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Moc02g04850 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCACTTGGCGCTAGGTCTGTTTTCCGGTCATTTTCCGGTTCCGCACGCCGTGCTGCTGCTCATATCGGTTCTGAAGCCCGGGCGTCAAGCTCTCCCTTTCGCATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGCGTTGCTTAATGCTATTTTGTCCATTAAAAGTACGAAAATCCACCCCGAATCTATAGCGCTTTGAGCACGGTGTTCAAACCCAACTTCATTTCCCCCCTCAGTTTTTTCACGTTTTGATAAAGATGTTTCTATGTTTGGCTTGAAGGTGTGCAGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCGTTTCACTCTGCGTCGTCGTCAGCTTTGATGACTTCAATGCTCTCTATTTCGCGTAACAGCTGTGGTTGGCTTCCCGAAGGTGCGCTAATTGAAATTTTAATTCTCAGCTTTCTTGATGTGTCATGAGCTACGTCAGAAGAGGAAAGGAAAATATATTAAACTTGTGTAGTTTGGAATTTAGATCATATCTATAATTTCAGAAAGGGCTTCAGCTGTGGCTTTTATGGTTGATAATATTTGTTATGGACGTGTTTAGGTGCGCATATATATATCACTTTGATAATTTCATGGAGTTAGTTTTCTATTTGCATTAGTTCTTCGTTGGAAGAATTTCAGCTTAATAGTTTCGAACAGAAGCACCCTAGGAAAGGAGGTAGGTACTTAGCCCACTATGCCAAGATACAATAATAGTTTTTCTCGAGAAAGAGAGTTGTAGTTTGAGTGGGAATAATGATCAACTATATTTAGAAATTGTGATGTGTATATAAAGGTTTAGCAGTTAGGTTACAATATCCCCATTAGCCACATTAATCGGATGTTTCTGCCTATTAACCACCAAGAGGTATACCAAAAAAGATTTCTTTTGGGTTAAATTTAGCTATGATGTCAAGTAATTTGTTAATATCTTCATGAGGTTTTTTCTTATTAATGAGTATATCTGGTTTCTCCACTTCATATACAACTTATCATCGATTCATCATAGAGATTCTTGATCCAACTCTGTAATTTTCTTGATTCTTTTTTTTGAAAGGAGAAGTGGATCTGCTTCTAGGTTGTCTAACTAGTGGATTTTTTACTCTTGAATTAGGTAGCTAGCACACTTTATAGGCCCATTGATGTTCCTATTGCCTTCTTATTGCTCTGGTGAGTTGGTGCCTATAATCTTGTATAGGACTGATAAAATTGAACGGAATTATATAATAACATGCATACACAAGAACTTGATATTTTTCCCCCAATAGACAGTTTATTACATCAAGTAACTAATCTTCAAATTAGAATGCAAACAGGCTTAACAGACACTAATGTTTTGTTCTCTCTTTAGTCTTTCCTCCACCTCCCATGACCCGTACATGGGTCAGACTTAAGGTTCTTTTGGTGAAGTCGGGTGTTATAAACCTTCCCTTCATTGTTTGTTATGCTTGCTAGAATGAGTCATTTATGAGAAAAATTTTCATTTTATATTCAGATTGTTAATAAAAAAGTACATTCCCCTCTTTTCAATGTAGGCAAAGACAAGACTAGATGAGGATCAAGAAGCAGGAAGGAATGACTTGAGTTGTTTTGAGTTTCACCTTTTAAGTACCTAGTAGGCGATGCAATATACCCCAGCCCCACCCCCAAGACCAAAAAAAAAAAACTACTAGGTGATGATATCATCAGTAGGTTAGATGAGATGATTGTATTTGGAATGAAATAATAAACTATGATATTCAATTTGGTTCTTTGTGTTTGTAGATTGTTGTCTTAAGTGTTAAAGGATTACATACTCAATTTAATTCTGCAATTATTTTGGGTTACAGATTAGTAGATCGTTGCAGAATAAACTTTGCTTCTAGATTGTTTTCCATTTTCTGTTTTGCAAAATTTATTTGGTTTTAGAAGTGTTTGGTACTGTTGATTTGTTATCTTCCCATTTCATCTTCATAAAGTAGGTGGTTGCATTTGTTTTTACATTGTAACTCAACAATATATCAATATACTATGACTATCAAGTATCTTGCAAAGGAAAAATAATCATATAAACAGATCCGGTGAGTTAGGCTAAAACATGAATCAGTTGTTTGGTTAAAAAGGAGTTATCCTGTTTACCAATATATATATATATATATATTTTTATAAGAACCTATTTACCAATCTTGAGCTCTTGAAGCGAGAAATAGTTTTTGACGTCACCAAGCAGGAGTTTTCACTTTTAATTGAAAACATCTAATTTTTCTTTTTCCAATTTAATTGAAGGATGACTGATGAAAAACTAAAGAGTCTTATCTTAACTTTCTGAATGATACTCCGAAATGTCCAGTGGGAAAATTGCTTCTATTCTAACTAAAATGTATGCTGTAGTTTCCGTGACACGAGAATTAGGTCCAAACTTCCCACCTTTTAAGTTTAGACTAGGAAAATTTCAATCTACATCTCTTTGATGTGCATACTGATCAGCTCCCAGATTGTTTCTTGATTTGCCTAAGATCATATTTACAGTAATAACATACTGATAACCTGTGTTCATCAGCATGCAATGATGATCTGTGATTAATGACAAAAGGAATCGAGGAAGTTCTCTATGCAACTCACCATACGGACAGTGACTTCTATTATTTCTTAGAAGCTTCCAAGCTCCAATTGGTGGCTAGTGAAGAGTTGAGCTTCCAAACCAATGGCAATGGTTGA ATGGCCTCACTTGGCGCTAGGTCTGTTTTCCGGTCATTTTCCGGTTCCGCACGCCGTGCTGCTGCTCATATCGGTTCTGAAGCCCGGGCGTCAAGCTCTCCCTTTCGCATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCAGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCGTTTCACTCTGCGTCGTCGTCAGCTTTGATGACTTCAATGCTCTCTATTTCGCGTAACAGCTGTGGTTGGCTTCCCGAAGGAATCGAGGAAGTTCTCTATGCAACTCACCATACGGACAGTGACTTCTATTATTTCTTAGAAGCTTCCAAGCTCCAATTGGTGGCTAGTGAAGAGTTGAGCTTCCAAACCAATGGCAATGGTTGA ATGGCCTCACTTGGCGCTAGGTCTGTTTTCCGGTCATTTTCCGGTTCCGCACGCCGTGCTGCTGCTCATATCGGTTCTGAAGCCCGGGCGTCAAGCTCTCCCTTTCGCATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCAGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCGTTTCACTCTGCGTCGTCGTCAGCTTTGATGACTTCAATGCTCTCTATTTCGCGTAACAGCTGTGGTTGGCTTCCCGAAGGAATCGAGGAAGTTCTCTATGCAACTCACCATACGGACAGTGACTTCTATTATTTCTTAGAAGCTTCCAAGCTCCAATTGGTGGCTAGTGAAGAGTTGAGCTTCCAAACCAATGGCAATGGTTGA MASLGARSVFRSFSGSARRAAAHIGSEARASSSPFRMATNKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSISRNSCGWLPEGIEEVLYATHHTDSDFYYFLEASKLQLVASEELSFQTNGNG Homology
BLAST of Moc02g04850 vs. NCBI nr
Match: XP_022140728.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Momordica charantia]) HSP 1 Score: 171.0 bits (432), Expect = 6.7e-39 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Moc02g04850 vs. NCBI nr
Match: XP_022140726.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia]) HSP 1 Score: 171.0 bits (432), Expect = 6.7e-39 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Moc02g04850 vs. NCBI nr
Match: XP_022140727.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Momordica charantia]) HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38 Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 0
BLAST of Moc02g04850 vs. NCBI nr
Match: XP_023534316.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 155.6 bits (392), Expect = 2.9e-34 Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 0
BLAST of Moc02g04850 vs. NCBI nr
Match: XP_022971141.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 154.8 bits (390), Expect = 5.0e-34 Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 0
BLAST of Moc02g04850 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08 Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 0
BLAST of Moc02g04850 vs. ExPASy TrEMBL
Match: A0A6J1CIN8 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011321 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 3.2e-39 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Moc02g04850 vs. ExPASy TrEMBL
Match: A0A6J1CGX5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011321 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 3.2e-39 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Moc02g04850 vs. ExPASy TrEMBL
Match: A0A6J1CHV9 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011321 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 7.2e-39 Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 0
BLAST of Moc02g04850 vs. ExPASy TrEMBL
Match: A0A6J1I155 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469903 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.4e-34 Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 0
BLAST of Moc02g04850 vs. ExPASy TrEMBL
Match: A0A6J1I2H5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469903 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.4e-34 Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 0
BLAST of Moc02g04850 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11 Identity = 38/92 (41.30%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Moc02g04850 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11 Identity = 38/92 (41.30%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Moc02g04850 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11 Identity = 38/92 (41.30%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Moc02g04850 vs. TAIR 10
Match: AT2G33847.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.4); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 4.1e-10 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Moc02g04850 vs. TAIR 10
Match: AT2G33847.2 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.3); Has 71 Blast hits to 71 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 5.3e-10 Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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