D+EEE  E YD  EEDD E  S           YD+         D +
Sbjct: 24  EEEGSEEEVESDDEEEEEGEGYDWSEEDDPEAASLAGICDPDAGSYDDPTFDPAADGDLE 83

Query: 78  CDDVLSERVIRF------------------------------LKENKNLDSLTLKDCKAY 137
            D VL  R+ R                               L  +  L+ L + +CKAY
Sbjct: 84  VDAVLRSRMARMSLSSARKDRKGSRMPKMGKEEMDLLAMVDKLMHDGQLEKLKVYECKAY 143

Query: 138 LRENGLRIAGTKSVCIQRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVY 197
           LR + LR++G K V + RIR    +K   GE +YP SSFV+NC GD C+GDVV+F Q +Y
Sbjct: 144 LRMHKLRLSGNKEVLLTRIRGQIEVK-TMGEVKYPVSSFVLNCQGDSCKGDVVVFEQNIY 203

Query: 198 AKFDKVTR--HGGLIGKRTVAGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVK 257
            +     R   G L G+RT AGR++KESYG  KQQHTFT+E+LWSRG +  PPL+PLL+K
Sbjct: 204 KRKKGAPRGVKGHLCGQRTNAGRIIKESYGTKKQQHTFTIEILWSRGYKPWPPLHPLLIK 263

Query: 258 GRNLYKLRTFRQLWNDEAERLQVLAEKHKRGAAARSLRAMRTRKINFLQTEGGVKNQRHF 298
           GRNLYK +T RQ W DE ER + L EKH RG  AR  R +R +           +N+R  
Sbjct: 264 GRNLYKDKTMRQPWLDEEERNRALQEKHARGYVARKTREVRIK---------DKENERMR 323

BLAST of Moc02g13980 vs. ExPASy TrEMBL
Match: A0A6J1E0C9 (zinc finger CCCH domain-containing protein 62 OS=Momordica charantia OX=3673 GN=LOC111024763 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 1.7e-160
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0

Query: 1   MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
           MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD
Sbjct: 1   MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60

Query: 61  DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
           DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN
Sbjct: 61  DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120

Query: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
           GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA
Sbjct: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180

Query: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
           TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG
Sbjct: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240

Query: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT 300
           AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT
Sbjct: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHPT 299

BLAST of Moc02g13980 vs. ExPASy TrEMBL
Match: A0A0A0LQ19 (SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G292810 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.7e-115
Identity = 227/303 (74.92%), Postives = 259/303 (85.48%), Query Frame = 0

Query: 1   MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEE----ESDEQYDEEDDDEGESEEEYDNE 60
           MT RG+KR+ ICISSSS  D DE+E    DDE+    +S+E++D++DDDEGES EE+DNE
Sbjct: 1   MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNE 60

Query: 61  GSDDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRM 120
            SD+ CD+VLS+RVIRFLKENKNLDSLTL DCKAYLRE+ LRIAGTK+VCIQR++EHWR+
Sbjct: 61  ESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESRLRIAGTKAVCIQRVKEHWRL 120

Query: 121 KDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE 180
           K+ NGE QYP+SSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE
Sbjct: 121 KNGNGEVQYPKSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE 180

Query: 181 SYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEK 240
           SYGA+KQQHTFTVEVLWSRGVRKL PLYPLLVKGRNLYKLRTFR LWNDEAER+Q LAEK
Sbjct: 181 SYGASKQQHTFTVEVLWSRGVRKLRPLYPLLVKGRNLYKLRTFRLLWNDEAERVQALAEK 240

Query: 241 HKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRR 300
           H+RG AAR LRAM+ +K   +QT+G  +NQ H H ARQ L SKE  +RM S+  N V+RR
Sbjct: 241 HRRGVAARGLRAMQKKKRKTIQTKGCAENQGHVHLARQPLKSKEKRQRMPSRDNNNVVRR 300

BLAST of Moc02g13980 vs. ExPASy TrEMBL
Match: A0A6J1I2K8 (zinc finger CCCH domain-containing protein 62 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470342 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.2e-115
Identity = 227/298 (76.17%), Postives = 251/298 (84.23%), Query Frame = 0

Query: 1   MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60
           M +RG+KR  + + SSS+           DDEEESDE+YD+EDDDEGESE+E+DNE SD+
Sbjct: 1   MPERGSKRRVVYLYSSSE-----------DDEEESDEEYDDEDDDEGESEKEFDNECSDN 60

Query: 61  DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120
           DCD+VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIAGTK+VCIQR++EHWRMKD N
Sbjct: 61  DCDEVLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGN 120

Query: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180
           GE  YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTR GGLIGKRTVAGRVVKESYGA
Sbjct: 121 GEVHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGA 180

Query: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240
           +KQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKHKRG
Sbjct: 181 SKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRG 240

Query: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP 299
           AAAR +RA++ RK   LQ  G  KNQ      RQ LNS  S K M+S+ KN  +RRHP
Sbjct: 241 AAARGVRALQKRKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHP 287

BLAST of Moc02g13980 vs. ExPASy TrEMBL
Match: A0A1S4E1S9 (zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.7e-113
Identity = 231/307 (75.24%), Postives = 257/307 (83.71%), Query Frame = 0

Query: 1   MTDRGNKRSFICISSSSDDD-------DDEDEVSCGDDEEESDEQYD-----EEDDDEGE 60
           M+ RG+KR+ ICISSSSDDD       DDED+   GD EEE  ++ D     EEDDDEGE
Sbjct: 30  MSKRGSKRTVICISSSSDDDEEESVEYDDEDD-GVGDSEEEFHDEDDGDVNSEEDDDEGE 89

Query: 61  SEEEYDNEGSDDDCDD-VLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCI 120
           S EE+D+E SD+ CD+ VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIAGTK+VCI
Sbjct: 90  SGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCI 149

Query: 121 QRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKR 180
           QR++EHWR+KD NGE QYPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKR
Sbjct: 150 QRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKR 209

Query: 181 TVAGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEA 240
           TVAGRVVKESYGA+KQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEA
Sbjct: 210 TVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEA 269

Query: 241 ERLQVLAEKHKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQS 295
           ER+QVLAEKH+RGAAAR LRAM+ +K   +QT+G  KNQ H H ARQ L SKE  +RM S
Sbjct: 270 ERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQRMPS 329

BLAST of Moc02g13980 vs. ExPASy TrEMBL
Match: A0A1S4E1T3 (zinc finger CCCH domain-containing protein 62-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 3.5e-113
Identity = 232/308 (75.32%), Postives = 257/308 (83.44%), Query Frame = 0

Query: 1   MTDRGNKRSFICISSSSDDD-------DDEDEVSCGDDEEESDEQYD-----EEDDDEGE 60
           M+ RG+KR+ ICISSSSDDD       DDED+   GD EEE  ++ D     EEDDDEGE
Sbjct: 30  MSKRGSKRTVICISSSSDDDEEESVEYDDEDD-GVGDSEEEFHDEDDGDVNSEEDDDEGE 89

Query: 61  SEEEYDNEGSDDDCDD-VLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCI 120
           S EE+D+E SD+ CD+ VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIAGTK+VCI
Sbjct: 90  SGEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCI 149

Query: 121 QRIREHWRMKDENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKR 180
           QR++EHWR+KD NGE QYPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTRHGGLIGKR
Sbjct: 150 QRVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKR 209

Query: 181 TVAGRVVKESYGATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEA 240
           TVAGRVVKESYGA+KQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEA
Sbjct: 210 TVAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEA 269

Query: 241 ERLQVLAEKHKRGAAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQS 296
           ER+QVLAEKH+RGAAAR LRAM+ +K   +QT+G  KNQ H H ARQ L SKE  +RM S
Sbjct: 270 ERVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQRMPS 329

BLAST of Moc02g13980 vs. TAIR 10
Match: AT5G66840.1 (SAP domain-containing protein )

HSP 1 Score: 246.1 bits (627), Expect = 3.5e-65
Identity = 142/300 (47.33%), Postives = 195/300 (65.00%), Query Frame = 0

Query: 11  ICISSSSDDDDDEDEVSCGDDEEESDE---------QYDEEDDDEGESEEEYDN---EGS 70
           +C S   ++D   DE +  + EEE DE          +  +DDD  ES+ E D    +G 
Sbjct: 11  LCSSEEEEEDVFGDENNYDETEEEEDEDTNSSEDDSDWSHDDDDATESDVEADEIGVKGD 70

Query: 71  DDDCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKD 130
           +DD D+   ++V R L    +L S+ +K+CKAYLR++GLR++GTK VCI RI EHWR+KD
Sbjct: 71  NDDGDE--DDKVTRLLTAGSDLKSVNVKECKAYLRKHGLRLSGTKPVCIDRILEHWRIKD 130

Query: 131 ENGEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESY 190
             GEA YP+SSF +NC GDVC+GD+VLFTQKV+ K++K+ + G ++G+RTVAG+VVKESY
Sbjct: 131 GTGEAVYPKSSFAINCKGDVCKGDIVLFTQKVHHKYEKMKKSGNIMGRRTVAGQVVKESY 190

Query: 191 GATKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHK 250
           G  KQQHTFT+EVLW  G +KLPPLYPLLVKGRNLY+L T RQ W +E +R++VL EKH 
Sbjct: 191 GTAKQQHTFTIEVLWCEGTQKLPPLYPLLVKGRNLYRLMTLRQRWPNEEDRVKVLNEKHN 250

Query: 251 RGAAARSLRAMRTRKINFLQTEGGVKNQRHF-HPARQTLNSKESSKRMQSKGKNKVLRRH 298
           RGAAAR +   R  K  ++  +G ++   H   P +      E  + +  + +      H
Sbjct: 251 RGAAARKVMRERKIKSGYVLKDGRLQKPGHVKKPCQVKTRKNEKDENLTQRLRQNTPANH 308

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158231.13.5e-160100.00zinc finger CCCH domain-containing protein 62 [Momordica charantia][more]
XP_038902878.14.4e-11875.87zinc finger CCCH domain-containing protein 62-like [Benincasa hispida][more]
XP_023512636.14.1e-11676.85zinc finger CCCH domain-containing protein 62 [Cucurbita pepo subsp. pepo][more]
KGN62051.13.5e-11574.92hypothetical protein Csa_006128 [Cucumis sativus][more]
XP_022971662.14.5e-11576.17zinc finger CCCH domain-containing protein 62 isoform X1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q338N21.7e-4039.02Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX... [more]
Match NameE-valueIdentityDescription
A0A6J1E0C91.7e-160100.00zinc finger CCCH domain-containing protein 62 OS=Momordica charantia OX=3673 GN=... [more]
A0A0A0LQ191.7e-11574.92SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G292810 PE=4 SV... [more]
A0A6J1I2K82.2e-11576.17zinc finger CCCH domain-containing protein 62 isoform X1 OS=Cucurbita maxima OX=... [more]
A0A1S4E1S92.7e-11375.24zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX... [more]
A0A1S4E1T33.5e-11375.32zinc finger CCCH domain-containing protein 62-like isoform X3 OS=Cucumis melo OX... [more]
Match NameE-valueIdentityDescription
AT5G66840.13.5e-6547.33SAP domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainPFAMPF02037SAPcoord: 80..114
e-value: 2.4E-9
score: 36.8
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 77..124
e-value: 1.5E-5
score: 26.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availablePANTHERPTHR35323SAP DOMAIN-CONTAINING PROTEINcoord: 1..290
NoneNo IPR availablePANTHERPTHR35323:SF2SAP DOMAIN-CONTAINING PROTEINcoord: 1..290

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc02g13980.1Moc02g13980.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process