Moc02g12460 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc02g12460
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Locationchr2: 9047645 .. 9054403 (-)
RNA-Seq ExpressionMoc02g12460
SyntenyMoc02g12460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAGCGAAGAGCCTGAAAGAAGCGGCTGATCACTTAGATGAGGCAAGACCGAGCCCTGATCGTCAACTTAATCCGACCACCCTTGACGGGGGAGAACCAGTGTCGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCGAGGCCGAGCCCTGGTTATCGACTTAATCCGACCACCCTTGATAAGGGAGAACCAGTGGCGGGCCTGATTAAAGCGACAGATCTTTCGGGAGAGGTAAGGCCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGGAGAACCGGCTGAAGAGGTAGAATCTGTCCCTCTGACAGCCGAAGATCGACGGGTCAACATTGGAACCAAGTTGGGGAGTGAGGAAAGAGAAAGCCTTATAAACTTCCTCAGAAGCAACGTTGATGTGTTCGCATGGTCACCGGAGGACATGCCAGGAATCGACCGAGGAGTTATGGTACATCGACTCAACGTCGACGAGAGCTGTAAGCCAGTGAAACAGAAGCGTCGCGCGTTCAACCAAGAAAGGAACGAGATTGTAGCTGAACAGGTGGATGAGCTATTGAAAACAGGCTTCATTCGGGAAGTACATTATCCCCAGTGGATATCCAACGTGGTGCTGGTAAAGAAGCCAAACGGCAAATGGAGAATGTGCATCGACTTCACGGATCTAAATAAGGCCTGTCCAAAGGATTCTTTTCCTTTGCCTCAAATAGATCAACTGGTTGATGTCACTGCAGGACATGAAAGATTGAGTTTCATGGATGCCTACTCTAGATATAATCAAATCAAGATGCATGTACCGGATCAGGAGAAAACTTCTTTTGTCACGAGTCGAGGCTTGTATTGCTACACCGTGATGCCGTTTGGACTAAAGAATGCAGGTGCAACCTACCAACGAATGGTGAATCGGATGTTTGCAGCCTTAATCGACAAAAATATGGAAGTCTACGTAGACGACATGCTGGTAAAGAGTCGAAAGAACGAGCGAGACGAGGAGGATTTGGCATAAGCGTTCGACATCTTGCGAAAGCACAAGATGAAGTTGAATCCCACCAAATGCACGTTTGGAGTGACCTCAGGCAAGTTCCTGGGATTTTTAGTGCACCAAAGGGGAATCGAAGCCAATCCAGATAAGATCAAAGCTGTTCTGGAGATGGATCCACCTAAAACTCTAAAGCAGCTGCAGGGACTCAATGGAAGGATAGCAGCACTCAACAGATTCGTTAGCCGTTTCACTGACAAGTGCCTACCATTCTTCAAAATCTTAAGGAAGAAAGGACAATTTGAATGGACGGAAGAATGCGAGGCTGCCTTTAAGGAGCTGAAACAGTACCTAGGGGCAGCTTCACTCCTCGCAAAGCCGATCGTGGGTGATGAGTTCTACTTATACTTAGCTGTATCCAGCACTGCGGTGAGTTCCGCGTTAATAAAGGAAGAAGATGGACGACAATCCCCAATTTACTACACAAGCAAAGCAATGGTAGATGCAGAACTTAGATACCCACCAATGGAGAAGCTGGCATTGGCACTGGTCACTTCAGCTCGGAGACTACGCCCGTATTTCCAAGCTCACAAAATAATGGTCCTCACCAACTTTCCCTTACGACAGATCTTACAAAAGCCAGACACTTCTGGACGACTGGTAAAGTGGGCTGTAGAGCTCAGCGAGTACGACATTCACTATAAGCCAAGAACTGCCATGAAAGGGCAGGTTGTGGCAGACTTCATAGCGGAATTAACACCAACAGAGCCTCAAGTATATAGTATCGACCCACAAGTGGTTGAGGAAGAACAACTCTGGACACTCTACGTAGATGGGTCCTCAAATTTTCGGGGATGCGGGGCAGGACTCCTACTAATCTCTCCAGATAAAGAAAGATTCGAATATGCGCTGCGATTCAACTTTCATGCATCCAACAACGAAGCCGAGTACGAAGCTCTACTAGCAGGACTAAAAGTGGCCAGGTACGTTTGGGGTCAGGAACATACTAATACTTAGTGATTCACAGCTGATTGTGGGTCAGGTGAAAGAGGAGTTCCAGGCTAGAGAGCCGCGAATGGCGAAATATCTTTCACAGGTAAGAAACCAGCTCGACCAGTTCTCAAAATATGAGATTCGACAAATTCCACGTGCTCAAAACGTCAACGCCGATGCGTTAGCTCGACTAGCTGCGACTTATGAAACCGACTTAGGCAGAACTGTACCGGTCGAGATTCTACCCGAGCCAAGCATAGAAGCTCAGAAAGCCATGGATATCGACAATCAAGGGCAACAAGAAGAAAACTGGAAGAGCCCTTTGATCAAATATTTGAAAGATGGGATCCTGCCTACTGAAAAGATAGAGGCCCAGCAGCTACAACGACGAGCGGCCAGATATGTGCTTAAAGACGACAATCTGTACAAAAGAGGCTACTCGTTGCCGCTTTTAAAATGTCTAATGCCCGATGAAGCCGACTACGTCATGAGAGAGATACATGAGGGTGTTTGTGGGAGCCATTCTGGAGCACGATCCCTAAGTCACAAAATAATTCGACAAGGGTACTACTGGCCGACCATGCTGAATGACACGAAGCAATTCACCAAAAAATGCGACAAATGCCAACGGTTTGCAACCGTACCTAGACAACCGCCAGAGCCTCTGACAAGCATAATGAGTCCTTGGCCCTTTGCTCAGTGGGGAATAGACCTTATAGGGCCTCTCCCACTAGGAAAGGGCCAGACCAAATTTGCAGTAGTGGCAGTCGACTATTTTACTAAGTGGGCCGAAGCCAAAGCCCTAGCGACAATTACAGAGAAAAAGGTCACCGACTTCATCTGGAAGAACATAATTTGCCGCTTCGGAATACCCTACGCCATTATCAGTGATAATGGGAAGCAGTTCGACAATGCTGCCTTTCGAGAATTTTGCAGGGAGTTGGGCATTAAGCACATCTGTTCCTCGCCAGCACATCCGCAGGCTAATGGGCAGGTTGAAACAGTCAACAAAATTATCAAAAGAACTCTGAAGACCAGATTAGAAAAGCTCAAAGGGTTGTGGGTAGAGGAACTTCCCAACGTATTATGGGCATACAGAACGACACCTTGTACTTCGACAGGAGAAACGCCATTTTCATTATCATTTGGCTCTGAGGCGGTAGTGCCAGTCGAGATCGGACTCCCCTCCCCAAGGGTAGAGCAGTTCACTCTACTTGACAACAACGAATCCGTAAAGCTCAACCTCGACCTATTAGAAGAACATCGAGAAACAGCACGACTACGAACGGCTGAATACAAAAATCGAATAGCTCGATACTACAACTCGAAGGTCAAGCAACGTGACTATAGAGAAGGTGATCTGGTGTTAAGAAAGGTTATGCCCAATACAAAAGATTCAACTAGCGGTGCGCTCGGGCCAACATGGGAGGGCCCATACAAAGTCACTAAAGTGGTACGAATAGGCACTTATGCTTTAGAAGACCAGCGGGGGAAGGCCTTACTACACCCGTGGCACGCCCAACACCTCAAAAGATACTACCACTAGTTCGACATATTTCTGGACATTTTTATGTTTCTCCATTATTTGGACCAACTAAGCTTATTGTAACCAAATCTTCGACAGGACGATTTTCCTACTAATAAAGTATTCGACGTTCGACGTGATACTTGAGTTCTTATGTTCATTCTGAAATAAATTTCTCAAGCAGGGGGCATCATATAAATATCTACATATCTACGACCTGAACATCTACATATCTACGACCAATCAAGGAACTCAAAATTGGGACGGACCTAGAAGCAGGCCGATAAGCTGAAAGCCAATCAGTGAAACCAGGGAAAAGAATCCCGAGGTGCTGAGAAAGGCATGCGTACGGGCCCAACAAGGTTAAAACAGAAAACAGGCAAGCCTAACCGATCAACGAAACCCACGGGTAGAAAATCATATGGCAAAAGCCAAAATAGGTTAAAAACCCGAGGGTGTTGATTTAACTGGGGGTAAAAAACCGGCAGAAGCCAAATATGTTAAAAACCTAAGGGTACCGACTAAACTCAGGGTATAAAGGCCATTGGCAAAAGCCAAGTGGGTTAGAAACCCGAGAGTAAACCCTGAGGTATAAAACATGGGCAAAAGCCAAATAGGTTAGAAACCCAAAGGTATCGACATTAGTTCTGTTAAAGTTAGATCCCAAGGCCAAAATGGTTTAAACTCAGATGAGAATAAAACCAGGCTCAAGAGACTTGATTATGGTCAACGAAAATTGGAAAAACTTCCAATTCATGAATAGTATCGACAAGTTCAAGGTACAAAACCAGTGGCAGGAACCAAGCACTAAGATCCAAAATTGGATCAAAAGCTTTTGGTAGATGCCCTGTGCGTTAGCAACCTTCCCATTTTTAGCCACTGATATACAATGATCTCGTGGTAACGACAAAGCGACAAGTACTCTCAAAACAAAGATCATTACAGAATTATTCGTCTTCTGTTTTGAGAGTGGGGGCCATTGTTATGGAGAACGAAAATGACCCGAAACGAGACAAGGAGTTGAAGTCTGATTGGGGAAGACCGGCCCGGGACATAACGGGCCGGCCAAAAGAGTGACCTAACGTCGGGGCAGAGAACGAGGAAAGCGACCAGAGGGAAGCCCACTGAGCCACGAAGGGCTCGGCCCCGACCCGGGGCTCGGTCCCGAGCCGTGCTCGGCCCACGGCCCAGCCAGTGATCCCCCGTCTTCGATCGACGATGTCGCCCAGGCCCTACAACGGTGAATTAGGGTTAGCTACGGAAGATTCTGGAACAACTTCATGCTATAAGTATTGATCCAGCCTTAGAGGTATAGGGGAAGAGAGTTGACTACATTTACGTTATTCTCTTGCTAACTTAAGCATCGGAGCCCGTGTGACTAGAGTCACACCGGTTTAGCTCGATTTGATTTTGCAGGTACTAGTCCCGGATCAACAAGTTTGGTGGATGCGAGGTAGTGAACCGGAGGACCGAAATCCACGCATCAACAATACTGTTCCTTCCAATTTTTCAGCTCTCTGTCCAAGTTTCATTATCCTTTTCTTGAAACCAAGAAACCGATAATTTTAGATAATTTAATATGCCTATTAAATAACTTTAATATAGTTGCTTAGTTTTTGTTCTTTTAAGAATTCAAATATATAATACTTTAATATAGTATTTATTTTTTAAATTGTTACTGGCGAATGAATTATGTGTCATATCCCACTTCAATAATCTTTGTCCTTTTGCAAGTTTGAAAATTTTCTCATCTGTTTGATCTTGAAAATGACTAACTTCACCAAGCTCGAACTTAGGTGACTGACGTACGAAGGGAACCGACATAGAGAAAGTAAAAAGTTCCAACGCTCAAGTCGGTCTCGAACCAATCTATTGCTCTAGAGAGAATAGTTTTGCATACCTGAAAAGTGAGGCGGGCGGATCTATTTATAGGTGTTAAGCTTTCAATAGCGAATGAGAACCGGTTAAAACTATCCCGTAAATCACGACCTGTTGTTGAAAAGAAGATTGGGTCGTTTTGTAATATAGCTCGCTCATCTTTGTTGGCCGAGCTATGAATCAATGACGAGCAATATCTGTGGCTGAGCTATGAAGCAAGAAAGTTCTCCATGGCTGAGGTGAGCTTTATGATCGAGCTAGCTCTTATAGTTGAGGTGAACTTTATGGCCAAGCTAACTCTTATTAGTCCACGTACCATGTCATTTTTATCACCTAACATTGGCCCTACTTTCGAGCTAAGCTTGGATATGGTCAACTCAAAAGTTCGGAGGTGATGACCTTCCTTCATGATAGCTCATCCTTTAGGCTTACGCGAGCTCTCTCATGGGAGCTTGCGTTTAGGTTGAGGTGAGCTTCATCAAGATAGCTCATCCTTTTGGCTTACGCGAGCTCTCTCACAGGGCTTCATTTAGGTCAAGGTGAGCTTTGTCATGATACCTTATACTTTAGGGTTACACTAACTCTCTCATGGGAGCTACATTTACGCCAAGGTGAGTTTCGTCTAGATAGCTCATCCTTTAGGCTTATGCGAGCTCTCTCATGGGGCTTGCATTTAGGTCGAGGCGAGCTTTATTGTGATACCTCATCCTTTAGGCTTATGCTAGCTCTCTCATGGGAGCTTGCGGTTAGGTCGAGGTGAGCTTTGTCAACATAGTTCATTCTTTAGGTTTACATAAGCTCTCTCGTGGAGCTTGTGTTTATGCTGAGTTGAGCTTTGTCGTGATACCTCATCCTTTACGCTAGTTCTCTCATGGTAGCTTATGGTTAGGTCGAGGTGAGCTTCGTTGTGAGCTAATTCTTTAGTCTTGACTCTAGGTGGCCCCGATCTTCAAAGTCGATGTAATCTTGGTTAGTCACTCCTAAGATTTCAATAACTCTCGCCTTAAATTTCTTCTTTTGGCTTGCATGATTACCTCGTAGAGACTCATCATTTAAGTTGGATGAGATATCGAATGGCGGTTCATCATTTTAGCTTAGGTGAGCTGTCTGATGAAAACTCATCCTTCATGTCGAGATGAGCTATCTAATGGAAGCTCATCATTTTGGTTGAGATGCACTGTCTAATAACTCATCCTTGAGGCTAAGGTGAGTAATCTGGTGGGAGCTCATCCATTGGCCCTCGTGATGAGCTATTTGACAGGGAGGTCATTATTGAGGTCGAGGTGAGCTACCTGATAGCTATCAAGTGGGAGCTCATCCTTGATGTTCAAGATGAGCTATTATGA

mRNA sequence

ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAGCGAAGAGCCTGAAAGAAGCGGCTGATCACTTAGATGAGGCAAGACCGAGCCCTGATCGTCAACTTAATCCGACCACCCTTGACGGGGGAGAACCAGTGTCGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCGAGGCCGAGCCCTGGTTATCGACTTAATCCGACCACCCTTGATAAGGGAGAACCAGTGGCGGGCCTGATTAAAGCGACAGATCTTTCGGGAGAGGTAAGGCCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGGAGAACCGGCTGAAGAGGTAGAATCTGTCCCTCTGACAGCCGAAGATCGACGGGTCAACATTGGAACCAAGTTGGGGAGTACTAGTCCCGGATCAACAAGTTTGGTGGATGCGAGCTATGAAGCAAGAAAGTTCTCCATGGCTGAGGTGAGCTTTATGATCGAGCTAGCTCTTATAGTTGAGCTTGGATATGGTCAACTCAAAAGTTCGGAGGTGATGACCTTCCTTCATGATAGCTCATCCTTTAGGCTTACGCGAGCTCTCTCATGGGAGCTTGCGTTTAGGTTGAGGGTTACACTAACTCTCTCATGGGAGCTACATTTACGCCAAGGTGAGTTTCGTCTAGATAGCTCATCCTTTAGGCTTATGCGAGCTCTCTCATGGGGCTTGCATTTAGGTCGAGGCGAGCTTTATTGTGATACCTCATCCTTTAGGCTTATGCTAGCTCTCTCATGGGAGCTTGCGGTTAGGTCGAGGGAGGTCATTATTGAGGTCGAGGTGAGCTACCTGATAGCTATCAAGTGGGAGCTCATCCTTGATGTTCAAGATGAGCTATTATGA

Coding sequence (CDS)

ATGAATCCTGATGAGAGCCATCGGTGCTTCGAAGCGAAGAGCCTGAAAGAAGCGGCTGATCACTTAGATGAGGCAAGACCGAGCCCTGATCGTCAACTTAATCCGACCACCCTTGACGGGGGAGAACCAGTGTCGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCGAGGCCGAGCCCTGGTTATCGACTTAATCCGACCACCCTTGATAAGGGAGAACCAGTGGCGGGCCTGATTAAAGCGACAGATCTTTCGGGAGAGGTAAGGCCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGGAGAACCGGCTGAAGAGGTAGAATCTGTCCCTCTGACAGCCGAAGATCGACGGGTCAACATTGGAACCAAGTTGGGGAGTACTAGTCCCGGATCAACAAGTTTGGTGGATGCGAGCTATGAAGCAAGAAAGTTCTCCATGGCTGAGGTGAGCTTTATGATCGAGCTAGCTCTTATAGTTGAGCTTGGATATGGTCAACTCAAAAGTTCGGAGGTGATGACCTTCCTTCATGATAGCTCATCCTTTAGGCTTACGCGAGCTCTCTCATGGGAGCTTGCGTTTAGGTTGAGGGTTACACTAACTCTCTCATGGGAGCTACATTTACGCCAAGGTGAGTTTCGTCTAGATAGCTCATCCTTTAGGCTTATGCGAGCTCTCTCATGGGGCTTGCATTTAGGTCGAGGCGAGCTTTATTGTGATACCTCATCCTTTAGGCTTATGCTAGCTCTCTCATGGGAGCTTGCGGTTAGGTCGAGGGAGGTCATTATTGAGGTCGAGGTGAGCTACCTGATAGCTATCAAGTGGGAGCTCATCCTTGATGTTCAAGATGAGCTATTATGA

Protein sequence

MNPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSPGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRGEPAEEVESVPLTAEDRRVNIGTKLGSTSPGSTSLVDASYEARKFSMAEVSFMIELALIVELGYGQLKSSEVMTFLHDSSSFRLTRALSWELAFRLRVTLTLSWELHLRQGEFRLDSSSFRLMRALSWGLHLGRGELYCDTSSFRLMLALSWELAVRSREVIIEVEVSYLIAIKWELILDVQDELL
Homology
[Close]
BLAST of Moc02g12460 vs. NCBI nr
Match: XP_022156571.1 (uncharacterized protein LOC111023448 [Momordica charantia])

HSP 1 Score: 255.4 bits (651), Expect = 6.0e-64
Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MNPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPS 60
           MNPDESHRCFE KSLK+AADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPS
Sbjct: 1   MNPDESHRCFEEKSLKKAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPS 60

Query: 61  PGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRGEPAEEVESVPLTAED 120
           PGYRLNPTTLDKG PVAGLIKATDLSG+ RPSPGHRLNSTTLDRGEPAEEVESVPLTAED
Sbjct: 61  PGYRLNPTTLDKGGPVAGLIKATDLSGDARPSPGHRLNSTTLDRGEPAEEVESVPLTAED 120

Query: 121 RRVNIGTKLGS 132
           RRVNIGTKLGS
Sbjct: 121 RRVNIGTKLGS 131

[Close]
BLAST of Moc02g12460 vs. NCBI nr
Match: XP_022156048.1 (uncharacterized protein LOC111023016 [Momordica charantia])

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-17
Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 73  GEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRGEPAEEVESVPLTAEDRRVNIGTKLGS 132
           GEPV GL KATDLSGE RPSPGHRLNSTTLDRG  AEEVESVPLT E++RVNIGTKLG+
Sbjct: 33  GEPVTGLNKATDLSGEARPSPGHRLNSTTLDRGGSAEEVESVPLTVEEQRVNIGTKLGN 91

[Close]
BLAST of Moc02g12460 vs. NCBI nr
Match: XP_022158042.1 (uncharacterized protein LOC111024621 [Momordica charantia])

HSP 1 Score: 94.0 bits (232), Expect = 2.3e-15
Identity = 58/135 (42.96%), Postives = 73/135 (54.07%), Query Frame = 0 

Query: 2   NPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSP 61
           NP E  +CFE +SL+ AA+ L E  PSPD Q NPTT D GEPV G+              
Sbjct: 7   NP-EGQQCFEEESLEVAANGLGEICPSPDHQPNPTTFDKGEPVGGVESI----------- 66

Query: 62  GYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRGEPAEEVESVPLTAEDR 121
                        P+    +A D  GE+  SP    + T  DRGEP +EVES+PLT++DR
Sbjct: 67  -------------PLTPGDRAVDGLGEICSSPDQLPSPTIFDRGEPTKEVESIPLTSDDR 116

Query: 122 RVNIGTKLGSTSPGS 137
           RVNIGT+LG+    S
Sbjct: 127 RVNIGTRLGNKKRAS 116

[Close]
BLAST of Moc02g12460 vs. ExPASy TrEMBL
Match: A0A6J1DVC6 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 2.9e-64
Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MNPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPS 60
           MNPDESHRCFE KSLK+AADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPS
Sbjct: 1   MNPDESHRCFEEKSLKKAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPS 60

Query: 61  PGYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRGEPAEEVESVPLTAED 120
           PGYRLNPTTLDKG PVAGLIKATDLSG+ RPSPGHRLNSTTLDRGEPAEEVESVPLTAED
Sbjct: 61  PGYRLNPTTLDKGGPVAGLIKATDLSGDARPSPGHRLNSTTLDRGEPAEEVESVPLTAED 120

Query: 121 RRVNIGTKLGS 132
           RRVNIGTKLGS
Sbjct: 121 RRVNIGTKLGS 131

[Close]
BLAST of Moc02g12460 vs. ExPASy TrEMBL
Match: A0A6J1DPJ5 (uncharacterized protein LOC111023016 OS=Momordica charantia OX=3673 GN=LOC111023016 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.4e-18
Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 73  GEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRGEPAEEVESVPLTAEDRRVNIGTKLGS 132
           GEPV GL KATDLSGE RPSPGHRLNSTTLDRG  AEEVESVPLT E++RVNIGTKLG+
Sbjct: 33  GEPVTGLNKATDLSGEARPSPGHRLNSTTLDRGGSAEEVESVPLTVEEQRVNIGTKLGN 91

[Close]
BLAST of Moc02g12460 vs. ExPASy TrEMBL
Match: A0A6J1DW49 (uncharacterized protein LOC111024621 OS=Momordica charantia OX=3673 GN=LOC111024621 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-15
Identity = 58/135 (42.96%), Postives = 73/135 (54.07%), Query Frame = 0 

Query: 2   NPDESHRCFEAKSLKEAADHLDEARPSPDRQLNPTTLDGGEPVSGLNKATDLSGKARPSP 61
           NP E  +CFE +SL+ AA+ L E  PSPD Q NPTT D GEPV G+              
Sbjct: 7   NP-EGQQCFEEESLEVAANGLGEICPSPDHQPNPTTFDKGEPVGGVESI----------- 66

Query: 62  GYRLNPTTLDKGEPVAGLIKATDLSGEVRPSPGHRLNSTTLDRGEPAEEVESVPLTAEDR 121
                        P+    +A D  GE+  SP    + T  DRGEP +EVES+PLT++DR
Sbjct: 67  -------------PLTPGDRAVDGLGEICSSPDQLPSPTIFDRGEPTKEVESIPLTSDDR 116

Query: 122 RVNIGTKLGSTSPGS 137
           RVNIGT+LG+    S
Sbjct: 127 RVNIGTRLGNKKRAS 116

The following BLAST results are available for this feature:
BLAST of Moc02g12460 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156571.16.0e-6496.18uncharacterized protein LOC111023448 [Momordica charantia][more]
XP_022156048.11.1e-1784.75uncharacterized protein LOC111023016 [Momordica charantia][more]
XP_022158042.12.3e-1542.96uncharacterized protein LOC111024621 [Momordica charantia][more]
BLAST of Moc02g12460 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc02g12460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DVC62.9e-6496.18Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023448 PE=4 SV=1[more]
A0A6J1DPJ55.4e-1884.75uncharacterized protein LOC111023016 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DW491.1e-1542.96uncharacterized protein LOC111024621 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
BLAST of Moc02g12460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc02g12460.1Moc02g12460.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity