Moc02g13160 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g13160
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribosomal protein S7
Location	chr2: 9637383 .. 9639139 (+)
RNA-Seq Expression	Moc02g13160
Synteny	Moc02g13160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAGGTTGGGAAGACAAGAGACTAGAAAAAGTTAGGTCACAGTGAGGAACAAAGACGATAATAGGTAAGGAAAGTGAGTGGGGAAGAAGATATTGACAAAGATGATTTCACTTGAAAAACTCTATTTTCTCCTTAGAAACAAGTTGAGAAAGGTGTCTCTTCTTTTTCCTAATCTCCTATTTGTTGAAAGATTGAGTCTGATTTTGTGTTTTAGCTTTTGGATCAAATGATGTTTTCCTGTTGTCTATTTCATGGTTTCATTACTAATAGTTCATAGGGTTGAAGTATTTGAGAAGTGAGTTTGAACAATAAACAACCTAGGTACAGATACATGTTCTAAGATCATTTTTACATAAAGGAATGTGTTAGGAAGTACTCATTTTTATAGTAAGTCCCCCTTTATCAAAGCTAGGTGGAGAAGACATCAAGGTACAAATACTGTCAAAGCTGCCAAATCCCTAAAACATAGGTGGCCACTTCTTAGATTTTGTTGGAAAATTGGTTGTTCTAGATTCATTATTATTCTTTCAAAGTTTGATCCTTAGCGTATTTTGTTGGAACGGAAGAGATCTCTTATACACGGCTAAGAGAAGGTTCTCTAAGAGACTTGAAAGGGTGTGCAGTGTTTGTTGCAAAGGGAGAAAATGAGTTCATGATTCTCTATAGAATTTCGTGATATACACCCTACGGAGATTGAATTATTTTACCACCTTATGTTTATTTTTGTACTTAAAATTTCAGCTTTACTTTTGTATATGCGTGGTTTCATGTTATAGATAAGAGTTAATGATCAGGTTAGTTTGAGTTTACATATGAGATCATTTTCACATAATATATAATTTTACTTATTCATTTAGCTAACTGGATATTGTTTTCTCCCTTACTTATTGCACGAACTTAAAAAAGTTAAAAACCATGATTGAAACTGATTGATTTATGGACTTTTTCGGGTTAGTGCGTGAAACATATATATGTTAGTTAGATGTTGACATTTGACTCCCTCCAAATATATACTGTGGACTGATTTAGATATTTGTATAAGGTTGATATTTGTTGTGAGTATTTCAGATTCGTATATCTATGTAATTGTCATTCTTTTTAAATTTAAATAGTTGGATAATTGTGTGGCTATCCTACAACAAAAATAGCCAATTAAGACTTAGTGTTTATATGTGTCATGCATATAGTATGAAGTCTAGTTGGATAATTGTGTGGTTTAAAGTTTAGTTAGATAATTGTTTGGCTATCTTACAGCAAAGATAGTCAATTAAAATTTAATGTTTATATGTGTCATGCATATATATAGTATAAAGTCTAGTTGGATAATTGTGTAGTTTAAAGTTTAGTTGGATAATTATGTGGTTATAGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTTATGGTTGACGCCGTAGAGAATATAAAGCCCATATGCGAAGTAGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGGATGCTTACCGAAAGAGGGGAATTGCACGTAAGAAAAGGGAGAATCCTGCAGCAAAGATAGTCAATTAA

mRNA sequence

ATGATGAAGATAAGAGTTAATGATCAGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTTATGGTTGACGCCGTAGAGAATATAAAGCCCATATGCGAAGTAGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGGATGCTTACCGAAAGAGGGGAATTGCACGTAAGAAAAGGGAGAATCCTGCAGCAAAGATAGTCAATTAA

Coding sequence (CDS)

ATGATGAAGATAAGAGTTAATGATCAGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTTATGGTTGACGCCGTAGAGAATATAAAGCCCATATGCGAAGTAGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGGATGCTTACCGAAAGAGGGGAATTGCACGTAAGAAAAGGGAGAATCCTGCAGCAAAGATAGTCAATTAA

Protein sequence

MMKIRVNDQGGLDGEQKQLIKKLVNFRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENPAAKIVN

Homology

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BLAST of Moc02g13160 vs. NCBI nr
Match: XP_022149485.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111017903, partial [Momordica charantia])

HSP 1 Score: 254.2 bits (648), Expect = 6.3e-64
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MMKIRVNDQGGLDGEQKQLIKKLVNFRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICE 60
           MMKIRVNDQGGLDGEQKQLIKKLVNFRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICE
Sbjct: 1   MMKIRVNDQGGLDGEQKQLIKKLVNFRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICE 60

Query: 61  VEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKR 120
           VEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKR
Sbjct: 61  VEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKR 120

Query: 121 GIARKKREN 130
           GIARKKREN
Sbjct: 121 GIARKKREN 129

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BLAST of Moc02g13160 vs. NCBI nr
Match: YP_009241662.1 (ribosomal protein S7 [Ziziphus jujuba] >YP_009565404.1 ribosomal protein S7 [Morus notabilis] >YP_009913635.1 ribosomal protein S7 [Luffa acutangula] >QWQ49870.1 ribosomal protein S7 [Zelkova schneideriana] >AMP43645.1 ribosomal protein S7 [Ziziphus jujuba] >QBB08761.1 ribosomal protein S7 [Morus notabilis] >QLJ93024.1 ribosomal protein S7 [Luffa acutangula])

HSP 1 Score: 228.8 bits (582), Expect = 2.8e-56
Identity = 120/130 (92.31%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLDGEQKQLIKKLVNF          RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 121

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BLAST of Moc02g13160 vs. NCBI nr
Match: YP_009243658.1 (ribosomal protein S7 [Cannabis sativa] >ALF04068.1 ribosomal protein S7 [Cannabis sativa] >AMR97555.1 ribosomal protein S7 [Cannabis sativa] >ANC49137.1 ribosomal protein S7 [Cannabis sativa] >QJE38178.1 ribosomal protein S7 [Cannabis sativa] >QJI81308.1 ribosomal protein S7 [Cannabis sativa])

HSP 1 Score: 228.8 bits (582), Expect = 2.8e-56
Identity = 120/130 (92.31%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLDGEQKQLIKKLVNF          RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 121

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BLAST of Moc02g13160 vs. NCBI nr
Match: WP_131796637.1 (30S ribosomal protein S7 [Candidatus Frankia datiscae])

HSP 1 Score: 228.0 bits (580), Expect = 4.8e-56
Identity = 119/130 (91.54%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLDGEQKQLIKKLVNF          RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EVEKVGVAGT+YDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK
Sbjct: 62  EVEKVGVAGTLYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 121

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BLAST of Moc02g13160 vs. NCBI nr
Match: QHD19691.1 (ribosomal protein S7 [Hemiptelea davidii])

HSP 1 Score: 227.6 bits (579), Expect = 6.3e-56
Identity = 119/130 (91.54%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLDGEQKQLIKKLVNF          RAIVYQTFHRPAQTERDVIKLMVDAV+NIKPIC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 121

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BLAST of Moc02g13160 vs. ExPASy Swiss-Prot
Match: P92557 (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS7 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-55
Identity = 114/130 (87.69%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLDGEQK LIKKLVNF          RAIVYQTFHRPA+TERDVIKLMVDAVENIKPIC
Sbjct: 2   GGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+K
Sbjct: 62  EVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQK 121

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BLAST of Moc02g13160 vs. ExPASy Swiss-Prot
Match: Q9MF82 (Ribosomal protein S7, mitochondrial OS=Beta vulgaris OX=161934 GN=RPS7 PE=2 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 8.8e-53
Identity = 110/130 (84.62%), Postives = 114/130 (87.69%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLD EQKQLIKKLVNF          RAIVYQTFHR A+TE DVIKLM+DAVENIKPIC
Sbjct: 2   GGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           +VEKV VAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC F EILDAYRK
Sbjct: 62  KVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFDEILDAYRK 121

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BLAST of Moc02g13160 vs. ExPASy Swiss-Prot
Match: Q01902 (Ribosomal protein S7, mitochondrial OS=Triticum aestivum OX=4565 GN=RPS7 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 8.8e-53
Identity = 109/130 (83.85%), Postives = 115/130 (88.46%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           G  DGEQK+LIKKLVNF          RAIVY+TFHR A+TERDVIKLMVDAV+NIKPIC
Sbjct: 2   GDFDGEQKELIKKLVNFRMIDGKRTRVRAIVYKTFHRLARTERDVIKLMVDAVDNIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EV KVGVAGTIYDVPGIVARDRQQTLAIRWIL AAFKRRISYRISLEKCSFAEILDAYRK
Sbjct: 62  EVVKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISYRISLEKCSFAEILDAYRK 121

[Close]

BLAST of Moc02g13160 vs. ExPASy Swiss-Prot
Match: P26867 (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS7 PE=3 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-31
Identity = 76/130 (58.46%), Postives = 101/130 (77.69%), Query Frame = 0


Query: 11  GLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPICE 70
           GL+G+QKQLIKKLV+           RAIVY+TFHR A    DVIKL+V+A+EN+KPICE
Sbjct: 85  GLNGKQKQLIKKLVHICMIDGKKTRSRAIVYKTFHRLA-PHGDVIKLLVNAIENVKPICE 144

Query: 71  VEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYR-ISLEKCSFAEILDAYRK 130
           V+KV ++GT   VP I+A +RQ+TLAIRW+LE+A KRR+  + ISL++C +AEIL+A +K
Sbjct: 145 VKKVRISGTTRLVPSIIATNRQETLAIRWMLESAAKRRMGKKSISLDQCLYAEILEASQK 204

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BLAST of Moc02g13160 vs. ExPASy Swiss-Prot
Match: Q2W2I7 (30S ribosomal protein S7 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rpsG PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.9e-11
Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 28  AIVYQTFHR-PAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLA 87
           AIVY    +  A+T +D +K+  +A++N+KP  EV    V G  Y VP  V  DR+Q LA
Sbjct: 41  AIVYGALDKIQAKTGQDPLKVFHEALDNVKPALEVRSRRVGGATYQVPVEVRSDRRQALA 100

Query: 88  IRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKREN 130
           IRW+++  + R+ S    +++ S  E+LDA   RG A KKRE+
Sbjct: 101 IRWLID--YSRKRSETTMIDRLS-GELLDAANNRGAAVKKRED 140

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BLAST of Moc02g13160 vs. ExPASy TrEMBL
Match: A0A6J1D5V0 (LOW QUALITY PROTEIN: uncharacterized protein LOC111017903 OS=Momordica charantia OX=3673 GN=LOC111017903 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MMKIRVNDQGGLDGEQKQLIKKLVNFRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICE 60
           MMKIRVNDQGGLDGEQKQLIKKLVNFRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICE
Sbjct: 1   MMKIRVNDQGGLDGEQKQLIKKLVNFRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICE 60

Query: 61  VEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKR 120
           VEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKR
Sbjct: 61  VEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKR 120

Query: 121 GIARKKREN 130
           GIARKKREN
Sbjct: 121 GIARKKREN 129

[Close]

BLAST of Moc02g13160 vs. ExPASy TrEMBL
Match: A0A0M4R6T5 (Ribosomal protein S7 OS=Cannabis sativa OX=3483 GN=rps7 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.4e-56
Identity = 120/130 (92.31%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLDGEQKQLIKKLVNF          RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 121

[Close]

BLAST of Moc02g13160 vs. ExPASy TrEMBL
Match: A0A142BZ01 (Ribosomal protein S7 OS=Ziziphus jujuba OX=326968 GN=rps7 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.4e-56
Identity = 120/130 (92.31%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLDGEQKQLIKKLVNF          RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 121

[Close]

BLAST of Moc02g13160 vs. ExPASy TrEMBL
Match: A0A7D6C7C9 (Ribosomal protein S7 OS=Luffa acutangula OX=56866 GN=rps7 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.4e-56
Identity = 120/130 (92.31%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLDGEQKQLIKKLVNF          RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 121

[Close]

BLAST of Moc02g13160 vs. ExPASy TrEMBL
Match: A0A411GRV8 (Ribosomal protein S7 OS=Morus notabilis OX=981085 GN=rps7 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.4e-56
Identity = 120/130 (92.31%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLDGEQKQLIKKLVNF          RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 121

[Close]

BLAST of Moc02g13160 vs. TAIR 10
Match: AT2G07696.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 217.2 bits (552), Expect = 7.9e-57
Identity = 114/130 (87.69%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLDGEQK LIKKLVNF          RAIVYQTFHRPA+TERDVIKLMVDAVENIKPIC
Sbjct: 2   GGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+K
Sbjct: 62  EVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQK 121

[Close]

BLAST of Moc02g13160 vs. TAIR 10
Match: ATMG01270.1 (mitochondrial ribosomal protein S7 )

HSP 1 Score: 217.2 bits (552), Expect = 7.9e-57
Identity = 114/130 (87.69%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 10  GGLDGEQKQLIKKLVNF----------RAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 69
           GGLDGEQK LIKKLVNF          RAIVYQTFHRPA+TERDVIKLMVDAVENIKPIC
Sbjct: 2   GGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPIC 61

Query: 70  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRK 129
           EV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+K
Sbjct: 62  EVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQK 121

[Close]

BLAST of Moc02g13160 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 43.5 bits (101), Expect = 1.6e-04
Identity = 33/127 (25.98%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 16  QKQLIKKLVN------FRAIVYQTFHR-----PAQTERDVIKLMVDAVENIKPICEVEKV 75
           + +L+  LVN       +++ YQ  +R       +TE + + ++  A+  + P   V+  
Sbjct: 19  RNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKAR 78

Query: 76  GVAGTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILDAYRKRG 129
            V G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G
Sbjct: 79  RVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSG 138

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BLAST of Moc02g13160 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 43.5 bits (101), Expect = 1.6e-04
Identity = 33/127 (25.98%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 16  QKQLIKKLVN------FRAIVYQTFHR-----PAQTERDVIKLMVDAVENIKPICEVEKV 75
           + +L+  LVN       +++ YQ  +R       +TE + + ++  A+  + P   V+  
Sbjct: 19  RNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKAR 78

Query: 76  GVAGTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILDAYRKRG 129
            V G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G
Sbjct: 79  RVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSG 138

The following BLAST results are available for this feature:

BLAST of Moc02g13160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149485.1	6.3e-64	100.00	LOW QUALITY PROTEIN: uncharacterized protein LOC111017903, partial [Momordica ch...	[more]
YP_009241662.1	2.8e-56	92.31	ribosomal protein S7 [Ziziphus jujuba] >YP_009565404.1 ribosomal protein S7 [Mor...	[more]
YP_009243658.1	2.8e-56	92.31	ribosomal protein S7 [Cannabis sativa] >ALF04068.1 ribosomal protein S7 [Cannabi...	[more]
WP_131796637.1	4.8e-56	91.54	30S ribosomal protein S7 [Candidatus Frankia datiscae]	[more]
QHD19691.1	6.3e-56	91.54	ribosomal protein S7 [Hemiptelea davidii]	[more]

BLAST of Moc02g13160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92557	1.1e-55	87.69	Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS7 PE=1...	[more]
Q9MF82	8.8e-53	84.62	Ribosomal protein S7, mitochondrial OS=Beta vulgaris OX=161934 GN=RPS7 PE=2 SV=2	[more]
Q01902	8.8e-53	83.85	Ribosomal protein S7, mitochondrial OS=Triticum aestivum OX=4565 GN=RPS7 PE=3 SV...	[more]
P26867	1.5e-31	58.46	Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS7 PE=...	[more]
Q2W2I7	4.9e-11	40.78	30S ribosomal protein S7 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700...	[more]

BLAST of Moc02g13160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5V0	3.0e-64	100.00	LOW QUALITY PROTEIN: uncharacterized protein LOC111017903 OS=Momordica charantia...	[more]
A0A0M4R6T5	1.4e-56	92.31	Ribosomal protein S7 OS=Cannabis sativa OX=3483 GN=rps7 PE=3 SV=1	[more]
A0A142BZ01	1.4e-56	92.31	Ribosomal protein S7 OS=Ziziphus jujuba OX=326968 GN=rps7 PE=3 SV=1	[more]
A0A7D6C7C9	1.4e-56	92.31	Ribosomal protein S7 OS=Luffa acutangula OX=56866 GN=rps7 PE=3 SV=1	[more]
A0A411GRV8	1.4e-56	92.31	Ribosomal protein S7 OS=Morus notabilis OX=981085 GN=rps7 PE=3 SV=1	[more]

BLAST of Moc02g13160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07696.1	7.9e-57	87.69	Ribosomal protein S7p/S5e family protein	[more]
ATMG01270.1	7.9e-57	87.69	mitochondrial ribosomal protein S7	[more]
ATCG01240.1	1.6e-04	25.98	ribosomal protein S7	[more]
ATCG00900.1	1.6e-04	25.98	Ribosomal protein S7p/S5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 27..129 e-value: 1.6E-20 score: 73.3
IPR036823	Ribosomal protein S7 domain superfamily	GENE3D	1.10.455.10	Ribosomal protein S7 domain	coord: 1..131 e-value: 2.0E-24 score: 88.2
IPR036823	Ribosomal protein S7 domain superfamily	SUPERFAMILY	47973	Ribosomal protein S7	coord: 27..129
None	No IPR available	PANTHER	PTHR11205:SF46	RIBOSOMAL PROTEIN S7	coord: 10..129
IPR000235	Ribosomal protein S5/S7	PANTHER	PTHR11205	RIBOSOMAL PROTEIN S7	coord: 10..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g13160.1	Moc02g13160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome