Moc02g02520 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g02520
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Protein HIRA
Location	chr2: 1893113 .. 1894667 (+)
RNA-Seq Expression	Moc02g02520
Synteny	Moc02g02520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGCAGAAAAACCTAGTTGGGTTAGGCATGAAGGCATGCAAATTTTCTCGATTGATGTCCAACCTGGTGGACTGAGATTCGCCACTGGAGGAGGTGATCACAAGGTAAAATTTTCCTTTTTATCATTTTTTACTCTTGTTGGTGGCGAATAAGAACCTGGCTAATATGGAAGGACTTCTATTGTTATTTATAACTGGTACTGAGAAAAATGTATACTTTTTCCAATTAGCGCTGGAGCTATGGCACACCATCATTATCCTTTTACTTTATAGTTGATGAGAGTGGTCTAGACCGTATAAACTTGTGCGAATTTCTTAAATTTTGTTTTGCTTTTCTCTTGTTCTCTTAGATAATCCGGAGAAAACTATAATGCTTGTTGAAGACGATCGAGTTGACTCTGTAGTGCATGTTTCGTGTCTTTGAATAGTGGAGTGAATTTGAATTGAAAATTTCGTGTCTTACTGCTCCCGTTAACGCTTAAAAAACAGAGGTCAGCCTGTTTCCCCTTCTCCTCAACATCAAAGTTTGTTACTTCATCTGACTAGTTGTGGTCTGAGGCCCTGGCTTTCTCGTTATGTATCTCAGCTCTAGATGAGTGGCATCCCCATGACTTGCCATTGACTTCATAGCACCTCCTCTGCATGTCACCTACTATTAATACCTTCTAAACAATGTAAACCCATCTCCACTATTGTTTTGAACTCTGATTCTGATTGTCACAGGATTGAGTTTAACTGTCGGAGAGTGCTTCTTAACAGCTCTCATGAGAGTTTCCATATACACATGCATGCGTCTCAAATTGTGTTGTATTACTAATGCAGTTTTGTTGAAGCATGGTTGGCAAGTATAATTTTTTGATGTGGTGTTGGTTGTGATATGTGATTGCTGTGATTATAATTAAATTCAATTCAGTAAGCCACTAAATCACTTACATCCTAGTTACATACTGTACTTCTGTAGGTTCGGATATGGAATGTGAAATCTGTTGGTAGGAACTTAGAAGATGATGCTTCAAATCAGAGGCTTCTTGCAACTCTTCGTGATCACTTTGGGTCAGTTAATTGTGTTAGATGGGCTAAGCATGGGCGTTTTGTGGCATCAGGGTCTGATGATCAAACAATTCTTGTACATGAAAAGAAACCTGGTTCAGGGACCACTGAATTTGGAAGTGGGGAGCCCCCGGATGTTGAAAATTGGAAGGTTGCTATGACTTTGAGAGGGCACACAGCTGATGTGGTAATGATTTAGCTTTTGATTATGGAATTTATTGGATAGCATATTAGTCATTCATATCTTAAAACTTATTCGATGATCTGATTTGTTCATGCGGGATTTATTGCATTTGATCGAGTTTAAATTTTTTGAAAAAAATAAGTATCAATTTGGGAGCATGGCGATGTCTGTTTTTCATAAACTGTTTGTAGTTGTGGGTCGGTTATAATTTCCAGTTTGCTGACTCATTGACATATTTAATCCATCCTGATAAGTGCGTTACTGATGGCCCCATTGATTGCATCTAACCTGGGAGTTATATTTAAATGCATGAAGTAG

mRNA sequence

ATGATTGCAGAAAAACCTAGTTGGGTTAGGCATGAAGGCATGCAAATTTTCTCGATTGATGTCCAACCTGGTGGACTGAGATTCGCCACTGGAGGAGGTGATCACAAGGTTCGGATATGGAATGTGAAATCTGTTGGTAGGAACTTAGAAGATGATGCTTCAAATCAGAGGCTTCTTGCAACTCTTCGTGATCACTTTGGGTCAGTTAATTGTGTTAGATGGGCTAAGCATGGGCGTTTTGTGGCATCAGGGTCTGATGATCAAACAATTCTTGTACATGAAAAGAAACCTGGTTCAGGGACCACTGAATTTGGAAGTGGGGAGCCCCCGGATGTTGAAAATTGGAAGGTTGCTATGACTTTGAGAGGGCACACAGCTGATGTGTAG

