Moc02g10750 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g10750
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	organ-specific protein P4
Location	chr2: 7637846 .. 7638463 (-)
RNA-Seq Expression	Moc02g10750
Synteny	Moc02g10750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCTTTCAGTTGCTTTCTTCCTCCTCCTTTCTCTTCTCCTGGTTAGCTTCCCATCTTCCTTATTTAATTTGTTCTTAAAAACTTTTTAATTTCTTGATTTTTTCGTTTTAGATCAAAAGTTCAGTACATAGAAACATGTTTGATCTTGAGAAGCTATTCATTTATTATTTCTGTTTGAATTTGTGAAGTTGTTTATGTATTTTTGCATACAACTTTACCTGATATAAGTCTTAGAATCCAAAGAAATTATTGACAAAACTGAAATGATTATCAAATGGGACCGCTGTTTTCAACAAATAAAGAAATTACGGACAAAATTGAAATGGTTATCAAACGGGGTCGTGTTTTTTATGCAGTTTGCAGAGGGAGGGTATGGAAGGAAGGATCAAGGGGAGTATTGGAAGAAAATAATGAAAGAGGAAGAAATTCCAGAGGTTCTAAAGGAGCTGTTATATGATGATTCAGTGGGCGGCCAAAACGAGCGTTTTATGAGCAATTTTGACCCTCATCCCAACGCTATAATATACCACTCCCACTCCCATGGCGCCGCCGCCGGCCATGAGCATTCTGATGAGAAGATCAAAGCCGCCGCCGGCGACTCTGCAGCGCCGTGA

mRNA sequence

ATGAAGCTTTCAGTTGCTTTCTTCCTCCTCCTTTCTCTTCTCCTGTTTGCAGAGGGAGGGTATGGAAGGAAGGATCAAGGGGAGTATTGGAAGAAAATAATGAAAGAGGAAGAAATTCCAGAGGTTCTAAAGGAGCTGTTATATGATGATTCAGTGGGCGGCCAAAACGAGCGTTTTATGAGCAATTTTGACCCTCATCCCAACGCTATAATATACCACTCCCACTCCCATGGCGCCGCCGCCGGCCATGAGCATTCTGATGAGAAGATCAAAGCCGCCGCCGGCGACTCTGCAGCGCCGTGA

Coding sequence (CDS)

ATGAAGCTTTCAGTTGCTTTCTTCCTCCTCCTTTCTCTTCTCCTGTTTGCAGAGGGAGGGTATGGAAGGAAGGATCAAGGGGAGTATTGGAAGAAAATAATGAAAGAGGAAGAAATTCCAGAGGTTCTAAAGGAGCTGTTATATGATGATTCAGTGGGCGGCCAAAACGAGCGTTTTATGAGCAATTTTGACCCTCATCCCAACGCTATAATATACCACTCCCACTCCCATGGCGCCGCCGCCGGCCATGAGCATTCTGATGAGAAGATCAAAGCCGCCGCCGGCGACTCTGCAGCGCCGTGA

Protein sequence

MKLSVAFFLLLSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFMSNFDPHPNAIIYHSHSHGAAAGHEHSDEKIKAAAGDSAAP

Homology

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BLAST of Moc02g10750 vs. NCBI nr
Match: XP_022148637.1 (organ-specific protein P4 [Momordica charantia])

HSP 1 Score: 200.3 bits (508), Expect = 7.9e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MKLSVAFFLLLSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFM 60
           MKLSVAFFLLLSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFM
Sbjct: 1   MKLSVAFFLLLSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFM 60

Query: 61  SNFDPHPNAIIYHSHSHGAAAGHEHSDEKIKAAAGDSAAP 101
           SNFDPHPNAIIYHSHSHGAAAGHEHSDEKIKAAAGDSAAP
Sbjct: 61  SNFDPHPNAIIYHSHSHGAAAGHEHSDEKIKAAAGDSAAP 100

[Close]

BLAST of Moc02g10750 vs. NCBI nr
Match: XP_022986644.1 (organ-specific protein S2-like [Cucurbita maxima])

HSP 1 Score: 122.5 bits (306), Expect = 2.1e-24
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 0


Query: 1  MKLSVAFFLLLSLLLFAEGGYG-RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNER 60
          MKLS+AFFLLLSL+LF +  +G RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +R
Sbjct: 1  MKLSLAFFLLLSLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQR 60

Query: 61 FMSNFDPHPNAIIYHSHSHGAAAGH 84
          FM+NFDPHPNAIIYH+H+H  A GH
Sbjct: 61 FMNNFDPHPNAIIYHAHAHAHAHGH 85

[Close]

BLAST of Moc02g10750 vs. NCBI nr
Match: KAG6571127.1 (hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010938.1 hypothetical protein SDJN02_27736, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117.5 bits (293), Expect = 6.7e-23
Identity = 65/104 (62.50%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 1   MKLSVAFFLLLSLLLFAEGGYG-RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNER 60
           MKLS+AFFLLLSL+LF +  +G RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +R
Sbjct: 1   MKLSLAFFLLLSLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQR 60

Query: 61  FMSNFDPHPNAIIYHSHS----HGAAAGHEHSDEKIKAAAGDSA 99
           FM+NFDPHPNAIIYH+H+    HGAA    + D K      +SA
Sbjct: 61  FMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSA 104

[Close]

BLAST of Moc02g10750 vs. NCBI nr
Match: XP_023513271.1 (organ-specific protein S2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117.1 bits (292), Expect = 8.8e-23
Identity = 65/104 (62.50%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   MKLSVAFFLLLSLLLFAEGGYG-RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNER 60
           MKLS+AFFLLLSL+LF +   G RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +R
Sbjct: 1   MKLSLAFFLLLSLVLFVDVSDGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQR 60

Query: 61  FMSNFDPHPNAIIYHSHS----HGAAAGHEHSDEKIKAAAGDSA 99
           FM+NFDPHPNAIIYH+H+    HGAA    + D K      +SA
Sbjct: 61  FMNNFDPHPNAIIYHAHAHAHGHGAATPRRNIDIKFNPTGANSA 104

[Close]

BLAST of Moc02g10750 vs. NCBI nr
Match: XP_022944721.1 (organ-specific protein P4-like [Cucurbita moschata])

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 64/104 (61.54%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 1   MKLSVAFFLLLSLLLFAEGGYG-RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNER 60
           MKLS+AFFLL+SL+LF +  +G RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +R
Sbjct: 1   MKLSLAFFLLISLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQR 60

Query: 61  FMSNFDPHPNAIIYHSHS----HGAAAGHEHSDEKIKAAAGDSA 99
           FM+NFDPHPNAIIYH+H+    HGAA    + D K      +SA
Sbjct: 61  FMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSA 104

[Close]

BLAST of Moc02g10750 vs. ExPASy Swiss-Prot
Match: P17771 (Organ-specific protein P4 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 3.3e-04
Identity = 37/109 (33.94%), Postives = 55/109 (50.46%), Query Frame = 0


Query: 1   MKLSVAFFLL-LSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSV------G 60
           M L  AF LL L L L       RKD GEYWK +MK++++PE ++ LL   ++       
Sbjct: 2   MSLRSAFALLPLFLFLIVANVESRKDVGEYWKLVMKDQDMPEEIQGLLDASNIKNSKTHA 61

Query: 61  GQNERFMSNFDPHPNAIIY-----HSHSHGAAAGHEHSDEKIKAAAGDS 98
            +N+  +  F+P PNA  Y     H++ +  A G E       +A GD+
Sbjct: 62  KENKGAIGEFEPCPNASAYGDNEIHANENKGAIG-EFETRPNGSAYGDN 109

[Close]

BLAST of Moc02g10750 vs. ExPASy TrEMBL
Match: A0A6J1D5L4 (organ-specific protein P4 OS=Momordica charantia OX=3673 GN=LOC111017249 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.8e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MKLSVAFFLLLSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFM 60
           MKLSVAFFLLLSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFM
Sbjct: 1   MKLSVAFFLLLSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFM 60

Query: 61  SNFDPHPNAIIYHSHSHGAAAGHEHSDEKIKAAAGDSAAP 101
           SNFDPHPNAIIYHSHSHGAAAGHEHSDEKIKAAAGDSAAP
Sbjct: 61  SNFDPHPNAIIYHSHSHGAAAGHEHSDEKIKAAAGDSAAP 100

[Close]

BLAST of Moc02g10750 vs. ExPASy TrEMBL
Match: A0A6J1JGL9 (organ-specific protein S2-like OS=Cucurbita maxima OX=3661 GN=LOC111484322 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.0e-24
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 0


Query: 1  MKLSVAFFLLLSLLLFAEGGYG-RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNER 60
          MKLS+AFFLLLSL+LF +  +G RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +R
Sbjct: 1  MKLSLAFFLLLSLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQR 60

Query: 61 FMSNFDPHPNAIIYHSHSHGAAAGH 84
          FM+NFDPHPNAIIYH+H+H  A GH
Sbjct: 61 FMNNFDPHPNAIIYHAHAHAHAHGH 85

[Close]

BLAST of Moc02g10750 vs. ExPASy TrEMBL
Match: A0A6J1FYV4 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111449094 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.6e-23
Identity = 64/104 (61.54%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 1   MKLSVAFFLLLSLLLFAEGGYG-RKDQGEYWKKIMKEEEIPEVLKELLYDDS-VGGQNER 60
           MKLS+AFFLL+SL+LF +  +G RKDQG+YWKK+MK EEIPE+LKELL+DDS V  Q +R
Sbjct: 1   MKLSLAFFLLISLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVENQKQR 60

Query: 61  FMSNFDPHPNAIIYHSHS----HGAAAGHEHSDEKIKAAAGDSA 99
           FM+NFDPHPNAIIYH+H+    HGAA    + D K      +SA
Sbjct: 61  FMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSA 104

[Close]

BLAST of Moc02g10750 vs. ExPASy TrEMBL
Match: A0A6J1L3N5 (organ-specific protein P4-like OS=Cucurbita maxima OX=3661 GN=LOC111499606 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-20
Identity = 60/98 (61.22%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 1  MKLSVAFFLLLSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDD----SVGGQN 60
          MKLS AFF LLSLLL A   + RK++GEYWKK+MK+E IPE+LKELL+DD    S   Q+
Sbjct: 1  MKLSAAFF-LLSLLLLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQS 60

Query: 61 ERFMSNFDPHPNAIIYHSHSHGAAAGHEHSDEKIKAAA 95
          ERFM+NFD HPNAIIYHSH     A H+H   K K  A
Sbjct: 61 ERFMNNFDTHPNAIIYHSH----GATHDHPGHKTKLTA 93

[Close]

BLAST of Moc02g10750 vs. ExPASy TrEMBL
Match: A0A6J1G7K5 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111451468 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.9e-19
Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 1  MKLSVAFFLLLSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDD----SVGGQN 60
          MKLS AFFLL  L+L A   + RK++GEYWKK+MK+E IPE+LKELL+DD    S   Q+
Sbjct: 1  MKLSAAFFLLF-LILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQS 60

Query: 61 ERFMSNFDPHPNAIIYHSHSHGAAAGHEHSDEKIKAAA 95
          E FM+NFD HPNAIIYHSH     A H+H   K K +A
Sbjct: 61 EHFMNNFDTHPNAIIYHSH----GATHDHPGHKTKPSA 93

[Close]

BLAST of Moc02g10750 vs. TAIR 10
Match: AT1G49310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; Has 11 Blast hits to 11 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 5.9e-09
Identity = 35/72 (48.61%), Postives = 42/72 (58.33%), Query Frame = 0


Query: 5  VAFFLLLSLLLFAEGGYGRKD--QGEYWKKIMKEEEIPEVLKELLYDDSVGGQNERFMSN 64
          V F +LLS LLF     GR      EYWKK+MK E +PE +KELL +     Q ERF+ N
Sbjct: 9  VVFIVLLSFLLFVNLSEGRTGGVAEEYWKKMMKNEPLPEPIKELLNNPFRTAQ-ERFIQN 68

Query: 65 FDPHPNAIIYHS 75
          FD     IIYH+
Sbjct: 69 FDTKSVVIIYHN 79

The following BLAST results are available for this feature:

BLAST of Moc02g10750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148637.1	7.9e-48	100.00	organ-specific protein P4 [Momordica charantia]	[more]
XP_022986644.1	2.1e-24	71.76	organ-specific protein S2-like [Cucurbita maxima]	[more]
KAG6571127.1	6.7e-23	62.50	hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023513271.1	8.8e-23	62.50	organ-specific protein S2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944721.1	1.2e-22	61.54	organ-specific protein P4-like [Cucurbita moschata]	[more]

BLAST of Moc02g10750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P17771	3.3e-04	33.94	Organ-specific protein P4 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]

BLAST of Moc02g10750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5L4	3.8e-48	100.00	organ-specific protein P4 OS=Momordica charantia OX=3673 GN=LOC111017249 PE=4 SV...	[more]
A0A6J1JGL9	1.0e-24	71.76	organ-specific protein S2-like OS=Cucurbita maxima OX=3661 GN=LOC111484322 PE=4 ...	[more]
A0A6J1FYV4	5.6e-23	61.54	organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111449094 PE=...	[more]
A0A6J1L3N5	1.5e-20	61.22	organ-specific protein P4-like OS=Cucurbita maxima OX=3661 GN=LOC111499606 PE=4 ...	[more]
A0A6J1G7K5	2.9e-19	58.16	organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111451468 PE=...	[more]

BLAST of Moc02g10750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49310.1	5.9e-09	48.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024489	Organ specific protein	PFAM	PF10950	Organ_specific	coord: 24..49 e-value: 4.7E-6 score: 27.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..92
None	No IPR available	PANTHER	PTHR33731	PROTEIN, PUTATIVE-RELATED	coord: 1..79
None	No IPR available	PANTHER	PTHR33731:SF2	PROTEIN, PUTATIVE-RELATED	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g10750.1	Moc02g10750.1	mRNA