Moc02g06680 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g06680
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ethylene-responsive transcription factor 3
Location	chr2: 4753733 .. 4754389 (+)
RNA-Seq Expression	Moc02g06680
Synteny	Moc02g06680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGCGAGGCAGACCCTCAGATCCATTTACAGCGAGAGAAGTGCCAAAATCGACCGTGCAGCCCGAGAATCCTCTCAAAGAGATCCGATACAGAGGCGTTCGGAAGCGTCCTTGGGGGAGATACGCCGCTGAGATCAGAGATCCCTGGAAGAAGACTAGGGTTTGGCTCGGCACCTTCGATTCCGCCGAGGAAGCCGCTCGGGCGTACGATACTGCCGCTCGCTCTCTCCGTGGAGCCAAGGCCAAAACTAACTTCCCCTTACATCCATCCGCGATTTCGATTCAGCAACAGATTCCGTTTTACCAATCGACGCCGGATTTGCACGATTCGAACGCTTTTGGCAAGATTGACTGTGTGCAGGCCAATCGGCCTACGTCCAGCAGCTTGAGTTCCACCGTGGAGTCGTTTAGCGGGCCGCGGATTTCTAATCCCCTGTCGTCGCTGTCGATGGTTCGACGGAGGCCGGTGCAGCCAGTTTCGCCGGACGACTGCCATAGCGACTGCGATTCGTCGTCCTCGGTTGTCGATGATGATGAGGTCTGTGTGCTTGCTTCTTTCCGTAGAGCCTTGCCGTTCGATCTTAACCTACCGCCTCCGATGGACGTCGTGGATTTAACCGGTGATGATCTTCAAGCCACTGCTTTATGCCTCTGA

mRNA sequence

ATGCGGCGAGGCAGACCCTCAGATCCATTTACAGCGAGAGAAGTGCCAAAATCGACCGTGCAGCCCGAGAATCCTCTCAAAGAGATCCGATACAGAGGCGTTCGGAAGCGTCCTTGGGGGAGATACGCCGCTGAGATCAGAGATCCCTGGAAGAAGACTAGGGTTTGGCTCGGCACCTTCGATTCCGCCGAGGAAGCCGCTCGGGCGTACGATACTGCCGCTCGCTCTCTCCGTGGAGCCAAGGCCAAAACTAACTTCCCCTTACATCCATCCGCGATTTCGATTCAGCAACAGATTCCGTTTTACCAATCGACGCCGGATTTGCACGATTCGAACGCTTTTGGCAAGATTGACTGTGTGCAGGCCAATCGGCCTACGTCCAGCAGCTTGAGTTCCACCGTGGAGTCGTTTAGCGGGCCGCGGATTTCTAATCCCCTGTCGTCGCTGTCGATGGTTCGACGGAGGCCGGTGCAGCCAGTTTCGCCGGACGACTGCCATAGCGACTGCGATTCGTCGTCCTCGGTTGTCGATGATGATGAGGTCTGTGTGCTTGCTTCTTTCCGTAGAGCCTTGCCGTTCGATCTTAACCTACCGCCTCCGATGGACGTCGTGGATTTAACCGGTGATGATCTTCAAGCCACTGCTTTATGCCTCTGA

Coding sequence (CDS)

ATGCGGCGAGGCAGACCCTCAGATCCATTTACAGCGAGAGAAGTGCCAAAATCGACCGTGCAGCCCGAGAATCCTCTCAAAGAGATCCGATACAGAGGCGTTCGGAAGCGTCCTTGGGGGAGATACGCCGCTGAGATCAGAGATCCCTGGAAGAAGACTAGGGTTTGGCTCGGCACCTTCGATTCCGCCGAGGAAGCCGCTCGGGCGTACGATACTGCCGCTCGCTCTCTCCGTGGAGCCAAGGCCAAAACTAACTTCCCCTTACATCCATCCGCGATTTCGATTCAGCAACAGATTCCGTTTTACCAATCGACGCCGGATTTGCACGATTCGAACGCTTTTGGCAAGATTGACTGTGTGCAGGCCAATCGGCCTACGTCCAGCAGCTTGAGTTCCACCGTGGAGTCGTTTAGCGGGCCGCGGATTTCTAATCCCCTGTCGTCGCTGTCGATGGTTCGACGGAGGCCGGTGCAGCCAGTTTCGCCGGACGACTGCCATAGCGACTGCGATTCGTCGTCCTCGGTTGTCGATGATGATGAGGTCTGTGTGCTTGCTTCTTTCCGTAGAGCCTTGCCGTTCGATCTTAACCTACCGCCTCCGATGGACGTCGTGGATTTAACCGGTGATGATCTTCAAGCCACTGCTTTATGCCTCTGA

Protein sequence

MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCVQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDEVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL

Homology

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BLAST of Moc02g06680 vs. NCBI nr
Match: XP_022149613.1 (ethylene-responsive transcription factor 3 [Momordica charantia])

HSP 1 Score: 439.5 bits (1129), Expect = 1.7e-119
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCV 120
           DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCV
Sbjct: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCV 120

Query: 121 QANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDE 180
           QANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDE
Sbjct: 121 QANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDE 180

Query: 181 VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
           VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL
Sbjct: 181 VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 218

[Close]

BLAST of Moc02g06680 vs. NCBI nr
Match: XP_038902603.1 (ethylene-responsive transcription factor 3-like [Benincasa hispida])

HSP 1 Score: 421.8 bits (1083), Expect = 3.6e-114
Identity = 209/219 (95.43%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGRPSDPFTA E+PKST+QPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTATEIPKSTIQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAF-GKIDC 120
           DSAEEAARAYD AAR+LRGAKAKTNFPLHPS ISIQQQIPFYQS PDLHDSN F GKI+C
Sbjct: 61  DSAEEAARAYDNAARTLRGAKAKTNFPLHPSTISIQQQIPFYQSPPDLHDSNGFGGKIEC 120

Query: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD 180
           VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD
Sbjct: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD 180

Query: 181 EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
           EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL
Sbjct: 181 EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219

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BLAST of Moc02g06680 vs. NCBI nr
Match: XP_004143195.1 (ethylene-responsive transcription factor 3 [Cucumis sativus] >XP_008456400.1 PREDICTED: ethylene-responsive transcription factor 3-like [Cucumis melo] >KAA0054487.1 ethylene-responsive transcription factor 3-like [Cucumis melo var. makuwa] >KGN47005.1 hypothetical protein Csa_020596 [Cucumis sativus] >TYK14552.1 ethylene-responsive transcription factor 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 419.9 bits (1078), Expect = 1.4e-113
Identity = 208/219 (94.98%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGRPSDPFTA E+P ST+QPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTATEIPNSTIQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFG-KIDC 120
           DSAEEAARAYD AAR+LRGAKAKTNFPLHPS ISIQQQIPFYQS PDLHDSN FG KI+C
Sbjct: 61  DSAEEAARAYDNAARTLRGAKAKTNFPLHPSTISIQQQIPFYQSPPDLHDSNGFGAKIEC 120

Query: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD 180
           VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD
Sbjct: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD 180

Query: 181 EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
           EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL
Sbjct: 181 EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219

[Close]

BLAST of Moc02g06680 vs. NCBI nr
Match: XP_022947976.1 (ethylene-responsive transcription factor 3-like [Cucurbita moschata] >XP_022970780.1 ethylene-responsive transcription factor 3-like [Cucurbita maxima] >XP_022970781.1 ethylene-responsive transcription factor 3-like [Cucurbita maxima] >XP_023534086.1 ethylene-responsive transcription factor 3-like [Cucurbita pepo subsp. pepo] >KAG7034877.1 Ethylene-responsive transcription factor 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 417.5 bits (1072), Expect = 6.9e-113
Identity = 209/218 (95.87%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGRPSDPFTA EVPKSTVQ ENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTATEVPKSTVQRENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCV 120
           DSAEEAARAYDTAARSLRGAKAKTNFPLHPS ISIQQ IPFYQS PDL DSN FGKI+CV
Sbjct: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSTISIQQPIPFYQSPPDLIDSNGFGKIECV 120

Query: 121 QANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDE 180
           QANRPTSSSLSSTVESFSGPRISNPLSSLSMV RRPVQPVSPDDCHSDCDSSSSVVDDDE
Sbjct: 121 QANRPTSSSLSSTVESFSGPRISNPLSSLSMVPRRPVQPVSPDDCHSDCDSSSSVVDDDE 180

Query: 181 VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
           VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL
Sbjct: 181 VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 218

[Close]

BLAST of Moc02g06680 vs. NCBI nr
Match: KAG6604749.1 (Ethylene-responsive transcription factor 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416.0 bits (1068), Expect = 2.0e-112
Identity = 208/218 (95.41%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGRPSDPFTA EVPKSTVQ ENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTATEVPKSTVQRENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCV 120
           DSAEEAARAYDTAARSLRGAKAKTNFPLHPS ISIQQ IPFYQS PDL DSN FGKI+CV
Sbjct: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSTISIQQPIPFYQSPPDLIDSNGFGKIECV 120

Query: 121 QANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDE 180
           QANRPTSSSLSSTVESFSGPRISNPLSSLSMV RRPVQPVSPDDCHSDCDSSSSVVDDDE
Sbjct: 121 QANRPTSSSLSSTVESFSGPRISNPLSSLSMVPRRPVQPVSPDDCHSDCDSSSSVVDDDE 180

Query: 181 VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
           VCVLASFRRALPFDLNLPPP+DVVDLTGDDLQATALCL
Sbjct: 181 VCVLASFRRALPFDLNLPPPVDVVDLTGDDLQATALCL 218

[Close]

BLAST of Moc02g06680 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-52
Identity = 129/233 (55.36%), Postives = 148/233 (63.52%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENP--LKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLG 60
           MRRGR      A      T +P      KEIR+RGVRKRPWGR+AAEIRDPWKKTRVWLG
Sbjct: 1   MRRGR-----AAAAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLG 60

Query: 61  TFDSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKID 120
           TFDSAE+AARAYD AAR+LRG KAKTNFPL P A   Q       +     DS  + + +
Sbjct: 61  TFDSAEDAARAYDAAARALRGPKAKTNFPL-PYAHHHQFNQGHNPNNDPFVDSRFYPQDN 120

Query: 121 CVQANRPTSSSLSSTVESFSGPR---ISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSV 180
            + + RPTSSS+SSTVESFSGPR        ++ S  +     PV PDDCHSDCDSSSSV
Sbjct: 121 PIISQRPTSSSMSSTVESFSGPRPPPAPRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSV 180

Query: 181 VD----------DDEVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
           VD          D++    +SFR+ L FDLNLPPPMD  D   DDL  TALCL
Sbjct: 181 VDHGDCEKENDNDNDNIASSSFRKPLLFDLNLPPPMD--DAGADDLHCTALCL 225

[Close]

BLAST of Moc02g06680 vs. ExPASy Swiss-Prot
Match: O80339 (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-48
Identity = 127/235 (54.04%), Postives = 144/235 (61.28%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGR S   +A   P         +KEIR+RGVRKRPWGR+AAEIRDPWKK RVWLGTF
Sbjct: 1   MRRGRGS---SAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSA----------ISIQQQ---IPFYQSTPD 120
           DSAEEAARAYD+AAR+LRG KAKTNFP+  S+          I  Q Q    PF      
Sbjct: 61  DSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLF 120

Query: 121 LHDSNAFGKIDCVQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHS 180
                 F  +     NRPTSSS+SSTVESFSGPR    +   +  R     PV P+DCHS
Sbjct: 121 TDHQQQFPIV-----NRPTSSSMSSTVESFSGPR-PTTMKPATTKRYPRTPPVVPEDCHS 180

Query: 181 DCDSSSSVVDDDEVCVLASFRRALP--FDLNLPPPMDVVDL--TGDDLQATALCL 219
           DCDSSSSV+DDD+    +S RR  P  FDLN  PP+D VDL    DDL  T L L
Sbjct: 181 DCDSSSSVIDDDDDIASSSRRRNPPFQFDLNF-PPLDCVDLFNGADDLHCTDLRL 225

[Close]

BLAST of Moc02g06680 vs. ExPASy Swiss-Prot
Match: Q9LDE4 (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ERF7 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.2e-44
Identity = 124/251 (49.40%), Postives = 148/251 (58.96%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MR+GR S        P   V     +KE RYRGVRKRPWGR+AAEIRDP KK+RVWLGTF
Sbjct: 1   MRKGRGSSVVG----PALPVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQI-----------PFYQSTPD-- 120
           DSA +AARAYDTAAR+LRG KAKTNFP+  S  S  Q +           P  Q+  D  
Sbjct: 61  DSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPF 120

Query: 121 ----LHDSNAFGKIDCVQ-ANRPTSSSLSSTVESFSGPR----------ISNPLSSLSMV 180
               L+    F +    Q  +RP SSS+SSTV+S SGPR          ++ PL ++   
Sbjct: 121 MDHRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRY 180

Query: 181 RRRPVQPVSPDDCHSDCDSSSSVVDDDEVCVLASFRRALP--FDLNLPPPMDVVDLTG-- 219
            R P  PV+P+DCHSDCDSSSSV+DD +    +S RR  P  FDLN  PP+D VDL    
Sbjct: 181 PRTP--PVAPEDCHSDCDSSSSVIDDGDDIASSSSRRKTPFQFDLNF-PPLDGVDLFAGG 240

[Close]

BLAST of Moc02g06680 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 9.2e-28
Identity = 61/72 (84.72%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 16 PKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEEAARAYDTAAR 75
          P +T Q  N  KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTFD+AEEAARAYDTAAR
Sbjct: 10 PATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAR 69

Query: 76 SLRGAKAKTNFP 88
            RGAKAKTNFP
Sbjct: 70 DFRGAKAKTNFP 81

[Close]

BLAST of Moc02g06680 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.6e-25
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 24 NPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEEAARAYDTAARSLRGAKAK 83
          N +KE+ YRGVRKRPWGRYAAEIRDP KK+RVWLGTFD+AEEAA+AYDTAAR  RG KAK
Sbjct: 20 NGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAK 79

Query: 84 TNFPL 89
          TNFPL
Sbjct: 80 TNFPL 84

[Close]

BLAST of Moc02g06680 vs. ExPASy TrEMBL
Match: A0A6J1D794 (ethylene-responsive transcription factor 3 OS=Momordica charantia OX=3673 GN=LOC111017997 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 8.2e-120
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCV 120
           DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCV
Sbjct: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCV 120

Query: 121 QANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDE 180
           QANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDE
Sbjct: 121 QANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDE 180

Query: 181 VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
           VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL
Sbjct: 181 VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 218

[Close]

BLAST of Moc02g06680 vs. ExPASy TrEMBL
Match: A0A5A7UIU5 (Ethylene-responsive transcription factor 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00350 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.7e-114
Identity = 208/219 (94.98%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGRPSDPFTA E+P ST+QPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTATEIPNSTIQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFG-KIDC 120
           DSAEEAARAYD AAR+LRGAKAKTNFPLHPS ISIQQQIPFYQS PDLHDSN FG KI+C
Sbjct: 61  DSAEEAARAYDNAARTLRGAKAKTNFPLHPSTISIQQQIPFYQSPPDLHDSNGFGAKIEC 120

Query: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD 180
           VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD
Sbjct: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD 180

Query: 181 EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
           EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL
Sbjct: 181 EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219

[Close]

BLAST of Moc02g06680 vs. ExPASy TrEMBL
Match: A0A0A0KBH0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G167230 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.7e-114
Identity = 208/219 (94.98%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGRPSDPFTA E+P ST+QPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTATEIPNSTIQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFG-KIDC 120
           DSAEEAARAYD AAR+LRGAKAKTNFPLHPS ISIQQQIPFYQS PDLHDSN FG KI+C
Sbjct: 61  DSAEEAARAYDNAARTLRGAKAKTNFPLHPSTISIQQQIPFYQSPPDLHDSNGFGAKIEC 120

Query: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD 180
           VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD
Sbjct: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD 180

Query: 181 EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
           EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL
Sbjct: 181 EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219

[Close]

BLAST of Moc02g06680 vs. ExPASy TrEMBL
Match: A0A1S3C351 (ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC103496350 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.7e-114
Identity = 208/219 (94.98%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGRPSDPFTA E+P ST+QPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTATEIPNSTIQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFG-KIDC 120
           DSAEEAARAYD AAR+LRGAKAKTNFPLHPS ISIQQQIPFYQS PDLHDSN FG KI+C
Sbjct: 61  DSAEEAARAYDNAARTLRGAKAKTNFPLHPSTISIQQQIPFYQSPPDLHDSNGFGAKIEC 120

Query: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD 180
           VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD
Sbjct: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDD 180

Query: 181 EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
           EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL
Sbjct: 181 EVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219

[Close]

BLAST of Moc02g06680 vs. ExPASy TrEMBL
Match: A0A6J1I1I8 (ethylene-responsive transcription factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111469663 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.3e-113
Identity = 209/218 (95.87%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGRPSDPFTA EVPKSTVQ ENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTATEVPKSTVQRENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCV 120
           DSAEEAARAYDTAARSLRGAKAKTNFPLHPS ISIQQ IPFYQS PDL DSN FGKI+CV
Sbjct: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSTISIQQPIPFYQSPPDLIDSNGFGKIECV 120

Query: 121 QANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDE 180
           QANRPTSSSLSSTVESFSGPRISNPLSSLSMV RRPVQPVSPDDCHSDCDSSSSVVDDDE
Sbjct: 121 QANRPTSSSLSSTVESFSGPRISNPLSSLSMVPRRPVQPVSPDDCHSDCDSSSSVVDDDE 180

Query: 181 VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
           VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL
Sbjct: 181 VCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 218

[Close]

BLAST of Moc02g06680 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-49
Identity = 127/235 (54.04%), Postives = 144/235 (61.28%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGR S   +A   P         +KEIR+RGVRKRPWGR+AAEIRDPWKK RVWLGTF
Sbjct: 1   MRRGRGS---SAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSA----------ISIQQQ---IPFYQSTPD 120
           DSAEEAARAYD+AAR+LRG KAKTNFP+  S+          I  Q Q    PF      
Sbjct: 61  DSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLF 120

Query: 121 LHDSNAFGKIDCVQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHS 180
                 F  +     NRPTSSS+SSTVESFSGPR    +   +  R     PV P+DCHS
Sbjct: 121 TDHQQQFPIV-----NRPTSSSMSSTVESFSGPR-PTTMKPATTKRYPRTPPVVPEDCHS 180

Query: 181 DCDSSSSVVDDDEVCVLASFRRALP--FDLNLPPPMDVVDL--TGDDLQATALCL 219
           DCDSSSSV+DDD+    +S RR  P  FDLN  PP+D VDL    DDL  T L L
Sbjct: 181 DCDSSSSVIDDDDDIASSSRRRNPPFQFDLNF-PPLDCVDLFNGADDLHCTDLRL 225

[Close]

BLAST of Moc02g06680 vs. TAIR 10
Match: AT3G20310.1 (ethylene response factor 7 )

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-45
Identity = 124/251 (49.40%), Postives = 148/251 (58.96%), Query Frame = 0


Query: 1   MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MR+GR S        P   V     +KE RYRGVRKRPWGR+AAEIRDP KK+RVWLGTF
Sbjct: 1   MRKGRGSSVVG----PALPVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTF 60

Query: 61  DSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQI-----------PFYQSTPD-- 120
           DSA +AARAYDTAAR+LRG KAKTNFP+  S  S  Q +           P  Q+  D  
Sbjct: 61  DSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPF 120

Query: 121 ----LHDSNAFGKIDCVQ-ANRPTSSSLSSTVESFSGPR----------ISNPLSSLSMV 180
               L+    F +    Q  +RP SSS+SSTV+S SGPR          ++ PL ++   
Sbjct: 121 MDHRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRY 180

Query: 181 RRRPVQPVSPDDCHSDCDSSSSVVDDDEVCVLASFRRALP--FDLNLPPPMDVVDLTG-- 219
            R P  PV+P+DCHSDCDSSSSV+DD +    +S RR  P  FDLN  PP+D VDL    
Sbjct: 181 PRTP--PVAPEDCHSDCDSSSSVIDDGDDIASSSSRRKTPFQFDLNF-PPLDGVDLFAGG 240

[Close]

BLAST of Moc02g06680 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-29
Identity = 61/72 (84.72%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 16 PKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEEAARAYDTAAR 75
          P +T Q  N  KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTFD+AEEAARAYDTAAR
Sbjct: 10 PATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAR 69

Query: 76 SLRGAKAKTNFP 88
            RGAKAKTNFP
Sbjct: 70 DFRGAKAKTNFP 81

[Close]

BLAST of Moc02g06680 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 115.9 bits (289), Expect = 4.0e-26
Identity = 54/62 (87.10%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 27 KEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEEAARAYDTAARSLRGAKAKTNF 86
          KE+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTFD+AEEAARAYDTAAR  RG+KAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 87 PL 89
          PL
Sbjct: 89 PL 90

[Close]

BLAST of Moc02g06680 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-25
Identity = 86/190 (45.26%), Postives = 101/190 (53.16%), Query Frame = 0


Query: 17  KSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEEAARAYDTAARS 76
           K+     N    +RYRGVRKRPWGRYAAEIRDP+KK+RVWLGTFD+ EEAARAYD  A  
Sbjct: 6   KTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIE 65

Query: 77  LRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCVQANRPTSSSLSSTVES 136
            RGAKAKTNFP                     ++ NA     C+   +  S S SSTVES
Sbjct: 66  FRGAKAKTNFP--------------------CYNINA----HCLSLTQ--SLSQSSTVES 125

Query: 137 FSGPRISNPLSSLSMVRRRPVQPVSPD------DCHSDCDSSSSVVDDDEVCVLASFRRA 196
            S P ++  L S S+  R P   +         D  S+ DSSS V+D   V      R  
Sbjct: 126 -SFPNLN--LGSDSVSSRFPFPKIQVKAGMMVFDERSESDSSSVVMD---VVRYEGRRVV 163

Query: 197 LPFDLNLPPP 201
           L  DLN PPP
Sbjct: 186 LDLDLNFPPP 163

The following BLAST results are available for this feature:

BLAST of Moc02g06680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149613.1	1.7e-119	100.00	ethylene-responsive transcription factor 3 [Momordica charantia]	[more]
XP_038902603.1	3.6e-114	95.43	ethylene-responsive transcription factor 3-like [Benincasa hispida]	[more]
XP_004143195.1	1.4e-113	94.98	ethylene-responsive transcription factor 3 [Cucumis sativus] >XP_008456400.1 PRE...	[more]
XP_022947976.1	6.9e-113	95.87	ethylene-responsive transcription factor 3-like [Cucurbita moschata] >XP_0229707...	[more]
KAG6604749.1	2.0e-112	95.41	Ethylene-responsive transcription factor 3, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Moc02g06680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SXS8	1.1e-52	55.36	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]
O80339	1.6e-48	54.04	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9LDE4	3.2e-44	49.40	Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
O80340	9.2e-28	84.72	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9LW49	5.6e-25	83.08	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]

BLAST of Moc02g06680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D794	8.2e-120	100.00	ethylene-responsive transcription factor 3 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7UIU5	6.7e-114	94.98	Ethylene-responsive transcription factor 3-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0KBH0	6.7e-114	94.98	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G167230 PE=...	[more]
A0A1S3C351	6.7e-114	94.98	ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1I1I8	3.3e-113	95.87	ethylene-responsive transcription factor 3-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Moc02g06680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50640.1	1.2e-49	54.04	ethylene responsive element binding factor 3	[more]
AT3G20310.1	2.2e-45	49.40	ethylene response factor 7	[more]
AT3G15210.1	6.6e-29	84.72	ethylene responsive element binding factor 4	[more]
AT5G44210.1	4.0e-26	87.10	erf domain protein 9	[more]
AT1G28370.1	2.6e-25	45.26	ERF domain protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 31..42 score: 66.67 coord: 53..69 score: 71.55
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 30..93 e-value: 8.0E-36 score: 135.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 30..79 e-value: 8.0E-14 score: 51.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 30..87 score: 23.68309
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 30..87 e-value: 1.47361E-32 score: 110.439
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 29..89 e-value: 1.2E-27 score: 97.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..174
None	No IPR available	PANTHER	PTHR31677:SF157	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3	coord: 24..193
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 24..193
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 30..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g06680.1	Moc02g06680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity