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Moc02g04340 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAGGGCTCATTTTTCTCCACTCGCTTATGCGATTGCCCCTCATTTTCGTCTACGATCTCGTATGTATCCCGCTGTTTCACCTCAAGCAAGCCATTCTCAGCCTTGCTACCGTTTTCCGGTTCTCTTCTCCGCCCGGGAGAAGATACGAAGAGCTACGACGGAGGAACGACGGTACAGCGGAGGACGAGGTCATGTGCTCCATCTGTTTGACGGAATTCGCGAGACAAGATTCCGTGTACGAACTTCCCGATTGTGCGCACGTCTTCCATATCAATTGCATCGAGAAGTGGATGGAGAGGAACAACTTCACCTGCCCGCTCTGTAGGTGCTTCTTCAACATCGAGAATCGCCCTGAGAAACTCCGCTTTGTCATTCCAGATAATCCTTCTTGCCTCTATTATTTCTTGCAGTGA ATGTTAGGGCTCATTTTTCTCCACTCGCTTATGCGATTGCCCCTCATTTTCGTCTACGATCTCGTATGTATCCCGCTGTTTCACCTCAAGCAAGCCATTCTCAGCCTTGCTACCGTTTTCCGGTTCTCTTCTCCGCCCGGGAGAAGATACGAAGAGCTACGACGGAGGAACGACGGTACAGCGGAGGACGAGGTCATGTGCTCCATCTGTTTGACGGAATTCGCGAGACAAGATTCCGTGTACGAACTTCCCGATTGTGCGCACGTCTTCCATATCAATTGCATCGAGAAGTGGATGGAGAGGAACAACTTCACCTGCCCGCTCTGTAGGTGCTTCTTCAACATCGAGAATCGCCCTGAGAAACTCCGCTTTGTCATTCCAGATAATCCTTCTTGCCTCTATTATTTCTTGCAGTGA ATGTTAGGGCTCATTTTTCTCCACTCGCTTATGCGATTGCCCCTCATTTTCGTCTACGATCTCGTATGTATCCCGCTGTTTCACCTCAAGCAAGCCATTCTCAGCCTTGCTACCGTTTTCCGGTTCTCTTCTCCGCCCGGGAGAAGATACGAAGAGCTACGACGGAGGAACGACGGTACAGCGGAGGACGAGGTCATGTGCTCCATCTGTTTGACGGAATTCGCGAGACAAGATTCCGTGTACGAACTTCCCGATTGTGCGCACGTCTTCCATATCAATTGCATCGAGAAGTGGATGGAGAGGAACAACTTCACCTGCCCGCTCTGTAGGTGCTTCTTCAACATCGAGAATCGCCCTGAGAAACTCCGCTTTGTCATTCCAGATAATCCTTCTTGCCTCTATTATTTCTTGCAGTGA MLGLIFLHSLMRLPLIFVYDLVCIPLFHLKQAILSLATVFRFSSPPGRRYEELRRRNDGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCRCFFNIENRPEKLRFVIPDNPSCLYYFLQ Homology
BLAST of Moc02g04340 vs. NCBI nr
Match: XP_022140627.1 (RING-H2 finger protein ATL64 [Momordica charantia]) HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of Moc02g04340 vs. NCBI nr
Match: KAG7010790.1 (RING-H2 finger protein ATL18, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188.3 bits (477), Expect = 4.3e-44 Identity = 98/150 (65.33%), Postives = 113/150 (75.33%), Query Frame = 0
BLAST of Moc02g04340 vs. NCBI nr
Match: XP_023512248.1 (RING-H2 finger protein ATL18-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 188.0 bits (476), Expect = 5.6e-44 Identity = 98/150 (65.33%), Postives = 113/150 (75.33%), Query Frame = 0
BLAST of Moc02g04340 vs. NCBI nr
Match: XP_022944066.1 (RING-H2 finger protein ATL18-like [Cucurbita moschata] >KAG6570951.1 RING-H2 finger protein ATL18, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 186.4 bits (472), Expect = 1.6e-43 Identity = 98/150 (65.33%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of Moc02g04340 vs. NCBI nr
Match: XP_038902378.1 (probable E3 ubiquitin-protein ligase RHA4A [Benincasa hispida]) HSP 1 Score: 171.0 bits (432), Expect = 7.1e-39 Identity = 91/155 (58.71%), Postives = 108/155 (69.68%), Query Frame = 0
BLAST of Moc02g04340 vs. ExPASy Swiss-Prot
Match: Q9SZL4 (RING-H2 finger protein ATL18 OS=Arabidopsis thaliana OX=3702 GN=ATL18 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13 Identity = 44/118 (37.29%), Postives = 60/118 (50.85%), Query Frame = 0
BLAST of Moc02g04340 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.8e-11 Identity = 34/90 (37.78%), Postives = 53/90 (58.89%), Query Frame = 0
BLAST of Moc02g04340 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.5e-10 Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0
BLAST of Moc02g04340 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.2e-10 Identity = 30/87 (34.48%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of Moc02g04340 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.2e-10 Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 0
BLAST of Moc02g04340 vs. ExPASy TrEMBL
Match: A0A6J1CHK3 (RING-H2 finger protein ATL64 OS=Momordica charantia OX=3673 GN=LOC111011236 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 5.8e-71 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of Moc02g04340 vs. ExPASy TrEMBL
Match: A0A6J1FTE6 (RING-H2 finger protein ATL18-like OS=Cucurbita moschata OX=3662 GN=LOC111448616 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 7.9e-44 Identity = 98/150 (65.33%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of Moc02g04340 vs. ExPASy TrEMBL
Match: A0A6J1G855 (E3 ubiquitin-protein ligase ATL41-like OS=Cucurbita moschata OX=3662 GN=LOC111451622 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 1.1e-34 Identity = 84/140 (60.00%), Postives = 97/140 (69.29%), Query Frame = 0
BLAST of Moc02g04340 vs. ExPASy TrEMBL
Match: A0A6J1I5X8 (RING-H2 finger protein ATL18 OS=Cucurbita maxima OX=3661 GN=LOC111469894 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 5.7e-34 Identity = 84/137 (61.31%), Postives = 95/137 (69.34%), Query Frame = 0
BLAST of Moc02g04340 vs. ExPASy TrEMBL
Match: A0A5A7TXY0 (RING-H2 finger protein ATL18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00410 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.5e-31 Identity = 79/150 (52.67%), Postives = 98/150 (65.33%), Query Frame = 0
BLAST of Moc02g04340 vs. TAIR 10
Match: AT4G38140.1 (RING/U-box superfamily protein ) HSP 1 Score: 77.8 bits (190), Expect = 7.6e-15 Identity = 44/118 (37.29%), Postives = 60/118 (50.85%), Query Frame = 0
BLAST of Moc02g04340 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 2.7e-12 Identity = 34/90 (37.78%), Postives = 53/90 (58.89%), Query Frame = 0
BLAST of Moc02g04340 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein ) HSP 1 Score: 66.6 bits (161), Expect = 1.8e-11 Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0
BLAST of Moc02g04340 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein ) HSP 1 Score: 66.2 bits (160), Expect = 2.3e-11 Identity = 30/87 (34.48%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of Moc02g04340 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 3.0e-11 Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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