Coding sequence (CDS)

ATGATTGCAGAAAAACCTAGTTGGGTTAGGCATGAAGGCATGCAAATTTTCTCGATTGATGTCCAACCTGGTGGACTGAGATTCGCCACTGGAGGAGGTGATCACAAGGTTCGGATATGGAATGTGAAATCTGTTGGTAGGAACTTAGAAGATGATGCTTCAAATCAGAGGCTTCTTGCAACTCTTCGTGATCACTTTGGGTCAGTTAATTGTGTTAGATGGGCTAAGCATGGGCGTTTTGTGGCATCAGGGTCTGATGATCAAACAATTCTTGTACATGAAAAGAAACCTGGTTCAGGGACCACTGAATTTGGAAGTGGGGAGCCCCCGGATGTTGAAAATTGGAAGGTTGCTATGACTTTGAGAGGGCACACAGCTGATGTGTAG

Protein sequence

MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLATLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMTLRGHTADV

Homology

[Close]

BLAST of Moc02g02520 vs. NCBI nr
Match: XP_022153080.1 (protein HIRA isoform X1 [Momordica charantia])

HSP 1 Score: 275.0 bits (702), Expect = 3.2e-70
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. NCBI nr
Match: XP_038900918.1 (protein HIRA isoform X1 [Benincasa hispida] >XP_038900919.1 protein HIRA isoform X1 [Benincasa hispida])

HSP 1 Score: 269.6 bits (688), Expect = 1.4e-68
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGR+LEDD SNQRLLA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRSLEDDDSNQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAKHGR+VASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. NCBI nr
Match: XP_004149254.1 (protein HIRA isoform X1 [Cucumis sativus] >KGN46946.1 hypothetical protein Csa_020905 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 1.4e-68
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGR+LEDD SNQRLLA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRSLEDDDSNQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAKHGR+VASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. NCBI nr
Match: XP_031742676.1 (protein HIRA isoform X2 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 1.4e-68
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGR+LEDD SNQRLLA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRSLEDDDSNQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAKHGR+VASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. NCBI nr
Match: XP_008458588.1 (PREDICTED: protein HIRA isoform X1 [Cucumis melo] >KAA0033404.1 protein HIRA isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 269.6 bits (688), Expect = 1.4e-68
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGR+LEDD SNQRLLA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRSLEDDDSNQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAKHGR+VASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. ExPASy Swiss-Prot
Match: Q652L2 (Protein HIRA OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0567700 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.5e-59
Identity = 98/128 (76.56%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MI EKPSW+RHEG+QIFSID+QPGG+RFATGGGD K+RIW++KSV ++ + D S+QRLLA
Sbjct: 1   MITEKPSWIRHEGLQIFSIDIQPGGIRFATGGGDQKIRIWSMKSVAKDNDSDDSSQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           T+RDHFG+VNCVRWA HGR++ASGSDDQ I +HE+K G+GT+EFGSGEPPDVENWKV MT
Sbjct: 61  TIRDHFGTVNCVRWAHHGRYLASGSDDQVIQIHERKAGTGTSEFGSGEPPDVENWKVVMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. ExPASy Swiss-Prot
Match: Q9LXN4 (Protein HIRA OS=Arabidopsis thaliana OX=3702 GN=HIRA PE=1 SV=2)

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-58
Identity = 102/128 (79.69%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKP WV+HEG+QIFSIDVQP G RFATGGGDHKVRIWN+KSV ++L++  + +RLLA
Sbjct: 1   MIAEKPFWVKHEGLQIFSIDVQPNGERFATGGGDHKVRIWNMKSVDKDLQNIDTKERLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAK+ R+VASGSDDQ I +HE+KPGSGTTEFGSGE PDVENWK  MT
Sbjct: 61  TLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. ExPASy Swiss-Prot
Match: Q32SG6 (Protein HIRA OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 6.6e-58
Identity = 100/128 (78.12%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MI EKPSW+RHEG+QIFSID+Q GGLRFATGGGD KVRIW+++SV ++  ++ S QRLLA
Sbjct: 1   MILEKPSWIRHEGLQIFSIDIQTGGLRFATGGGDQKVRIWSMESVHKDNTNNDSKQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAKHGR++ASGSDDQ IL+HE+K GSGT+EFGSGEPPD ENWKV MT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYLASGSDDQVILIHERKAGSGTSEFGSGEPPDAENWKVIMT 120

Query: 121 LRGHTADV 129
            RGHTADV
Sbjct: 121 WRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. ExPASy Swiss-Prot
Match: P0CS39 (Protein HIR1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=HIR1 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 63/135 (46.67%), Postives = 77/135 (57.04%), Query Frame = 0


Query: 1   MIAEKPSWVRH------EGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSV-GRNLEDDA 60
           M   KP+WV H          I+SI V P G R ATGG DHKV+IW+   +     E + 
Sbjct: 1   MKVTKPNWVEHTVGEKKAKTAIYSISVHPDGTRLATGGLDHKVKIWSTLPILDVEAEKEE 60

Query: 61  SNQRLLATLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVE 120
            N +LL T+  H GSV  VRWA HGRF+A+GSDDQ I++    P  G   +GS E  +VE
Sbjct: 61  ENPKLLCTMSSHTGSVLSVRWAHHGRFLATGSDDQVIMIWGLDPDGGGRLWGSDE-INVE 120

Query: 121 NWKVAMTLRGHTADV 129
           NWK    L GH ADV
Sbjct: 121 NWKALTRLVGHVADV 134

[Close]

BLAST of Moc02g02520 vs. ExPASy Swiss-Prot
Match: P0CS38 (Protein HIR1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=HIR1 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 63/135 (46.67%), Postives = 77/135 (57.04%), Query Frame = 0


Query: 1   MIAEKPSWVRH------EGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSV-GRNLEDDA 60
           M   KP+WV H          I+SI V P G R ATGG DHKV+IW+   +     E + 
Sbjct: 1   MKVTKPNWVEHTVGEKKAKTAIYSISVHPDGTRLATGGLDHKVKIWSTLPILDVEAEKEE 60

Query: 61  SNQRLLATLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVE 120
            N +LL T+  H GSV  VRWA HGRF+A+GSDDQ I++    P  G   +GS E  +VE
Sbjct: 61  ENPKLLCTMSSHTGSVLSVRWAHHGRFLATGSDDQVIMIWGLDPDGGGRLWGSDE-INVE 120

Query: 121 NWKVAMTLRGHTADV 129
           NWK    L GH ADV
Sbjct: 121 NWKALTRLVGHVADV 134

[Close]

BLAST of Moc02g02520 vs. ExPASy TrEMBL
Match: A0A6J1DFS6 (Protein HIRA OS=Momordica charantia OX=3673 GN=LOC111020668 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.6e-70
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. ExPASy TrEMBL
Match: A0A5A7SQD5 (Protein HIRA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00560 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.6e-69
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGR+LEDD SNQRLLA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRSLEDDDSNQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAKHGR+VASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. ExPASy TrEMBL
Match: A0A0A0KGQ8 (Protein HIRA OS=Cucumis sativus OX=3659 GN=Csa_6G152320 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.6e-69
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGR+LEDD SNQRLLA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRSLEDDDSNQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAKHGR+VASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. ExPASy TrEMBL
Match: A0A1S3C8B1 (Protein HIRA OS=Cucumis melo OX=3656 GN=LOC103497947 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.6e-69
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGR+LEDD SNQRLLA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRSLEDDDSNQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAKHGR+VASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. ExPASy TrEMBL
Match: A0A6J1JDV7 (Protein HIRA OS=Cucurbita maxima OX=3661 GN=LOC111483642 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.3e-68
Identity = 124/128 (96.88%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKPSWVRHEG QIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGR+LEDD SNQRLLA
Sbjct: 1   MIAEKPSWVRHEGTQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRSLEDDDSNQRLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAKHGR+VASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. TAIR 10
Match: AT3G44530.1 (homolog of histone chaperone HIRA )

HSP 1 Score: 226.9 bits (577), Expect = 9.4e-60
Identity = 102/128 (79.69%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKP WV+HEG+QIFSIDVQP G RFATGGGDHKVRIWN+KSV ++L++  + +RLLA
Sbjct: 1   MIAEKPFWVKHEGLQIFSIDVQPNGERFATGGGDHKVRIWNMKSVDKDLQNIDTKERLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAK+ R+VASGSDDQ I +HE+KPGSGTTEFGSGE PDVENWK  MT
Sbjct: 61  TLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. TAIR 10
Match: AT3G44530.2 (homolog of histone chaperone HIRA )

HSP 1 Score: 226.9 bits (577), Expect = 9.4e-60
Identity = 102/128 (79.69%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLA 60
           MIAEKP WV+HEG+QIFSIDVQP G RFATGGGDHKVRIWN+KSV ++L++  + +RLLA
Sbjct: 1   MIAEKPFWVKHEGLQIFSIDVQPNGERFATGGGDHKVRIWNMKSVDKDLQNIDTKERLLA 60

Query: 61  TLRDHFGSVNCVRWAKHGRFVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120
           TLRDHFGSVNCVRWAK+ R+VASGSDDQ I +HE+KPGSGTTEFGSGE PDVENWK  MT
Sbjct: 61  TLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMT 120

Query: 121 LRGHTADV 129
           LRGHTADV
Sbjct: 121 LRGHTADV 128

[Close]

BLAST of Moc02g02520 vs. TAIR 10
Match: AT5G23430.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 3.2e-07
Identity = 29/91 (31.87%), Postives = 44/91 (48.35%), Query Frame = 0


Query: 18  SIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLATLRDHFGSVNCVRWAKH 77
           S+D  P G  FA+G  D  ++IW+++  G            + T + H   VN +R+   
Sbjct: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKG-----------CIHTYKGHTRGVNVLRFTPD 165

Query: 78  GRFVASGSDDQTILVHEKKPGSGTTEFGSGE 109
           GR+V SG +D  + V +   G   TEF S E
Sbjct: 166 GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185

[Close]

BLAST of Moc02g02520 vs. TAIR 10
Match: AT5G23430.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 3.2e-07
Identity = 29/91 (31.87%), Postives = 44/91 (48.35%), Query Frame = 0


Query: 18  SIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLATLRDHFGSVNCVRWAKH 77
           S+D  P G  FA+G  D  ++IW+++  G            + T + H   VN +R+   
Sbjct: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKG-----------CIHTYKGHTRGVNVLRFTPD 165

Query: 78  GRFVASGSDDQTILVHEKKPGSGTTEFGSGE 109
           GR+V SG +D  + V +   G   TEF S E
Sbjct: 166 GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185

[Close]

BLAST of Moc02g02520 vs. TAIR 10
Match: AT5G08390.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 7.8e-06
Identity = 26/91 (28.57%), Postives = 43/91 (47.25%), Query Frame = 0


Query: 18  SIDVQPGGLRFATGGGDHKVRIWNVKSVGRNLEDDASNQRLLATLRDHFGSVNCVRWAKH 77
           S++  P G  FA+G  D  ++IW+++  G            + T + H   VN +R+   
Sbjct: 106 SVNFHPFGEFFASGSLDTNLKIWDIRKKG-----------CIHTYKGHTRGVNVLRFTPD 165

Query: 78  GRFVASGSDDQTILVHEKKPGSGTTEFGSGE 109
           GR++ SG +D  + V +   G    EF S E
Sbjct: 166 GRWIVSGGEDNVVKVWDLTAGKLLHEFKSHE 185

The following BLAST results are available for this feature:

BLAST of Moc02g02520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153080.1	3.2e-70	100.00	protein HIRA isoform X1 [Momordica charantia]	[more]
XP_038900918.1	1.4e-68	97.66	protein HIRA isoform X1 [Benincasa hispida] >XP_038900919.1 protein HIRA isoform...	[more]
XP_004149254.1	1.4e-68	97.66	protein HIRA isoform X1 [Cucumis sativus] >KGN46946.1 hypothetical protein Csa_0...	[more]
XP_031742676.1	1.4e-68	97.66	protein HIRA isoform X2 [Cucumis sativus]	[more]
XP_008458588.1	1.4e-68	97.66	PREDICTED: protein HIRA isoform X1 [Cucumis melo] >KAA0033404.1 protein HIRA iso...	[more]

BLAST of Moc02g02520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q652L2	3.5e-59	76.56	Protein HIRA OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0567700 PE=2 SV=1	[more]
Q9LXN4	1.3e-58	79.69	Protein HIRA OS=Arabidopsis thaliana OX=3702 GN=HIRA PE=1 SV=2	[more]
Q32SG6	6.6e-58	78.13	Protein HIRA OS=Zea mays OX=4577 PE=1 SV=1	[more]
P0CS39	1.1e-25	46.67	Protein HIR1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-350...	[more]
P0CS38	1.1e-25	46.67	Protein HIR1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21...	[more]

BLAST of Moc02g02520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DFS6	1.6e-70	100.00	Protein HIRA OS=Momordica charantia OX=3673 GN=LOC111020668 PE=3 SV=1	[more]
A0A5A7SQD5	6.6e-69	97.66	Protein HIRA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00560 P...	[more]
A0A0A0KGQ8	6.6e-69	97.66	Protein HIRA OS=Cucumis sativus OX=3659 GN=Csa_6G152320 PE=3 SV=1	[more]
A0A1S3C8B1	6.6e-69	97.66	Protein HIRA OS=Cucumis melo OX=3656 GN=LOC103497947 PE=3 SV=1	[more]
A0A6J1JDV7	3.3e-68	96.88	Protein HIRA OS=Cucurbita maxima OX=3661 GN=LOC111483642 PE=3 SV=1	[more]

BLAST of Moc02g02520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44530.1	9.4e-60	79.69	homolog of histone chaperone HIRA	[more]
AT3G44530.2	9.4e-60	79.69	homolog of histone chaperone HIRA	[more]
AT5G23430.1	3.2e-07	31.87	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G23430.2	3.2e-07	31.87	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G08390.1	7.8e-06	28.57	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 55..94 e-value: 2.5E-7 score: 40.4 coord: 1..41 e-value: 0.016 score: 24.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 57..92 e-value: 5.3E-7 score: 30.2 coord: 11..41 e-value: 0.0013 score: 19.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 62..92 score: 9.03805
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 9..44 score: 10.007177
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 4..128 e-value: 1.7E-22 score: 82.2
IPR031120	WD repeat HIR1	PANTHER	PTHR13831	MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS	coord: 1..128
None	No IPR available	PANTHER	PTHR13831:SF3	PROTEIN HIRA	coord: 1..128
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 15..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g02520.1	Moc02g02520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006336	DNA replication-independent chromatin assembly
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006325	chromatin organization
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0000417	HIR complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031491	nucleosome binding
molecular_function	GO:0005515	protein binding