Moc02g06080 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g06080
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	tetraspanin-19
Location	chr2: 4325752 .. 4328484 (-)
RNA-Seq Expression	Moc02g06080
Synteny	Moc02g06080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAAGAGTCTGCATGCAATCTTTGTTGAAGTTCGTGAATTCTGGAAATGGGATGATGGGATTCGCCATGATTCTGTATGGAGTTTGGTTGATGAGGGCTTGGCAGAGACAGATGGGTCATTTGCCCTTTGAAGGACCCGATGCCCCAGTTCCATGGTATTGCTTTCTACCTGTTTTGCAGATTATATCATTTCCGATTTCCTTCCATTTTATTGGTCTATTTTTGTTTCTTCATATGATTTTGGAGGGACAGGAAGCGCTTCTCCTAGAAGATAACTTCACTTCGAACAGTGAAGAGCATTATGAAATTATAGTTTGATGATTTCTGTATCTCCTCCTAAAGTTTTTTGTCCCGACAAAATTCCGGGCAAGAAAGCTGCTGATTCTTTTGTTTGTGGTTAAGAGGGAGCTTGAGAAAGTTTGAAAGTCTGAGGAGTTTTTTTTTTCCTTCTAATTTCTGCTTGCTCTTAGTAATTTCTCTTTAAATGGGCCTGTGTCTGGGGAGAAAAGTCATTCATTAGGGAGCATAATCTCAAATAATAATGAATTAGAGTGGGTTTTCGAATTCCATACTTCCCTCATAAGAAAAAAGAGAGAGAAATTCATTACCTTCAAATCTGAGTGTTCATTGCTTCAAAATTTAGAATTATCTTCATATTCTTTATTCTTTCTGCATAATGATTTCTTTGTTTTGTAGAATACCTTCTAAACGTTTATTTTCTTTACTCAATAAAATAAAGGGTAATAGGTTAAGATGAATCTATGAATTTAAGCAAACTTGTAAGGAGTATTACAGTTAATATGGTTGAGATTTGGGTTCTGTGGCAATTGGTTGATGGGAAGACAATGGGGATGCCTTGTGGTATGTAGCTTACATCTTTTGTGTTGCTTAAATTTCAGGTTCATGTACAGTTTTTTTGGACAAGGCTTTCTTTTATGTGTGATCACTTGCTTGGGTCACATTGCTGCTGAAACTGCTAATCGTTGTTGCCTTCATATGGTACTGTCTTCTTAAATTTACTAAATCATATGAATCCCCCCACCCCCCACCCCCCTTCCCCCATTTTTCTTTTCCTTTTCTTAATAGATTGGTTGACATATGACTCTGTTTTGGCCTTCAATGGACGCAGTACATGATTATTATGTTTCTGCTTCTTATGGTGGAGGCCGGGTTGACTACTGACATATTTCTGAATCGTGACTGGGAGGAGGTGAAATTCTTACATACTCAAGGCGATACAACTGGATGCTACCGAATATATGTTCGTATAGCTGATTACTTTTAACTTTACACCAGGACTTCCCAGAGGATCCAAGTGGAAGTTTTGATCAGTTCAAACATTTCATCAGATTGAACTTCAATATCTGCAAATGGATAGGGATCACAATGGTGTCAATTCAGGTCTCTAGCTCTCTTTTTTCTCTCATGTTGGCCAGTGTCTTGAGGTATATTCCTTGTGAAAAACTTGCAATGTCGATTGGCTTGTCTCAGGGTTTGTCTCTCTTGTTGGCAATGATACTAAAAGCAATCGGAGCGCGTCGATATTATGACAGCGACGATGACTATGCTCCTGAGAAGCTTCCACTTATTAAGAATGCTGCTCTTCATTCACCAGCTACAATTGTTGTTGGTGACCCCGTCTTTGCATCTAAAAACAACACATGGAATAAAACCGACGACGACAAGGTATAAACACACAATCATGTTCCTATCTATGGGGTTGTCATACATATATGACGCTCAACATCTTTTATCTTGTTCCATTTTATTGGCATTTATTAAATTCTTGCCATTTATTTTGCATCTGCCTTCATTTGTTCTCAATTTTCTGCTCTGATATTTTGCACCAACATTTACTGCTGATCTCCCATTCTAGAAGTGATTTTAATCTTGTCTTAAGCTGATAAAAACTGTTCATCCATCCATCTTGAGTTTATTGTTAGATTAGATTCTACATAACGATTTCCACCATTTTCACAGCCCAAGTTATTGAGCATACTGATCCCTGTTTATGCCATAAACTCTATAACATGAATCTTATCTGATTTCTTTGGCCTTTGTAGTGAACCTGTAACAGAAGCGCGCAGTATATAAACTTGCATTGAATCCTTCCATTATATTTTAGGTCCTTCATTTCCTCCACTGGACTCGTTTACTTATGTTAGGCTAAATTACAAAAAATACGCCTAGACTTTGCCTTCAATACGGCCTTTGACATTTCATAAACATTTCAAAAATACCGTTTGAGCAAACATCCATTAATATTTTGAATGGACACGTGACATGACAAAATCTGAAAATTAACATTAGAACTAGATTAAATCTAAAAGAGATAAAAAATGAGGAAGAAGCTATCGTTTTTAAAATAAAGAATTAGGACGAAATTGGGTAGACAGTGGAGAAACAAATAGTCGGTTGACAATGGAGGAAAGAGACTTTTGGGGGGTGTTAATTGTCATATCATTCTAGATTTTGCCATGTCAACTTTCCATTCAAAATATTAATTGATGTTTGCTCAGATATTTTTGAAATGTTTATGAAAATTCAACGATAATACTAGCTACTAAAAAAAAAAAATAAATCAACGGTAGTACTAGAACTGTAGAAAAGATAGAAGTATTTTTGAAATAAATGACAAAGTTCAGGGATACTGTATTTTAGTGTTTATATTATGTATTGACTTTATATTAATTCATTATTTATTCTTTTTCCTCCCAGGAAAGAAATTAG

mRNA sequence

ATGCTAAGAGTCTGCATGCAATCTTTGTTGAAGTTCGTGAATTCTGGAAATGGGATGATGGGATTCGCCATGATTCTGTATGGAGTTTGGTTGATGAGGGCTTGGCAGAGACAGATGGGTCATTTGCCCTTTGAAGGACCCGATGCCCCAGTTCCATGGTTCATGTACAGTTTTTTTGGACAAGGCTTTCTTTTATGTGTGATCACTTGCTTGGGTCACATTGCTGCTGAAACTGCTAATCGTTGTTGCCTTCATATGTACATGATTATTATGTTTCTGCTTCTTATGGTGGAGGCCGGGTTGACTACTGACATATTTCTGAATCGTGACTGGGAGGAGGACTTCCCAGAGGATCCAAGTGGAAGTTTTGATCAGTTCAAACATTTCATCAGATTGAACTTCAATATCTGCAAATGGATAGGGATCACAATGGTGTCAATTCAGGGTTTGTCTCTCTTGTTGGCAATGATACTAAAAGCAATCGGAGCGCGTCGATATTATGACAGCGACGATGACTATGCTCCTGAGAAGCTTCCACTTATTAAGAATGCTGCTCTTCATTCACCAGCTACAATTGTTGTTGGTGACCCCGTCTTTGCATCTAAAAACAACACATGGAATAAAACCGACGACGACAAGGAAAGAAATTAG

Coding sequence (CDS)

ATGCTAAGAGTCTGCATGCAATCTTTGTTGAAGTTCGTGAATTCTGGAAATGGGATGATGGGATTCGCCATGATTCTGTATGGAGTTTGGTTGATGAGGGCTTGGCAGAGACAGATGGGTCATTTGCCCTTTGAAGGACCCGATGCCCCAGTTCCATGGTTCATGTACAGTTTTTTTGGACAAGGCTTTCTTTTATGTGTGATCACTTGCTTGGGTCACATTGCTGCTGAAACTGCTAATCGTTGTTGCCTTCATATGTACATGATTATTATGTTTCTGCTTCTTATGGTGGAGGCCGGGTTGACTACTGACATATTTCTGAATCGTGACTGGGAGGAGGACTTCCCAGAGGATCCAAGTGGAAGTTTTGATCAGTTCAAACATTTCATCAGATTGAACTTCAATATCTGCAAATGGATAGGGATCACAATGGTGTCAATTCAGGGTTTGTCTCTCTTGTTGGCAATGATACTAAAAGCAATCGGAGCGCGTCGATATTATGACAGCGACGATGACTATGCTCCTGAGAAGCTTCCACTTATTAAGAATGCTGCTCTTCATTCACCAGCTACAATTGTTGTTGGTGACCCCGTCTTTGCATCTAAAAACAACACATGGAATAAAACCGACGACGACAAGGAAAGAAATTAG

Protein sequence

MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFGQGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPSGSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPLIKNAALHSPATIVVGDPVFASKNNTWNKTDDDKERN

Homology

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BLAST of Moc02g06080 vs. NCBI nr
Match: XP_022140710.1 (tetraspanin-19 [Momordica charantia])

HSP 1 Score: 437.6 bits (1124), Expect = 6.4e-119
Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG
Sbjct: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
           QGFLLCVITCLGHIAAETANRCCLHM +    LLLMVEAGLTTDIFLNRDWEEDFPEDPS
Sbjct: 61  QGFLLCVITCLGHIAAETANRCCLHMVLXXXXLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180
           GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL
Sbjct: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180

Query: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDKERN 217
           IKNAALHSPATIVVGDPVFASKNNTWNKTDDDKERN
Sbjct: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDKERN 216

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BLAST of Moc02g06080 vs. NCBI nr
Match: XP_038902884.1 (tetraspanin-19 isoform X1 [Benincasa hispida])

HSP 1 Score: 372.5 bits (955), Expect = 2.5e-99
Identity = 171/213 (80.28%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           MLR+CMQSLLKFVNSGNGM+G AMILYG+WL+RAWQR  GHLP+ GP  P+PWFMYSFFG
Sbjct: 80  MLRICMQSLLKFVNSGNGMVGIAMILYGIWLIRAWQRHFGHLPY-GPSDPIPWFMYSFFG 139

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
            G LLCVITCLGHIAAETAN CCLH+YM+++F++LMVEAG+TTD+FLNRDWEEDFP+DPS
Sbjct: 140 LGILLCVITCLGHIAAETANGCCLHLYMVLVFMVLMVEAGVTTDVFLNRDWEEDFPKDPS 199

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180
           GSFDQFKHFI+LNF+ICKWIGI+MVSIQGLSLLLAM+LKAIG+RRYYDSDD+YA E+LPL
Sbjct: 200 GSFDQFKHFIKLNFDICKWIGISMVSIQGLSLLLAMVLKAIGSRRYYDSDDEYASERLPL 259

Query: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDK 214
           +KN ALHSP T V+GDPVF SKN+TWNK  DD+
Sbjct: 260 LKN-ALHSPTTCVIGDPVFPSKNDTWNKRTDDE 290

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BLAST of Moc02g06080 vs. NCBI nr
Match: XP_038902885.1 (tetraspanin-19 isoform X2 [Benincasa hispida] >XP_038902886.1 tetraspanin-19 isoform X2 [Benincasa hispida])

HSP 1 Score: 372.5 bits (955), Expect = 2.5e-99
Identity = 171/213 (80.28%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           MLR+CMQSLLKFVNSGNGM+G AMILYG+WL+RAWQR  GHLP+ GP  P+PWFMYSFFG
Sbjct: 4   MLRICMQSLLKFVNSGNGMVGIAMILYGIWLIRAWQRHFGHLPY-GPSDPIPWFMYSFFG 63

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
            G LLCVITCLGHIAAETAN CCLH+YM+++F++LMVEAG+TTD+FLNRDWEEDFP+DPS
Sbjct: 64  LGILLCVITCLGHIAAETANGCCLHLYMVLVFMVLMVEAGVTTDVFLNRDWEEDFPKDPS 123

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180
           GSFDQFKHFI+LNF+ICKWIGI+MVSIQGLSLLLAM+LKAIG+RRYYDSDD+YA E+LPL
Sbjct: 124 GSFDQFKHFIKLNFDICKWIGISMVSIQGLSLLLAMVLKAIGSRRYYDSDDEYASERLPL 183

Query: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDK 214
           +KN ALHSP T V+GDPVF SKN+TWNK  DD+
Sbjct: 184 LKN-ALHSPTTCVIGDPVFPSKNDTWNKRTDDE 214

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BLAST of Moc02g06080 vs. NCBI nr
Match: KAA0062078.1 (tetraspanin-19 [Cucumis melo var. makuwa] >TYK04942.1 tetraspanin-19 [Cucumis melo var. makuwa])

HSP 1 Score: 369.0 bits (946), Expect = 2.8e-98
Identity = 166/213 (77.93%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           +LR CMQSLLKFVNSGNGM+G AMILYG+WLMRAWQR +GHLP+EGP  P+PWFMYSF G
Sbjct: 4   ILRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPYEGPSDPIPWFMYSFLG 63

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
            G LLCVITCLGHIAAETAN CCLH+YM+++F+++MVEAG+TTD+FLNRDW EDFP+DPS
Sbjct: 64  LGILLCVITCLGHIAAETANGCCLHLYMLLLFMVIMVEAGVTTDVFLNRDWAEDFPKDPS 123

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180
           G FDQFKHFI+ NFNICKWIGI+ VSIQGLSLLLAM+LKAIG+RRYY+SDD+YAPE+LP 
Sbjct: 124 GCFDQFKHFIKSNFNICKWIGISTVSIQGLSLLLAMVLKAIGSRRYYESDDEYAPERLPF 183

Query: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDK 214
           +KN ALHSP T V+GDPVF SKN+TWNK  DD+
Sbjct: 184 LKN-ALHSPTTCVIGDPVFPSKNDTWNKRTDDE 215

[Close]

BLAST of Moc02g06080 vs. NCBI nr
Match: XP_008448284.1 (PREDICTED: tetraspanin-19 [Cucumis melo])

HSP 1 Score: 369.0 bits (946), Expect = 2.8e-98
Identity = 166/213 (77.93%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           +LR CMQSLLKFVNSGNGM+G AMILYG+WLMRAWQR +GHLP+EGP  P+PWFMYSF G
Sbjct: 4   ILRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPYEGPSDPIPWFMYSFLG 63

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
            G LLCVITCLGHIAAETAN CCLH+YM+++F+++MVEAG+TTD+FLNRDW EDFP+DPS
Sbjct: 64  LGILLCVITCLGHIAAETANGCCLHLYMLLLFMVIMVEAGVTTDVFLNRDWAEDFPKDPS 123

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180
           G FDQFKHFI+ NFNICKWIGI+ VSIQGLSLLLAM+LKAIG+RRYY+SDD+YAPE+LP 
Sbjct: 124 GCFDQFKHFIKSNFNICKWIGISTVSIQGLSLLLAMVLKAIGSRRYYESDDEYAPERLPF 183

Query: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDK 214
           +KN ALHSP T V+GDPVF SKN+TWNK  DD+
Sbjct: 184 LKN-ALHSPTTCVIGDPVFPSKNDTWNKRTDDE 215

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BLAST of Moc02g06080 vs. ExPASy Swiss-Prot
Match: Q940P5 (Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.8e-68
Identity = 121/208 (58.17%), Postives = 156/208 (75.00%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           ++R C+QS+LK VNS  GM+G AMILY VWL+R WQ QMG+LPF   D PVPWF+YSF G
Sbjct: 4   IVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFADSDHPVPWFIYSFLG 63

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
            G +LCV+TC GHIAAET N CCL++YM  + LL MVE G+  DIFLNRDW++DFPEDPS
Sbjct: 64  LGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPS 123

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIG--ARRYYDSDDDYAPEKL 180
           G+F QF  FI  NF ICKWIG+++V +QGLS+L+AM+LKA+G    R+YDSDD+Y    +
Sbjct: 124 GAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTV 183

Query: 181 PLIKNAALHSPATIVVGDPVFASKNNTW 207
            L+++A    P   VVG+P++ +K   W
Sbjct: 184 ALLQDA--RQPPPYVVGEPMYGAKPGAW 209

[Close]

BLAST of Moc02g06080 vs. ExPASy Swiss-Prot
Match: Q93XY5 (Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.4e-30
Identity = 71/203 (34.98%), Postives = 103/203 (50.74%), Query Frame = 0


Query: 4   VCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGP---------------- 63
           V   S LK +N     +G ++I+Y +W++  + R   HLP + P                
Sbjct: 8   VSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSR---HLPVDPPPSASSSSGTEIATSVS 67

Query: 64  -----------------------------DAPVPWFMYSFFGQGFLLCVITCLGHIAAET 123
                                        D P PWF+YSF   G L+C++T +G IAAE 
Sbjct: 68  EPLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEA 127

Query: 124 ANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPSGSFDQFKHFIRLNFNICK 162
            N CCL  Y I+  LL+++EA L   I ++R WE+D P DP+G     + FI  N +ICK
Sbjct: 128 INGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICK 187

[Close]

BLAST of Moc02g06080 vs. ExPASy Swiss-Prot
Match: Q9SVU4 (Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-29
Identity = 59/125 (47.20%), Postives = 85/125 (68.00%), Query Frame = 0


Query: 48  DAPVPWFMYSFFGQGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFL 107
           D P PWF+Y F   G L+C++T +G IAAE  N CCL  Y I+  LL+++EA L   I +
Sbjct: 105 DLPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVI 164

Query: 108 NRDWEEDFPEDPSGSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYY 167
           +R WE+D P DP+G  +  + FI  N +ICKW+GI +V+IQ LSLLLA++L+A+ + R  
Sbjct: 165 DRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQS 224

Query: 168 DSDDD 173
           + DD+
Sbjct: 225 ELDDE 229

[Close]

BLAST of Moc02g06080 vs. ExPASy Swiss-Prot
Match: Q9C5W7 (Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-25
Identity = 70/235 (29.79%), Postives = 117/235 (49.79%), Query Frame = 0


Query: 3   RVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQR-------------QMGHLPFEGP-- 62
           R C++ LLK +N    + G  MI YG++L   ++R                ++ F  P  
Sbjct: 4   RGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRPIL 63

Query: 63  -----------DAPVPWFMYSFFGQGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLM 122
                      + P  WF+Y F G G  L VI+C G +   + + CCL  Y +++ LL++
Sbjct: 64  MAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLIL 123

Query: 123 VEAGLTTDIFLNRDWEEDFPEDPSGSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAM 182
           VE G    IF +  W ++ P D +G+FD   +F+R N+ I +W+ +  V  + L  LLA+
Sbjct: 124 VELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLAL 183

Query: 183 ILKAIGARRYYDSDDDY-APEKLPLIKNAALHSPATIVVGDPVFASKNNTWNKTD 211
           +++A      YDSDD+Y AP +   I+   ++  A  V G PV  + +   +++D
Sbjct: 184 MVRAANTPAEYDSDDEYLAPRQ--QIRQPFINRQAAPVTGVPVAPTLDQRPSRSD 236

[Close]

BLAST of Moc02g06080 vs. ExPASy TrEMBL
Match: A0A6J1CFW2 (tetraspanin-19 OS=Momordica charantia OX=3673 GN=LOC111011309 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.1e-119
Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG
Sbjct: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
           QGFLLCVITCLGHIAAETANRCCLHM +    LLLMVEAGLTTDIFLNRDWEEDFPEDPS
Sbjct: 61  QGFLLCVITCLGHIAAETANRCCLHMVLXXXXLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180
           GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL
Sbjct: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180

Query: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDKERN 217
           IKNAALHSPATIVVGDPVFASKNNTWNKTDDDKERN
Sbjct: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDKERN 216

[Close]

BLAST of Moc02g06080 vs. ExPASy TrEMBL
Match: A0A5D3C188 (Tetraspanin-19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001560 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 166/213 (77.93%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           +LR CMQSLLKFVNSGNGM+G AMILYG+WLMRAWQR +GHLP+EGP  P+PWFMYSF G
Sbjct: 4   ILRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPYEGPSDPIPWFMYSFLG 63

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
            G LLCVITCLGHIAAETAN CCLH+YM+++F+++MVEAG+TTD+FLNRDW EDFP+DPS
Sbjct: 64  LGILLCVITCLGHIAAETANGCCLHLYMLLLFMVIMVEAGVTTDVFLNRDWAEDFPKDPS 123

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180
           G FDQFKHFI+ NFNICKWIGI+ VSIQGLSLLLAM+LKAIG+RRYY+SDD+YAPE+LP 
Sbjct: 124 GCFDQFKHFIKSNFNICKWIGISTVSIQGLSLLLAMVLKAIGSRRYYESDDEYAPERLPF 183

Query: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDK 214
           +KN ALHSP T V+GDPVF SKN+TWNK  DD+
Sbjct: 184 LKN-ALHSPTTCVIGDPVFPSKNDTWNKRTDDE 215

[Close]

BLAST of Moc02g06080 vs. ExPASy TrEMBL
Match: A0A1S3BK78 (tetraspanin-19 OS=Cucumis melo OX=3656 GN=LOC103490521 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 166/213 (77.93%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           +LR CMQSLLKFVNSGNGM+G AMILYG+WLMRAWQR +GHLP+EGP  P+PWFMYSF G
Sbjct: 4   ILRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPYEGPSDPIPWFMYSFLG 63

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
            G LLCVITCLGHIAAETAN CCLH+YM+++F+++MVEAG+TTD+FLNRDW EDFP+DPS
Sbjct: 64  LGILLCVITCLGHIAAETANGCCLHLYMLLLFMVIMVEAGVTTDVFLNRDWAEDFPKDPS 123

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180
           G FDQFKHFI+ NFNICKWIGI+ VSIQGLSLLLAM+LKAIG+RRYY+SDD+YAPE+LP 
Sbjct: 124 GCFDQFKHFIKSNFNICKWIGISTVSIQGLSLLLAMVLKAIGSRRYYESDDEYAPERLPF 183

Query: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDK 214
           +KN ALHSP T V+GDPVF SKN+TWNK  DD+
Sbjct: 184 LKN-ALHSPTTCVIGDPVFPSKNDTWNKRTDDE 215

[Close]

BLAST of Moc02g06080 vs. ExPASy TrEMBL
Match: A0A6J1HZX7 (tetraspanin-19 OS=Cucurbita maxima OX=3661 GN=LOC111469621 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.9e-98
Identity = 167/213 (78.40%), Postives = 194/213 (91.08%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           M+R CMQSLLKFVNSGNG++G AMILYG+WLMRAWQR +GH PFE PD P+PWFMYSFFG
Sbjct: 4   MIRACMQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYSFFG 63

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
            G LLCVITC+GHIAAETA  CCLH+Y++++F++LMVEAGL TD+FLNRDWEEDFP DPS
Sbjct: 64  LGILLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPVDPS 123

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180
           GSFDQFK FIRLNF+IC+WIGI+M+SIQGLSLLLAM+LKAIG+RRYYDSDDDYAPE+LPL
Sbjct: 124 GSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPERLPL 183

Query: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDK 214
           +KN ALHSP+T V+GDPVF SKN+ WNK  DD+
Sbjct: 184 LKN-ALHSPSTCVIGDPVFPSKNDAWNKRTDDE 215

[Close]

BLAST of Moc02g06080 vs. ExPASy TrEMBL
Match: A0A6J1G704 (tetraspanin-19 OS=Cucurbita moschata OX=3662 GN=LOC111451441 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97
Identity = 166/213 (77.93%), Postives = 194/213 (91.08%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           M+R C+QSLLKFVNSGNG++G AMILYG+WLMRAWQR +GH PFE PD P+PWFMYSFFG
Sbjct: 4   MIRACIQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYSFFG 63

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
            G LLCVITC+GHIAAETA  CCLH+Y++++F++LMVEAGL TD+FLNRDWEEDFP DPS
Sbjct: 64  LGILLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPMDPS 123

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYYDSDDDYAPEKLPL 180
           GSFDQFK FIRLNF+IC+WIGI+M+SIQGLSLLLAM+LKAIG+RRYYDSDDDYAPE+LPL
Sbjct: 124 GSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPERLPL 183

Query: 181 IKNAALHSPATIVVGDPVFASKNNTWNKTDDDK 214
           +KN ALHSP+T V+GDPVF SKN+ WNK  DD+
Sbjct: 184 LKN-ALHSPSTCVIGDPVFPSKNDAWNKRTDDE 215

[Close]

BLAST of Moc02g06080 vs. TAIR 10
Match: AT2G20740.1 (Tetraspanin family protein )

HSP 1 Score: 260.4 bits (664), Expect = 1.3e-69
Identity = 121/208 (58.17%), Postives = 156/208 (75.00%), Query Frame = 0


Query: 1   MLRVCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGPDAPVPWFMYSFFG 60
           ++R C+QS+LK VNS  GM+G AMILY VWL+R WQ QMG+LPF   D PVPWF+YSF G
Sbjct: 4   IVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFADSDHPVPWFIYSFLG 63

Query: 61  QGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPS 120
            G +LCV+TC GHIAAET N CCL++YM  + LL MVE G+  DIFLNRDW++DFPEDPS
Sbjct: 64  LGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPS 123

Query: 121 GSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIG--ARRYYDSDDDYAPEKL 180
           G+F QF  FI  NF ICKWIG+++V +QGLS+L+AM+LKA+G    R+YDSDD+Y    +
Sbjct: 124 GAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTV 183

Query: 181 PLIKNAALHSPATIVVGDPVFASKNNTW 207
            L+++A    P   VVG+P++ +K   W
Sbjct: 184 ALLQDA--RQPPPYVVGEPMYGAKPGAW 209

[Close]

BLAST of Moc02g06080 vs. TAIR 10
Match: AT2G20740.2 (Tetraspanin family protein )

HSP 1 Score: 211.8 bits (538), Expect = 5.3e-55
Identity = 97/170 (57.06%), Postives = 126/170 (74.12%), Query Frame = 0


Query: 39  MGHLPFEGPDAPVPWFMYSFFGQGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVE 98
           MG+LPF   D PVPWF+YSF G G +LCV+TC GHIAAET N CCL++YM  + LL MVE
Sbjct: 1   MGNLPFADSDHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVE 60

Query: 99  AGLTTDIFLNRDWEEDFPEDPSGSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMIL 158
            G+  DIFLNRDW++DFPEDPSG+F QF  FI  NF ICKWIG+++V +QGLS+L+AM+L
Sbjct: 61  GGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLL 120

Query: 159 KAIG--ARRYYDSDDDYAPEKLPLIKNAALHSPATIVVGDPVFASKNNTW 207
           KA+G    R+YDSDD+Y    + L+++A    P   VVG+P++ +K   W
Sbjct: 121 KALGPHPHRHYDSDDEYNVSTVALLQDA--RQPPPYVVGEPMYGAKPGAW 168

[Close]

BLAST of Moc02g06080 vs. TAIR 10
Match: AT2G20740.3 (Tetraspanin family protein )

HSP 1 Score: 135.6 bits (340), Expect = 4.8e-32
Identity = 64/121 (52.89%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 88  MIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPSGSFDQFKHFIRLNFNICKWIGITMVSI 147
           M  + LL MVE G+  DIFLNRDW++DFPEDPSG+F QF  FI  NF ICKWIG+++V +
Sbjct: 1   MGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCV 60

Query: 148 QGLSLLLAMILKAIG--ARRYYDSDDDYAPEKLPLIKNAALHSPATIVVGDPVFASKNNT 207
           QGLS+L+AM+LKA+G    R+YDSDD+Y    + L+++A    P   VVG+P++ +K   
Sbjct: 61  QGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQDA--RQPPPYVVGEPMYGAKPGA 119

[Close]

BLAST of Moc02g06080 vs. TAIR 10
Match: AT2G20230.1 (Tetraspanin family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.4e-31
Identity = 71/203 (34.98%), Postives = 103/203 (50.74%), Query Frame = 0


Query: 4   VCMQSLLKFVNSGNGMMGFAMILYGVWLMRAWQRQMGHLPFEGP---------------- 63
           V   S LK +N     +G ++I+Y +W++  + R   HLP + P                
Sbjct: 8   VSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSR---HLPVDPPPSASSSSGTEIATSVS 67

Query: 64  -----------------------------DAPVPWFMYSFFGQGFLLCVITCLGHIAAET 123
                                        D P PWF+YSF   G L+C++T +G IAAE 
Sbjct: 68  EPLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEA 127

Query: 124 ANRCCLHMYMIIMFLLLMVEAGLTTDIFLNRDWEEDFPEDPSGSFDQFKHFIRLNFNICK 162
            N CCL  Y I+  LL+++EA L   I ++R WE+D P DP+G     + FI  N +ICK
Sbjct: 128 INGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICK 187

[Close]

BLAST of Moc02g06080 vs. TAIR 10
Match: AT4G28770.1 (Tetraspanin family protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-30
Identity = 59/125 (47.20%), Postives = 85/125 (68.00%), Query Frame = 0


Query: 48  DAPVPWFMYSFFGQGFLLCVITCLGHIAAETANRCCLHMYMIIMFLLLMVEAGLTTDIFL 107
           D P PWF+Y F   G L+C++T +G IAAE  N CCL  Y I+  LL+++EA L   I +
Sbjct: 105 DLPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVI 164

Query: 108 NRDWEEDFPEDPSGSFDQFKHFIRLNFNICKWIGITMVSIQGLSLLLAMILKAIGARRYY 167
           +R WE+D P DP+G  +  + FI  N +ICKW+GI +V+IQ LSLLLA++L+A+ + R  
Sbjct: 165 DRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQS 224

Query: 168 DSDDD 173
           + DD+
Sbjct: 225 ELDDE 229

The following BLAST results are available for this feature:

BLAST of Moc02g06080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140710.1	6.4e-119	97.22	tetraspanin-19 [Momordica charantia]	[more]
XP_038902884.1	2.5e-99	80.28	tetraspanin-19 isoform X1 [Benincasa hispida]	[more]
XP_038902885.1	2.5e-99	80.28	tetraspanin-19 isoform X2 [Benincasa hispida] >XP_038902886.1 tetraspanin-19 iso...	[more]
KAA0062078.1	2.8e-98	77.93	tetraspanin-19 [Cucumis melo var. makuwa] >TYK04942.1 tetraspanin-19 [Cucumis me...	[more]
XP_008448284.1	2.8e-98	77.93	PREDICTED: tetraspanin-19 [Cucumis melo]	[more]

BLAST of Moc02g06080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940P5	1.8e-68	58.17	Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1	[more]
Q93XY5	3.4e-30	34.98	Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1	[more]
Q9SVU4	1.7e-29	47.20	Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1	[more]
Q9C5W7	1.5e-25	29.79	Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A P...	[more]

BLAST of Moc02g06080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFW2	3.1e-119	97.22	tetraspanin-19 OS=Momordica charantia OX=3673 GN=LOC111011309 PE=4 SV=1	[more]
A0A5D3C188	1.3e-98	77.93	Tetraspanin-19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00156...	[more]
A0A1S3BK78	1.3e-98	77.93	tetraspanin-19 OS=Cucumis melo OX=3656 GN=LOC103490521 PE=4 SV=1	[more]
A0A6J1HZX7	3.9e-98	78.40	tetraspanin-19 OS=Cucurbita maxima OX=3661 GN=LOC111469621 PE=4 SV=1	[more]
A0A6J1G704	1.1e-97	77.93	tetraspanin-19 OS=Cucurbita moschata OX=3662 GN=LOC111451441 PE=4 SV=1	[more]

BLAST of Moc02g06080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20740.1	1.3e-69	58.17	Tetraspanin family protein	[more]
AT2G20740.2	5.3e-55	57.06	Tetraspanin family protein	[more]
AT2G20740.3	4.8e-32	52.89	Tetraspanin family protein	[more]
AT2G20230.1	2.4e-31	34.98	Tetraspanin family protein	[more]
AT4G28770.1	1.2e-30	47.20	Tetraspanin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 9..111 e-value: 1.0E-9 score: 38.4
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 1..188
None	No IPR available	PANTHER	PTHR19282:SF158	TETRASPANIN-19	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g06080.1	Moc02g06080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane