Moc02g09350 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g09350
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DUF1279 domain-containing protein
Location	chr2: 6636820 .. 6637278 (-)
RNA-Seq Expression	Moc02g09350
Synteny	Moc02g09350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCTTCACCGGCGGCGGCCGATTCCGCGAGCTTCTCAGAAAGTACGGCAAGGTCGCAATCGGAGTTCATTTCTCAGTCTCTGCAGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTCGAATCGCTACTCGACAAGTTGCACATGGATGGATTCTCTTCCAAAGATCAACCGCAGACGATTCCCTCCGAATCCACGTCGTCCGCAGATGACGGATTTGTGATCGAAGAAAGGCCTGTGTCGGAAAATCAATCGACGGCGGTGCAGGAGCCGAGGAGGAGGAATCGCACCGCCGAGCTCGCAGCGTCGACTGGCGGCGCGTTGGCTTTGGCCGTGCTTTGCAACAAGGCGCTGCTGCCGATTCGGATTCCGATAACGATTGCGCTCACGCCGCCGATCTCGAGGCTGCTGGCGAGGCGAGGGATTATGAGAAGTGGTTAA

mRNA sequence

ATGGCTTTCTTCACCGGCGGCGGCCGATTCCGCGAGCTTCTCAGAAAGTACGGCAAGGTCGCAATCGGAGTTCATTTCTCAGTCTCTGCAGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTCGAATCGCTACTCGACAAGTTGCACATGGATGGATTCTCTTCCAAAGATCAACCGCAGACGATTCCCTCCGAATCCACGTCGTCCGCAGATGACGGATTTGTGATCGAAGAAAGGCCTGTGTCGGAAAATCAATCGACGGCGGTGCAGGAGCCGAGGAGGAGGAATCGCACCGCCGAGCTCGCAGCGTCGACTGGCGGCGCGTTGGCTTTGGCCGTGCTTTGCAACAAGGCGCTGCTGCCGATTCGGATTCCGATAACGATTGCGCTCACGCCGCCGATCTCGAGGCTGCTGGCGAGGCGAGGGATTATGAGAAGTGGTTAA

Coding sequence (CDS)

ATGGCTTTCTTCACCGGCGGCGGCCGATTCCGCGAGCTTCTCAGAAAGTACGGCAAGGTCGCAATCGGAGTTCATTTCTCAGTCTCTGCAGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTCGAATCGCTACTCGACAAGTTGCACATGGATGGATTCTCTTCCAAAGATCAACCGCAGACGATTCCCTCCGAATCCACGTCGTCCGCAGATGACGGATTTGTGATCGAAGAAAGGCCTGTGTCGGAAAATCAATCGACGGCGGTGCAGGAGCCGAGGAGGAGGAATCGCACCGCCGAGCTCGCAGCGTCGACTGGCGGCGCGTTGGCTTTGGCCGTGCTTTGCAACAAGGCGCTGCTGCCGATTCGGATTCCGATAACGATTGCGCTCACGCCGCCGATCTCGAGGCTGCTGGCGAGGCGAGGGATTATGAGAAGTGGTTAA

Protein sequence

MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPISRLLARRGIMRSG

Homology

[Close]

BLAST of Moc02g09350 vs. NCBI nr
Match: XP_022146083.1 (uncharacterized protein LOC111015379 [Momordica charantia])

HSP 1 Score: 285.0 bits (728), Expect = 3.7e-73
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60
           MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120
           KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC
Sbjct: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 153
           NKALLPIRIPITIALTPPISRLLARRGIMRSG
Sbjct: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 152

[Close]

BLAST of Moc02g09350 vs. NCBI nr
Match: XP_023533856.1 (uncharacterized protein LOC111795580 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.8 bits (673), Expect = 8.9e-67
Identity = 139/152 (91.45%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60
           MAFFTGGGRFRELLRKYGKVAIGVHFSVS+ASITGLYVAIKNNVDVESLLDKLHMDGFSS
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSSASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120
           KD PQT PSE TSS DDGFVIEERP SE QST ++EPR+RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITSSVDDGFVIEERPTSEIQSTVMEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 153
           NKALLPIR+PITIALTPPI+RLLARRGIMRSG
Sbjct: 121 NKALLPIRVPITIALTPPIARLLARRGIMRSG 152

[Close]

BLAST of Moc02g09350 vs. NCBI nr
Match: XP_022947464.1 (uncharacterized protein LOC111451320 [Cucurbita moschata] >KAG7027024.1 hypothetical protein SDJN02_11032, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 262.3 bits (669), Expect = 2.6e-66
Identity = 139/152 (91.45%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60
           MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120
           KD PQT PSE TSS DDGFVIEERP S  QST ++EPR+RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITSSVDDGFVIEERPTSGIQSTVMEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 153
           NKALLPIR+PITIALTPPI+RLLARRGIMRSG
Sbjct: 121 NKALLPIRVPITIALTPPIARLLARRGIMRSG 152

[Close]

BLAST of Moc02g09350 vs. NCBI nr
Match: XP_022971121.1 (uncharacterized protein LOC111469888 [Cucurbita maxima])

HSP 1 Score: 261.9 bits (668), Expect = 3.4e-66
Identity = 140/152 (92.11%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60
           MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120
           KD PQT PSE T S DDGFVIEERP S  QST V+EPR+RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITPSVDDGFVIEERPTSGIQSTVVEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 153
           NKALLPIRIPITIALTPPI+RLLARRGIMRSG
Sbjct: 121 NKALLPIRIPITIALTPPIARLLARRGIMRSG 152

[Close]

BLAST of Moc02g09350 vs. NCBI nr
Match: KAG6604946.1 (hypothetical protein SDJN03_02263, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261.2 bits (666), Expect = 5.7e-66
Identity = 139/152 (91.45%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60
           MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNN+DVESLLDKLHMDGFSS
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNIDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120
           KD PQT PSE TSS DDGFVIEERP S  QST V+EPR RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITSSVDDGFVIEERPTSGIQSTVVEEPRIRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 153
           NKALLPIR+PITIALTPPI+RLLARRGIMRSG
Sbjct: 121 NKALLPIRVPITIALTPPIARLLARRGIMRSG 152

[Close]

BLAST of Moc02g09350 vs. ExPASy TrEMBL
Match: A0A6J1CXM4 (uncharacterized protein LOC111015379 OS=Momordica charantia OX=3673 GN=LOC111015379 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.8e-73
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60
           MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120
           KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC
Sbjct: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 153
           NKALLPIRIPITIALTPPISRLLARRGIMRSG
Sbjct: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 152

[Close]

BLAST of Moc02g09350 vs. ExPASy TrEMBL
Match: A0A6J1G6W3 (uncharacterized protein LOC111451320 OS=Cucurbita moschata OX=3662 GN=LOC111451320 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66
Identity = 139/152 (91.45%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60
           MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120
           KD PQT PSE TSS DDGFVIEERP S  QST ++EPR+RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITSSVDDGFVIEERPTSGIQSTVMEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 153
           NKALLPIR+PITIALTPPI+RLLARRGIMRSG
Sbjct: 121 NKALLPIRVPITIALTPPIARLLARRGIMRSG 152

[Close]

BLAST of Moc02g09350 vs. ExPASy TrEMBL
Match: A0A6J1I2F7 (uncharacterized protein LOC111469888 OS=Cucurbita maxima OX=3661 GN=LOC111469888 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66
Identity = 140/152 (92.11%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60
           MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120
           KD PQT PSE T S DDGFVIEERP S  QST V+EPR+RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITPSVDDGFVIEERPTSGIQSTVVEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 153
           NKALLPIRIPITIALTPPI+RLLARRGIMRSG
Sbjct: 121 NKALLPIRIPITIALTPPIARLLARRGIMRSG 152

[Close]

BLAST of Moc02g09350 vs. ExPASy TrEMBL
Match: A0A6J1JD52 (uncharacterized protein LOC111483951 OS=Cucurbita maxima OX=3661 GN=LOC111483951 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 135/152 (88.82%), Postives = 139/152 (91.45%), Query Frame = 0


Query: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60
           MAFFTGGGRFRELL+KYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS
Sbjct: 1   MAFFTGGGRFRELLKKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120
           KDQ QT P E+ SS DDG VIEE P SE QST  QEPR RNRTAELAASTGGALALAVLC
Sbjct: 61  KDQSQTSPGETASSVDDGLVIEESPASETQSTVAQEPRTRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 153
           NKALLPIRIPITI LTPPI+R+LARRGIMRSG
Sbjct: 121 NKALLPIRIPITIGLTPPIARMLARRGIMRSG 152

[Close]

BLAST of Moc02g09350 vs. ExPASy TrEMBL
Match: A0A6J1FU56 (uncharacterized protein LOC111448454 OS=Cucurbita moschata OX=3662 GN=LOC111448454 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.3e-60
Identity = 131/152 (86.18%), Postives = 135/152 (88.82%), Query Frame = 0


Query: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60
           MAFFTGGGRFRELL+KYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS
Sbjct: 1   MAFFTGGGRFRELLKKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTIPSESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLC 120
           KDQ QT P       DDG VIEE P S+ QST  QEPR RNRTAELAASTGGALALAVLC
Sbjct: 61  KDQSQTSP-------DDGLVIEESPASDIQSTVAQEPRTRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPISRLLARRGIMRSG 153
           NKALLPIRIPITI LTPPI+R+LARRGIMRSG
Sbjct: 121 NKALLPIRIPITIGLTPPIARMLARRGIMRSG 145

[Close]

BLAST of Moc02g09350 vs. TAIR 10
Match: AT2G20940.1 (Protein of unknown function (DUF1279) )

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-32
Identity = 77/144 (53.47%), Postives = 98/144 (68.06%), Query Frame = 0


Query: 9   RFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSSKDQPQTIP 68
           R +E+++KYGKVA+GVHFSVS  SI+G Y+AIKNNVDVESLL+K  +  FSSK+ P   P
Sbjct: 4   RLKEIVKKYGKVALGVHFSVSGVSISGFYIAIKNNVDVESLLEKYQIPWFSSKENPN--P 63

Query: 69  SESTSSADDGFVIEERPVSENQSTAVQEPRRRNRTAELAASTGGALALAVLCNKALLPIR 128
           S      + G V  +                 N+T +LA S GGALALAVLCNKAL PIR
Sbjct: 64  SLDLKLEEQGSVTSD-----------------NKTKQLAKSAGGALALAVLCNKALFPIR 123

Query: 129 IPITIALTPPISRLLARRGIMRSG 153
           +PIT+ALTPPI+R L +R I+++G
Sbjct: 124 VPITMALTPPIARFLRQRKILKTG 128

The following BLAST results are available for this feature:

BLAST of Moc02g09350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146083.1	3.7e-73	100.00	uncharacterized protein LOC111015379 [Momordica charantia]	[more]
XP_023533856.1	8.9e-67	91.45	uncharacterized protein LOC111795580 [Cucurbita pepo subsp. pepo]	[more]
XP_022947464.1	2.6e-66	91.45	uncharacterized protein LOC111451320 [Cucurbita moschata] >KAG7027024.1 hypothet...	[more]
XP_022971121.1	3.4e-66	92.11	uncharacterized protein LOC111469888 [Cucurbita maxima]	[more]
KAG6604946.1	5.7e-66	91.45	hypothetical protein SDJN03_02263, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc02g09350 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc02g09350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXM4	1.8e-73	100.00	uncharacterized protein LOC111015379 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1G6W3	1.2e-66	91.45	uncharacterized protein LOC111451320 OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1I2F7	1.6e-66	92.11	uncharacterized protein LOC111469888 OS=Cucurbita maxima OX=3661 GN=LOC111469888...	[more]
A0A6J1JD52	2.0e-64	88.82	uncharacterized protein LOC111483951 OS=Cucurbita maxima OX=3661 GN=LOC111483951...	[more]
A0A6J1FU56	2.3e-60	86.18	uncharacterized protein LOC111448454 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]

BLAST of Moc02g09350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20940.1	1.5e-32	53.47	Protein of unknown function (DUF1279)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009688	Protein FAM210A/B-like domain	PFAM	PF06916	DUF1279	coord: 9..137 e-value: 4.0E-26 score: 91.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..100
None	No IPR available	PANTHER	PTHR21377	UNCHARACTERIZED	coord: 8..150
None	No IPR available	PANTHER	PTHR21377:SF0	PROTEIN FAM210B, MITOCHONDRIAL	coord: 8..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g09350.1	Moc02g09350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion