Moc02g12850 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g12850
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Transmembrane protein
Location	chr2: 9381229 .. 9383071 (+)
RNA-Seq Expression	Moc02g12850
Synteny	Moc02g12850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGGTAGAAGCAGGTTCCTCTCGTTCCCCATGGTAATTGGCGCTGTTATGTAAGTTTTCTTCCCCAATTGACATCACTTCCTTGAACCCTTCTGAATAAATCAAACAATTCCAGAGTATAATCTGCAGAATCCTGGTGTTCAATTAGCTATTCATCATTGATTGAACACGAAATTTGATTTAGAACTTCATTTACTTGCCATTTCTTTCCTTGAAACAAGAATGAATTGCCTCGTATGATTTTTCTCAATTGAGGCCTGGGAAATGATAGGCCCAGGAAGTAGTTTTTACGATCAATAGTTGAGATTTCTTTCTGGTTAAACCCAATAAAATCAAGCGATGCTTGAGAGAAAATGAGGACGCTCCTAAAAGATTCGCTTTAACTGAAGTCGGCAGTTGTTTTCTTGCCTATAAAATCTTGTTTTTGATTATTGCCTTTTGGCTTTTAGGTTTTAGTTTGCTTCTCTATCTGTAAAAGGAGGATGACAGGGTTATTAGAAATCTTCTTTTGAATGTTATGAGTGCAAAAACTAAAGCAAATCGAGAGGTTTGAAGTTCTTGGTTTCAATTTATTAGCCCATAATTTAAGACAATGAGAACATATGCAGAACTTTTAATAGTTTCAAGAATTGGGGACATTATTAGTTAATGGAGTCTAGGAAGGTTCTGTTTCTGTAATTTAAGCACAACGTCGGAGGAACCAAAAATCTGTTAATGTAAGTTTATGAAAGCTGGCAGACAAGAAAAATTATGATTTTAACTTTTTAGGAGAAACAATTCTGTTTACAATTGGCTCACTGTAGGTTGTAGCATGAGTTTATGAATTCGTAATGTTTCTCAATTTTGGGATAAGCTGTGTGTTTCTTTCAAATAGAACATAAGTCGGATTTGTTCTTGGACGTTTGGTATAATCCTTAAGCTCTAGGATGAGTTCTGGGCCAGAATTAAAATACAGCTTGGTGTAAAATTACTCGAGAATCTGATTAGACTGTAAAATATATGTTGCAGCATTGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAAAAAGAAGTTGGAAGAAGAGGCAACCGCAAAGAAGACAGGTACCAGTTCAAGTCAGCATAGGTAAGGATGGTCCTGTTTAGCAACATGAATAGGAGAAATATTGTTATTGAAACAAGCTCTTAATACTTACAATCTTACATAGATATTTGAGGGTTGGGAACCAAAGTTTTTTCAAAGGTTGCCTTCTATTATTTATGACACCACAAGGATTATGCACAAAATATGGGTGTTCTATAGGAATAAACAAGACTTTTCTGCTGAAGTTTTCTACTTATGGGCATTAGACTCTGCAATATGCATCATGGGTGATTGTGTTTTTAATATTTTTCTCTTATCTATATGGTGCATCAAAGGGTAATCAATTGGAGTACAACATGCTAAAATTTTAGGACATAGCTAATGCTATTTATAGCCTTCACTCAGGGGAGAACTCAAGTATTTGAACTACTTAAACTAGTCTGGGAACTCCCTTGCGAGATTCCATCCTTAGACAAACTACTTTAAACAGGAGCAAAATTTGGTGAAACATGTTTATGTACAAGCCAAAAAACACTTTTGCGCAGGCTAAGGCACAGGCGCAGGTCAAACTTCATTCTCGCCCAAGCTTGTATGCAAAAGGTAATGTCCATTTTTGCTAAAGACGTTCTTTAAAAGCATATCTGTTTTCCCAATCTTTTAAATAGATGTGATTTTACTCTATCAGAAATCCTTACCATCCTTTAGATGTAAAAGATCGTTGGTGTTCGACAATTTGCCAGATAGAAAGGATAGTTGA

mRNA sequence

ATGTTCGGTAGAAGCAGGTTCCTCTCGTTCCCCATGGTAATTGGCGCTGTTATCATTGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAAAAAGAAGTTGGAAGAAGAGGCAACCGCAAAGAAGACAGGTACCAGTTCAAGTCAGCATAGGCTAAGGCACAGGCGCAGGTCAAACTTCATTCTCGCCCAAGCTTGTATGCAAAAGAAATCCTTACCATCCTTTAGATGTAAAAGATCGTTGGTGTTCGACAATTTGCCAGATAGAAAGGATAGTTGA

Coding sequence (CDS)

ATGTTCGGTAGAAGCAGGTTCCTCTCGTTCCCCATGGTAATTGGCGCTGTTATCATTGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAAAAAGAAGTTGGAAGAAGAGGCAACCGCAAAGAAGACAGGTACCAGTTCAAGTCAGCATAGGCTAAGGCACAGGCGCAGGTCAAACTTCATTCTCGCCCAAGCTTGTATGCAAAAGAAATCCTTACCATCCTTTAGATGTAAAAGATCGTTGGTGTTCGACAATTTGCCAGATAGAAAGGATAGTTGA

Protein sequence

MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQHRLRHRRRSNFILAQACMQKKSLPSFRCKRSLVFDNLPDRKDS

Homology

[Close]

BLAST of Moc02g12850 vs. NCBI nr
Match: XP_022149438.1 (uncharacterized protein LOC111017867 [Momordica charantia])

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQHRLRH 60
          MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQHRLRH
Sbjct: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQHRLRH 60

Query: 61 RRRSNFILAQACMQKKSLPSFRCKRSLVFDNLPDRKDS 99
          RRRSNFILAQACMQKKSLPSFRCKRSLVFDNLPDRKDS
Sbjct: 61 RRRSNFILAQACMQKKSLPSFRCKRSLVFDNLPDRKDS 98

[Close]

BLAST of Moc02g12850 vs. NCBI nr
Match: KAA0045764.1 (hypothetical protein E6C27_scaffold243G002850 [Cucumis melo var. makuwa] >TYJ99518.1 hypothetical protein E5676_scaffold123G00850 [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17
Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 0


Query: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS 55
          M GRSRFLSFPMV+GAVIIGVVSGKAIFGPPLDEYWKKKLEEEA AK+TGTS++
Sbjct: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGTSTT 54

[Close]

BLAST of Moc02g12850 vs. NCBI nr
Match: ONI02716.1 (hypothetical protein PRUPE_6G217600 [Prunus persica] >ONI02717.1 hypothetical protein PRUPE_6G217600 [Prunus persica] >VVA23363.1 PREDICTED: transmembrane [Prunus dulcis])

HSP 1 Score: 97.4 bits (241), Expect = 7.1e-17
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0


Query: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS 55
          MFGRSRFLSFPMVIGAV+IGVVSGKAIFGPPLDEYWKKK +EEA AK+T  SSS
Sbjct: 1  MFGRSRFLSFPMVIGAVVIGVVSGKAIFGPPLDEYWKKKQQEEAAAKETDASSS 54

[Close]

BLAST of Moc02g12850 vs. NCBI nr
Match: KAG5241053.1 (Transmembrane protein [Salix suchowensis])

HSP 1 Score: 97.4 bits (241), Expect = 7.1e-17
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS 55
          MF RSRFLSFP+VIGAVIIGVVSGKAIFGPPLDEYWK+KLEEEA AK+T TSSS
Sbjct: 1  MFFRSRFLSFPLVIGAVIIGVVSGKAIFGPPLDEYWKRKLEEEAAAKETDTSSS 54

[Close]

BLAST of Moc02g12850 vs. NCBI nr
Match: KAF8017290.1 (hypothetical protein BT93_H2469 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-16
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0


Query: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS 55
          MFGRSRFLSFP VIGAV+IGVVSGKAIFGPPLDEYWKKKLEE+A AK T +SSS
Sbjct: 1  MFGRSRFLSFPTVIGAVVIGVVSGKAIFGPPLDEYWKKKLEEDAAAKGTDSSSS 54

[Close]

BLAST of Moc02g12850 vs. ExPASy TrEMBL
Match: A0A6J1D6S8 (uncharacterized protein LOC111017867 OS=Momordica charantia OX=3673 GN=LOC111017867 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.4e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQHRLRH 60
          MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQHRLRH
Sbjct: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSSQHRLRH 60

Query: 61 RRRSNFILAQACMQKKSLPSFRCKRSLVFDNLPDRKDS 99
          RRRSNFILAQACMQKKSLPSFRCKRSLVFDNLPDRKDS
Sbjct: 61 RRRSNFILAQACMQKKSLPSFRCKRSLVFDNLPDRKDS 98

[Close]

BLAST of Moc02g12850 vs. ExPASy TrEMBL
Match: A0A5D3BMY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00850 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.3e-18
Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 0


Query: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS 55
          M GRSRFLSFPMV+GAVIIGVVSGKAIFGPPLDEYWKKKLEEEA AK+TGTS++
Sbjct: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGTSTT 54

[Close]

BLAST of Moc02g12850 vs. ExPASy TrEMBL
Match: A0A0A0LPX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G279280 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.3e-18
Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 0


Query: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS 55
          M GRSRFLSFPMV+GAVIIGVVSGKAIFGPPLDEYWKKKLEEEA AK+TGTS++
Sbjct: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGTSTT 54

[Close]

BLAST of Moc02g12850 vs. ExPASy TrEMBL
Match: A0A251NTQ5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G217600 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.4e-17
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0


Query: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS 55
          MFGRSRFLSFPMVIGAV+IGVVSGKAIFGPPLDEYWKKK +EEA AK+T  SSS
Sbjct: 1  MFGRSRFLSFPMVIGAVVIGVVSGKAIFGPPLDEYWKKKQQEEAAAKETDASSS 54

[Close]

BLAST of Moc02g12850 vs. ExPASy TrEMBL
Match: A0A5E4F5S4 (PREDICTED: transmembrane OS=Prunus dulcis OX=3755 GN=ALMOND_2B027815 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.4e-17
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0


Query: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTSSS 55
          MFGRSRFLSFPMVIGAV+IGVVSGKAIFGPPLDEYWKKK +EEA AK+T  SSS
Sbjct: 1  MFGRSRFLSFPMVIGAVVIGVVSGKAIFGPPLDEYWKKKQQEEAAAKETDASSS 54

[Close]

BLAST of Moc02g12850 vs. TAIR 10
Match: AT5G65880.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 3.2e-15
Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLE-EEATAKK 49
          MF R+RFLS PMVIGAV+IGVVSGKAIFGPPLD+YWK+KLE EEA   K
Sbjct: 1  MFRRNRFLSLPMVIGAVVIGVVSGKAIFGPPLDQYWKEKLEREEAVVAK 49

The following BLAST results are available for this feature:

BLAST of Moc02g12850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149438.1	1.1e-46	100.00	uncharacterized protein LOC111017867 [Momordica charantia]	[more]
KAA0045764.1	1.1e-17	88.89	hypothetical protein E6C27_scaffold243G002850 [Cucumis melo var. makuwa] >TYJ995...	[more]
ONI02716.1	7.1e-17	87.04	hypothetical protein PRUPE_6G217600 [Prunus persica] >ONI02717.1 hypothetical pr...	[more]
KAG5241053.1	7.1e-17	88.89	Transmembrane protein [Salix suchowensis]	[more]
KAF8017290.1	1.2e-16	87.04	hypothetical protein BT93_H2469 [Corymbia citriodora subsp. variegata]	[more]

BLAST of Moc02g12850 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc02g12850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6S8	5.4e-47	100.00	uncharacterized protein LOC111017867 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5D3BMY9	5.3e-18	88.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LPX1	5.3e-18	88.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G279280 PE=4 SV=1	[more]
A0A251NTQ5	3.4e-17	87.04	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G217600 PE=4 SV=1	[more]
A0A5E4F5S4	3.4e-17	87.04	PREDICTED: transmembrane OS=Prunus dulcis OX=3755 GN=ALMOND_2B027815 PE=4 SV=1	[more]

BLAST of Moc02g12850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65880.1	3.2e-15	79.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36815	BNAC03G48760D PROTEIN	coord: 2..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g12850.1	Moc02g12850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane