Moc02g04090 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTGATGGTTGTTTTTCTTTGTAGTTTTGTGGCAGCAGAAAGGGAAACAAATGATTTTGCACACATAGATGACATCTTGGTTCGCTTGAGAAAGGTCTGTGGCTTCCCATACTCTGTAATATGAATTTACCACTGCTTTAGATGATCCGGTCGAAGTCTTGTCTTAACATTTTAAGGTATATTTGTCAGGTGTTCAACTTATCATTTGATATTTTTTGCCTTCGAGTTCCCATATTTATTATAATGGATGAGGAATTTGTTTTAATTTATTAATTTTATTTTAGTGATTTTAGCTTTTTATACTACACGTCTAAAGGTATCAAAAGCTGATCTAATGAATTTTTTTTTTTTACTCCATTTTCCTCAAAATGTTATAGGCAGTCAATCATCCATATCTTGTGGTGTACTCTAAAACTTCTGCCATAAATTGTGGAAGCTCTACTGATAATAGTAATGAACAACTATGTGGAATTTGTCATATAGCAGCAGAAAATCTTGTGGTGAGTTTCTTTTTTTCCTTTTGACAAGAATCCTCTGGGGAATTCTCCTGCATTGACTATTGCGTTTCCAATTGTCCATCTTTTTTAATATTGATATTAGCTAATGTCATCTGATTCTCATTGAACTGCTATAGTGCACATCTATTTCTGGTTACTCATGAGTATGACCGACGTTGACAGTCTTGTCTGTCATAGCAGTGAAATTTTGTGAGAACGCTGCTAATGAACATCTTGTATTTTATCACTATTTACTAAACTGAACTTGTACTTGTAATGACTAATGTCATTTAATTTCTAAAGTAAATTAGTTAGAATAAATACCTCAATTGTACTTGAAATAACCAATATTATCCCAGGACTGTTGCTTTAGTTCATTTAATGAATGCACATCTTCTTTAAAAGTAATTTACTGCCTTTTTCACTTCATTACATCTTTAGTTGAAATTGACGTGACCCAGTAATTTACTGCCTCAGCTTGAAACAAACAATGTTTTCAGCATTCTTTTGATATTCTCGGACTAATGAAAACTATTTTTAGAACTGGGATATGGAAAAACACAGAATTTACTATTTCAGATAATACACAGGAACAGACAAGCGAAAATCAGAAAAAAGAGGCGGACATAAGAGAAAAGCAGAAAAAAGAGGAAGAAACACGTATAGAAATAGCAGAAGCCTGGGATAGCATTCTATTTGCTCAAGTAATAAGAGGTTTTTTGTTAGTAACCCAACCAATTGTTAGAAAATGTATTGTCTTACCCTCATGGATAATAGCTAAAAATATTACCCGGTGCAATCTTTTTTATCCTTTCCTTTACTCTATCAGGTTACCTCGTGTGAGCATACATTTTGTAAGGCGTGCATGATTGATTATTACACTGATAATTTCCTGTTTGCTCAAAGATGCTCGCGGTTGAATTTAGCACAACTCTGACTGCTGGGGACGAAACCATCAAAACAAGAGTTGAGGGGTTTAAATCTTCAAGTATACTTAACAGAATACCGCTGGAGAATTTTCTTACAAGCACAAAAATAGAAGCTTTGGTACGTTTAATTCAGGCTCCCTTGTATTTGTTTAATCTTTGGATGTGAATGAAGACAACATGTGGCCAAATCAATTCACAATTGGAACTCAATCTATTACTGAAGCAGATTTGATAATCATGACCTCGTTATTTAATTTTTTTCTCTTTCCCTTCCTACTTCAGAGAGAAGAAATTATATTGATGTTTGAACGAGATGGATCTGCAAAAGGAATAGTTCTCAGCCAATTCACTTCGTTTTCAGATCTCATTAACTATTCCTTAACAAAGGTATGTATAAGTTCACATTTAGAGTTCTGATTTCTCATAAAACAAGTGACTGTATGTTGTGCAACAAACTCTTTGCAGTCCGGCATTTCCTGTGTTCAATTAACAGGAAGCATAAACTTGGCTCAAGGAGGTGATGCCATGGAGAGGTTTGTTCACGATCCATATTGCAGGATTTTATTGATCAACTTGAACGCTGGAGGAGTTGCTCATAATCTTACCGTCGCATCGCATGTAAGAAATTCTTTTTATGTTGCATTATATGCAGTTATTGCAACTGTTTATGCATGTGTAGTGCAGTTATTTAGCAAGTGTATAAATATATTTTCGTTCTTCAAATTAATGGTTTGTTTTTGGTGGTTCGACACACTGTTATATACTTCATTGATCTTCAATTTCAGGTCTTTATCATGGACCCTTGGTGGAATCCAGCAGTGGAACGGCAAGCCCTAGACAGAGTCCGTCAAATTGGAGCATACAAACCTATCAGGTGTGGTAGTTTGATAAAACAAGAATTGGCATTTTCCTACTATTTCTTGAAAAGAAGTCCCATATACAAACTTCTGTTGGGGATCCACAGAGAATAAGATCCAGAAAATGATGGTTCATTTTTCGAGAATCACATAGTACCAGACTAATCTTGTTTGCCTGATTGCATCAGGGACAAGGTCTAGTGAAGAAACTAACTTGGCATTTTTGACAAGAGCAGATATGCATAAATCTGTCAAAGAGGGAGGACGCAATGACTTGGAGCGGCTACAACACTTATTCTCCTCCTCGGAAGACATTGTAAGTGGTATACCTTTCATTCAATTGCTAGCAATCGTCATGGCAGTGGAGAAAGGCTTCGGCCAATCTTCAATATTGTCATCAGTTTTAGCAGCCCCCTAA ATGTCTTTGATGGTTGTTTTTCTTTGTAGTTTTGTGGCAGCAGAAAGGGAAACAAATGATTTTGCACACATAGATGACATCTTGGTTCGCTTGAGAAAGGCAGTCAATCATCCATATCTTGTGGTGTACTCTAAAACTTCTGCCATAAATTGTGGAAGCTCTACTGATAATAGTAATGAACAACTATGTGGAATTTGTCATATAGCAGCAGAAAATCTTGTGATGCTCGCGGTTGAATTTAGCACAACTCTGACTGCTGGGGACGAAACCATCAAAACAAGAGTTGAGGGGTTTAAATCTTCAAGTATACTTAACAGAATACCGCTGGAGAATTTTCTTACAAGCACAAAAATAGAAGCTTTGAGAGAAGAAATTATATTGATGTTTGAACGAGATGGATCTGCAAAAGGAATAGTTCTCAGCCAATTCACTTCGTTTTCAGATCTCATTAACTATTCCTTAACAAAGTCCGGCATTTCCTGTGTTCAATTAACAGGAAGCATAAACTTGGCTCAAGGAGGTGATGCCATGGAGAGGTTTGTTCACGATCCATATTGCAGGATTTTATTGATCAACTTGAACGCTGGAGGAGTTGCTCATAATCTTACCGTCGCATCGCATGTCTTTATCATGGACCCTTGGTGGAATCCAGCAGTGGAACGGCAAGCCCTAGACAGAGTCCGTCAAATTGGAGCATACAAACCTATCAGGTGTGGGACAAGGTCTAGTGAAGAAACTAACTTGGCATTTTTGACAAGAGCAGATATGCATAAATCTGTCAAAGAGGGAGGACGCAATGACTTGGAGCGGCTACAACACTTATTCTCCTCCTCGGAAGACATTGTAAGTGGTATACCTTTCATTCAATTGCTAGCAATCGTCATGGCAGTGGAGAAAGGCTTCGGCCAATCTTCAATATTGTCATCAGTTTTAGCAGCCCCCTAA ATGTCTTTGATGGTTGTTTTTCTTTGTAGTTTTGTGGCAGCAGAAAGGGAAACAAATGATTTTGCACACATAGATGACATCTTGGTTCGCTTGAGAAAGGCAGTCAATCATCCATATCTTGTGGTGTACTCTAAAACTTCTGCCATAAATTGTGGAAGCTCTACTGATAATAGTAATGAACAACTATGTGGAATTTGTCATATAGCAGCAGAAAATCTTGTGATGCTCGCGGTTGAATTTAGCACAACTCTGACTGCTGGGGACGAAACCATCAAAACAAGAGTTGAGGGGTTTAAATCTTCAAGTATACTTAACAGAATACCGCTGGAGAATTTTCTTACAAGCACAAAAATAGAAGCTTTGAGAGAAGAAATTATATTGATGTTTGAACGAGATGGATCTGCAAAAGGAATAGTTCTCAGCCAATTCACTTCGTTTTCAGATCTCATTAACTATTCCTTAACAAAGTCCGGCATTTCCTGTGTTCAATTAACAGGAAGCATAAACTTGGCTCAAGGAGGTGATGCCATGGAGAGGTTTGTTCACGATCCATATTGCAGGATTTTATTGATCAACTTGAACGCTGGAGGAGTTGCTCATAATCTTACCGTCGCATCGCATGTCTTTATCATGGACCCTTGGTGGAATCCAGCAGTGGAACGGCAAGCCCTAGACAGAGTCCGTCAAATTGGAGCATACAAACCTATCAGGTGTGGGACAAGGTCTAGTGAAGAAACTAACTTGGCATTTTTGACAAGAGCAGATATGCATAAATCTGTCAAAGAGGGAGGACGCAATGACTTGGAGCGGCTACAACACTTATTCTCCTCCTCGGAAGACATTGTAAGTGGTATACCTTTCATTCAATTGCTAGCAATCGTCATGGCAGTGGAGAAAGGCTTCGGCCAATCTTCAATATTGTCATCAGTTTTAGCAGCCCCCTAA MSLMVVFLCSFVAAERETNDFAHIDDILVRLRKAVNHPYLVVYSKTSAINCGSSTDNSNEQLCGICHIAAENLVMLAVEFSTTLTAGDETIKTRVEGFKSSSILNRIPLENFLTSTKIEALREEIILMFERDGSAKGIVLSQFTSFSDLINYSLTKSGISCVQLTGSINLAQGGDAMERFVHDPYCRILLINLNAGGVAHNLTVASHVFIMDPWWNPAVERQALDRVRQIGAYKPIRCGTRSSEETNLAFLTRADMHKSVKEGGRNDLERLQHLFSSSEDIVSGIPFIQLLAIVMAVEKGFGQSSILSSVLAAP Homology
BLAST of Moc02g04090 vs. NCBI nr
Match: XP_022140340.1 (DNA repair protein RAD16 [Momordica charantia]) HSP 1 Score: 337.0 bits (863), Expect = 1.7e-88 Identity = 186/307 (60.59%), Postives = 215/307 (70.03%), Query Frame = 0
BLAST of Moc02g04090 vs. NCBI nr
Match: XP_038902046.1 (ATP-dependent helicase rhp16 [Benincasa hispida]) HSP 1 Score: 316.6 bits (810), Expect = 2.4e-82 Identity = 171/294 (58.16%), Postives = 204/294 (69.39%), Query Frame = 0
BLAST of Moc02g04090 vs. NCBI nr
Match: KAG6570890.1 (hypothetical protein SDJN03_29805, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 311.2 bits (796), Expect = 1.0e-80 Identity = 162/261 (62.07%), Postives = 189/261 (72.41%), Query Frame = 0
BLAST of Moc02g04090 vs. NCBI nr
Match: XP_023512492.1 (DNA repair protein RAD16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512493.1 DNA repair protein RAD16 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 311.2 bits (796), Expect = 1.0e-80 Identity = 162/261 (62.07%), Postives = 189/261 (72.41%), Query Frame = 0
BLAST of Moc02g04090 vs. NCBI nr
Match: KAG7010739.1 (RAD16, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 310.1 bits (793), Expect = 2.2e-80 Identity = 161/261 (61.69%), Postives = 189/261 (72.41%), Query Frame = 0
BLAST of Moc02g04090 vs. ExPASy Swiss-Prot
Match: P79051 (ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rhp16 PE=3 SV=2) HSP 1 Score: 157.9 bits (398), Expect = 1.9e-37 Identity = 102/297 (34.34%), Postives = 158/297 (53.20%), Query Frame = 0
BLAST of Moc02g04090 vs. ExPASy Swiss-Prot
Match: P31244 (DNA repair protein RAD16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RAD16 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 6.2e-33 Identity = 84/252 (33.33%), Postives = 136/252 (53.97%), Query Frame = 0
BLAST of Moc02g04090 vs. ExPASy Swiss-Prot
Match: P0CQ67 (DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=RAD5 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 9.5e-26 Identity = 60/129 (46.51%), Postives = 89/129 (68.99%), Query Frame = 0
BLAST of Moc02g04090 vs. ExPASy Swiss-Prot
Match: P0CQ66 (DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=RAD5 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 9.5e-26 Identity = 60/129 (46.51%), Postives = 89/129 (68.99%), Query Frame = 0
BLAST of Moc02g04090 vs. ExPASy Swiss-Prot
Match: Q9FNI6 (DNA repair protein RAD5A OS=Arabidopsis thaliana OX=3702 GN=RAD5A PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 7.6e-23 Identity = 54/128 (42.19%), Postives = 84/128 (65.62%), Query Frame = 0
BLAST of Moc02g04090 vs. ExPASy TrEMBL
Match: A0A6J1CET8 (DNA repair protein RAD16 OS=Momordica charantia OX=3673 GN=LOC111011036 PE=3 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 8.2e-89 Identity = 186/307 (60.59%), Postives = 215/307 (70.03%), Query Frame = 0
BLAST of Moc02g04090 vs. ExPASy TrEMBL
Match: A0A6J1FYD3 (DNA repair protein RAD16 OS=Cucurbita moschata OX=3662 GN=LOC111448500 PE=3 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80 Identity = 161/261 (61.69%), Postives = 189/261 (72.41%), Query Frame = 0
BLAST of Moc02g04090 vs. ExPASy TrEMBL
Match: A0A6J1J723 (DNA repair protein RAD16 OS=Cucurbita maxima OX=3661 GN=LOC111484062 PE=3 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 7.0e-80 Identity = 159/261 (60.92%), Postives = 189/261 (72.41%), Query Frame = 0
BLAST of Moc02g04090 vs. ExPASy TrEMBL
Match: A0A5D3DZG8 (DNA repair protein RAD16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3695G00010 PE=3 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 3.5e-79 Identity = 169/309 (54.69%), Postives = 209/309 (67.64%), Query Frame = 0
BLAST of Moc02g04090 vs. ExPASy TrEMBL
Match: A0A0A0LN53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416820 PE=3 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 3.5e-79 Identity = 169/309 (54.69%), Postives = 211/309 (68.28%), Query Frame = 0
BLAST of Moc02g04090 vs. TAIR 10
Match: AT1G05120.1 (Helicase protein with RING/U-box domain ) HSP 1 Score: 262.3 bits (669), Expect = 5.0e-70 Identity = 136/258 (52.71%), Postives = 172/258 (66.67%), Query Frame = 0
BLAST of Moc02g04090 vs. TAIR 10
Match: AT1G02670.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 242.7 bits (618), Expect = 4.1e-64 Identity = 132/268 (49.25%), Postives = 176/268 (65.67%), Query Frame = 0
BLAST of Moc02g04090 vs. TAIR 10
Match: AT5G22750.1 (DNA/RNA helicase protein ) HSP 1 Score: 109.4 bits (272), Expect = 5.4e-24 Identity = 54/128 (42.19%), Postives = 84/128 (65.62%), Query Frame = 0
BLAST of Moc02g04090 vs. TAIR 10
Match: AT5G43530.1 (Helicase protein with RING/U-box domain ) HSP 1 Score: 104.8 bits (260), Expect = 1.3e-22 Identity = 80/272 (29.41%), Postives = 127/272 (46.69%), Query Frame = 0
BLAST of Moc02g04090 vs. TAIR 10
Match: AT3G20010.1 (SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related ) HSP 1 Score: 90.5 bits (223), Expect = 2.6e-18 Identity = 39/104 (37.50%), Postives = 64/104 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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