Moc02g11910 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g11910
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	S5 DRBM domain-containing protein
Location	chr2: 8604259 .. 8607768 (+)
RNA-Seq Expression	Moc02g11910
Synteny	Moc02g11910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCCCGTCTCATTCTCAGCCAGGTCGTGCAAAACCCTACTAAAACCCCACTGCATATTACCCGGAATATCTCCAATTTGCGGCGGTTCCCGTTCGAGGAGATACCCAAGTTCTCCTTTTCAGGGGCGGCTCGTTACTCCACCGCTTCGGCCAGAGTTGTGCAGGATCTTCTCGCTGAGGTGGAGAAAGAGAAGCAGAGAGAAAGGGAGCAGCGGAGAAGGGCCGGTCTCGATACTAAGGATATTGACGATGAGGATCAGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAGCTAAAGGATACTGGGGACTTGAACGCGTATGAAGAGCCCACTGATTCTGATAGTGATGAAGATGACGAAAGATTCAGCCCTGAATCTGTCAAAGAGAGGTTTGATAAGTTTGAGAGGAAATTCAAGAGGCACGAGGAATTGCTCAAGCACTTCACTGAGTCTGGTATGACCATTTGTATTGGAGATTGTTTCCATTTTATACTTATATTTTTCGTCTATGGAAGGATTTCGGGAATTCGTAGCGGTTAAAACTGTTGTAGGACTCCAGATATAGCTAGTCTCATTCTCTATTTTTTGTTTTTTCGTCCTTTGATACTTGATACAATAGATTAACAGGCAGCTTAAACTTTTCATAACGTTCTCCATGCATGTAACGAAACATGAACATATGTATCAGAAATGTCGGAAGAAATCAGCAGTTGTTAACCATTACCATTATTCGATCTTAACATAGGAAGTTGAATGCATGTATTTAATTTATTCGGAGCTATTAGAGCGGGATCCACTTTTTAGGGAATATGGGTTGAAGCAATAACAAGAATCTTTGAGTGGAACGAGAATATCTCGATAACCTAAGTCCGCTCACTGTCTCTTATTTTCTGTTCTCATCACCAAAAGAAAGTGCATTTGAACAAACTTTTAATTTTTGTATATTTTGGACCCGTGTTAAAATCTGCCCACATCTCCAACATGTTTTTTACAGAAAACATGGATGATGCTTTCAAATGGATGAATAAAATTGACAAGTTTGAGCAAAAGCACTTCGGGCTTCGTCCTGAATATCGAGTAATTGGTGAATTAATGAATCGCTTGAAAGTAGCAGAGGGCAAGGAAAAGTTCATTCTTCAACAAAAGTTGAATAGGGCTATGAGATTAGTGGAGTGGAAGGAAGCTTATGATCCAAACAATCCTGCCAACTATGGAGTAATTCAACAAGAACAAGTAGGATCATCAGTTGATCTCCTGGAGCAATCAGGATTTGCAAAAGAGAAGCAAATCATACAAGGAGCTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATTCTACTGGAGAAGCTTAATGCTATCGATAAGAAACTTGAAGAGAAGCTAGCAGAGCTTGATCATACTTTTGGAAAGAAAGGGAAGGTTTTAGAAGAAGAGATTCGAGATCTTGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAAAGAAGACCCCTTTATCGAAAAGTAAGTTAACCCACTTTGTCTTCCCCTGTCTTTTTTTGGCAATTTATAGTTTTCAACTAAGTTTCTGGATTGAATGGTAGCTAAATTTTTCTTTGTTATCTAATTTCATTGTCCTGCACAAGTATCTGAAGGTCTAAGTTGTCAATTTTGCTTATTCCCTAGTATCTGACAGAACTGTTAGATTTTGGGGAGTTTATGTTTATTTTTCTTAGATATTTATGTTGTATGTATTTTTTTGCTAAGGTTAAAGCAAAATATTTGTAAACAGTTTAAAAAGGACCTTCTTGATTTCTGATTTGAGGCCTCTGGCATTTTTTCTGACACAGAAAATTCTTTTGTAATTACTAATTACAGCCTCTCTATGATTTTGCAAGATTGGAGCTTATGTAGTTCCTGGGAGGGGAATCCCTCTTCCCCCTGCCCTTAGTCTGTTGCTTCCTTTTGTGCTTTTAATCAAAGGTTTCTTATAAAAAAAAAAGGCATTTTTTCTGACGTTGTTCCTTTACCATGTTTTGAAAAAGACAAAAATAAAAGAGCCATGTTTCTGGCAACGAATATGGTTTAATACTGAAAATGTTCAACTAAAGTGTAACTTCTCATTATTTGTAATTAAACTAGATTATTGCTTAACATTTTTATAATTGCATTCAGCAAACTTATAAGTGGCTCCATGGAGACGCATGGGAAGTACGCTTTTGTTTATGGGAGCAACCGGTTATTCTTGAAAGTATCATTGATCTAGAAATCTGGAGACATTTTATCATAGACAGGTTTAATAAGATGCAATTGTGATGCATTTTGATAGTATATAATGTGGGTGAATCTCATCTTTTAGTTTTCATCGTTACTTTCTCGAAATGAGATTACAAATTTTCCTTGTCTGTATCATATAATTACACTTCTATAATTATAGTTTATGAAATTTTTCGTATTTCATTTTTTTAAAATATTAATTCCAATGGTTACAAAATGATGGCATGGCAGGGCTTTGATGTGAAATTAATTGATGTGAACAGAACTTGTAAAGTTACAAAGGTATGCAACCACCCTTCTAAATATTACTATCCAAATAAATATTTATTTGATGATTGTAAGCTTTGTACAATCTAGGGTGGACAAGTTGTCAAATACACTGCTCTCTTGGCTTGTGGGAACTATCATGGAATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGTACCGATTGCTTTACAAAAGGCATGTTCTTGTGCTATTAGCAGACTCGGTTGTAATTCCTCATTATTTTTTGTTTTATTGAAATTTGAAATTTTAATACGATACTTTTAAGTTCTAGTTATAGAATAATACAGAGTGAAAATTTAATTTTTAAGGTATACTAGGAGTCTTATAAAAAAGGTATGCTATGAGTATGTTTTGCTTGAGTTGGTTTGGAAAATATTTAGCTAGGTTTAAATTGAAATCCAGTTGTCAATAGATGGAAGCCTGTGGATTCATCTATGTAAATGAGATAGAAATTGAATATGTTGTGTAGCCAAAGTGAGAGATACAAAAAGTTGTTTGTCTTTTCTTTTTTTCTCTCACTCCTCTAGGAGTTTGTAGTTGTTGAATTGAAACCATGTAAAATTTTGAAATAGGCTTCTTTTAACTTCCCTTGTAAAAAGAACATTTTTGACATCCTACTATTGCCTCGTAAAAAAAGACATCCTACTAATCATTAAAAAAAAAAAGACATCCTAAATTCCAATAATGCCATTTATATATTGTTGAGGTACGCATCATATTAGATGACTTTTGTAGTCTATCTCATAGTCTCATATGTGAGTAAGATTATGGCTATAGTCTATCTCATAGTTAAGTCTTATCTTCTATACTCTTTTGGAGTCCTCTTGCTGCCCAAATTCTTATTAGTGGTAGTCGTCTTCATTGGCTTCTTGACAGAGGCAAGGAAGAAGGGCTAAATAG

mRNA sequence

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCCCGTCTCATTCTCAGCCAGGTCGTGCAAAACCCTACTAAAACCCCACTGCATATTACCCGGAATATCTCCAATTTGCGGCGGTTCCCGTTCGAGGAGATACCCAAGTTCTCCTTTTCAGGGGCGGCTCGTTACTCCACCGCTTCGGCCAGAGTTGTGCAGGATCTTCTCGCTGAGGTGGAGAAAGAGAAGCAGAGAGAAAGGGAGCAGCGGAGAAGGGCCGGTCTCGATACTAAGGATATTGACGATGAGGATCAGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAGCTAAAGGATACTGGGGACTTGAACGCGTATGAAGAGCCCACTGATTCTGATAGTGATGAAGATGACGAAAGATTCAGCCCTGAATCTGTCAAAGAGAGGTTTGATAAGTTTGAGAGGAAATTCAAGAGGCACGAGGAATTGCTCAAGCACTTCACTGAGTCTGAAAACATGGATGATGCTTTCAAATGGATGAATAAAATTGACAAGTTTGAGCAAAAGCACTTCGGGCTTCGTCCTGAATATCGAGTAATTGGTGAATTAATGAATCGCTTGAAAGTAGCAGAGGGCAAGGAAAAGTTCATTCTTCAACAAAAGTTGAATAGGGCTATGAGATTAGTGGAGTGGAAGGAAGCTTATGATCCAAACAATCCTGCCAACTATGGAGTAATTCAACAAGAACAAGTAGGATCATCAGTTGATCTCCTGGAGCAATCAGGATTTGCAAAAGAGAAGCAAATCATACAAGGAGCTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATTCTACTGGAGAAGCTTAATGCTATCGATAAGAAACTTGAAGAGAAGCTAGCAGAGCTTGATCATACTTTTGGAAAGAAAGGGAAGGTTTTAGAAGAAGAGATTCGAGATCTTGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAAAGAAGACCCCTTTATCGAAAAGGCTTTGATGTGAAATTAATTGATGTGAACAGAACTTGTAAAGTTACAAAGGGTGGACAAGTTGTCAAATACACTGCTCTCTTGGCTTGTGGGAACTATCATGGAATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGTACCGATTGCTTTACAAAAGAGGCAAGGAAGAAGGGCTAAATAG

Coding sequence (CDS)

ATGGTGAACAAATCGCAAGCATTTTCTTGGTCCCGTCTCATTCTCAGCCAGGTCGTGCAAAACCCTACTAAAACCCCACTGCATATTACCCGGAATATCTCCAATTTGCGGCGGTTCCCGTTCGAGGAGATACCCAAGTTCTCCTTTTCAGGGGCGGCTCGTTACTCCACCGCTTCGGCCAGAGTTGTGCAGGATCTTCTCGCTGAGGTGGAGAAAGAGAAGCAGAGAGAAAGGGAGCAGCGGAGAAGGGCCGGTCTCGATACTAAGGATATTGACGATGAGGATCAGGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGAGAAGGAAAAGCTAAAGGATACTGGGGACTTGAACGCGTATGAAGAGCCCACTGATTCTGATAGTGATGAAGATGACGAAAGATTCAGCCCTGAATCTGTCAAAGAGAGGTTTGATAAGTTTGAGAGGAAATTCAAGAGGCACGAGGAATTGCTCAAGCACTTCACTGAGTCTGAAAACATGGATGATGCTTTCAAATGGATGAATAAAATTGACAAGTTTGAGCAAAAGCACTTCGGGCTTCGTCCTGAATATCGAGTAATTGGTGAATTAATGAATCGCTTGAAAGTAGCAGAGGGCAAGGAAAAGTTCATTCTTCAACAAAAGTTGAATAGGGCTATGAGATTAGTGGAGTGGAAGGAAGCTTATGATCCAAACAATCCTGCCAACTATGGAGTAATTCAACAAGAACAAGTAGGATCATCAGTTGATCTCCTGGAGCAATCAGGATTTGCAAAAGAGAAGCAAATCATACAAGGAGCTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATTCTACTGGAGAAGCTTAATGCTATCGATAAGAAACTTGAAGAGAAGCTAGCAGAGCTTGATCATACTTTTGGAAAGAAAGGGAAGGTTTTAGAAGAAGAGATTCGAGATCTTGCAGAGGAGAGAAATTCTTTAACTGAGAAGAAAAGAAGACCCCTTTATCGAAAAGGCTTTGATGTGAAATTAATTGATGTGAACAGAACTTGTAAAGTTACAAAGGGTGGACAAGTTGTCAAATACACTGCTCTCTTGGCTTGTGGGAACTATCATGGAATTGTTGGTTATGCAAAAGCCAAAGGACCTGCAGTACCGATTGCTTTACAAAAGAGGCAAGGAAGAAGGGCTAAATAG

Protein sequence

MVNKSQAFSWSRLILSQVVQNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAARYSTASARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTGDLNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMNKIDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYGVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQKRQGRRAK

Homology

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BLAST of Moc02g11910 vs. NCBI nr
Match: XP_022148602.1 (uncharacterized protein LOC111017222 [Momordica charantia])

HSP 1 Score: 759.2 bits (1959), Expect = 1.8e-215
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILSQVVQNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAARYSTASA 60
           MVNKSQAFSWSRLILSQVVQNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAARYSTASA
Sbjct: 1   MVNKSQAFSWSRLILSQVVQNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAARYSTASA 60

Query: 61  RVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTGDL 120
           RVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTGDL
Sbjct: 61  RVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTGDL 120

Query: 121 NAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMNKI 180
           NAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMNKI
Sbjct: 121 NAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMNKI 180

Query: 181 DKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPANY 240
           DKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPANY
Sbjct: 181 DKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPANY 240

Query: 241 GVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKKLE 300
           GVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKKLE
Sbjct: 241 GVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           GQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK
Sbjct: 361 GQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 395

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BLAST of Moc02g11910 vs. NCBI nr
Match: KAG6571211.1 (hypothetical protein SDJN03_30126, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 687.2 bits (1772), Expect = 8.6e-194
Identity = 363/397 (91.44%), Postives = 380/397 (95.72%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILSQVV-QNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAAR-YSTA 60
           MVNKSQAFSWSRL+L+QVV QNP K+PLHI+R IS L+RFPFEE PK   + A R YSTA
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKSPLHISRKISPLQRFPFEETPK---TPATRCYSTA 60

Query: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTG 120
           SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED+EDYMGVGPLIEKLEKEKLKDTG
Sbjct: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTG 120

Query: 121 DLNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMN 180
           +LNAYEEPTDSDSDEDDERFS ESVK+RFD+FERKFKRHEELLKHFTE++N+DDAFKWM+
Sbjct: 121 NLNAYEEPTDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMS 180

Query: 181 KIDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 240
           KIDKFEQKHF LRPEYRVIGELMNRLKVA+GKEKFILQQKLNRAMRLVEWKEAYDPNNPA
Sbjct: 181 KIDKFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 240

Query: 241 NYGVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKK 300
           NYGVIQ EQVG SVDL+EQSGF KEKQIIQG DDDDEEEFDDMKERDDILLEKLNAIDKK
Sbjct: 241 NYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKK 300

Query: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360
           LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT
Sbjct: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360

Query: 361 KGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           KGGQVVKY+ALLACGNYHGIVGYAKAKGPAVPIALQK
Sbjct: 361 KGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK 394

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BLAST of Moc02g11910 vs. NCBI nr
Match: XP_023512942.1 (uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo] >XP_023512943.1 uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 687.2 bits (1772), Expect = 8.6e-194
Identity = 364/397 (91.69%), Postives = 379/397 (95.47%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILSQVV-QNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAAR-YSTA 60
           MVNKSQAFSWSRL+L+QVV QNP KTPLHI+R IS L+RFPFEE PK   + A R YSTA
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRKISPLQRFPFEETPK---TPATRCYSTA 60

Query: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTG 120
           SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED+EDYMGVGPLIEKLEKEKLKDTG
Sbjct: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTG 120

Query: 121 DLNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMN 180
           +LNAYEE TDSDSDEDDERFS ESVK+RFD+FERKFKRHEELLKHFTE++N+DDAFKWM+
Sbjct: 121 NLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMS 180

Query: 181 KIDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 240
           KIDKFEQKHF LRPEYRVIGELMNRLKVA+GKEKFILQQKLNRAMRLVEWKEAYDPNNPA
Sbjct: 181 KIDKFEQKHFWLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 240

Query: 241 NYGVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKK 300
           NYGVIQ EQVG SVDL+EQSGF KEKQIIQG DDDDEEEFDDMKERDDILLEKLNAIDKK
Sbjct: 241 NYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKK 300

Query: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360
           LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT
Sbjct: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360

Query: 361 KGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           KGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK
Sbjct: 361 KGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 394

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BLAST of Moc02g11910 vs. NCBI nr
Match: XP_022943762.1 (DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata] >XP_022943763.1 DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata])

HSP 1 Score: 684.5 bits (1765), Expect = 5.6e-193
Identity = 362/397 (91.18%), Postives = 379/397 (95.47%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILSQVV-QNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAAR-YSTA 60
           MVNKSQAFSWSRL+L+QVV QNP KTPLHI+R IS L+RFPFEE PK   + A R YSTA
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPK---TPATRCYSTA 60

Query: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTG 120
           SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED+EDYMGVGPLIEKLEKEKLKDTG
Sbjct: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTG 120

Query: 121 DLNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMN 180
           +LNAYEE TDSDSDEDDERFS ESVK+RFD+FERKFKRHEELLKHFTE++N+DDAFKWM+
Sbjct: 121 NLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMS 180

Query: 181 KIDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 240
           KIDKFEQKHF LRPEYRVIGELMNRLK+A+GKEKFILQQKLNRAMRLVEWKEAYDPNNPA
Sbjct: 181 KIDKFEQKHFRLRPEYRVIGELMNRLKMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 240

Query: 241 NYGVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKK 300
           NYGVIQ EQVG SVDL+EQSGF KEKQIIQG DDDDEEEFDDMKERDDILLEKLNAIDKK
Sbjct: 241 NYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKK 300

Query: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360
           LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT
Sbjct: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360

Query: 361 KGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           KGGQVVKY+ALLACGNYHGIVGYAKAKGPAVPIALQK
Sbjct: 361 KGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK 394

[Close]

BLAST of Moc02g11910 vs. NCBI nr
Match: XP_023533655.1 (uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo] >XP_023533656.1 uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 682.9 bits (1761), Expect = 1.6e-192
Identity = 358/396 (90.40%), Postives = 379/396 (95.71%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILSQVV-QNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAARYSTAS 60
           MVNKSQAFSWSRLIL+QVV QNP KTP+HI+R IS+  RFPFEEIPK   S A  YSTAS
Sbjct: 1   MVNKSQAFSWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPK--TSAARCYSTAS 60

Query: 61  ARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTGD 120
           ARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED+EDYMGVGPLIEKLEKEKLKDTG+
Sbjct: 61  ARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGN 120

Query: 121 LNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMNK 180
           LNAYEEP+DSDSDE+DERFS ES+K+RFD+FERKFKRHEELLK+FTE++N++DAFKWM+K
Sbjct: 121 LNAYEEPSDSDSDEEDERFSSESLKKRFDEFERKFKRHEELLKNFTETDNIEDAFKWMSK 180

Query: 181 IDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPAN 240
           IDKFEQKHF LRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPN+PAN
Sbjct: 181 IDKFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNSPAN 240

Query: 241 YGVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKKL 300
           YGVIQ EQVG SVDL+EQSGF KEKQ+IQG DDDDEEEFDDMKERDDILLEKLNAIDKKL
Sbjct: 241 YGVIQHEQVGPSVDLMEQSGFEKEKQMIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKL 300

Query: 301 EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTK 360
           EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTK
Sbjct: 301 EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTK 360

Query: 361 GGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           GGQV+KYTALLACGNYHGIVGYAKAKGPAVPIALQK
Sbjct: 361 GGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQK 394

[Close]

BLAST of Moc02g11910 vs. ExPASy Swiss-Prot
Match: Q1R0F8 (30S ribosomal protein S5 OS=Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11) OX=290398 GN=rpsE PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 341 RKGFDV--KLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQKR-- 400
           +KG D+  KL+ VNR  KV KGG++  +TAL   G+  G VG+ + K   VP+A+QK   
Sbjct: 6   QKGGDLQEKLVQVNRVAKVVKGGRIFGFTALTVVGDGSGRVGFGRGKAREVPVAIQKAMD 65

[Close]

BLAST of Moc02g11910 vs. ExPASy Swiss-Prot
Match: Q2S929 (30S ribosomal protein S5 OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=rpsE PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.8e-05
Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 347 KLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           KL+ VNR  KV KGG++  +TAL   G+ +G VG+ + K   VP+A+QK
Sbjct: 15  KLVQVNRVAKVVKGGRIFGFTALTVVGDGNGKVGFGRGKAREVPVAIQK 63

[Close]

BLAST of Moc02g11910 vs. ExPASy Swiss-Prot
Match: Q0VSI6 (30S ribosomal protein S5 OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) OX=393595 GN=rpsE PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.4e-05
Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 342 KGFDVKLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           +G   KL+ VNR  KV KGG++  +TAL   G+  G VG+ + K   VP A+QK
Sbjct: 10  EGLQEKLVQVNRVAKVVKGGRIFGFTALTVVGDGKGKVGFGRGKAREVPAAIQK 63

[Close]

BLAST of Moc02g11910 vs. ExPASy Swiss-Prot
Match: Q5X842 (30S ribosomal protein S5 OS=Legionella pneumophila (strain Paris) OX=297246 GN=rpsE PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.4e-05
Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 343 GFDVKLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQKRQGRRAK 402
           G+  KL+ V RT KV KGG+V  +  L+  G+  G VG+ + K   VPIA+QK   +  K
Sbjct: 11  GYQEKLVSVTRTAKVVKGGRVFGFAVLVVVGDGKGKVGFGRGKAREVPIAIQKAMDQAKK 70

[Close]

BLAST of Moc02g11910 vs. ExPASy Swiss-Prot
Match: A5IHP7 (30S ribosomal protein S5 OS=Legionella pneumophila (strain Corby) OX=400673 GN=rpsE PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.4e-05
Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 343 GFDVKLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQKRQGRRAK 402
           G+  KL+ V RT KV KGG+V  +  L+  G+  G VG+ + K   VPIA+QK   +  K
Sbjct: 11  GYQEKLVSVTRTAKVVKGGRVFGFAVLVVVGDGKGKVGFGRGKAREVPIAIQKAMDQAKK 70

[Close]

BLAST of Moc02g11910 vs. ExPASy TrEMBL
Match: A0A6J1D5I3 (uncharacterized protein LOC111017222 OS=Momordica charantia OX=3673 GN=LOC111017222 PE=3 SV=1)

HSP 1 Score: 759.2 bits (1959), Expect = 8.6e-216
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILSQVVQNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAARYSTASA 60
           MVNKSQAFSWSRLILSQVVQNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAARYSTASA
Sbjct: 1   MVNKSQAFSWSRLILSQVVQNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAARYSTASA 60

Query: 61  RVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTGDL 120
           RVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTGDL
Sbjct: 61  RVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTGDL 120

Query: 121 NAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMNKI 180
           NAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMNKI
Sbjct: 121 NAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMNKI 180

Query: 181 DKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPANY 240
           DKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPANY
Sbjct: 181 DKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPANY 240

Query: 241 GVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKKLE 300
           GVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKKLE
Sbjct: 241 GVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKKLE 300

Query: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360
           EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG
Sbjct: 301 EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKG 360

Query: 361 GQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           GQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK
Sbjct: 361 GQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 395

[Close]

BLAST of Moc02g11910 vs. ExPASy TrEMBL
Match: A0A6J1FXC7 (DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC111448419 PE=3 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.7e-193
Identity = 362/397 (91.18%), Postives = 379/397 (95.47%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILSQVV-QNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAAR-YSTA 60
           MVNKSQAFSWSRL+L+QVV QNP KTPLHI+R IS L+RFPFEE PK   + A R YSTA
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPK---TPATRCYSTA 60

Query: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTG 120
           SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED+EDYMGVGPLIEKLEKEKLKDTG
Sbjct: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTG 120

Query: 121 DLNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMN 180
           +LNAYEE TDSDSDEDDERFS ESVK+RFD+FERKFKRHEELLKHFTE++N+DDAFKWM+
Sbjct: 121 NLNAYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMS 180

Query: 181 KIDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 240
           KIDKFEQKHF LRPEYRVIGELMNRLK+A+GKEKFILQQKLNRAMRLVEWKEAYDPNNPA
Sbjct: 181 KIDKFEQKHFRLRPEYRVIGELMNRLKMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 240

Query: 241 NYGVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKK 300
           NYGVIQ EQVG SVDL+EQSGF KEKQIIQG DDDDEEEFDDMKERDDILLEKLNAIDKK
Sbjct: 241 NYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKK 300

Query: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360
           LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT
Sbjct: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360

Query: 361 KGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           KGGQVVKY+ALLACGNYHGIVGYAKAKGPAVPIALQK
Sbjct: 361 KGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK 394

[Close]

BLAST of Moc02g11910 vs. ExPASy TrEMBL
Match: A0A6J1G7C4 (uncharacterized protein LOC111451428 OS=Cucurbita moschata OX=3662 GN=LOC111451428 PE=3 SV=1)

HSP 1 Score: 676.4 bits (1744), Expect = 7.3e-191
Identity = 358/397 (90.18%), Postives = 379/397 (95.47%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILSQVVQ-NPTKTPLHITRNISNLRRFPFEEIPKFSFSGAAR-YSTA 60
           MVNKSQAFSWSRLIL+QVVQ NP +TP+HI+R IS+  RFPFEEIPK   + AAR YSTA
Sbjct: 1   MVNKSQAFSWSRLILNQVVQRNPIQTPIHISRKISSFARFPFEEIPK---TLAARCYSTA 60

Query: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTG 120
           SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED+EDYMGVGPLIEKLEKEKLKDTG
Sbjct: 61  SARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTG 120

Query: 121 DLNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMN 180
           +LNAYEEP+DSDSDE+DERFS ES+K+R D+FERKFKRHEELLK+FTE++N++DAFKWM+
Sbjct: 121 NLNAYEEPSDSDSDEEDERFSSESLKKRVDEFERKFKRHEELLKNFTETDNIEDAFKWMS 180

Query: 181 KIDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 240
           KIDKFEQKHF LRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPN PA
Sbjct: 181 KIDKFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNCPA 240

Query: 241 NYGVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKK 300
           NYGVIQ EQVG SVDL+EQSGF KEKQIIQG DDDDEEEFDDMKERDDILLEKLNAIDKK
Sbjct: 241 NYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKK 300

Query: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360
           LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT
Sbjct: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 360

Query: 361 KGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           KGGQV+KYTALLACGNYHGIVGYAKAKGPAVPIALQK
Sbjct: 361 KGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQK 394

[Close]

BLAST of Moc02g11910 vs. ExPASy TrEMBL
Match: A0A6J1KZ96 (uncharacterized protein LOC111499608 OS=Cucurbita maxima OX=3661 GN=LOC111499608 PE=3 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 4.8e-190
Identity = 354/396 (89.39%), Postives = 376/396 (94.95%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLILSQVV-QNPTKTPLHITRNISNLRRFPFEEIPKFSFSGAARYSTAS 60
           MVNKSQAF+WSRLIL+QVV QNP KTP+HI+R IS+  RFPFEEIPK   S A  YSTAS
Sbjct: 1   MVNKSQAFAWSRLILNQVVQQNPIKTPIHISRKISSFARFPFEEIPK--TSAARCYSTAS 60

Query: 61  ARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLKDTGD 120
           ARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDED EDYMGVGPLIEKLEKEKLKDTG+
Sbjct: 61  ARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDGEDYMGVGPLIEKLEKEKLKDTGN 120

Query: 121 LNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMNK 180
           LNAYEEP+DSDSDE+DERFS ES+K+RFD+F+RKFKRHEELLK+FTE++N++DAFKWM+K
Sbjct: 121 LNAYEEPSDSDSDEEDERFSSESLKKRFDEFKRKFKRHEELLKNFTETDNIEDAFKWMSK 180

Query: 181 IDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPAN 240
           IDKFEQKHF LRPEYRVIGELMNRLKVAEGKEKFILQQKLNRA RLVEWK+AYDPN PAN
Sbjct: 181 IDKFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRATRLVEWKDAYDPNCPAN 240

Query: 241 YGVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKKL 300
           YGVIQ EQVG SVDL+EQSGF +EKQIIQG DDDDEEEFDDMKERDDILLEKLNAIDKKL
Sbjct: 241 YGVIQHEQVGPSVDLMEQSGFEEEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKL 300

Query: 301 EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTK 360
           EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTK
Sbjct: 301 EEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTK 360

Query: 361 GGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           GGQV+KYTALLACGNYHGIVGYAKAKGPAVPIALQK
Sbjct: 361 GGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQK 394

[Close]

BLAST of Moc02g11910 vs. ExPASy TrEMBL
Match: A0A6P5SRA9 (uncharacterized protein LOC110758591 OS=Prunus avium OX=42229 GN=LOC110758591 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 4.2e-178
Identity = 327/397 (82.37%), Postives = 361/397 (90.93%), Query Frame = 0


Query: 2   VNKSQAFSWSRLILSQVVQNPTKTPLHITRNISNLRRFPFEEIPK--FSFSGAARYSTAS 61
           +NKSQAFSWSRLIL+Q ++NPTK PL  +R IS    FP    PK  FSFSG   YST S
Sbjct: 1   MNKSQAFSWSRLILNQPIKNPTKAPLRFSRKISTSPHFPTSHAPKPSFSFSGKTHYSTVS 60

Query: 62  ARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYMGVGPLIEKLEKEKLK-DTG 121
           +R  QDLLAEVE+EKQREREQR+RAGLDTKDID ED+EDY+GV PLIEKL+KEKLK DTG
Sbjct: 61  SRAAQDLLAEVEREKQREREQRKRAGLDTKDIDQEDEEDYLGVIPLIEKLDKEKLKGDTG 120

Query: 122 DLNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEELLKHFTESENMDDAFKWMN 181
           DLN YEEPTDSDSDEDDERF+P++VK+RFD+F++KF RHEELLK+FTE+  +DDAFKWMN
Sbjct: 121 DLNLYEEPTDSDSDEDDERFTPDAVKKRFDEFQKKFTRHEELLKNFTEAGTLDDAFKWMN 180

Query: 182 KIDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLVEWKEAYDPNNPA 241
           KIDKFEQKHF LRPEYRVIGEL+NRLKVAEGK+KFILQQKLNRAMRLV+WKEAYDPNNPA
Sbjct: 181 KIDKFEQKHFRLRPEYRVIGELINRLKVAEGKDKFILQQKLNRAMRLVQWKEAYDPNNPA 240

Query: 242 NYGVIQQEQVGSSVDLLEQSGFAKEKQIIQGADDDDEEEFDDMKERDDILLEKLNAIDKK 301
           NYG+IQ EQV SSVDLLE +GF KEKQIIQG DDDD+EEF+DMKE+DDILLEKLN IDKK
Sbjct: 241 NYGLIQHEQVESSVDLLEHAGFEKEKQIIQGVDDDDDEEFNDMKEKDDILLEKLNTIDKK 300

Query: 302 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVT 361
           LEEKLAELDHTFGKKGKVLEEEIRDLAEERN LTEKKRRPLYRKGFDVK+I+VNRTCKVT
Sbjct: 301 LEEKLAELDHTFGKKGKVLEEEIRDLAEERNDLTEKKRRPLYRKGFDVKIINVNRTCKVT 360

Query: 362 KGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQK 396
           KGGQVVKY+A+LACGNYHG+VGYAKAKGPAVPIALQK
Sbjct: 361 KGGQVVKYSAILACGNYHGVVGYAKAKGPAVPIALQK 397

[Close]

BLAST of Moc02g11910 vs. TAIR 10
Match: AT1G64880.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 442.6 bits (1137), Expect = 3.4e-124
Identity = 252/421 (59.86%), Postives = 311/421 (73.87%), Query Frame = 0


Query: 4   KSQAFSWSRLILSQVVQNPTKTPLHITRNISNL--------RR---------FPFEEIPK 63
           +++A SW RL+L    +NP  +    +R IS L        RR         FP  + P 
Sbjct: 4   RTRASSWPRLLLR---RNPRSS---FSRQISTLDSSTSTFPRRISGYYSSSFFPVNQTPW 63

Query: 64  FS------FSGAARYSTASARVVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDQEDYM 123
            S      FS +    + + RVV++L+AEVEKEKQRERE+R+R GLD KDID ED+EDY+
Sbjct: 64  ISSQRYRFFSSSTMSPSEADRVVRELIAEVEKEKQREREERQRQGLDYKDIDAEDEEDYL 123

Query: 124 GVGPLIEKLEKEKLKDTGDLNAYEEPTDSDSDEDDERFSPESVKERFDKFERKFKRHEEL 183
           G+ P IEKL+K+ LKD G+LN  EE +DSDS+ D+     E  KE  D F +KF+RH+EL
Sbjct: 124 GIEPFIEKLKKQNLKDDGELNRREESSDSDSEYDEIDLDEERKKE--DIFNKKFQRHKEL 183

Query: 184 LKHFTESENMDDAFKWMNKIDKFEQKHFGLRPEYRVIGELMNRLKVAEGKEKFILQQKLN 243
           L+  T+SE +D+AF+WMNK+DKFE+KHF LRPEYRVIGELMNRLKVAEGKEKF+LQQKLN
Sbjct: 184 LQTLTKSETLDEAFRWMNKLDKFEEKHFKLRPEYRVIGELMNRLKVAEGKEKFVLQQKLN 243

Query: 244 RAMRLVEWKEAYDPNNPANYGVIQQEQVGSSVDLLEQSGFAKEKQII------QGADDDD 303
           RAMRLVEWKEA+DPNNPANYGVI+++ V       +  G  +E++++         DDDD
Sbjct: 244 RAMRLVEWKEAFDPNNPANYGVIERDNV-------QGGGEEREERLVADGPKDDNDDDDD 303

Query: 304 EEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEK 363
           EEEFDDMKERDDILLEKLNAIDKKLE KL+ELDHTFGKKGK LEEEIR+LAE+RN+LTEK
Sbjct: 304 EEEFDDMKERDDILLEKLNAIDKKLEIKLSELDHTFGKKGKRLEEEIRELAEDRNALTEK 363

Query: 364 KRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQ 396
           KR+PLYRKG+DV +IDV + CKVTKGG+V +YTAL+ CGNY GI+GYAKAK      A+Q
Sbjct: 364 KRQPLYRKGYDVHVIDVKKVCKVTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAMQ 409

[Close]

BLAST of Moc02g11910 vs. TAIR 10
Match: AT2G33800.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 46.6 bits (109), Expect = 5.5e-05
Identity = 23/62 (37.10%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 334 KKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIAL 393
           K ++   R GF+ +++ V R  KV KGG+ +K+ A++  G+  G VG   AK   V  A+
Sbjct: 137 KPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAV 196

Query: 394 QK 396
           QK
Sbjct: 197 QK 198

The following BLAST results are available for this feature:

BLAST of Moc02g11910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148602.1	1.8e-215	100.00	uncharacterized protein LOC111017222 [Momordica charantia]	[more]
KAG6571211.1	8.6e-194	91.44	hypothetical protein SDJN03_30126, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023512942.1	8.6e-194	91.69	uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo] >XP_023512943....	[more]
XP_022943762.1	5.6e-193	91.18	DEAD-box ATP-dependent RNA helicase 42 [Cucurbita moschata] >XP_022943763.1 DEAD...	[more]
XP_023533655.1	1.6e-192	90.40	uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo] >XP_023533656....	[more]

BLAST of Moc02g11910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1R0F8	1.4e-05	45.31	30S ribosomal protein S5 OS=Chromohalobacter salexigens (strain ATCC BAA-138 / D...	[more]
Q2S929	1.8e-05	46.94	30S ribosomal protein S5 OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=r...	[more]
Q0VSI6	2.4e-05	44.44	30S ribosomal protein S5 OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11...	[more]
Q5X842	2.4e-05	41.67	30S ribosomal protein S5 OS=Legionella pneumophila (strain Paris) OX=297246 GN=r...	[more]
A5IHP7	2.4e-05	41.67	30S ribosomal protein S5 OS=Legionella pneumophila (strain Corby) OX=400673 GN=r...	[more]

BLAST of Moc02g11910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5I3	8.6e-216	100.00	uncharacterized protein LOC111017222 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1FXC7	2.7e-193	91.18	DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1G7C4	7.3e-191	90.18	uncharacterized protein LOC111451428 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1KZ96	4.8e-190	89.39	uncharacterized protein LOC111499608 OS=Cucurbita maxima OX=3661 GN=LOC111499608...	[more]
A0A6P5SRA9	4.2e-178	82.37	uncharacterized protein LOC110758591 OS=Prunus avium OX=42229 GN=LOC110758591 PE...	[more]

BLAST of Moc02g11910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64880.1	3.4e-124	59.86	Ribosomal protein S5 family protein	[more]
AT2G33800.1	5.5e-05	37.10	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 60..87
None	No IPR available	COILS	Coil	Coil	coord: 314..337
None	No IPR available	COILS	Coil	Coil	coord: 289..309
None	No IPR available	GENE3D	3.30.160.20		coord: 293..402 e-value: 1.2E-17 score: 66.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..142
None	No IPR available	PANTHER	PTHR13718:SF61	28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL	coord: 38..395
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 339..395
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 344..395 e-value: 1.8E-13 score: 50.2
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 344..402 score: 13.849996
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 38..395

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g11910.1	Moc02g11910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome