Moc02g04850 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc02g04850
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Locationchr2: 3596948 .. 3599676 (-)
RNA-Seq ExpressionMoc02g04850
SyntenyMoc02g04850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCACTTGGCGCTAGGTCTGTTTTCCGGTCATTTTCCGGTTCCGCACGCCGTGCTGCTGCTCATATCGGTTCTGAAGCCCGGGCGTCAAGCTCTCCCTTTCGCATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGCGTTGCTTAATGCTATTTTGTCCATTAAAAGTACGAAAATCCACCCCGAATCTATAGCGCTTTGAGCACGGTGTTCAAACCCAACTTCATTTCCCCCCTCAGTTTTTTCACGTTTTGATAAAGATGTTTCTATGTTTGGCTTGAAGGTGTGCAGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCGTTTCACTCTGCGTCGTCGTCAGCTTTGATGACTTCAATGCTCTCTATTTCGCGTAACAGCTGTGGTTGGCTTCCCGAAGGTGCGCTAATTGAAATTTTAATTCTCAGCTTTCTTGATGTGTCATGAGCTACGTCAGAAGAGGAAAGGAAAATATATTAAACTTGTGTAGTTTGGAATTTAGATCATATCTATAATTTCAGAAAGGGCTTCAGCTGTGGCTTTTATGGTTGATAATATTTGTTATGGACGTGTTTAGGTGCGCATATATATATCACTTTGATAATTTCATGGAGTTAGTTTTCTATTTGCATTAGTTCTTCGTTGGAAGAATTTCAGCTTAATAGTTTCGAACAGAAGCACCCTAGGAAAGGAGGTAGGTACTTAGCCCACTATGCCAAGATACAATAATAGTTTTTCTCGAGAAAGAGAGTTGTAGTTTGAGTGGGAATAATGATCAACTATATTTAGAAATTGTGATGTGTATATAAAGGTTTAGCAGTTAGGTTACAATATCCCCATTAGCCACATTAATCGGATGTTTCTGCCTATTAACCACCAAGAGGTATACCAAAAAAGATTTCTTTTGGGTTAAATTTAGCTATGATGTCAAGTAATTTGTTAATATCTTCATGAGGTTTTTTCTTATTAATGAGTATATCTGGTTTCTCCACTTCATATACAACTTATCATCGATTCATCATAGAGATTCTTGATCCAACTCTGTAATTTTCTTGATTCTTTTTTTTGAAAGGAGAAGTGGATCTGCTTCTAGGTTGTCTAACTAGTGGATTTTTTACTCTTGAATTAGGTAGCTAGCACACTTTATAGGCCCATTGATGTTCCTATTGCCTTCTTATTGCTCTGGTGAGTTGGTGCCTATAATCTTGTATAGGACTGATAAAATTGAACGGAATTATATAATAACATGCATACACAAGAACTTGATATTTTTCCCCCAATAGACAGTTTATTACATCAAGTAACTAATCTTCAAATTAGAATGCAAACAGGCTTAACAGACACTAATGTTTTGTTCTCTCTTTAGTCTTTCCTCCACCTCCCATGACCCGTACATGGGTCAGACTTAAGGTTCTTTTGGTGAAGTCGGGTGTTATAAACCTTCCCTTCATTGTTTGTTATGCTTGCTAGAATGAGTCATTTATGAGAAAAATTTTCATTTTATATTCAGATTGTTAATAAAAAAGTACATTCCCCTCTTTTCAATGTAGGCAAAGACAAGACTAGATGAGGATCAAGAAGCAGGAAGGAATGACTTGAGTTGTTTTGAGTTTCACCTTTTAAGTACCTAGTAGGCGATGCAATATACCCCAGCCCCACCCCCAAGACCAAAAAAAAAAAACTACTAGGTGATGATATCATCAGTAGGTTAGATGAGATGATTGTATTTGGAATGAAATAATAAACTATGATATTCAATTTGGTTCTTTGTGTTTGTAGATTGTTGTCTTAAGTGTTAAAGGATTACATACTCAATTTAATTCTGCAATTATTTTGGGTTACAGATTAGTAGATCGTTGCAGAATAAACTTTGCTTCTAGATTGTTTTCCATTTTCTGTTTTGCAAAATTTATTTGGTTTTAGAAGTGTTTGGTACTGTTGATTTGTTATCTTCCCATTTCATCTTCATAAAGTAGGTGGTTGCATTTGTTTTTACATTGTAACTCAACAATATATCAATATACTATGACTATCAAGTATCTTGCAAAGGAAAAATAATCATATAAACAGATCCGGTGAGTTAGGCTAAAACATGAATCAGTTGTTTGGTTAAAAAGGAGTTATCCTGTTTACCAATATATATATATATATATATTTTTATAAGAACCTATTTACCAATCTTGAGCTCTTGAAGCGAGAAATAGTTTTTGACGTCACCAAGCAGGAGTTTTCACTTTTAATTGAAAACATCTAATTTTTCTTTTTCCAATTTAATTGAAGGATGACTGATGAAAAACTAAAGAGTCTTATCTTAACTTTCTGAATGATACTCCGAAATGTCCAGTGGGAAAATTGCTTCTATTCTAACTAAAATGTATGCTGTAGTTTCCGTGACACGAGAATTAGGTCCAAACTTCCCACCTTTTAAGTTTAGACTAGGAAAATTTCAATCTACATCTCTTTGATGTGCATACTGATCAGCTCCCAGATTGTTTCTTGATTTGCCTAAGATCATATTTACAGTAATAACATACTGATAACCTGTGTTCATCAGCATGCAATGATGATCTGTGATTAATGACAAAAGGAATCGAGGAAGTTCTCTATGCAACTCACCATACGGACAGTGACTTCTATTATTTCTTAGAAGCTTCCAAGCTCCAATTGGTGGCTAGTGAAGAGTTGAGCTTCCAAACCAATGGCAATGGTTGA

mRNA sequence

ATGGCCTCACTTGGCGCTAGGTCTGTTTTCCGGTCATTTTCCGGTTCCGCACGCCGTGCTGCTGCTCATATCGGTTCTGAAGCCCGGGCGTCAAGCTCTCCCTTTCGCATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCAGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCGTTTCACTCTGCGTCGTCGTCAGCTTTGATGACTTCAATGCTCTCTATTTCGCGTAACAGCTGTGGTTGGCTTCCCGAAGGAATCGAGGAAGTTCTCTATGCAACTCACCATACGGACAGTGACTTCTATTATTTCTTAGAAGCTTCCAAGCTCCAATTGGTGGCTAGTGAAGAGTTGAGCTTCCAAACCAATGGCAATGGTTGA

Coding sequence (CDS)

ATGGCCTCACTTGGCGCTAGGTCTGTTTTCCGGTCATTTTCCGGTTCCGCACGCCGTGCTGCTGCTCATATCGGTTCTGAAGCCCGGGCGTCAAGCTCTCCCTTTCGCATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCAGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCGTTTCACTCTGCGTCGTCGTCAGCTTTGATGACTTCAATGCTCTCTATTTCGCGTAACAGCTGTGGTTGGCTTCCCGAAGGAATCGAGGAAGTTCTCTATGCAACTCACCATACGGACAGTGACTTCTATTATTTCTTAGAAGCTTCCAAGCTCCAATTGGTGGCTAGTGAAGAGTTGAGCTTCCAAACCAATGGCAATGGTTGA

Protein sequence

MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEGIEEVLYATHHTDSDFYYFLEASKLQLVASEELSFQTNGNG
Homology
[Close]
BLAST of Moc02g04850 vs. NCBI nr
Match: XP_022140728.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Momordica charantia])

HSP 1 Score: 171.0 bits (432), Expect = 6.7e-39
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60
          MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES
Sbjct: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60

Query: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEG 91
          MMPFHSASSSALMTSMLSISRNSCGWLPEG
Sbjct: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEG 90

[Close]
BLAST of Moc02g04850 vs. NCBI nr
Match: XP_022140726.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 171.0 bits (432), Expect = 6.7e-39
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60
          MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES
Sbjct: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60

Query: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEG 91
          MMPFHSASSSALMTSMLSISRNSCGWLPEG
Sbjct: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEG 90

[Close]
BLAST of Moc02g04850 vs. NCBI nr
Match: XP_022140727.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Momordica charantia])

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60
          MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES
Sbjct: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60

Query: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEGIEEVL 96
          MMPFHSASSSALMTSMLSISRNSCGWLPE   + L
Sbjct: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEACNDDL 95

[Close]
BLAST of Moc02g04850 vs. NCBI nr
Match: XP_023534316.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 155.6 bits (392), Expect = 2.9e-34
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 0 

Query: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASS-SPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MAS+GARSVFRS SGSARRAAAHIGS+AR+SS SPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSISRNSCGWLPEGIEE 94
          S+MPFHSASS+ALM SMLSISR SCGWLPEG +E
Sbjct: 61 SIMPFHSASSAALMISMLSISRRSCGWLPEGKDE 94

[Close]
BLAST of Moc02g04850 vs. NCBI nr
Match: XP_022971141.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 154.8 bits (390), Expect = 5.0e-34
Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 0 

Query: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASS-SPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MAS+GARSVFRSFSGSARRAAAHIGS+AR+SS SPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSISRNSCGWLPEG 91
          S+MPFHSASS+A+M SMLSISR SCGWLPEG
Sbjct: 61 SIMPFHSASSAAVMISMLSISRRSCGWLPEG 91

[Close]
BLAST of Moc02g04850 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 0 

Query: 5  GARSVFRSFSGSARRAAAHIG---SEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESM 64
          GARS+ R  + S+R AAA  G   S+A+++   FR    +       R   E+SFC+ES+
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESL 68

Query: 65 MPFHSASSSALMTSMLSISRNSCGWLPEGIEE 94
          +P+HSA++SALMTS LSIS  + GWL +   +
Sbjct: 69 LPYHSATASALMTSKLSISGQTYGWLSDACND 98

[Close]
BLAST of Moc02g04850 vs. ExPASy TrEMBL
Match: A0A6J1CIN8 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011321 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.2e-39
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60
          MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES
Sbjct: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60

Query: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEG 91
          MMPFHSASSSALMTSMLSISRNSCGWLPEG
Sbjct: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEG 90

[Close]
BLAST of Moc02g04850 vs. ExPASy TrEMBL
Match: A0A6J1CGX5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011321 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.2e-39
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60
          MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES
Sbjct: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60

Query: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEG 91
          MMPFHSASSSALMTSMLSISRNSCGWLPEG
Sbjct: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEG 90

[Close]
BLAST of Moc02g04850 vs. ExPASy TrEMBL
Match: A0A6J1CHV9 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011321 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.2e-39
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60
          MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES
Sbjct: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLES 60

Query: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEGIEEVL 96
          MMPFHSASSSALMTSMLSISRNSCGWLPE   + L
Sbjct: 61 MMPFHSASSSALMTSMLSISRNSCGWLPEACNDDL 95

[Close]
BLAST of Moc02g04850 vs. ExPASy TrEMBL
Match: A0A6J1I155 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469903 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.4e-34
Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 0 

Query: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASS-SPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MAS+GARSVFRSFSGSARRAAAHIGS+AR+SS SPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSISRNSCGWLPEG 91
          S+MPFHSASS+A+M SMLSISR SCGWLPEG
Sbjct: 61 SIMPFHSASSAAVMISMLSISRRSCGWLPEG 91

[Close]
BLAST of Moc02g04850 vs. ExPASy TrEMBL
Match: A0A6J1I2H5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469903 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.4e-34
Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 0 

Query: 1  MASLGARSVFRSFSGSARRAAAHIGSEARASS-SPFRMATNKPLSHRTFRCAAEMSFCLE 60
          MAS+GARSVFRSFSGSARRAAAHIGS+AR+SS SPFRMATNKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSISRNSCGWLPEG 91
          S+MPFHSASS+A+M SMLSISR SCGWLPEG
Sbjct: 61 SIMPFHSASSAAVMISMLSISRRSCGWLPEG 91

[Close]
BLAST of Moc02g04850 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11
Identity = 38/92 (41.30%), Postives = 60/92 (65.22%), Query Frame = 0 

Query: 6  ARSVFRSFSGSARRAAAHIGSEAR----ASSSPFRMATNKPLSHRTFRCAAEMSFCLESM 65
          ARSVFRS +  A   A    +  +    ++ + FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSSALMTSMLSISRNSCGWLPEGIEE 94
          +P+H+A++SAL+ SMLS+SR   GW+ +G++E
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDGLDE 93

[Close]
BLAST of Moc02g04850 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11
Identity = 38/92 (41.30%), Postives = 60/92 (65.22%), Query Frame = 0 

Query: 6  ARSVFRSFSGSARRAAAHIGSEAR----ASSSPFRMATNKPLSHRTFRCAAEMSFCLESM 65
          ARSVFRS +  A   A    +  +    ++ + FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSSALMTSMLSISRNSCGWLPEGIEE 94
          +P+H+A++SAL+ SMLS+SR   GW+ +G++E
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDGLDE 93

[Close]
BLAST of Moc02g04850 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11
Identity = 38/92 (41.30%), Postives = 60/92 (65.22%), Query Frame = 0 

Query: 6  ARSVFRSFSGSARRAAAHIGSEAR----ASSSPFRMATNKPLSHRTFRCAAEMSFCLESM 65
          ARSVFRS +  A   A    +  +    ++ + FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSSALMTSMLSISRNSCGWLPEGIEE 94
          +P+H+A++SAL+ SMLS+SR   GW+ +G++E
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDGLDE 93

[Close]
BLAST of Moc02g04850 vs. TAIR 10
Match: AT2G33847.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.4); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 4.1e-10
Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 0 

Query: 6  ARSVFRSFSGSARRAAAHIGSEARASS-SPFRMATNKPLSHRTFRCAAEMSFCLESMMPF 65
          ARSVFRS  G A  AA        +S+ S F++    PLSHR FR   E+S C+E+M+P+
Sbjct: 4  ARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETMLPY 63

Query: 66 HSASSSALMTSMLSISRNSCGWLPEGIEE 94
          H+A++SAL+ SMLS+S  S     + I++
Sbjct: 64 HTATASALLNSMLSVSGRSIWTFQDCIDD 92

[Close]
BLAST of Moc02g04850 vs. TAIR 10
Match: AT2G33847.2 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.3); Has 71 Blast hits to 71 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 5.3e-10
Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 0 

Query: 6  ARSVFRSFSGSARRAAAHIGSEARASS-SPFRMATNKPLSHRTFRCAAEMSFCLESMMPF 65
          ARSVFRS  G A  AA        +S+ S F++    PLSHR FR   E+S C+E+M+P+
Sbjct: 4  ARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETMLPY 63

Query: 66 HSASSSALMTSMLSISRNSCGWLPEG 91
          H+A++SAL+ SMLS+S  S  W  +G
Sbjct: 64 HTATASALLNSMLSVSGRSI-WTFQG 88

The following BLAST results are available for this feature:
BLAST of Moc02g04850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022140728.16.7e-39100.00protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ... [more]
XP_022140726.16.7e-39100.00protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
XP_022140727.11.5e-3894.74protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
XP_023534316.12.9e-3488.30protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
XP_022971141.15.0e-3490.11protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
BLAST of Moc02g04850 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93ZJ32.8e-0842.39Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
BLAST of Moc02g04850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CIN83.2e-39100.00protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ... [more]
A0A6J1CGX53.2e-39100.00protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
A0A6J1CHV97.2e-3994.74protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
A0A6J1I1552.4e-3490.11protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
A0A6J1I2H52.4e-3490.11protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
BLAST of Moc02g04850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G28395.22.2e-1141.30unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G28395.12.2e-1141.30unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G28395.32.2e-1141.30unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G33847.14.1e-1043.82unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... [more]
AT2G33847.25.3e-1046.51unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 4..90
IPR033251Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrialPANTHERPTHR33156:SF48PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIALcoord: 4..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc02g04850.1Moc02g04850.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000741 karyogamy