Moc02g12840 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc02g12840
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionhomeobox-leucine zipper protein ATHB-7-like
Locationchr2: 9379518 .. 9380212 (-)
RNA-Seq ExpressionMoc02g12840
SyntenyMoc02g12840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACAGAATCCATAATTTCTCTGCTGAGAATCGTCTTCCCAGTAAGGGCGTTGTGGTGTCTCCCGTTGACAACTCTAGGTCTAGATTATACGCCCCATTTATATGCTCTCAAATTAGGGTTTTGTTAGGATCACCGTATCCTTATTCTATCTAATCCTCTTGTCTTTGGGCGTGTATTTCACAAATCTAGGCCCGAATCTAAGTCATCAAAAGGCCCTAGGTTAAGGATGACAAAATGGAACAGGACTTATTAAAAATTGTTAGTTACCTACATGTTTCTTTTCTTTCTAATTTTTTGTTTTGAATTCTTCCTTCGATTAATCCAACCATGTTTACCTTTTACTTCCCTACGCCTTTGGTCCCCAGCTAATCAGTTTCCTTGTTCTGCAATGAAAAACACATCACTGAAAGATAGTTATTTTCAGAAGCAGATCACCACAAGACATAGGACTGGAAAAAGCCACACGTTATTCAAACTCCATTGGTTTTCCATTCAAACTTGTTCCATGTGGATGTGTTTGCAACTTGCAAGATGAATTGTGTTTCGATAATAATTATACAGATGGATCATATGAAACATCTGATAAATGGTGCGCTTTCGACTCAGATGATGGTGTCATCTTTGAACATCAGCCCTGTAGCAGTTTGCAGAGGCAAGTTTCTGGGGATGACAACGATTTCTTGTTTGAATAG

mRNA sequence

ATGTACAGAATCCATAATTTCTCTGCTGAGAATCGTCTTCCCAGTAAGGGCGTTGTGGTGTCTCCCGTTGACAACTCTAGAAGCAGATCACCACAAGACATAGGACTGGAAAAAGCCACACGTTATTCAAACTCCATTGGTTTTCCATTCAAACTTGTTCCATGTGGATGTGTTTGCAACTTGCAAGATGAATTGTGTTTCGATAATAATTATACAGATGGATCATATGAAACATCTGATAAATGGTGCGCTTTCGACTCAGATGATGGTGTCATCTTTGAACATCAGCCCTGTAGCAGTTTGCAGAGGCAAGTTTCTGGGGATGACAACGATTTCTTGTTTGAATAG

Coding sequence (CDS)

ATGTACAGAATCCATAATTTCTCTGCTGAGAATCGTCTTCCCAGTAAGGGCGTTGTGGTGTCTCCCGTTGACAACTCTAGAAGCAGATCACCACAAGACATAGGACTGGAAAAAGCCACACGTTATTCAAACTCCATTGGTTTTCCATTCAAACTTGTTCCATGTGGATGTGTTTGCAACTTGCAAGATGAATTGTGTTTCGATAATAATTATACAGATGGATCATATGAAACATCTGATAAATGGTGCGCTTTCGACTCAGATGATGGTGTCATCTTTGAACATCAGCCCTGTAGCAGTTTGCAGAGGCAAGTTTCTGGGGATGACAACGATTTCTTGTTTGAATAG

Protein sequence

MYRIHNFSAENRLPSKGVVVSPVDNSRSRSPQDIGLEKATRYSNSIGFPFKLVPCGCVCNLQDELCFDNNYTDGSYETSDKWCAFDSDDGVIFEHQPCSSLQRQVSGDDNDFLFE
Homology
[Close]
BLAST of Moc02g12840 vs. NCBI nr
Match: XP_022141070.1 (homeobox-leucine zipper protein ATHB-7-like [Momordica charantia])

HSP 1 Score: 61.6 bits (148), Expect = 5.1e-06
Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 73  DGSYETSDKWCAFDSDDGVIFEHQPCSSLQ 103
           +GSYETSDKWC FDSD GV+FE+QPCSSLQ
Sbjct: 188 NGSYETSDKWCGFDSDGGVVFEYQPCSSLQ 217

[Close]
BLAST of Moc02g12840 vs. ExPASy TrEMBL
Match: A0A6J1CGX7 (homeobox-leucine zipper protein ATHB-7-like OS=Momordica charantia OX=3673 GN=LOC111011558 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-06
Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 73  DGSYETSDKWCAFDSDDGVIFEHQPCSSLQ 103
           +GSYETSDKWC FDSD GV+FE+QPCSSLQ
Sbjct: 188 NGSYETSDKWCGFDSDGGVVFEYQPCSSLQ 217

The following BLAST results are available for this feature:
BLAST of Moc02g12840 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022141070.15.1e-0683.33homeobox-leucine zipper protein ATHB-7-like [Momordica charantia][more]
BLAST of Moc02g12840 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc02g12840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CGX72.4e-0683.33homeobox-leucine zipper protein ATHB-7-like OS=Momordica charantia OX=3673 GN=LO... [more]
BLAST of Moc02g12840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc02g12840.1Moc02g12840.1mRNA