Moc02g12940 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g12940
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	VQ motif-containing protein 29
Location	chr2: 9435501 .. 9440679 (-)
RNA-Seq Expression	Moc02g12940
Synteny	Moc02g12940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTATTACGACCACCACCAGCCGCCGGTTGGGGCTCCGCCACCGCAACCGCAAGGTTCTTAACACGCTGCCCTCCTTTGATTTTGATTTTTGCTGCTTCCACGTTTATATATGTATGTATGATAGAATTATAAGTAATTGGCTGTTTGTAATCGATCGTAGGGTCCCCTCCAAAGGATGCTTATCCTCCGGTAGGGTATCCTGTTCAGGGCTACCCTCCGGCGCCGCCGCCTCCACAGTACATTCAGCCTCAGCCTCATCCCAACCAACAAACCGGTTTCCTTGAAGGATGGTGTGCTCTCTCTCTCGCTTTCTTCCGAATTTAAAACTTATTTATTTATTTTTGGTTTCTCCCATTATCCGTATTTCTTTGTTTTGTTAGTTTTGTTATATAGTTTTTATGAATGTTTTTAAAATCTAGGTGAGTATTTTTTTAAAAAATATTTTTTTTTCTTTGTAATATGCTTTCAAAAGTGCAAAAAACTTATTGATGAAATTATATATATAAAAAAAAAAACAAACTTAATTTTTATAAATAGAAATCTAGAAACAAAATAATTATCTGTACTTTTTTTTCACTTTTCTAGTTTATAAACTTTTATGAAGTTTATTTTGGTCTCTATTTTAGAAAAAGAATTATATTAAGTTTCTTTTGTTATTTGTTTCTAATTATTTAAATAGATAGTATAGCCACTTGATTTAGTTGAATATTGGATAAATAATTTTATTTTATTTTCTAATCTATAAAATTTGTGTCCAATAGATTTCTGAGTGACTTTTGCAGACTTTTCATTGTATATAATAAATTCTTGACATTAAAATTTTATGTTTAATATATGTCCATTTTAAAAAAAAATTTAGAGACCTACTAAATACAAAGTTGAAAGTGTAAGATACTTTTTAAAGATATAAGATATATTAATTAAGGACTTAATCTTGTAATTTAACTTATTTTGACAAATCAAAGAGGATTAAAGAAATAGTTATTTATTGCCATTAAAATATTAAAATAGACATTTTGATAGTCGATAAAAGCTTTGTTTGCGAGAGTGATTCAGAGGACGACCCACCGGTAGACCTAGACTCGAACAGATAGAATCGTACTACCGTTATGCTGTTTGACTGAACTCGTTGACTCCACATCCACCGAAAGTTGTTTAAATTGACATGTTTTTCTTAACGTGGGTGGTTAATTACCAATATAATAACAATTTTAACCTTTCTAATCCCTTCAACCACACTTCATCGAGCACCCCCACATGTTAATGCTATTATATGACATATATAAGTTTAATCATGGTCAAAATTTAATATTAATTCAGTTGGAGATTGAATTAAAAAAGGAAGAAAATTGAAACTTCTTAAATAATTAAGGAGTTAATGAAAAAAGTAATCGAATATTAAGGATTAAAACATATATCTAACCTTTAGTTTAATTAAAAGTTGAGTTTTGACCCACAAATGTATGGTTTATTTTGCAGTTTAGCAGCTCTTTGTTGCTGTTGTCTCTTGGATGCTTGCTTCTGAGAAGAAAGGATGGAACTTTAACTTATGATTCTAATTTCATTGTTGTAGTATGGTAATCATCAAATCTTGTTATTAATAATGTTATGTTTTTACACAACTTTCAAATTTACATGCTTGGTTTATTAATCTTTTAATATAGATTTTTTTTTGGAAATTCAACGAAAGAATTGATCTAATATATTTTTCAGACAATCAAAATGATAAAGGAATATGAATGAAAATACATTAAAATGAAATCAATCAGAATGAGAATGTTATTTCTTTGATGTTATTTATTAGAAATGCTCTAGAATCGGAATTAAAAGTTTATTGATGTTATTTACTAAAATGTAATGTCGATAATCGCTCTTTGTATCATGCACGAGCAACCACGTAGGTCTCGTTGAGCTCTTCTTTTTGATTCGCTCACTTGTTTACATGAGCAGGAGAAGTCGGAATCAGATATATAATAACTACTAGAATTATTCCTTAGTTCTAACTCGTGTTATTGAGATTTTTAATTAAAATACAAATACATTAACTAAAAAGTATTCTAGACGCTCTGCGAAATATACTTTGATGCTTAAGTTAATTCTGGGGGATGGATATGAGGCACGAAGAGTACATTGCAAAATTCTCAAATGAGAGTTAGCGTTTGTGTGTGGAGAACTTATCAATATTTATCTTAAAACGAATTGGCAATGAGAGGAGTACTCCATGTCTATTATAAACTCTTGTTAGATTCCTTATCTTTTTAATGTGAGATTCTTAACATTGTCTAAGAATTCGGGTAGGTATTCTCGTGTACCTTAATTAAGTTGTGTTGCAATGTCGCTTTCATGTGGAGAAGCGAGGAGGGAGAGGGAGAGAGAGGCATGATTCCCTTGGCCCCCTGGCATTTATATTCCCTCTATGATTGATATAGGGGTGTAGCGGTGTCCTTTGCAATCCTCTAGGGGGTGTCAGGATTCGGGTACAGGGTGCTAATACTTCCTTCGTTGATTGGTTCTCTTACAAAATGTTTGGTACGCTCGACCTGGTGCGCTCAGCTCCAAACTTCGGTGCACTTTGCTTAATATTGTGCGCTATAGCACGTGTCGTCTCAGCTTCATTGGATAATAATTATAATTTTTATTAGAACAACCATGGTTAAAATAAGTTTTTTATTAAAATTTGCTGTTCTAATATTTATGATAATAAAATTTATATTAAAATTTATTGTTGTAATATTTAATAATAATAAAATTTGTTTTAACAAGTTTGTTGATATTAATTAATAATGATAAAGTAAAATTAAATAATTAATAAATGAAATAGAATTTTATAACATTTTATAATAAAATCACATAGACTAATACAAAGTTGTATAAATCTTTATTATAAGAAAAATTACTAAGACTACTCCACAAACGAAGAATGAAATTGCAAAATAATTAACTAAAAAGTTAGGAGTCTTATTTACTATTAGAAGAAAAAAATGGAAAAAGTTGTAAAATAATTATTGAAAATATGTGGGTCCAGTGAATGAAATAAGAATGATATCGATGAGGTTGCATAAGAGGAATGAGATTGCTTATTTGGAAAGTGAGTGATTATTGTTTGAATTGAGTCCACTAATTGATTAAATACTAAACACTAGCCACTATTTATGATTTTTTAAAGTAATTTATTGTTTTGCTTTTGGTGGGTTGTACATTCATTTACCGGTTAGAGCTAGATTCATATTGACATTAAATAATTGTTTTATTAACTTAGTTGGATTCATGGGTGTTTAAATTTTTTAAATTAATTTATTGTTTTGCCTTTGATAGTACATTTGAGCTAGGCACAGATTGACCTTAAATAATTGTTTTATTAACCTAGTTGGATTTGTGAGTGTTTGCAAGGAATTGTTAGAAAAGACTCGCATTAATAAACTTGATTTGTATTTATGTATGTAGTGTACAATATCTAATGTAGCATCCTCTAATATTTTCTCTCCAGTGTAGACTTGATTTGAGGTTTAAAGAGTTTGTTCTCGTACCAAGGAGATTGGTGTCTCCGACTTCTAACTCGTTGAAATATTTTTTAGTTCATAAACTTTGAGTTTGTTGAAGATTTTCGACTTGACAAAGTTCTTAAATTTGTTGAAGTTGTTCGGCTATGATTCACTATATTATCTTTACCATCTATTGGCTTACTTTTTAATCGCTTTCGGCTTATATGGGTTTTGTACCTACATCCTAAACATTTGACACGTCATTACATAAAGCCTCACGAAAATAAACAGTTATCTTTTTTAAACTTCAAAAACCAAAATTTAAAATTTAATAAATCCTTTGCAAAAAAAAAAAAAAAGAATAAATGAAATAAAAGACATAATAATCTCAAATCTTAAAAAAGCGACCTCCTAAATAAAAGAGACTTAAATGAGGGTATTATATGGACGTTTTCATGTATCTTTTGTTTTAACACCAGACATATCACTAATATAAATATAATATTAATATTAATCATTTTTAAATATTCAAAAATAGTGGAATGTTTGTTTGTTAATATAAATATTTTTTACGAAATTTTTATTTTTATAATTTTTTTTAGATCGATATTGACATATTATCGATAGTTTCATGAAATTAAAACCTGACATTTAAAACATGGATTCAAACCAAAATTTATTTAGCATAGACATTGTCCATGTTCTATTATTAATATAGGTGTAGTTCATGGCATGGTATGAAATATCCATCTGACTCATCGATATGTCCATTTAACATTTACATGTATTTATGAGTTCGACATCAACATAAGAGTATATTAAAAAAATAAATAAAATACGAAAAATATTAACAAAATGTTAACTACTATATACATATTAATGATATTTAAATAAAAAAATATTTATTTATTAATTTAAACTTTTTAAAAATATCCATCAACATCAATATTTTGATCCATAAAATTGATAACTCGATATTTAGGAAGCTAGAATTCTGGTGCAGTCATACATTCGTAACCAAGCACACGGTAGCCAAATCGATCGGGTAAAAGCAAAAACAAAGTAGGATTTTTGGTCAACGACACGTCATATCACACATCACCAAGAACGTGAGCACGTGCGATGCATGGTGTAATTTCTTTTTGGGTGTATGGGTAGATGGCTGCTCCTGGTCAAATTCGTGCTACAAATAAGAAAAAACACACCGCCGACGGCTATTAATAATTCACAAAAATACCTTATAATAAAACAAAATTAACAAATTAATAAATAAATAATCTAACTTCTCTTAGCCTATATATATATATATATATATATAATTAGAAACAAACCCATCACTTCCACACGCACTTCAAATTCTTGTTTTAAAAAACTATAAATTTAAAATCTTCCATTTTGCTACCTATGGAGCCTCACTCCTCTTCTTCTTCGCCGGCGGTCAAGCCATGGAACAGGGCCGTGGCGCCGCTGCCGCCGACTCCGCCGCAGATTTACAAGGTGAACCCCGTCGACTTTCGGGACGTGGTCCAGAAGCTAACTGCGGCGCCCGAGTTCCAGGACCGCCGCCTCCAAGCCATGCCTGCCCCCCGCCCCAGCCCGCCCCCCGGTTCCGCCGCTTGCACGGATTTTTCCGGCGAGGGGGCTGTTATTTACTATGGGTATCCTGGAGTTGGATTCTCTGAAAGATATTAG

mRNA sequence

ATGAGTTATTACGACCACCACCAGCCGCCGGTTGGGGCTCCGCCACCGCAACCGCAAGGGTCCCCTCCAAAGGATGCTTATCCTCCGGTAGGGTATCCTGTTCAGGGCTACCCTCCGGCGCCGCCGCCTCCACAGTACATTCAGCCTCAGCCTCATCCCAACCAACAAACCGGTTTCCTTGAAGGATGCTCTTTGTTGCTGTTGTCTCTTGGATGCTTGCTTCTGAGAAGAAAGGATGGAACTTTAACTTATGATTCTAATTTCATTGTTGTAGGGTGTAGCGGTGTCCTTTGCAATCCTCTAGGGGGTGTCAGGATTCGGGTACAGGGTGCTAATACTTCCTTCGTTGATTGGTTCTCTTACAAAATGTTTGGTACGCTCGACCTGCCTCACTCCTCTTCTTCTTCGCCGGCGGTCAAGCCATGGAACAGGGCCGTGGCGCCGCTGCCGCCGACTCCGCCGCAGATTTACAAGGTGAACCCCGTCGACTTTCGGGACGTGGTCCAGAAGCTAACTGCGGCGCCCGAGTTCCAGGACCGCCGCCTCCAAGCCATGCCTGCCCCCCGCCCCAGCCCGCCCCCCGGTTCCGCCGCTTGCACGGATTTTTCCGGCGAGGGGGCTGTTATTTACTATGGGTATCCTGGAGTTGGATTCTCTGAAAGATATTAG

