Moc02g03790 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc02g03790
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOB domain-containing protein
Locationchr2: 2801080 .. 2802504 (-)
RNA-Seq ExpressionMoc02g03790
SyntenyMoc02g03790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGCAGCGACACGATCACCGCCGTTTCATCAACTCCTCTATCTCAATCTCCTTCTCCTTCTCCTTCTTCTTCTTCTCCGCCGTCCGTCATTCTCAGTCCTTGCGCGGCGTGCAAGATTCTGAGGCGGAGATGTGCCGACCGATGTGTATTGGCGCCCTATTTCCCGCCCACCGACCCGGCCAAATTCGCCATCGCTCATCGAGTTTATGGCGCTAGCAATATCATCAAATTCTTGCAGGTATTCTTTTCTTTTTACGCCTTTTTGATTGAATTCGTGATTTCTGCTTTTCGTTAACTGTGAATTGCCTACTGTTTAGTGTTTACTTGTAGTTTGGAGACTAAATCAATAAATTAAGGCTGAAAATGCACGTTGATTTTTGATTTACAGACCAAGGATCTTGTTGCTTCCATTTTTTTCTTTTTCACGTTAATTTGTATGTTAGTATGAAAATACTGCGAAAGACCAATAAAGGAGGCTTCAACATCACTATCAAAGAGGAGGCAAAAGGTTTCATTTCACATATTAAGATTCTATACTTTGCAATGAGACTGGGGAATGAAGCTTTCAAAATTGTCTTTTCTTGAAATGTTTGTTGGAAGTGCCGTAAATTATTTGGGCAAGCCATGGACACATGGGAATTTTTTCTATCTAACATTTTGTTTGTTTTTATTCAGCGAACTGTAAACTTTGTTAGTTATGTCTATTCAGTCACCTAACCTATTAAATATCTCAATTTAGTCTCTGAACTAAACTTAACATAATTAATAATTTAATGGCTAAATAAGCACCATACTCACTCATATAATAATTTAACTTTTTCACTTTTACGAGTGGAAGTTTGAAAAGCAGTGTAACCAATCACATCATATTGTGTTTGTTATATTGCTCTCTGAAACCTGAATCAATTCCATGAGAGACTTCAAACACAGAGAGATTCTCCACTGGGCTTCATTTCCCAACTTCTTATTCTCCTCTGTTCTTCTCTGTTTCTGAATATTACAATACAAGAAGAGAAGTTTTCTGTACTGCCCCATCTGTTGCAAACTGAGATTTTTGTTGGGACTTTGATTACAGGAATTGCCTGAATCTCAAAGGGCCGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCGAGGATCAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAGCTCCAAAAGCAAGTGAATGAGCTCCAAGCGCAGCTAGCCAAGGCCCAGGCCGAGCTCGTCAATATGCAGTGCCAGCAAGCCAATCTAGTGGCCTTAGTTTGCAGGGAATTTGCTCAGTCTCATCAATCTGTTGATGATTTCAACTCCAACAGCCCTCACAGTGGCTTTCAGAGCATCAACCAGAGCTACTTTGAGGATACCAATGTAAACCCATTGTGGGAGCCTCTCTGGACATCATGA

mRNA sequence

ATGGAAGGCAGCGACACGATCACCGCCGTTTCATCAACTCCTCTATCTCAATCTCCTTCTCCTTCTCCTTCTTCTTCTTCTCCGCCGTCCGTCATTCTCAGTCCTTGCGCGGCGTGCAAGATTCTGAGGCGGAGATGTGCCGACCGATGTGTATTGGCGCCCTATTTCCCGCCCACCGACCCGGCCAAATTCGCCATCGCTCATCGAGTTTATGGCGCTAGCAATATCATCAAATTCTTGCAGGAATTGCCTGAATCTCAAAGGGCCGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCGAGGATCAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAGCTCCAAAAGCAAGTGAATGAGCTCCAAGCGCAGCTAGCCAAGGCCCAGGCCGAGCTCGTCAATATGCAGTGCCAGCAAGCCAATCTAGTGGCCTTAGTTTGCAGGGAATTTGCTCAGTCTCATCAATCTGTTGATGATTTCAACTCCAACAGCCCTCACAGTGGCTTTCAGAGCATCAACCAGAGCTACTTTGAGGATACCAATGTAAACCCATTGTGGGAGCCTCTCTGGACATCATGA

Coding sequence (CDS)

ATGGAAGGCAGCGACACGATCACCGCCGTTTCATCAACTCCTCTATCTCAATCTCCTTCTCCTTCTCCTTCTTCTTCTTCTCCGCCGTCCGTCATTCTCAGTCCTTGCGCGGCGTGCAAGATTCTGAGGCGGAGATGTGCCGACCGATGTGTATTGGCGCCCTATTTCCCGCCCACCGACCCGGCCAAATTCGCCATCGCTCATCGAGTTTATGGCGCTAGCAATATCATCAAATTCTTGCAGGAATTGCCTGAATCTCAAAGGGCCGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCGAGGATCAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAGCTCCAAAAGCAAGTGAATGAGCTCCAAGCGCAGCTAGCCAAGGCCCAGGCCGAGCTCGTCAATATGCAGTGCCAGCAAGCCAATCTAGTGGCCTTAGTTTGCAGGGAATTTGCTCAGTCTCATCAATCTGTTGATGATTTCAACTCCAACAGCCCTCACAGTGGCTTTCAGAGCATCAACCAGAGCTACTTTGAGGATACCAATGTAAACCCATTGTGGGAGCCTCTCTGGACATCATGA

Protein sequence

MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTDPAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSGFQSINQSYFEDTNVNPLWEPLWTS
Homology
BLAST of Moc02g03790 vs. NCBI nr
Match: XP_022140359.1 (LOB domain-containing protein 1 [Momordica charantia])

HSP 1 Score: 378.6 bits (971), Expect = 3.2e-101
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0

Query: 1   MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTD 60
           MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTD
Sbjct: 1   MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTD 60

Query: 61  PAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSGFQSINQSYF 180
           VNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSGFQSINQSYF
Sbjct: 121 VNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSGFQSINQSYF 180

Query: 181 EDTNVNPLWEPLWTS 196
           EDTNVNPLWEPLWTS
Sbjct: 181 EDTNVNPLWEPLWTS 195

BLAST of Moc02g03790 vs. NCBI nr
Match: XP_038902542.1 (LOB domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 320.5 bits (820), Expect = 1.0e-83
Identity = 169/196 (86.22%), Postives = 182/196 (92.86%), Query Frame = 0

Query: 1   MEGSDTITAVSSTPLSQSPSPSPS-SSSPPSVILSPCAACKILRRRCADRCVLAPYFPPT 60
           MEGSD++T VSSTPLSQSPS S S + SPP V+LSPCAACKILRRRCA+RCVLAPYFPPT
Sbjct: 1   MEGSDSVTTVSSTPLSQSPSSSSSLAPSPPPVVLSPCAACKILRRRCAERCVLAPYFPPT 60

Query: 61  DPAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQK 120
           +PAKFAIAHRV+GASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQK
Sbjct: 61  EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQK 120

Query: 121 QVNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSG-FQSINQS 180
           QVNELQAQLAKAQAE+VNMQCQQANLV+ VCRE AQSHQS DDFN  SPH+G FQSI+ S
Sbjct: 121 QVNELQAQLAKAQAEVVNMQCQQANLVSFVCRELAQSHQSFDDFN-GSPHNGLFQSISPS 180

Query: 181 YFEDTNVNPLWEPLWT 195
           YF+D+NVN LWEPLWT
Sbjct: 181 YFDDSNVNSLWEPLWT 195

BLAST of Moc02g03790 vs. NCBI nr
Match: XP_008463908.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK14330.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80
Identity = 171/199 (85.93%), Postives = 180/199 (90.45%), Query Frame = 0

Query: 1   MEGSD--TITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPP 60
           MEGSD  TIT VSSTPLSQSPS S S + PP VILSPCAACKILRRRCA+RCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TDPAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           T+PAKFAIAHRV+GASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSG-FQSIN- 180
           KQVNELQAQLAKAQAE+VNMQCQQANLVA VCRE AQSHQS D+FN  SPH+G  QSIN 
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFN-GSPHNGLLQSINP 180

Query: 181 QSYFEDT-NVNPLWEPLWT 195
            SYF+D+ NVN LWEPLWT
Sbjct: 181 PSYFDDSNNVNSLWEPLWT 198

BLAST of Moc02g03790 vs. NCBI nr
Match: XP_022947747.1 (LOB domain-containing protein 1-like [Cucurbita moschata])

HSP 1 Score: 308.9 bits (790), Expect = 3.1e-80
Identity = 164/196 (83.67%), Postives = 178/196 (90.82%), Query Frame = 0

Query: 1   MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTD 60
           MEGSD+IT VSSTPLSQSPS S S +SPP ++LSPCAACKILRRRCA RCVLAPYFPPT+
Sbjct: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRV+GASNIIK LQELPESQRADAVSS+VYEA+ARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSH-QSVDDFNSNSPHSGFQSINQSY 180
           VN+LQAQLAKAQAELVNM+CQQANLVA VCRE AQSH Q  DDFN+ SPHSGF SI Q+ 
Sbjct: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNA-SPHSGFHSITQTN 180

Query: 181 FED-TNVNPLWEPLWT 195
           F+D +NVN LWEPLWT
Sbjct: 181 FDDYSNVNQLWEPLWT 195

BLAST of Moc02g03790 vs. NCBI nr
Match: XP_022943961.1 (LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB domain-containing protein 1 [Cucurbita maxima])

HSP 1 Score: 306.6 bits (784), Expect = 1.5e-79
Identity = 166/197 (84.26%), Postives = 178/197 (90.36%), Query Frame = 0

Query: 1   MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTD 60
           MEGSD+I  +SSTP SQSPS S S + PP V+LSPCAACKILRRRCA+ CVLAPYFPPT+
Sbjct: 1   MEGSDSIITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRV+GASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQ-SVDDFNSNSPHSG-FQSINQ- 180
           VNELQAQLAKAQAE+VNMQCQQANLVA VCRE AQSHQ S DD N++S HSG F SI+  
Sbjct: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADS-HSGLFHSISSP 180

Query: 181 SYFEDTNVNPLWEPLWT 195
           SYF+DTNVNPLWEPLWT
Sbjct: 181 SYFDDTNVNPLWEPLWT 196

BLAST of Moc02g03790 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.7e-55
Identity = 124/193 (64.25%), Postives = 146/193 (75.65%), Query Frame = 0

Query: 4   SDTITAVSSTP-LSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTDPA 63
           S +  +V++TP +S S SP PS S  P V+LSPCAACKILRRRCA+RCVLAPYFPPTDPA
Sbjct: 3   SKSDASVATTPIISSSSSPPPSLS--PRVVLSPCAACKILRRRCAERCVLAPYFPPTDPA 62

Query: 64  KFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVN 123
           KF IAHRV+GASNIIKFLQELPESQR DAV+S+VYEA ARIRDPVYG AGAI  LQ+QV+
Sbjct: 63  KFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVS 122

Query: 124 ELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSGFQSINQSYFED 183
           ELQAQLAKAQ E+VNMQ Q++NL+ L+     Q  Q  D+ +  S   GF         +
Sbjct: 123 ELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDK----SN 182

Query: 184 TNVNPL-WEPLWT 195
           TN + L W+PLWT
Sbjct: 183 TNSSMLWWDPLWT 189

BLAST of Moc02g03790 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 2.6e-53
Identity = 124/214 (57.94%), Postives = 147/214 (68.69%), Query Frame = 0

Query: 4   SDTITAVSSTPLSQSPSPSPSSSSPPS--VILSPCAACKILRRRCADRCVLAPYFPPTDP 63
           ++T T V+S   + SP P PS   PP   V+LSPCAACKILRRRCAD+CVLAPYFPPTDP
Sbjct: 22  TETTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDP 81

Query: 64  AKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQV 123
           AKF IAHRV+GASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGAI  LQ+QV
Sbjct: 82  AKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQV 141

Query: 124 NELQAQLAKAQAELVNMQCQQANLVALVCR----------------EFAQSHQSVDDFNS 183
           +ELQAQLAK Q ELV MQ Q+++L+ L+                   F  S +S D+F S
Sbjct: 142 SELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFIS 201

Query: 184 NSPHSGFQSINQSYFEDTNVN-----PLWEPLWT 195
            SP    +S +  + ED N N       W+PLWT
Sbjct: 202 -SPDE--ESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Moc02g03790 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 6.3e-36
Identity = 74/108 (68.52%), Postives = 89/108 (82.41%), Query Frame = 0

Query: 34  SPCAACKILRRRCADRCVLAPYFPPTDPAKFAIAHRVYGASNIIKFLQELPESQRADAVS 93
           SPCA+CK+LRRRCA  C+ APYFPP DP KFAI H+V+GASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 94  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQCQ 142
           SLV+EA+AR+RDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

BLAST of Moc02g03790 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.4e-35
Identity = 73/110 (66.36%), Postives = 90/110 (81.82%), Query Frame = 0

Query: 34  SPCAACKILRRRCADRCVLAPYFPPTDPAKFAIAHRVYGASNIIKFLQELPESQRADAVS 93
           SPCAACK+LRRRCA  CV +PYFP  +P KFA  HRV+GASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 94  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQCQQA 144
           S+VYEA+AR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAE+V+++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

BLAST of Moc02g03790 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-31
Identity = 68/126 (53.97%), Postives = 91/126 (72.22%), Query Frame = 0

Query: 26  SSPPSVI--LSPCAACKILRRRCADRCVLAPYFPPTDPAKFAIAHRVYGASNIIKFLQEL 85
           S PP  +  ++PCAACK+LRRRCA  C  +PYF P +P KFA  H+V+GASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 86  PESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQCQQA 145
           PESQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + ++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

Query: 146 NLVALV 150
               +V
Sbjct: 154 VATLIV 159

BLAST of Moc02g03790 vs. ExPASy TrEMBL
Match: A0A6J1CFI2 (LOB domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111011054 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.5e-101
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0

Query: 1   MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTD 60
           MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTD
Sbjct: 1   MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTD 60

Query: 61  PAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSGFQSINQSYF 180
           VNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSGFQSINQSYF
Sbjct: 121 VNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSGFQSINQSYF 180

Query: 181 EDTNVNPLWEPLWTS 196
           EDTNVNPLWEPLWTS
Sbjct: 181 EDTNVNPLWEPLWTS 195

BLAST of Moc02g03790 vs. ExPASy TrEMBL
Match: A0A5D3CSE3 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00590 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.1e-81
Identity = 171/199 (85.93%), Postives = 180/199 (90.45%), Query Frame = 0

Query: 1   MEGSD--TITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPP 60
           MEGSD  TIT VSSTPLSQSPS S S + PP VILSPCAACKILRRRCA+RCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TDPAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           T+PAKFAIAHRV+GASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSG-FQSIN- 180
           KQVNELQAQLAKAQAE+VNMQCQQANLVA VCRE AQSHQS D+FN  SPH+G  QSIN 
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFN-GSPHNGLLQSINP 180

Query: 181 QSYFEDT-NVNPLWEPLWT 195
            SYF+D+ NVN LWEPLWT
Sbjct: 181 PSYFDDSNNVNSLWEPLWT 198

BLAST of Moc02g03790 vs. ExPASy TrEMBL
Match: A0A1S3CKA7 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.1e-81
Identity = 171/199 (85.93%), Postives = 180/199 (90.45%), Query Frame = 0

Query: 1   MEGSD--TITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPP 60
           MEGSD  TIT VSSTPLSQSPS S S + PP VILSPCAACKILRRRCA+RCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TDPAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           T+PAKFAIAHRV+GASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSG-FQSIN- 180
           KQVNELQAQLAKAQAE+VNMQCQQANLVA VCRE AQSHQS D+FN  SPH+G  QSIN 
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFN-GSPHNGLLQSINP 180

Query: 181 QSYFEDT-NVNPLWEPLWT 195
            SYF+D+ NVN LWEPLWT
Sbjct: 181 PSYFDDSNNVNSLWEPLWT 198

BLAST of Moc02g03790 vs. ExPASy TrEMBL
Match: A0A6J1G7A9 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451518 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 164/196 (83.67%), Postives = 178/196 (90.82%), Query Frame = 0

Query: 1   MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTD 60
           MEGSD+IT VSSTPLSQSPS S S +SPP ++LSPCAACKILRRRCA RCVLAPYFPPT+
Sbjct: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRV+GASNIIK LQELPESQRADAVSS+VYEA+ARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSH-QSVDDFNSNSPHSGFQSINQSY 180
           VN+LQAQLAKAQAELVNM+CQQANLVA VCRE AQSH Q  DDFN+ SPHSGF SI Q+ 
Sbjct: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNA-SPHSGFHSITQTN 180

Query: 181 FED-TNVNPLWEPLWT 195
           F+D +NVN LWEPLWT
Sbjct: 181 FDDYSNVNQLWEPLWT 195

BLAST of Moc02g03790 vs. ExPASy TrEMBL
Match: A0A6J1J8I0 (LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.4e-80
Identity = 166/197 (84.26%), Postives = 178/197 (90.36%), Query Frame = 0

Query: 1   MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTD 60
           MEGSD+I  +SSTP SQSPS S S + PP V+LSPCAACKILRRRCA+ CVLAPYFPPT+
Sbjct: 1   MEGSDSIITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRV+GASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQ-SVDDFNSNSPHSG-FQSINQ- 180
           VNELQAQLAKAQAE+VNMQCQQANLVA VCRE AQSHQ S DD N++S HSG F SI+  
Sbjct: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADS-HSGLFHSISSP 180

Query: 181 SYFEDTNVNPLWEPLWT 195
           SYF+DTNVNPLWEPLWT
Sbjct: 181 SYFDDTNVNPLWEPLWT 196

BLAST of Moc02g03790 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 215.7 bits (548), Expect = 3.3e-56
Identity = 124/193 (64.25%), Postives = 146/193 (75.65%), Query Frame = 0

Query: 4   SDTITAVSSTP-LSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTDPA 63
           S +  +V++TP +S S SP PS S  P V+LSPCAACKILRRRCA+RCVLAPYFPPTDPA
Sbjct: 3   SKSDASVATTPIISSSSSPPPSLS--PRVVLSPCAACKILRRRCAERCVLAPYFPPTDPA 62

Query: 64  KFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVN 123
           KF IAHRV+GASNIIKFLQELPESQR DAV+S+VYEA ARIRDPVYG AGAI  LQ+QV+
Sbjct: 63  KFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVS 122

Query: 124 ELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSGFQSINQSYFED 183
           ELQAQLAKAQ E+VNMQ Q++NL+ L+     Q  Q  D+ +  S   GF         +
Sbjct: 123 ELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDK----SN 182

Query: 184 TNVNPL-WEPLWT 195
           TN + L W+PLWT
Sbjct: 183 TNSSMLWWDPLWT 189

BLAST of Moc02g03790 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-54
Identity = 124/214 (57.94%), Postives = 147/214 (68.69%), Query Frame = 0

Query: 4   SDTITAVSSTPLSQSPSPSPSSSSPPS--VILSPCAACKILRRRCADRCVLAPYFPPTDP 63
           ++T T V+S   + SP P PS   PP   V+LSPCAACKILRRRCAD+CVLAPYFPPTDP
Sbjct: 22  TETTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDP 81

Query: 64  AKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQV 123
           AKF IAHRV+GASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGAI  LQ+QV
Sbjct: 82  AKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQV 141

Query: 124 NELQAQLAKAQAELVNMQCQQANLVALVCR----------------EFAQSHQSVDDFNS 183
           +ELQAQLAK Q ELV MQ Q+++L+ L+                   F  S +S D+F S
Sbjct: 142 SELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFIS 201

Query: 184 NSPHSGFQSINQSYFEDTNVN-----PLWEPLWT 195
            SP    +S +  + ED N N       W+PLWT
Sbjct: 202 -SPDE--ESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Moc02g03790 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 152.1 bits (383), Expect = 4.5e-37
Identity = 74/108 (68.52%), Postives = 89/108 (82.41%), Query Frame = 0

Query: 34  SPCAACKILRRRCADRCVLAPYFPPTDPAKFAIAHRVYGASNIIKFLQELPESQRADAVS 93
           SPCA+CK+LRRRCA  C+ APYFPP DP KFAI H+V+GASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 94  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQCQ 142
           SLV+EA+AR+RDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

BLAST of Moc02g03790 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 149.1 bits (375), Expect = 3.8e-36
Identity = 73/110 (66.36%), Postives = 90/110 (81.82%), Query Frame = 0

Query: 34  SPCAACKILRRRCADRCVLAPYFPPTDPAKFAIAHRVYGASNIIKFLQELPESQRADAVS 93
           SPCAACK+LRRRCA  CV +PYFP  +P KFA  HRV+GASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 94  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQCQQA 144
           S+VYEA+AR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAE+V+++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

BLAST of Moc02g03790 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-32
Identity = 68/126 (53.97%), Postives = 91/126 (72.22%), Query Frame = 0

Query: 26  SSPPSVI--LSPCAACKILRRRCADRCVLAPYFPPTDPAKFAIAHRVYGASNIIKFLQEL 85
           S PP  +  ++PCAACK+LRRRCA  C  +PYF P +P KFA  H+V+GASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 86  PESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQCQQA 145
           PESQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + ++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

Query: 146 NLVALV 150
               +V
Sbjct: 154 VATLIV 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022140359.13.2e-101100.00LOB domain-containing protein 1 [Momordica charantia][more]
XP_038902542.11.0e-8386.22LOB domain-containing protein 1 [Benincasa hispida][more]
XP_008463908.11.1e-8085.93PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB... [more]
XP_022947747.13.1e-8083.67LOB domain-containing protein 1-like [Cucurbita moschata][more]
XP_022943961.11.5e-7984.26LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB do... [more]
Match NameE-valueIdentityDescription
Q9LQR04.7e-5564.25LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=... [more]
Q9SK082.6e-5357.94LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S... [more]
Q8LBW36.3e-3668.52LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
Q9SHE95.4e-3566.36LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
Q8L5T52.1e-3153.97LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A6J1CFI21.5e-101100.00LOB domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111011054 P... [more]
A0A5D3CSE35.1e-8185.93LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3CKA75.1e-8185.93LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=... [more]
A0A6J1G7A91.5e-8083.67LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114515... [more]
A0A6J1J8I07.4e-8084.26LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3... [more]
Match NameE-valueIdentityDescription
AT1G07900.13.3e-5664.25LOB domain-containing protein 1 [more]
AT2G28500.11.8e-5457.94LOB domain-containing protein 11 [more]
AT2G30130.14.5e-3768.52Lateral organ boundaries (LOB) domain family protein [more]
AT1G31320.13.8e-3666.36LOB domain-containing protein 4 [more]
AT2G40470.11.5e-3253.97LOB domain-containing protein 15 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR31301:SF141LOB DOMAIN-CONTAINING PROTEIN 1-LIKEcoord: 11..191
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 11..191
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 35..132
e-value: 1.3E-40
score: 138.0
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 34..135
score: 25.793749

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc02g03790.1Moc02g03790.1mRNA