Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCGGCGGGTCGCGGCGGGCAAGCCCAGCCTTAGCGACGTCGTGTTGGCCGACGAAGATCAGATTCTGATCACCAATCAGATTCGAGCCCAATTCGATTCCATCGCACCCAAGCGTCCCACGAAACCGAGCAGAAGCGAACCCGATTCGTCCCCACAAAACCCACCTCAAGAGATCGCCTCACAACAGGCCATTCCCGAGCTCAACAAGCTCCTAAATCTCCAGTCCCAGTCTCATGTGGGCTTCGATTTTACCCCTCTTTTTTTTTTCTTCATTTCTGCGGAATCTTGATCTGGGTTTGATTTTTTAGAAATTTTTAGTTACAGGGTTTGCACTTGGGGGAGGGGGATTCGTTGCTGGTGCAGGAGGAGTATGTGGAGACGCAGTATTACAAGGAGTTGGATTCAGTCGAGAAACGGCATCACAAGGTTTGTTCTGTTTCCATCTTTTTCTTGAAATTAAAATTTGTTGGGTGTTTGATGAAATTGATTGTGTTCATTGAATTGGAAATTGGAGCTGGAAGCAGACGGGGGAGTGGGTTCATACAGGTGGGGATTGAAGGAGGAGAAAATGAAAGTATTGAAACTGGATTTATTGATGGTGCAAATGGGAGAGTTCATTTTCATGGAGGATATAAAAGCAATCCTGCAACTAATGACTGGCTACCAAAAATTGGTAGTGATGATCATCTGATCTTCAAATCCCAGAAGCTCAATCGAAGTGAAGCTTAA
mRNA sequence
ATGGCGCGGCGGGTCGCGGCGGGCAAGCCCAGCCTTAGCGACGTCGTGTTGGCCGACGAAGATCAGATTCTGATCACCAATCAGATTCGAGCCCAATTCGATTCCATCGCACCCAAGCGTCCCACGAAACCGAGCAGAAGCGAACCCGATTCGTCCCCACAAAACCCACCTCAAGAGATCGCCTCACAACAGGCCATTCCCGAGCTCAACAAGCTCCTAAATCTCCAGTCCCAGTCTCATGGTTTGCACTTGGGGGAGGGGGATTCGTTGCTGGTGCAGGAGGAGTATGTGGAGACGCAGTATTACAAGGAGTTGGATTCAGTCGAGAAACGGCATCACAAGGTTTGTTCTGTTTCCATCTTTTTCTTGAAATTAAAATTTGTTGGGTGTTTGATGAAATTGATTGTGTTCATTGAATTGGAAATTGGAGCTGGAAGCAGACGGGGGAGTGGGTTCATACAGGTGGGGATTGAAGGAGGAGAAAATGAAAGTATTGAAACTGGATTTATTGATGGTGCAAATGGGAGAGTTCATTTTCATGGAGGATATAAAAGCAATCCTGCAACTAATGACTGGCTACCAAAAATTGGTAGTGATGATCATCTGATCTTCAAATCCCAGAAGCTCAATCGAAGTGAAGCTTAA
Coding sequence (CDS)
ATGGCGCGGCGGGTCGCGGCGGGCAAGCCCAGCCTTAGCGACGTCGTGTTGGCCGACGAAGATCAGATTCTGATCACCAATCAGATTCGAGCCCAATTCGATTCCATCGCACCCAAGCGTCCCACGAAACCGAGCAGAAGCGAACCCGATTCGTCCCCACAAAACCCACCTCAAGAGATCGCCTCACAACAGGCCATTCCCGAGCTCAACAAGCTCCTAAATCTCCAGTCCCAGTCTCATGGTTTGCACTTGGGGGAGGGGGATTCGTTGCTGGTGCAGGAGGAGTATGTGGAGACGCAGTATTACAAGGAGTTGGATTCAGTCGAGAAACGGCATCACAAGGTTTGTTCTGTTTCCATCTTTTTCTTGAAATTAAAATTTGTTGGGTGTTTGATGAAATTGATTGTGTTCATTGAATTGGAAATTGGAGCTGGAAGCAGACGGGGGAGTGGGTTCATACAGGTGGGGATTGAAGGAGGAGAAAATGAAAGTATTGAAACTGGATTTATTGATGGTGCAAATGGGAGAGTTCATTTTCATGGAGGATATAAAAGCAATCCTGCAACTAATGACTGGCTACCAAAAATTGGTAGTGATGATCATCTGATCTTCAAATCCCAGAAGCTCAATCGAAGTGAAGCTTAA
Protein sequence
MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEIASQQAIPELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKVCSVSIFFLKLKFVGCLMKLIVFIELEIGAGSRRGSGFIQVGIEGGENESIETGFIDGANGRVHFHGGYKSNPATNDWLPKIGSDDHLIFKSQKLNRSEA
Homology
BLAST of Moc02g12300 vs. NCBI nr
Match:
XP_038901917.1 (uncharacterized protein LOC120088588 [Benincasa hispida])
HSP 1 Score: 221.9 bits (564), Expect = 5.4e-54
Identity = 134/217 (61.75%), Postives = 147/217 (67.74%), Query Frame = 0
Query: 2 ARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEIA 61
ARR A KPS SDVVL DE+Q+ IT+QIRAQFDS APKRP KPSRSE DSSPQN P I
Sbjct: 50 ARRSTASKPSRSDVVLCDEEQMRITDQIRAQFDSTAPKRPMKPSRSESDSSPQN-PSGIN 109
Query: 62 SQQAIPELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKVCSVSIF 121
S +AIPEL+KL NLQSQSH L LG GDS LVQE+YVET+YYKEL+S+EKRHHK
Sbjct: 110 SVEAIPELDKLRNLQSQSHVLRLGVGDS-LVQEDYVETEYYKELNSIEKRHHKT------ 169
Query: 122 FLKLKFVGCLMKLIVFIELEIGAGSRRGSGFIQVGIEGGEN----ESIETGFIDGANGRV 181
GSGFIQVG EGG+N + ET FID ANGRV
Sbjct: 170 ---------------------------GSGFIQVGNEGGQNGVHVNNTETEFIDVANGRV 229
Query: 182 HFHGGYKSNPATNDWLPKIGSDDH-LIFKSQKLNRSE 214
H HGGYK NPATNDWLP DDH LIF+S+K NRSE
Sbjct: 230 HLHGGYKGNPATNDWLPNF--DDHDLIFRSRKPNRSE 229
BLAST of Moc02g12300 vs. NCBI nr
Match:
XP_022149507.1 (uncharacterized protein LOC111017922 isoform X2 [Momordica charantia])
HSP 1 Score: 219.5 bits (558), Expect = 2.7e-53
Identity = 114/115 (99.13%), Postives = 115/115 (100.00%), Query Frame = 0
Query: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI
Sbjct: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
Query: 61 ASQQAIPELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKV 116
ASQQAIPELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHK+
Sbjct: 61 ASQQAIPELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKL 115
BLAST of Moc02g12300 vs. NCBI nr
Match:
XP_022149506.1 (uncharacterized protein LOC111017922 isoform X1 [Momordica charantia])
HSP 1 Score: 214.5 bits (545), Expect = 8.7e-52
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 0
Query: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI
Sbjct: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
Query: 61 ASQQAIPELNKLLNLQSQSH--GLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKV 116
ASQQAIPELNKLLNLQSQSH GLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHK+
Sbjct: 61 ASQQAIPELNKLLNLQSQSHLQGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKL 117
BLAST of Moc02g12300 vs. NCBI nr
Match:
XP_022149508.1 (uncharacterized protein LOC111017922 isoform X3 [Momordica charantia])
HSP 1 Score: 214.5 bits (545), Expect = 8.7e-52
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 0
Query: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI
Sbjct: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
Query: 61 ASQQAIPELNKLLNLQSQSH--GLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHK 115
ASQQAIPELNKLLNLQSQSH GLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHK
Sbjct: 61 ASQQAIPELNKLLNLQSQSHLQGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHK 116
BLAST of Moc02g12300 vs. NCBI nr
Match:
XP_023512644.1 (uncharacterized protein LOC111777334 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 206.8 bits (525), Expect = 1.8e-49
Identity = 131/215 (60.93%), Postives = 142/215 (66.05%), Query Frame = 0
Query: 2 ARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSR--SEPDSSPQNPPQE 61
ARR A KPS SDVVL +E+Q+ IT+QIRAQFDSIAPKRP KPSR SE DSS QNP
Sbjct: 3 ARRCTASKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQNPSGS 62
Query: 62 IASQQAIPELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKVCSVS 121
A ++AIPEL+KL NLQ+QSH L LG GDS LVQEEYVET+YYKELDS+EKRHHK
Sbjct: 63 TA-EEAIPELDKLRNLQTQSHVLALGVGDS-LVQEEYVETEYYKELDSIEKRHHKT---- 122
Query: 122 IFFLKLKFVGCLMKLIVFIELEIGAGSRRGSGFIQVGIEGGENESIETGFIDGA-NGRVH 181
GSGFIQVG EGG N + T FID A GRVH
Sbjct: 123 -----------------------------GSGFIQVGKEGGGN-VVHTQFIDAATGGRVH 180
Query: 182 FHGGYKSNPATNDWLPKIGSDDHLIFKSQKLNRSE 214
HGGYK NPATNDWLP D LIFKSQK NRSE
Sbjct: 183 LHGGYKGNPATNDWLPTF-DDRDLIFKSQKPNRSE 180
BLAST of Moc02g12300 vs. ExPASy TrEMBL
Match:
A0A6J1D859 (uncharacterized protein LOC111017922 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017922 PE=4 SV=1)
HSP 1 Score: 219.5 bits (558), Expect = 1.3e-53
Identity = 114/115 (99.13%), Postives = 115/115 (100.00%), Query Frame = 0
Query: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI
Sbjct: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
Query: 61 ASQQAIPELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKV 116
ASQQAIPELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHK+
Sbjct: 61 ASQQAIPELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKL 115
BLAST of Moc02g12300 vs. ExPASy TrEMBL
Match:
A0A6J1D8K6 (uncharacterized protein LOC111017922 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017922 PE=4 SV=1)
HSP 1 Score: 214.5 bits (545), Expect = 4.2e-52
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 0
Query: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI
Sbjct: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
Query: 61 ASQQAIPELNKLLNLQSQSH--GLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKV 116
ASQQAIPELNKLLNLQSQSH GLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHK+
Sbjct: 61 ASQQAIPELNKLLNLQSQSHLQGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKL 117
BLAST of Moc02g12300 vs. ExPASy TrEMBL
Match:
A0A6J1D6Z5 (uncharacterized protein LOC111017922 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111017922 PE=4 SV=1)
HSP 1 Score: 214.5 bits (545), Expect = 4.2e-52
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 0
Query: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI
Sbjct: 1 MARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEI 60
Query: 61 ASQQAIPELNKLLNLQSQSH--GLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHK 115
ASQQAIPELNKLLNLQSQSH GLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHK
Sbjct: 61 ASQQAIPELNKLLNLQSQSHLQGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHK 116
BLAST of Moc02g12300 vs. ExPASy TrEMBL
Match:
A0A5A7SQ48 (Maternal effect embryo arrest 59, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00100 PE=4 SV=1)
HSP 1 Score: 204.1 bits (518), Expect = 5.7e-49
Identity = 125/217 (57.60%), Postives = 142/217 (65.44%), Query Frame = 0
Query: 2 ARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEIA 61
A R A KPS SD+VL +E+Q+ IT+QIRAQFDSIAPKRP KPSRSE DS +N P
Sbjct: 3 APRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESDSLTEN-PSGFT 62
Query: 62 SQQAIPELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKVCSVSIF 121
S++AIPEL+K NLQSQSH L LG+GD LVQE+Y+ET+YYKELDS+EKRHHK
Sbjct: 63 SEKAIPELDKFRNLQSQSHALRLGDGD-CLVQEDYLETEYYKELDSIEKRHHKT------ 122
Query: 122 FLKLKFVGCLMKLIVFIELEIGAGSRRGSGFIQVGIEGGE----NESIETGFI-DGANGR 181
GSGFIQVG EGGE N++ FI D ANGR
Sbjct: 123 ---------------------------GSGFIQVGNEGGENGVHNQNKPHEFINDVANGR 182
Query: 182 VHFHGGYKSNPATNDWLPKIGSDDHLIFKSQKLNRSE 214
VH HGGYK NPATNDWLPK D LIF+SQK NRSE
Sbjct: 183 VHHHGGYKGNPATNDWLPKF-DDRDLIFRSQKPNRSE 183
BLAST of Moc02g12300 vs. ExPASy TrEMBL
Match:
A0A1S3C2G8 (uncharacterized protein LOC103495913 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495913 PE=4 SV=1)
HSP 1 Score: 204.1 bits (518), Expect = 5.7e-49
Identity = 125/217 (57.60%), Postives = 142/217 (65.44%), Query Frame = 0
Query: 2 ARRVAAGKPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEIA 61
A R A KPS SD+VL +E+Q+ IT+QIRAQFDSIAPKRP KPSRSE DS +N P
Sbjct: 3 APRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESDSLTEN-PSGFT 62
Query: 62 SQQAIPELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKVCSVSIF 121
S++AIPEL+K NLQSQSH L LG+GD LVQE+Y+ET+YYKELDS+EKRHHK
Sbjct: 63 SEKAIPELDKFRNLQSQSHALRLGDGD-CLVQEDYLETEYYKELDSIEKRHHKT------ 122
Query: 122 FLKLKFVGCLMKLIVFIELEIGAGSRRGSGFIQVGIEGGE----NESIETGFI-DGANGR 181
GSGFIQVG EGGE N++ FI D ANGR
Sbjct: 123 ---------------------------GSGFIQVGNEGGENGVHNQNKPHEFINDVANGR 182
Query: 182 VHFHGGYKSNPATNDWLPKIGSDDHLIFKSQKLNRSE 214
VH HGGYK NPATNDWLPK D LIF+SQK NRSE
Sbjct: 183 VHHHGGYKGNPATNDWLPKF-DDRDLIFRSQKPNRSE 183
BLAST of Moc02g12300 vs. TAIR 10
Match:
AT4G37300.1 (maternal effect embryo arrest 59 )
HSP 1 Score: 119.4 bits (298), Expect = 3.5e-27
Identity = 86/212 (40.57%), Postives = 110/212 (51.89%), Query Frame = 0
Query: 9 KPSLSDVVLADEDQILITNQIRAQFDSIAPKRPTKPSRSEPDSSPQNPPQEIASQQAI-- 68
KPS SD + E QI NQIRA FDS+APKRPTKP+RSEP P ++ I
Sbjct: 5 KPSRSDEISDPEQQIKNANQIRADFDSLAPKRPTKPTRSEPGF-----PGSFSASDKITD 64
Query: 69 -PELNKLLNLQSQSHGLHLGEGDSLLVQEEYVETQYYKELDSVEKRHHKVCSVSIFFLKL 128
PE +K +LQSQ+HG LGEGDS VQ+E++ET+YY L +++K+HH
Sbjct: 65 HPEADKFQSLQSQTHGKVLGEGDSSAVQDEFLETEYYSNLTAIDKQHHTT---------- 124
Query: 129 KFVGCLMKLIVFIELEIGAGSRRGSGFIQVGIE--GGENESIETGFI-DGANGRVHFHGG 188
GSGFI V E G E+E++ I DG V
Sbjct: 125 -----------------------GSGFINVVKEDNGEESEAVTAAAIGDGGEKAV----- 172
Query: 189 YKSNPATNDWLPKIGSDDHLIFKSQKLNRSEA 215
Y+SNPATN+W+P +D S K NRSE+
Sbjct: 185 YRSNPATNEWIPAT-EEDFDSESSSKPNRSES 172
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038901917.1 | 5.4e-54 | 61.75 | uncharacterized protein LOC120088588 [Benincasa hispida] | [more] |
XP_022149507.1 | 2.7e-53 | 99.13 | uncharacterized protein LOC111017922 isoform X2 [Momordica charantia] | [more] |
XP_022149506.1 | 8.7e-52 | 97.44 | uncharacterized protein LOC111017922 isoform X1 [Momordica charantia] | [more] |
XP_022149508.1 | 8.7e-52 | 98.28 | uncharacterized protein LOC111017922 isoform X3 [Momordica charantia] | [more] |
XP_023512644.1 | 1.8e-49 | 60.93 | uncharacterized protein LOC111777334 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1D859 | 1.3e-53 | 99.13 | uncharacterized protein LOC111017922 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1D8K6 | 4.2e-52 | 97.44 | uncharacterized protein LOC111017922 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1D6Z5 | 4.2e-52 | 98.28 | uncharacterized protein LOC111017922 isoform X3 OS=Momordica charantia OX=3673 G... | [more] |
A0A5A7SQ48 | 5.7e-49 | 57.60 | Maternal effect embryo arrest 59, putative isoform 1 OS=Cucumis melo var. makuwa... | [more] |
A0A1S3C2G8 | 5.7e-49 | 57.60 | uncharacterized protein LOC103495913 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |
AT4G37300.1 | 3.5e-27 | 40.57 | maternal effect embryo arrest 59 | [more] |