Coding sequence (CDS)

ATGAGTTATTACGACCACCACCAGCCGCCGGTTGGGGCTCCGCCACCGCAACCGCAAGGGTCCCCTCCAAAGGATGCTTATCCTCCGGTAGGGTATCCTGTTCAGGGCTACCCTCCGGCGCCGCCGCCTCCACAGTACATTCAGCCTCAGCCTCATCCCAACCAACAAACCGGTTTCCTTGAAGGATGCTCTTTGTTGCTGTTGTCTCTTGGATGCTTGCTTCTGAGAAGAAAGGATGGAACTTTAACTTATGATTCTAATTTCATTGTTGTAGGGTGTAGCGGTGTCCTTTGCAATCCTCTAGGGGGTGTCAGGATTCGGGTACAGGGTGCTAATACTTCCTTCGTTGATTGGTTCTCTTACAAAATGTTTGGTACGCTCGACCTGCCTCACTCCTCTTCTTCTTCGCCGGCGGTCAAGCCATGGAACAGGGCCGTGGCGCCGCTGCCGCCGACTCCGCCGCAGATTTACAAGGTGAACCCCGTCGACTTTCGGGACGTGGTCCAGAAGCTAACTGCGGCGCCCGAGTTCCAGGACCGCCGCCTCCAAGCCATGCCTGCCCCCCGCCCCAGCCCGCCCCCCGGTTCCGCCGCTTGCACGGATTTTTCCGGCGAGGGGGCTGTTATTTACTATGGGTATCCTGGAGTTGGATTCTCTGAAAGATATTAG

Protein sequence

MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFLEGCSLLLLSLGCLLLRRKDGTLTYDSNFIVVGCSGVLCNPLGGVRIRVQGANTSFVDWFSYKMFGTLDLPHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY

Homology

[Close]

BLAST of Moc02g12940 vs. NCBI nr
Match: XP_022149539.1 (VQ motif-containing protein 29 [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 9.6e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 130 PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPR 189
           PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPR
Sbjct: 3   PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPR 62

Query: 190 PSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY 223
           PSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY
Sbjct: 63  PSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY 95

[Close]

BLAST of Moc02g12940 vs. NCBI nr
Match: XP_022149526.1 (cysteine-rich and transmembrane domain-containing protein WIH1-like [Momordica charantia])

HSP 1 Score: 137.1 bits (344), Expect = 1.8e-28
Identity = 68/74 (91.89%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFL 60
          MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFL
Sbjct: 1  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFL 60

Query: 61 EGCSLLLLSLGCLL 75
          EGC L  L   CLL
Sbjct: 61 EGC-LAALCCCCLL 73

[Close]

BLAST of Moc02g12940 vs. NCBI nr
Match: MBA0590607.1 (hypothetical protein [Gossypium raimondii] >MBA0742087.1 hypothetical protein [Gossypium gossypioides])

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-17
Identity = 57/84 (67.86%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 1  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQY---IQPQPHPNQQT 60
          MSYY+  QPPVG PP  PQG PPKDAYPP GYP +GY   PPPPQY     P P   Q+T
Sbjct: 1  MSYYNQQQPPVGVPP--PQGYPPKDAYPPPGYPAEGY-AYPPPPQYQYAAAPPPRQQQET 60

Query: 61 GFLEGCSLLLLSLGCLLLRRKDGT 82
          GFLEGC+LLLLS GCLLLRRK  T
Sbjct: 61 GFLEGCTLLLLSSGCLLLRRKKRT 81

[Close]

BLAST of Moc02g12940 vs. NCBI nr
Match: KAA0045761.1 (VQ motif-containing protein 29 [Cucumis melo var. makuwa] >TYJ99521.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-15
Identity = 57/102 (55.88%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 130 PHSSS------SSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQ 189
           PHS S       +   K   +AVAP  PTPPQ+YKV+P++FRDVVQKLTAAPEFQDRRLQ
Sbjct: 3   PHSFSFYYTDQGASVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQ 62

Query: 190 AMPAPRPSPPPGSAACTDFSGE---GAVIYYGYPGVGFSERY 223
           AMP PRP+    S    D SGE   G V Y+G+     SERY
Sbjct: 63  AMPPPRPNVADQSRRPRDSSGEGEGGVVSYHGFFLGQSSERY 104

[Close]

BLAST of Moc02g12940 vs. NCBI nr
Match: GAY50094.1 (hypothetical protein CUMW_124080 [Citrus unshiu])

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-14
Identity = 61/109 (55.96%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 1   MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQ-GYPPAPPPPQYI--QPQPHPNQQT 60
           MSYY+ +QPPVGAPP  PQG PPKDAYPP GYPVQ GY    PPPQY     QP P Q+T
Sbjct: 1   MSYYNQNQPPVGAPP--PQGYPPKDAYPPPGYPVQGGYAQGYPPPQYAPQYAQPPPRQET 60

Query: 61  GFLEGC------SLLLLSLGCLLLRRKDGTLTYDSNF---IVVGCSGVL 98
           GFLEGC      SLLLL  GCLL       LT++  F    +V CS ++
Sbjct: 61  GFLEGCLDAFGGSLLLLPFGCLL-------LTFEERFQCSAMVNCSELI 100

[Close]

BLAST of Moc02g12940 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08
Identity = 43/81 (53.09%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 4  YDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPP----------APPPPQYIQPQPHP 63
          Y   Q PVGAPP  PQG PPKD YPP GYP  GYPP            PPPQY Q  P  
Sbjct: 2  YHQEQHPVGAPP--PQGYPPKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQYSQ-APQQ 61

Query: 64 NQQTGFLEGCSLLLLSLGCLL 75
           Q  G LEGC L  L   CLL
Sbjct: 62 KQNAGMLEGC-LAALCCCCLL 78

[Close]

BLAST of Moc02g12940 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.2e-07
Identity = 44/92 (47.83%), Postives = 47/92 (51.09%), Query Frame = 0


Query: 6  HHQPPVGAPPPQ--PQGSPPKDAYPPVGYPVQGYP-------------------PAPPPP 65
          ++QPPVG PPPQ  P    PKDAYPP GYP QGYP                   P P  P
Sbjct: 4  YNQPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAP 63

Query: 66 QYIQPQPHPNQQT--GFLEGCSLLLLSLGCLL 75
          QY  P  H  QQ+  GFLEGC L  L   CLL
Sbjct: 64 QYPPPPQHQQQQSSPGFLEGC-LAALCCCCLL 94

[Close]

BLAST of Moc02g12940 vs. ExPASy Swiss-Prot
Match: Q17094 (Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-04
Identity = 32/56 (57.14%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 2   SYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAP--PPPQYIQPQPHPNQ 56
           +Y     PP G PPP PQG PP+  YPP GYP QGYPP P  PPPQ   PQ  P Q
Sbjct: 382 AYPPQGYPPQGYPPPPPQGYPPQ-GYPPQGYPPQGYPPPPQGPPPQGPPPQAAPPQ 436

[Close]

BLAST of Moc02g12940 vs. ExPASy Swiss-Prot
Match: P24603 (Rhodopsin OS=Loligo forbesii OX=6618 GN=RHO PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-04
Identity = 32/56 (57.14%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 2   SYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAP--PPPQYIQPQPHPNQ 56
           +Y     PP G PPP PQG PP+  YPP GYP QGYPP P  PPPQ   PQ  P Q
Sbjct: 389 AYPPQGYPPQGYPPPPPQGYPPQ-GYPPQGYPPQGYPPPPQGPPPQGPPPQAAPPQ 443

[Close]

BLAST of Moc02g12940 vs. ExPASy TrEMBL
Match: A0A6J1D7B4 (VQ motif-containing protein 29 OS=Momordica charantia OX=3673 GN=LOC111017949 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 4.7e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 130 PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPR 189
           PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPR
Sbjct: 3   PHSSSSSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPR 62

Query: 190 PSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY 223
           PSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY
Sbjct: 63  PSPPPGSAACTDFSGEGAVIYYGYPGVGFSERY 95

[Close]

BLAST of Moc02g12940 vs. ExPASy TrEMBL
Match: A0A6J1D8M7 (cysteine-rich and transmembrane domain-containing protein WIH1-like OS=Momordica charantia OX=3673 GN=LOC111017938 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 8.8e-29
Identity = 68/74 (91.89%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFL 60
          MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFL
Sbjct: 1  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQYIQPQPHPNQQTGFL 60

Query: 61 EGCSLLLLSLGCLL 75
          EGC L  L   CLL
Sbjct: 61 EGC-LAALCCCCLL 73

[Close]

BLAST of Moc02g12940 vs. ExPASy TrEMBL
Match: A0A7J9C124 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_015187 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-18
Identity = 57/84 (67.86%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 1  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQY---IQPQPHPNQQT 60
          MSYY+  QPPVG PP  PQG PPKDAYPP GYP +GY   PPPPQY     P P   Q+T
Sbjct: 1  MSYYNQQQPPVGVPP--PQGYPPKDAYPPPGYPAEGY-AYPPPPQYQYAAAPPPRQQQET 60

Query: 61 GFLEGCSLLLLSLGCLLLRRKDGT 82
          GFLEGC+LLLLS GCLLLRRK  T
Sbjct: 61 GFLEGCTLLLLSSGCLLLRRKKRT 81

[Close]

BLAST of Moc02g12940 vs. ExPASy TrEMBL
Match: A0A7J8PMY2 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=Gorai_019305 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-18
Identity = 57/84 (67.86%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 1  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAPPPPQY---IQPQPHPNQQT 60
          MSYY+  QPPVG PP  PQG PPKDAYPP GYP +GY   PPPPQY     P P   Q+T
Sbjct: 1  MSYYNQQQPPVGVPP--PQGYPPKDAYPPPGYPAEGY-AYPPPPQYQYAAAPPPRQQQET 60

Query: 61 GFLEGCSLLLLSLGCLLLRRKDGT 82
          GFLEGC+LLLLS GCLLLRRK  T
Sbjct: 61 GFLEGCTLLLLSSGCLLLRRKKRT 81

[Close]

BLAST of Moc02g12940 vs. ExPASy TrEMBL
Match: A0A5A7TW54 (VQ motif-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00880 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.6e-16
Identity = 57/102 (55.88%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 130 PHSSS------SSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRLQ 189
           PHS S       +   K   +AVAP  PTPPQ+YKV+P++FRDVVQKLTAAPEFQDRRLQ
Sbjct: 3   PHSFSFYYTDQGASVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQ 62

Query: 190 AMPAPRPSPPPGSAACTDFSGE---GAVIYYGYPGVGFSERY 223
           AMP PRP+    S    D SGE   G V Y+G+     SERY
Sbjct: 63  AMPPPRPNVADQSRRPRDSSGEGEGGVVSYHGFFLGQSSERY 104

[Close]

BLAST of Moc02g12940 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-09
Identity = 43/81 (53.09%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 4  YDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPP----------APPPPQYIQPQPHP 63
          Y   Q PVGAPP  PQG PPKD YPP GYP  GYPP            PPPQY Q  P  
Sbjct: 2  YHQEQHPVGAPP--PQGYPPKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQYSQ-APQQ 61

Query: 64 NQQTGFLEGCSLLLLSLGCLL 75
           Q  G LEGC L  L   CLL
Sbjct: 62 KQNAGMLEGC-LAALCCCCLL 78

[Close]

BLAST of Moc02g12940 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 55.5 bits (132), Expect = 6.5e-08
Identity = 44/92 (47.83%), Postives = 47/92 (51.09%), Query Frame = 0


Query: 6  HHQPPVGAPPPQ--PQGSPPKDAYPPVGYPVQGYP-------------------PAPPPP 65
          ++QPPVG PPPQ  P    PKDAYPP GYP QGYP                   P P  P
Sbjct: 4  YNQPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAP 63

Query: 66 QYIQPQPHPNQQT--GFLEGCSLLLLSLGCLL 75
          QY  P  H  QQ+  GFLEGC L  L   CLL
Sbjct: 64 QYPPPPQHQQQQSSPGFLEGC-LAALCCCCLL 94

[Close]

BLAST of Moc02g12940 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 2.0e-04
Identity = 36/67 (53.73%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 1  MSYYDHHQPPVGAPPPQPQGSPPKDAYPPVGYPVQGYPPAP-PPPQYIQ----PQPHPNQ 60
          MSY D  Q PV APP  PQG PPK+ YPP GYP    PPA  PPPQY Q    P  +P  
Sbjct: 1  MSYQD-PQHPVSAPP--PQGYPPKEGYPPAGYP----PPAGYPPPQYPQAGYPPAGYPPP 60

Query: 61 QTGFLEG 63
          Q G+ +G
Sbjct: 61 QQGYGQG 60

The following BLAST results are available for this feature:

BLAST of Moc02g12940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149539.1	9.6e-46	100.00	VQ motif-containing protein 29 [Momordica charantia]	[more]
XP_022149526.1	1.8e-28	91.89	cysteine-rich and transmembrane domain-containing protein WIH1-like [Momordica c...	[more]
MBA0590607.1	1.1e-17	67.86	hypothetical protein [Gossypium raimondii] >MBA0742087.1 hypothetical protein [G...	[more]
KAA0045761.1	1.4e-15	55.88	VQ motif-containing protein 29 [Cucumis melo var. makuwa] >TYJ99521.1 VQ motif-c...	[more]
GAY50094.1	2.0e-14	55.96	hypothetical protein CUMW_124080 [Citrus unshiu]	[more]

BLAST of Moc02g12940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJW3	4.9e-08	53.09	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
Q8S8M0	9.2e-07	47.83	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q17094	1.9e-04	57.14	Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1	[more]
P24603	1.9e-04	57.14	Rhodopsin OS=Loligo forbesii OX=6618 GN=RHO PE=2 SV=1	[more]

BLAST of Moc02g12940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7B4	4.7e-46	100.00	VQ motif-containing protein 29 OS=Momordica charantia OX=3673 GN=LOC111017949 PE...	[more]
A0A6J1D8M7	8.8e-29	91.89	cysteine-rich and transmembrane domain-containing protein WIH1-like OS=Momordica...	[more]
A0A7J9C124	5.4e-18	67.86	Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_015187 PE=4 ...	[more]
A0A7J8PMY2	5.4e-18	67.86	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=Gorai_019305 PE=4 SV=...	[more]
A0A5A7TW54	6.6e-16	55.88	VQ motif-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Moc02g12940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67600.1	3.5e-09	53.09	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT2G41420.1	6.5e-08	47.83	proline-rich family protein	[more]
AT3G49845.1	2.0e-04	53.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 152..172 e-value: 2.4E-7 score: 30.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..50
None	No IPR available	PANTHER	PTHR34794:SF1	EXPRESSED PROTEIN	coord: 131..190
IPR039610	VQ motif-containing protein 29	PANTHER	PTHR34794	EXPRESSED PROTEIN	coord: 131..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g12940.1	Moc02g12940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane