Moc02g06170 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc02g06170
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Locationchr2: 4376645 .. 4382555 (+)
RNA-Seq ExpressionMoc02g06170
SyntenyMoc02g06170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAATGGCTCTCTATCGAGAAATCCGAGAATCGCCCATACCCAGATGCGATTTCAGATCAATAAACCACAGGGAACAAGAATGTCCGCAGAAATGGCCGATGCACCCAGATCCCTATATCTACCACAAATGTAGCCAGCGATTCTTCGTGGTGATTGAAATTGGTAATAAGCAATAACAGCCCACTTTAATCTAAATGCAATCTGGGGTCTCTAGAATTTATAAGAGACAAAGAAGAAGAAGAAGAAGGAAGCAAATGCAAGAATAGAGGAAGGTGCAGATGATATGATTGAAGAAATCACACCAAACTTGTACACCCCAAAAAAGCAGTCAAAAATAAAATAAAAAGAAAGAAAATTAATGAGAGAGAGATTAAGCAAGAGAGGAATAGAAATTGGGGGAGTGTGGTGGAATGTTGGTATCTTTTGATGGCTTAATTAGATCTGCGAAAGCCCCCCTTGTTTTTGTTTTTCCAAATTTTCTTTCACGACCCCAAAAAGCTACAGTTTTGCTCAACCCACGTAAATGGGCTCTTTCAAAATTCAACAAAATCAGCAGAGTAAATTAAGGAGGAACGATTATTATAATAACGTTCCTCCTTTTTTCCTTCTTCTGGGTTTGAACTTTGAAGAACAGTTGAAAGCCCAAATTTTTTTCTTTGGATATACAGACAAAGATTACCACTGCTCCTGATTCACTCACATGCTACAATTTTCTCTTGTCTCCCCAATTGATCTCTGTTTTCTTTAAGTTATTGCATCTAAGAATCTAACTCGCCATGCATCAGAAAAAATTAAAAATTCAGTAAACAATTAAAAAGAGGTTAACATCTAGTACTTTGCAGTCCACAATGCTAGATGGGGAAGATCTTAAGAAGTAATTAAATATGGGAATTTCAAAGAACCCAGCTTTTTTTTCCCCCTTAATTTAGTAAAAAATTCTTGAACATTGTTAATTATGGTGAAACTAATCAGAGAGTAACCTTAATTAGCAGAGAGGCATTGATTAGCCTATCAATCAGAAATCGGCATGATTAATGATGTCATTATTGGCTGAAAAAGTAGATGAGTAAAAAAGCTCGCAAATTGCTAATTAATTCAAAGGTAGTATCTGATTAATCGGGTTTTCTTGATTAAGAAATGGAGTAAATTTTCTTTTCCCTGTTGAGGTTATTGGAATTTGGAACAATCTGGCGTGTGAGAAAGAGGATCTGATTTGATTAATTATTTTGGGAGTCTTCAAGTTTTTAAAAATAATTAATGAGATCTGTTTTTGAGAAGTAGAAACCGACAAAAATGATGAATTGGGAGAGTTGGTAATTTGGAAAAAAAGAAAAAGAAAAAAGGAATTTCCTTTTTTTTTTTCTGGAATAATAATTTTAAGACCAAAAACTAAAAAGAGAGCAATTATTTTCTTATGGAGAAAGATGTCCACCACCACACGCATATCTCAGATTCTCAAAATGGAAACTCAAATTAATTAATTAATTAATTATTGTTGAATTATTGTTTTTTCGGAGTCTTTTTTCCAGAAGAGTAAGGAAAAAGAAAACCTTTGGCTGAACGTATATAAAAAAAAAGTCTGTGCAATTTGAGATTAATTCTTATTTCTCAAAAAAAAAAAAAAAAAAAATCTGTGCAATTTATTCTGTCTTTTTAACTTCCAAAATTATGAGAGTTTTACTATTTTACATTTTAGTGCTTGAAGTAATTATCAACTTCAAATTTTTGTTTAAAATTCAAATTTTTACAATTTAACTTTTTAGTTTTTAATTTTATATGAGTTAGTTTCTGTTATTATTATTATTTTTTAAATAAAGTTAAAAAGCTACTCCTCGATTTAGAAATGTGCTTTTTTCTTAGTCTAAAAAGACAAATTTTCTATTCACATGATCAATAATTCATTGACATATACCTGTGTAATTTTTTTCGAAGAGTCTATCGATTTGCTACACATTAAGTATGAATTCATAGCTAATCAGTGTGAAGCGAAGGATTTACCAAAAAGTTATTTTAAAATATCTATTTTAATATTTGTACCCTTGAAATGTAAAACTATTAAATAAAAATTTATTGCTATATTTCAAGAGATACGAGGAGTGAAATGTCTTACTAAAATCTCTTTGGTTAAAAAAAACTAATTTTAAGATTTATGACGGATATAGTTGGTAAAATAGATTTCAAAATTACCCTTTTGGACTCACACAAACTGCTTTGAAGGCTACCGACAGCAGCTATAACAAAGGGGAAGTACGTATTATTAAGATAGAAGTTGTACCAACTTTATTCTAAATCACTTTTGGGCAAGGCTTTTTTTAAACTGCATATCTAATTAAATGCTAAACCAAACAATTATTAGATTTGGTTGCTCATCTCAAACTTAATATATATATTTATATATGTGCATTACTGGCTAAATTATCATAATCCCTCGTTCCAAAATTAGGTCAAAGACTTAATCATAAAAAAAAATATGGTGGACCTAGTCTTAGGTCTTCTATTATCAAATGGTTGGTATAAGATTAATGAATTTAAAACAAGAAATTATCAGGCTTACTATTTTTTGAGATTAGCTTAGGTGGAAGGCTAAGGCATGGTTGGTGAGATACCACTTTGGACGAACTAAACCTCTCTAATCTCGTGTCACCATCTACAAATTAAGAGACAACTCTTTAAGTAGTAAATAGTTTTCTATGGGTATAGATAGACCTCCCAAAAGCTGAACTCATAAGTATTTAATTTACAAAAAAATGTTGATTATCTTACTTTGTCTAGGGACCAATTTCTTAATTTTTCTTATAACTTTCAAAAATACTTTTTGTTGGTCACCAAACGTAACTAAATAGTGGAAAACTATATTTTCTTAGTTGATTAGAGACACTACTTTTGAAACATTGAAAAAACAGTGACAAATCTCCTATCTACTACGGTAGCTTCCAATTAGATAAAGTAAACTAAGCATCCATCTTACATTCTCTCCGCAAGAAACGAATAAAGGGGAAAAAAAGAAGAAAAGAAGAGCAGCTTCAGTTAGACAATAACAGCAGCACACTGGAAGACAAACAAAGAAGAGAAGCCCACCAAAATTACAAAATTTCAAAGGCCATTAACGGCTCCAGTTTATTAGCGGAAGTCTTTTATAAACTTTTGTAAGGTTCTTTTTTTTTATACGAGATCCTTAACAGAGCACCAGAGTCGGGTAAGATAAGGGGCGTCTATGTCGACATTGAGAATGACAGATAATGGAGCTTCTTGCATTTAGGGAATAATGACTATGTCGTCTCTAAGGCTCACCACGTTTTTGTTTCGAGGATTCTATGATCCAATTTGAGGAATGGTTGTCGTCTCTTGATTTATTTCTCTCATGAATTTATTTTCAATTTCATCCCAGACAGAGACGAAGCCTATTTAGATACATATATAATATATTTGGTGTCCACAATTTTTCATGCTTGTTTCAATTCTAAAAATTTTAACTGGCCAAATTAGAGAAGCTTTTAATATTTAAATTTTTTTAAATATAAGACTAATGGGGTAATTTGTCATTTTTTCCCTCCCTTTGCTACAGTTGTTTGCATACATTCCGAATTTCATTTTTTTTACAAATCAACAATGTTAGTTATTTGATCACATCAACGTTAGTTTTAAAGGGATCCTTTATTTGGGGGCATCCAATAAAGTATAGCTAAACATAAAAATATAAGTTAAAAACTTGGATGCTCTTTGGGATGTGCGCCTCTTTCAGCCTTGTGACTGTTTCATCCAGAAAACTCGGGTTTTTCTGGTTTTTGTGTTTTTTTATTTGGTTTTGAACAGGAAGTGTAGGGATGGGTTCTGAAATATTGGTTAAGGAATGGGGCAAGTTGTCGTTGAAGTCAGAGGAGGAAGAGACGTCCGTAGACGTGGATGGGGCAGCGGCACTGGACATAGTAAAAAGATTGGAGGTAAGTTTGGTAGGGAAGCTTCTGCTAAAACGTAACATTAATAATGAGGTTCTAATTAATGTACTGAAGAATGTTTGGAGAATTGATGGAGAATTTGGGGTGCAAACCTTAAGGGCATAATGTCTTTCTATTCTGGTTCGAGTCTATGGCGGTTTGGAATAGGGTATTGAGAGGAGGGCCGTGGTTCTTCGACAAGGCGTTGATAGTAATGGAGAAACTTGTTTCAACCCTAAAATTGTCTGCCTTTAAATTCAGCAAGGTATCATTCTGGGTGCACTTTTGTGATTTGCCTTTGGTGTGTATGAGTGCTTCAATTGCAAAACGCCTTGTCAACGCTATAGGTCAGTTTGAGAGTGTGGATTGCCTGGAGGAGAAGTTTTGTTGGTGAAAAACCTTGAGGGTCCGAGTTTCTATAAATATAACAAAACCATTAAGGCGGGGTATCAAAGTGAATTTGGAGGGACCAATGGGTGGATGTTGGGTTCCAATTAAGTACGAAAAGTTGCCTGAATTTTGTTATTCTTGTGGTAAGATAGGACATACTAGATTGGAGTGCGATGAAGTGGTGATTGAGAGGCACGGGCAAGATCCAAGTTCCCAATATGGGTCTTGGCTCCGCTACCAGGGTGAAGGAAGAAGTGGAGGGAAGGAGTCAGAGATACCAACCAACTAAGGCAAGGGTGACAGAAATCAGTGTTCCGCATTCTGAAGATAATCAGTTAAGGGGGAAGGGGCGAGACCCCTCAGTGAAGGGGGTGGTGATTTCTTCGGAACAAGAAGGACTGCAGGGTGGAGTTGATCTTTCAATAGATGGCATAAGGAACTCTGTGGCTAGTGTGGGTTTAGATCATCGGGATGTGGAAGCTTCGACTGGGGCCATAAAATCTGGCAACATAGACCCAGGTAAGTCATTTAAAGGGTAGATTATGTGGATGCCCTGGAAGGAGGGGGCTATGGATTGGTGGATCTGATTGATGGAGAAGGGGAGAGGAGGAAGATAGTTTAAGAGGAGGGGTCTGATCTAAGGAAGGCGGAGGAAGGAACGACTTATGGAGCGAAGAAGTCGAGGTCAGAGTAAGGGAGAATGAGGTAGTGAGTCAGGTTTCAACAAAGGGGGATGGAGTGGAGACGATTTCAAGTGTTTGAGGTTGGAAAAGGAAAGCTCGGCAGATGGGGACCATTACAGAGATGGTTCCAAGCAGAGGTGTGGCAGAAGGAAGACGGAGGGGGGCCCGTTTGTAGAGGAAGTAGTAGCAAAATGACGTGAGTTGATGGTTGTGGTAGGAGGTGATGGGGTAAACACAAATGACACGATGAGATCGGCAGAGGCTAGTGACCAGCCCTGCCGGAAGCAACGAAAACCCTTTGTTGGAATGATCCGGGTTAAGTGTGACTTCTTGAGTCACAAAAATCCCCAAGTGCTTTTCTTGTCGGAAACTAAAAGTGATGGTATAGCAATGGAGAGACTTAAGCAAAGATTGAATCTACATGGCTGCTTCACAGTTGATAGTAGGGGGTCTAGTGGAGGACTTTGTTTGATGAGGAATTCAACTGTAAATGTCTCTATCTGGTCGTTCTCATCATATCATATTGATGCCGGTATTATATGGAAATCATATAGCTGGCGATTTACTGGGTTGCGGTTGGTGATCAATTTACTTGGAACGATAGAAGGAAGGAGGATGCACAAATTCAAGAACGTTTGGACCGTTTTTTGTGTAATAATGCTTTTCTGGAGATGGTTGATAACTACAAAATTAGATATCTTTAGTGGGGAAAGTCAATTGAATGCGGTATAACTGAGGAGAGTATGGGTCACCTCAGGATATGAAGGCAGAGACCATTTCGATTTGAGGAGATGTGGACATGGTACGAGAAGTGTGGATCTCTGATAGAGAGAGGAGAGAGGTGGCTGGATGGTGAAGCAGAGGGATTAAGTGTTGGGTGTGTTGCCCTAAACTCGTAG

mRNA sequence

ATGCTAATGGCTCTCTATCGAGAAATCCGAGAATCGCCCATACCCAGATGCGATTTCAGATCAATAAACCACAGGGAACAAGAATGTCCGCAGAAATGGCCGATGCACCCAGATCCCTATATCTACCACAAATGTAGCCAGCGATTCTTCGTGGTGATTGAAATTGGAAGTGTAGGGATGGGTTCTGAAATATTGGTTAAGGAATGGGGCAAGTTGTCGTTGAAGTCAGAGGAGGAAGAGACGTCCGTAGACGTGGATGGGGCAGCGGCACTGGACATAGTAAAAAGATTGGAGTCTATGGCGGTTTGGAATAGGGTATTGAGAGGAGGGCCGTGGTTCTTCGACAAGGCGTTGATAGTAATGGAGAAACTTGTTTCAACCCTAAAATTGTCTGCCTTTAAATTCAGCAAGGTATCATTCTGGGTGCACTTTTGTGATTTGCCTTTGGTGTGTATGAGTGCTTCAATTGCAAAACGCCTTGTCAACGCTATAGGACATACTAGATTGGAGTGCGATGAAGTGGTGATTGAGAGGCACGGGCAAGATCCAAGTTCCCAATATGGGTCTTGGCTCCGCTACCAGGATAATCAGTTAAGGGGGAAGGGGCGAGACCCCTCAGTGAAGGGGGTGGTGATTTCTTCGGAACAAGAAGGACTGCAGGGTGGAGTTGATCTTTCAATAGATGGCATAAGGAACTCTGTGGCTAGTGTGGGTTTAGATCATCGGGATGTGGAAGCTTCGACTGGGGCCATAAAATCTGGCAACATAGACCCAGGAGGTGATGGGGTAAACACAAATGACACGATGAGATCGGCAGAGGCTAGTGACCAGCCCTGCCGGAAGCAACGAAAACCCTTTGTTGGAATGATCCGGGTTAAGTGTGACTTCTTGAGTCACAAAAATCCCCAAGTGCTTTTCTTGTCGGAAACTAAAAGTGATGGTATAGCAATGGAGAGACTTAAGCAAAGATTGAATCTACATGGCTGCTTCACAGTTGATAGTAGGGGGTCTAGTGGAGGACTTTGTTTGATGAGGAATTCAACTGTAAATGTCTCTATCTGGTCGTTCTCATCATATCATATTGATGCCGGTATTATATGGAAATCATATAGCTGGCGATTTACTGGGTTGCGGTTGGTGATCAATTTACTTGGAACGATAGAAGGAAGGAGGATGCACAAATTCAAGAACAGACCATTTCGATTTGAGGAGATGTGGACATGGTACGAGAAGTGTGGATCTCTGATAGAGAGAGGAGAGAGGTGGCTGGATGGTGAAGCAGAGGGATTAAGTGTTGGGTGTGTTGCCCTAAACTCGTAG

Coding sequence (CDS)

ATGCTAATGGCTCTCTATCGAGAAATCCGAGAATCGCCCATACCCAGATGCGATTTCAGATCAATAAACCACAGGGAACAAGAATGTCCGCAGAAATGGCCGATGCACCCAGATCCCTATATCTACCACAAATGTAGCCAGCGATTCTTCGTGGTGATTGAAATTGGAAGTGTAGGGATGGGTTCTGAAATATTGGTTAAGGAATGGGGCAAGTTGTCGTTGAAGTCAGAGGAGGAAGAGACGTCCGTAGACGTGGATGGGGCAGCGGCACTGGACATAGTAAAAAGATTGGAGTCTATGGCGGTTTGGAATAGGGTATTGAGAGGAGGGCCGTGGTTCTTCGACAAGGCGTTGATAGTAATGGAGAAACTTGTTTCAACCCTAAAATTGTCTGCCTTTAAATTCAGCAAGGTATCATTCTGGGTGCACTTTTGTGATTTGCCTTTGGTGTGTATGAGTGCTTCAATTGCAAAACGCCTTGTCAACGCTATAGGACATACTAGATTGGAGTGCGATGAAGTGGTGATTGAGAGGCACGGGCAAGATCCAAGTTCCCAATATGGGTCTTGGCTCCGCTACCAGGATAATCAGTTAAGGGGGAAGGGGCGAGACCCCTCAGTGAAGGGGGTGGTGATTTCTTCGGAACAAGAAGGACTGCAGGGTGGAGTTGATCTTTCAATAGATGGCATAAGGAACTCTGTGGCTAGTGTGGGTTTAGATCATCGGGATGTGGAAGCTTCGACTGGGGCCATAAAATCTGGCAACATAGACCCAGGAGGTGATGGGGTAAACACAAATGACACGATGAGATCGGCAGAGGCTAGTGACCAGCCCTGCCGGAAGCAACGAAAACCCTTTGTTGGAATGATCCGGGTTAAGTGTGACTTCTTGAGTCACAAAAATCCCCAAGTGCTTTTCTTGTCGGAAACTAAAAGTGATGGTATAGCAATGGAGAGACTTAAGCAAAGATTGAATCTACATGGCTGCTTCACAGTTGATAGTAGGGGGTCTAGTGGAGGACTTTGTTTGATGAGGAATTCAACTGTAAATGTCTCTATCTGGTCGTTCTCATCATATCATATTGATGCCGGTATTATATGGAAATCATATAGCTGGCGATTTACTGGGTTGCGGTTGGTGATCAATTTACTTGGAACGATAGAAGGAAGGAGGATGCACAAATTCAAGAACAGACCATTTCGATTTGAGGAGATGTGGACATGGTACGAGAAGTGTGGATCTCTGATAGAGAGAGGAGAGAGGTGGCTGGATGGTGAAGCAGAGGGATTAAGTGTTGGGTGTGTTGCCCTAAACTCGTAG

Protein sequence

MLMALYREIRESPIPRCDFRSINHREQECPQKWPMHPDPYIYHKCSQRFFVVIEIGSVGMGSEILVKEWGKLSLKSEEEETSVDVDGAAALDIVKRLESMAVWNRVLRGGPWFFDKALIVMEKLVSTLKLSAFKFSKVSFWVHFCDLPLVCMSASIAKRLVNAIGHTRLECDEVVIERHGQDPSSQYGSWLRYQDNQLRGKGRDPSVKGVVISSEQEGLQGGVDLSIDGIRNSVASVGLDHRDVEASTGAIKSGNIDPGGDGVNTNDTMRSAEASDQPCRKQRKPFVGMIRVKCDFLSHKNPQVLFLSETKSDGIAMERLKQRLNLHGCFTVDSRGSSGGLCLMRNSTVNVSIWSFSSYHIDAGIIWKSYSWRFTGLRLVINLLGTIEGRRMHKFKNRPFRFEEMWTWYEKCGSLIERGERWLDGEAEGLSVGCVALNS
Homology
BLAST of Moc02g06170 vs. NCBI nr
Match: XP_042974662.1 (uncharacterized protein LOC122306298 [Carya illinoinensis])

HSP 1 Score: 87.4 bits (215), Expect = 3.3e-13
Identity = 55/154 (35.71%), Postives = 77/154 (50.00%), Query Frame = 0

Query: 290 IRVKCDFLSHKNPQVLFLSETKSDGIAMERLKQRLNLHGCFTVDSRGSSGGLCLMRNSTV 349
           +R   D +  ++P+VLFL ETK     MER++  +    CFTV S G SGGL L+  + V
Sbjct: 17  VRTLRDLVRREDPEVLFLMETKMSSWQMERIRVSMGFGCCFTVPSEGRSGGLALLWKNEV 76

Query: 350 NVSIWSFSSYHIDAGI--IWKSYSWRFTGLRL---------VINLLGT------------ 409
           N+SI SFS +HIDA I  I     W+FT L             +LL T            
Sbjct: 77  NLSIKSFSFFHIDAKISEIDNGLEWKFTSLYRHPETEKRVETWSLLRTLNEDAYSDHLPI 136

Query: 410 --IEGRRMHKFKNRPFRFEEMWTWYEKCGSLIER 419
             I     ++++ + FRFE MW   ++CG +I R
Sbjct: 137 ILIPSSSHNRYRQKLFRFEAMWVEDDECGDVISR 170

BLAST of Moc02g06170 vs. NCBI nr
Match: KAA3477524.1 (reverse transcriptase [Gossypium australe])

HSP 1 Score: 86.3 bits (212), Expect = 7.3e-13
Identity = 86/352 (24.43%), Postives = 142/352 (40.34%), Query Frame = 0

Query: 41  IYHKCSQRFFVVIEIGSVGMGSEILVKEWGKLSLKSEEEETSVDVDGAAALDIVKRLESM 100
           +Y      +F   E+  V M +E+++ ++G L  +S                        
Sbjct: 53  MYRVLKSLWFTKEEVNFVAMNNEVIIVKFGYLENRS------------------------ 112

Query: 101 AVWNRVLRGGPWFFDKALIVMEKLVSTLKLSAFKFSKVSFWVHFCDLPLVCMSASIAKRL 160
               R+L   PW FD  L  M   V    + ++ F    FW+   ++PL  M+  IA  L
Sbjct: 113 ----RILNLMPWNFDNCLFSMVPFVKGKAIDSYDFHMSPFWLRVFNIPLELMNRKIALDL 172

Query: 161 VNAIGHTRLECDEVVIERHGQDPSSQYGSWLRYQDNQLRGKGRDPSVKGVVISSEQEG-- 220
             AI  T  + + V         + QYG+WLR                  VI+   +G  
Sbjct: 173 GKAIEKTNSDEENV--------STLQYGNWLR-----------------AVIAPPDQGQG 232

Query: 221 -LQGGVDLSIDGIRNSVASVG--LDHRDVEASTGAIKSGNIDPGGDGVNTNDTMRSAEAS 280
             + GV++ +D    +    G  +D R+ E      K  + D   D ++T+  ++     
Sbjct: 233 IWRNGVEVIMDKPIGNGDREGSKMDTRE-EGEHLVQKEKDRDCVEDSMSTSPRVKGGGWL 292

Query: 281 DQP----------CRKQRKPFVGMIRVKCDFLSHKNPQVLFLSETKSDGIAMERLKQRLN 340
             P          CR    P   ++R     L   +P ++FL ETK    ++  ++ R  
Sbjct: 293 PAPPRAMKILCWNCRGVGNP--AIVRKLKQLLVANDPDIVFLCETKCHSNSLSHVRYRCK 348

Query: 341 LHGCFTVDSRGSSGGLCLMRNSTVNVSIWSFSSYHIDAGI-IWKSYSWRFTG 377
           + GC  VD+ G SG L LM    V V++ ++S YHID+ + +  S + RFTG
Sbjct: 353 MDGCLAVDAEGRSGDLALMWREGVKVTVQNYSKYHIDSLVNMEDSETIRFTG 348

BLAST of Moc02g06170 vs. NCBI nr
Match: XP_042939567.1 (uncharacterized protein LOC122274609 [Carya illinoinensis])

HSP 1 Score: 84.7 bits (208), Expect = 2.1e-12
Identity = 88/365 (24.11%), Postives = 142/365 (38.90%), Query Frame = 0

Query: 105 RVLRGGPWFFDKALIVMEKLVSTLKLSAFKFSKVSFWVHFCDLPLVCMSASIAKRLVNAI 164
           +V+ G PW FD  L V++      +     F KVSFW+H  +LPL CM+  + K++ +++
Sbjct: 172 KVMGGCPWLFDNYLFVLKDYDGDTQPHLISFDKVSFWIHMLNLPLSCMTIEMGKQIGDSV 231

Query: 165 GHTR-LECDEVVI------------ERHGQDPSS----QYGSWLRYQDNQLR---GKGRD 224
           G  R ++  E  +            E+ G+  S     QYG W+R      R   GK + 
Sbjct: 232 GLVREIDVQEDGVAWGRVLRGGCGEEQKGRQGSKGGDLQYGVWMRAIPGNRRWMDGKRKS 291

Query: 225 PSV--------------KGVVIS---SEQEGLQGGVDLSIDGIRNSVASVGLDH------ 284
            S               K V +S    E+E    G ++   G+  SV   G ++      
Sbjct: 292 MSTESGSDDTHGSFTGSKDVGVSMDGQEREKEDEGSNVEGKGVEGSVGGSGENNIIIHEV 351

Query: 285 -RDVEASTGAIKSG----------NIDPGGDG------------VNTNDTMRSAEASDQP 344
            ++VE   G               N+   G+               + + M   + +   
Sbjct: 352 VKEVERVVGKSSQNEEQDSQLILVNLAVQGEDEAIREEMVVETVQGSQENMHEGKKASWK 411

Query: 345 CRKQRKPFVG-------------------------MIRVKCDFLSHKNPQVLFLSETKSD 377
            R + +P  G                          ++  C         ++FL ET S 
Sbjct: 412 RRARGRPPSGKVGGGGCSSIMKIISWNCRGIGNPRTVQDLCLLTRENKANMVFLIETMSK 471

BLAST of Moc02g06170 vs. NCBI nr
Match: MBA0701569.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 80.9 bits (198), Expect = 3.1e-11
Identity = 79/354 (22.32%), Postives = 138/354 (38.98%), Query Frame = 0

Query: 81  TSVDVDGAAALD--IVKRLESMAVWNRVLRGGPWFFDKALIVMEKLVSTLKLSAFKFSKV 140
           T  +VD  A  D  I+ +       +R+L   PW F++ L +M   V   ++ +++F  V
Sbjct: 62  TKEEVDFVALKDNVIIVKFGCQEDRSRILNLSPWLFNRCLFLMLPFVKEQEIESYEFQMV 121

Query: 141 SFWVHFCDLPLVCMSASIA--------------------------------------KRL 200
            FW+   ++P+  M    A                                      +R+
Sbjct: 122 PFWLRIYNIPIELMDRQTALDVGNSIGELVVINWKDRYGSWTEFMRLKVKIDVSKPLRRI 181

Query: 201 V--------NAIGHTRLECDEVVIERHGQDPSSQYGSWLRYQ---DNQLRGKGRDPSVKG 260
           V          IGH+   C + V+E   +  + Q+G+W+R      NQ +G  R+    G
Sbjct: 182 VKFMDRDGIERIGHSLKGCTKNVLESGMRHTNLQFGNWVRAPAVIQNQDKGMRRN----G 241

Query: 261 VVISSEQEGLQGGVDLSIDGIRNSVASVGLDHR-----DVEASTGAIKSGNIDPGGDGVN 320
           V + +         D S+    N      +D +     +   ST  +++  +    +G  
Sbjct: 242 VEVFNSVARPSKNKDDSLTRSSNESWKPSMDGKERMPEEESLSTSPLENRKLKQIKEGNG 301

Query: 321 TNDTMRSAEAS-------DQPCRKQRKPFVG--------MIRVKCDFLSHKNPQVLFLSE 364
            + + R  + S       + P R+ ++   G         +R    FL    P +LFL E
Sbjct: 302 KSKSKRKRQKSLQGYFTFESPARQVKRRLGGSFSPSEAAAVRELKQFLVANVPDILFLCE 361

BLAST of Moc02g06170 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 80.5 bits (197), Expect = 4.0e-11
Identity = 52/163 (31.90%), Postives = 82/163 (50.31%), Query Frame = 0

Query: 60  MGSEILVKEWGKLSLKSEEEETSVDVDGAA----------------------ALDIVKRL 119
           M  E L+ +W K  L SEE+E ++DVD  A                      + D++ R+
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 120 ESMAVW--------------------------NRVLRGGPWFFDKALIVMEKLVSTLKLS 174
             +A W                          NRV++ GPWFFDKALIV++K  S+  +S
Sbjct: 61  LLLA-WKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNIS 120

BLAST of Moc02g06170 vs. ExPASy TrEMBL
Match: A0A2N9I611 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47331 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.8e-15
Identity = 84/293 (28.67%), Postives = 127/293 (43.34%), Query Frame = 0

Query: 105 RVLRGGPWFFDKALIVMEKLVSTLKLSAFKFSKVSFWVHFCDLPLVCMSASIAKRLVNAI 164
           RVL G PW FD+ ++++ +  S      F F     WV   DLPL  M+  + + + NA+
Sbjct: 91  RVLGGCPWLFDRHMLLLHEFDSLTPPREFIFKSSPLWVQVFDLPLYHMTEEVGELIGNAM 150

Query: 165 GHTRLECDEVVIERHGQDPSSQYGSWLRYQDNQL-------RGKGRDPSVKGVVISSEQE 224
           G          IE    +    +G +LRY+   L        G G    V     + +++
Sbjct: 151 GGH--------IETEVTEDGVGWGKYLRYERLPLFCHACGIIGHGEKECV--TRRNQQEQ 210

Query: 225 G----LQGGVDLSID-GIRNSVASVGLDHRDVEASTGAIKSGNIDPGGDGVNTNDTMRSA 284
           G    LQ G  L  D  I+ S  S G +    E     + +   +P          +R  
Sbjct: 211 GRVGTLQYGAWLRADFHIKRSGQSFGPNPTAAEEEEDEVVAETKEPMQKEAGECSNLRRV 270

Query: 285 EASDQPCRKQRKPFVG---------MIRVKCDFLSHKNPQVLFLSETKSDGIAMERLKQR 344
              ++   ++R    G          +R   D    K P+VLFLSETK +   ME ++  
Sbjct: 271 GKGEEHREQERCLTEGGSRGLGNPRAVRTLRDLQKMKAPKVLFLSETKLNVEEMEWIRVG 330

Query: 345 LNLHGCFTVDSRGSSGGLCLMRNSTVNVSIWSFSSYHIDAGIIWKSYSWRFTG 377
           L     F V S+G SGGL L+ +  V++SI S++ +HIDA I  +   WRFTG
Sbjct: 331 LKYDSAFVVPSKGRSGGLALLWDEDVDLSITSYTRFHIDAQIKSQEGLWRFTG 373

BLAST of Moc02g06170 vs. ExPASy TrEMBL
Match: A0A5B6W8D4 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_011406 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.5e-13
Identity = 86/352 (24.43%), Postives = 142/352 (40.34%), Query Frame = 0

Query: 41  IYHKCSQRFFVVIEIGSVGMGSEILVKEWGKLSLKSEEEETSVDVDGAAALDIVKRLESM 100
           +Y      +F   E+  V M +E+++ ++G L  +S                        
Sbjct: 53  MYRVLKSLWFTKEEVNFVAMNNEVIIVKFGYLENRS------------------------ 112

Query: 101 AVWNRVLRGGPWFFDKALIVMEKLVSTLKLSAFKFSKVSFWVHFCDLPLVCMSASIAKRL 160
               R+L   PW FD  L  M   V    + ++ F    FW+   ++PL  M+  IA  L
Sbjct: 113 ----RILNLMPWNFDNCLFSMVPFVKGKAIDSYDFHMSPFWLRVFNIPLELMNRKIALDL 172

Query: 161 VNAIGHTRLECDEVVIERHGQDPSSQYGSWLRYQDNQLRGKGRDPSVKGVVISSEQEG-- 220
             AI  T  + + V         + QYG+WLR                  VI+   +G  
Sbjct: 173 GKAIEKTNSDEENV--------STLQYGNWLR-----------------AVIAPPDQGQG 232

Query: 221 -LQGGVDLSIDGIRNSVASVG--LDHRDVEASTGAIKSGNIDPGGDGVNTNDTMRSAEAS 280
             + GV++ +D    +    G  +D R+ E      K  + D   D ++T+  ++     
Sbjct: 233 IWRNGVEVIMDKPIGNGDREGSKMDTRE-EGEHLVQKEKDRDCVEDSMSTSPRVKGGGWL 292

Query: 281 DQP----------CRKQRKPFVGMIRVKCDFLSHKNPQVLFLSETKSDGIAMERLKQRLN 340
             P          CR    P   ++R     L   +P ++FL ETK    ++  ++ R  
Sbjct: 293 PAPPRAMKILCWNCRGVGNP--AIVRKLKQLLVANDPDIVFLCETKCHSNSLSHVRYRCK 348

Query: 341 LHGCFTVDSRGSSGGLCLMRNSTVNVSIWSFSSYHIDAGI-IWKSYSWRFTG 377
           + GC  VD+ G SG L LM    V V++ ++S YHID+ + +  S + RFTG
Sbjct: 353 MDGCLAVDAEGRSGDLALMWREGVKVTVQNYSKYHIDSLVNMEDSETIRFTG 348

BLAST of Moc02g06170 vs. ExPASy TrEMBL
Match: A0A2N9FHA2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14056 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.6e-13
Identity = 82/279 (29.39%), Postives = 126/279 (45.16%), Query Frame = 0

Query: 106 VLRGGPWFFDKALIVMEKLVSTLKLSAFKFSKVSFWVHFCDLPLVCMSASIAKRLVNAIG 165
           V+   PW FDK LI+ +++   +  S   F+  +FWV   DLP   M+ ++ +++   +G
Sbjct: 86  VMANVPWSFDKFLILFKRIDDDVSFSNVVFNSCAFWVQIHDLPPRHMTIAVCEKIAGTLG 145

Query: 166 HTRLECDEVVIERHGQDPSSQYGSWLRYQDNQLRGKGRDPSVKGVVISSEQE-GLQGGVD 225
             ++E  E V+E           +W R+   +    G  PS+K    +   E G+ G   
Sbjct: 146 --KVEYVE-VLEEGSNRAIWSLAAW-RFLAFRGSTMGGPPSMKKQQTTMATEPGVTG--- 205

Query: 226 LSIDGIRNSVASVGLDHRDVEASTGAIKSGNIDPGGDGVNTNDTMRSAEASDQ------P 285
             + G++     +G   RD+        SG +       + N T   A   D        
Sbjct: 206 --LTGLKEVNPVMG---RDISGKCADASSGQLFEFKFKYSANWTGCLATPPDAMSCLAWN 265

Query: 286 CRKQRKPFVGMIRVKCDFLSHKNPQVLFLSETKSDGIAMERLKQRLNLHGCFTVDSRGSS 345
           CR    P    +      +  K+P VLFLS TK D   +E L+      G F V SRG S
Sbjct: 266 CRGLGNP--QTVHELSIMVRKKDPIVLFLSVTKLDENRLEVLRCHWRFGGKFVVPSRGQS 325

Query: 346 GGLCLMRNSTVNVSIWSFSSYHIDAGIIWKS-YSWRFTG 377
           GGL +  +  + VSI S+S YHIDA + ++S  +WRFTG
Sbjct: 326 GGLVMFWSGHMGVSISSYSQYHIDAVLDYQSTNAWRFTG 350

BLAST of Moc02g06170 vs. ExPASy TrEMBL
Match: A0A2N9FGD9 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14067 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.0e-12
Identity = 93/336 (27.68%), Postives = 145/336 (43.15%), Query Frame = 0

Query: 105 RVLRGGPWFFDKALIVMEKLVSTLKLSAFKFSKVSFWVHFCDLPLVCMSASIAKRLVNAI 164
           RVL  G W FDK LI+++++      S   F + SFWV   DL + CM++ + +++ N +
Sbjct: 85  RVLANGLWSFDKYLILLKRIDDDQSFSHVVFDQCSFWVQIHDLLVRCMNSKVCEKIGNTL 144

Query: 165 GHTRLECDEVVIERHGQDPSSQYGSWLRYQDNQLRGKGRDPSVKGVVISSEQEGLQG-GV 224
           G  R+E  E   E  G        S +      + G+  D   + +   S     +G G 
Sbjct: 145 G--RVEQVEEFDEGCGGGNFDAGASGIGCNTTSVPGR-MDRGSRVIFPDSHVVRRRGDGK 204

Query: 225 DLSIDGIRNSV-----ASVGLDHRDVEASTGAIKSGN------IDPGGD--GVNTNDTMR 284
            L     R +        +GL+H ++  S   +  G+      I   G+    N+N  + 
Sbjct: 205 HLESSRPRRAKLKEIDRELGLEHGEINESLEILLQGDPYFKFQIPKAGELSHENSNAGLE 264

Query: 285 SAEA-----------SDQPCRKQRKPFV---------GMIRVKCDF-------------- 344
           + EA           S  P R  +K  V          +  + C F              
Sbjct: 265 TCEANGPQSFGHIVDSSGPQRPTKKANVNIGGGCNATSLDAISCLFWNCRGLGNPQTVHE 324

Query: 345 ----LSHKNPQVLFLSETKSDGIAMERLKQRLNLHGCFTVDSRGSSGGLCL--MRNSTVN 386
               +  K+P VLFLSETK D   +E L+   +  G F V SRG SGGL L  +R +TV+
Sbjct: 325 LTIMVKQKDPLVLFLSETKLDEKRLEVLRCTWSFVGKFVVPSRGQSGGLALFWLRGTTVS 384

BLAST of Moc02g06170 vs. ExPASy TrEMBL
Match: A0A2N9G4F4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25428 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-12
Identity = 79/337 (23.44%), Postives = 133/337 (39.47%), Query Frame = 0

Query: 62  SEILVKEWGKLSLKSEEEETSVDVD--------------GAAALDIVKRLESMA---VWN 121
           S  L++ W K S+ +EEE   V+                 A   D+   L  +    V +
Sbjct: 2   SATLIELWAKCSMNAEEEAVEVEEKVVEETKRGRWRPRFRAQMKDLGNNLFIIVFNDVMD 61

Query: 122 R--VLRGGPWFFDKALIVMEKLVSTLKLSAFKFSKVSFWVHFCDLPLVCMSASIAKRLVN 181
           R  V+  GPW FDK L++M        +   + ++ SFW+   +LPL  M+  +A  +  
Sbjct: 62  RDIVMMNGPWAFDKNLVMMRPFDGNQTIQDVQLTEASFWIQISELPLKGMNEEVAVLVGR 121

Query: 182 AIGHTRLECDEVVIERHGQDPSSQYGSWLRYQDNQL-RGKGRDPSVKGVVISSEQEGLQG 241
            +G        V+ E    +    +G +LR +  ++ R  G +    G  + +       
Sbjct: 122 GLG--------VLEEIDAPEDGIAWGEFLRVKTEKMGRDNGGNTKAYGPWLRA------- 181

Query: 242 GVDLSIDGIRNSVASVGLDHRDVEASTGAIKSGNIDPGGDGVNTNDTMRSAEASDQPCRK 301
               S+   + +  ++     D         + +  P     +   T     A +     
Sbjct: 182 ----SLGRWKPATTTITGGRSDSLGKNPGTSAPHTAPSQAETSVTGTKEKVTADEALATI 241

Query: 302 QRKPFVGMIRVKCDFLSHKNPQVLFLSETKSDGIAMERLKQRLNLHGCFTVDSRGSSGGL 361
             K  V  +    D +   NP +LFL E +   IA+E ++  L  +  FTV S G  GGL
Sbjct: 242 TEKVTVRSLH---DLVRENNPNILFLMERRMKAIAVEGIRIHLRFNSVFTVSSNGRKGGL 301

Query: 362 CLMRNSTVNVSIWSFSSYHIDAGIIWKSYS--WRFTG 377
            +    T+++ I +FS  HIDA I   +    WR TG
Sbjct: 302 AMFWRDTIDLEIRNFSRNHIDAIIKDSTVGKMWRLTG 316

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_042974662.13.3e-1335.71uncharacterized protein LOC122306298 [Carya illinoinensis][more]
KAA3477524.17.3e-1324.43reverse transcriptase [Gossypium australe][more]
XP_042939567.12.1e-1224.11uncharacterized protein LOC122274609 [Carya illinoinensis][more]
MBA0701569.13.1e-1122.32hypothetical protein [Gossypium aridum][more]
XP_022156185.14.0e-1131.90uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9I6113.8e-1528.67Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47331 PE=4 SV=1[more]
A0A5B6W8D43.5e-1324.43Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_011406 PE=4 SV=1[more]
A0A2N9FHA24.6e-1329.39Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14056 PE=4 SV=1[more]
A0A2N9FGD91.0e-1227.68Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9G4F43.0e-1223.44Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25428 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 434..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..273
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 95..166
e-value: 3.1E-12
score: 46.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc02g06170.1Moc02g06170.1mRNA