Moc02g02130 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g02130
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Replication factor C subunit 1
Location	chr2: 1584446 .. 1596992 (-)
RNA-Seq Expression	Moc02g02130
Synteny	Moc02g02130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGTTTGGGCGTTCGTTGTTAATTACTGTTAGTGTGGTACTCGCATTATTTCTTTAATAGTCGCAATAAAGGAAGTTAGTACATATATCTTTCTCCTCAACTGGATTTTTTCTTATGAGTTTGGGCTCGATCAAGAATGACATTTACATAATTCATACTTGATAGTGTTTGTTTCGTTATTCTTTACCATTATAATTATGATGTGATAAACAGGCGGATATTAGGAAATGGTTCATGAAAGCACACGACAAAGACAATGGCAGTGCGTTGAAGCATGCAAAGCCTGCTGCAAGCAATTCAGAGAAAGCTGCTACAGCCGAACCACAGTCCGGAAAAACAGTGTGTTTTCTGACCTCACTCTTCTTAGTAGTTGAGATGGCATATGTTCCAAGTACCATTATACTCTTTATGTATCTCTAGTTTCTTTAGCTGCATACTTTGTTGGTCCTTTTGGTTCATAATAACTTATTGTTATGTGGATGGATGTCTATTTCTGGAACCATAATTCTCGTATGAATTGGTCTATCTGGTATTTCTGAAAGAAAACTGAGCTATATTTAAAAATTGGACTTGAGTGCATTCTTGAGATGAGATGTTAAAAAGCACATTTTAATTGTTTCTATTGCCTTGATTCTACAAGAAAGAGAAAGTTGGGACAATATTTGTCTGAATAATACTCTGAATGAGCAGACAAATATTTCATCTCGATGTTCTTTTGCTGCTCGTTTTTGGGACATTATCCTCACTGCTTTTGGATGGAAGACTGCACTGCACATTCACCCTGCCATTTTCCTTGACTGCTTACTGTTTGGACACCCTTTTAAAAAGGAAAAGGCTACACTGTGGGTTCAATTTATAAGGGCTTTCTTATGGAGTCTTTGGTTGGAGAGAAACAATAGGGTCTTTAATGATAAAGTTCTTCCCTTTGAGATCTTTTTTGACAGAGTTACTCTCTTAACTCTTGGATGGTGTAAATGTTTCTACTCACCTTTTAATAGCTACTCTCTTAACAATCTTATTACAAGCTGGAAGGCTTTCTTGTAATTGCCCATGTGGCCTTTTGTATATTTCATACTATCAATGAAATATTTGTTTCCTTCCAAAAAAAATACTGTACACGTTTCTCTTTCTTTTCCCTATTGACTAAGAGTTCTAAACTCCTTGGGAAAACAATACTGCGTGCAGTTAGACTTGTAATATCTTTTGTTTACTTCTTTCTAATGTTATGCTACTGCAATAAGAGATTCGTTTGCTGACTAATGATATTGCAGGGGCTGAGTGGTGGGGAAAGTACTGGCAGAAGGATAACTAGTAAGTACTTTGCCTCAGAAAAGCAGAAGTCCAAGGACGCAAAAGAAATAGAGGGACTCCCGATCAAAAGAAAGTCTCCACAGGATGCGAAGGAATCACCAGCCAAAAGAAAGTCTCAAAAAGATAGTGAGGAATCACCGAAAGCTCCACCTTCAAAAAAATTAAACAAAACTGATGACAACGACGATGATTTTGTTTTGTCTAGTTCTAGAAAGAACTTGTCTGACGTCACTCCCAACAAAAAGTTGAAGAGTGGTTCTGGAAAGGGAATTACTCAGAAACCTGTAGAGATTGAAGAAAGTGATGACGAGGAAGCTAAAGGTACCGAGTCTTCTCTGAAGCCTAGTGGAAGGGGTAGGGGGGCAAGGGGTTCATCTGCTGCAACTGTTAGTGGTAGAGGCAGAGGCGGTGGACGGGGTGGATTTATGAATTTTGGGGAAAGGAAAGATCCTCCACACAAAGGAGAAAAGGTGAAAATTTATTTTAAGTATTTGGACTGACAAGAATTCATTCTGTTATGTGCATTATTATAATATAGTGTTTAGTTTTTTCCCTGCTTGTTTCTCAGGAAGTCCCTGAAGGCGCTCCTGACTGTTTAGCTGGACTAACTTTTGTAATTAGTGGAACCCTTGACAGGTCATTCCTCTGATTTTCTCAGTTATGATTATTGGATCAGGAGCATAGTTCCGAACATTTTGTCTTGTTAAACTGAAATGTAATTCTCCTGATGCAATGAAGTTTGTTATGCGAATGCATCATTGTTTTCCTTAACATCTTTTTTGTTACACGTTCCTTTTCTTTTGAAATGAATTCATGATTTTCCAATTAGTAGGGTTCCTGGTACATGGTCATCTTTAAACTTTCATATTTATATCAGTGTCATTTTGCCTCTATCATGAAGTATGCTCCCTTCTCGATGTATTTTGGTGTTGCATGGTGTTGTTATACATCTTATAAGCATGGAAGTGATAATGGTCATGGGCCATATTACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGACGCATAACTGGATCTATCAGCAAAAAAACAGTTAACTCATTCTTGTATCTTTTTACTTATCCAAGAAAGAAAAAAGAACTTGCACACTTTTTGTGATTTGGTTGGCTATTCAATTTTCTGTGTGGAGACAAATTATGGACGTTTATGTTTGCAGAATTATCTACTATGTGATGAAGATATTGGGGGTCGAAAATCTTCCAAAGCTAAAGAGCTGGGGTATTTTTCCTTGGTTTATAATTGAAATGGAATGTACTCACTCCTGTATTTTCATTTACCTCTTTTAAATTTTCATTTTCTTTTCATTTACCTCTTTTAAATTTTCATTCTCTCTCTTTTTGTAGAACTGCTTTTCTCACTGAGGATGGCTTATTTGACATGATCCGTGCATCATCCGACACTAAAGCTCCTCCAAGACAAGAATCTAAAAAATCTGTTGTTAAGTCCTTGGAATCTCCAACAGAGAAAAACTCCCAAAAAGTACCAGCAGTACAAGCAAAGAGTAAGTCTGCCTACTTATCTGATTGGAATACGAATACTGATGCCACTAGGACTGTTGTTGTCAAACTTTTGACGAACATTTATATAGGGGGGAGCTGATGGTTTTATTATTGTGCTATATAATAATATAGTTTTTTAGCTTTAAAAAATGGGGAAAATATCTTATGTTGAGCATGCCAATATTTCTGTTTGGGTTATTGTTGTCGGGTTGCAAATTGTTTATGCAATCATTTTTTTAGACGTTAGCCGGGTAAGGACTCTTTCATGTTCACTAAACCTTTCTCTAAGATTGAGTCATCATTTTTCCCTTTGCCTTTTGTGTGTGTAAGAAATAATTTCATTGATAGTATGAAGTTACAAAAGGGCCCTATGCAAGGGATTACATAAAACAATTCCAATTGGATAAAAGGGAAGAAAAACTATAGTGATGGAACAAAGGGGAGTATTTACACCATAAAACAAGCGGACAACCAAATAAACTATGACTTTACCTCCATTTAATTGAGTGCTTGAATTCAGATTAACCCTATATTGGGTATCACCTGTGATATCGTAGTCATCCTTTCCATTAGTTTCTCTCTGCACGTTTCGTGTTAGAAGAAGTGGCAATGTGGGCTTAATTGTTGGTGCCATTTTTTAAGCATTTATATCTTCTCCAAATTCTTTGATATATTCTCTAGATATGTAAACTGTCAAGACCAAAGGATCTTCGACTGGAGGATCTTTATAAGGAAACTGCAAGATTCTTTATCCATGAATCACGAATCATATTTCTCTGCCTCAATTGCTTGTAAAAAGAAAAAAAAAATTGCTTGTAAATTGTTAGCATAGTTTGTAGATTCTTAGCAAGTGTTTCTTAGTTTTAGATTAATGATCTAGGACCATATCCTCCTCATTAGTCTTACCTATGCTTTTTTTCCTCCCTCAATTTCAATGAGAACCATGCCCTTTTAGCTAAAGCTGTCAACGGTATCAGAACTACTCACATTCCTTGAGAGAACTTGTGGGCCTTCATTGGCTTGAGCTTCCTTGTTTCTATTTGTTCGATCAGCACTATACCAAATCATTCTTTCTTTGGCATGAGAGGCAGTCTGTTGGGGTGGCAAAAGCTTTTCCAGAAATATCCCTGAGATTCTTTTGAATAGCCACTGTGTTTTTGTGAAAGTTTGTCTTTTGTTTCTGTAGTCTCTGTGGAGTTTCCTTGGCTCTTCACCCACACCTGTATGTAGACGTACCTTAAACATGTTCAACATTCTTCAGTGTTTGGTTCTTAGGGTTATCTATTTTTCCTACTCTTTCTTGTGAGTTTGTGACAGTTGATATGGCTAATAGTGAGGACAAGTCAAGCATTGTCCCAGAGATAACAACCATTGATGTAACAGAGACTTAAGATATTCAATCCACCCTAGGTTGGAGTTTGTGAACTTCTTAGGAAAAAATTATCCTGAAAACTTGAAGCTTCCGTGAGGAGATATTTTGAAAGTTGACTTTTATTCTTCATTTTGATTTATTTGTCATCATTAGTCTTTTCATGCTAGTTGTAAGAATTATTTTTGTTGTTCATTGTTGAAGTGTCAAAGTGTGCTGCAAATTCAAGACCTTGTGTTTAAACAGAACTTAGATATCTTTGGTTGGAATTTGATGCAACTTACAGTGTCTACTGTCTTCTTTTTGCAATATCTGCCTCTTATGGAAATTTCTTGCTTCCAAAATGTCTCGTTCTCAGAGTTTTTTTGCTGACGTGTCCAAAAAATCTATTTTGCACTATTTGTTCTTTTGATCTGGAATGCATTTGATTGGCTGTAGTTTTTATATTAGTTGTTGAAAATATGTAATCTTTAAAATGTTGGTTAAGTGCTATTCTAGAAGGCAGTGACAAGAGTTCCTTGACTATGGATGCAGCGCGCAAAGATTTTACTGCTGGTGCTTCACCTGCTAAGCAAAAAAGTCGAACAGTTGAATTTTCTTCCCTAACATGGACTGAAAAATATAGGCCAAAGGTTTCAAACGACATTATAGGAAACCAGTCACTGGTATCTTTATTTCTTAATTTCTCCTTTGCTATTGTTGTTACGTATTATTTTTTCAGTTTTTGTGTGCTCATGTAAAATATTATGTCTTTGCAACTAAGATTTCGTTCATTTTACAATTGTAGGTCAAACAACTTCATGATTGGTTGGCACATTGGAACGAGAACTTTTTTGATGCTCAAAGCAAAAAGAAGGGTAAAAAGCTCAATGATTCCAGTGCTAAAAAAGCTGTCTTATTATGTGGAGGTCCTGGCATAGGTAAAACTACGTCGGCTAAGTTGGTTAGCCAGATGCTTGGATATCAGGCTATAGAGGTACTTCATTTGTTCTTAATGACATATGAGGAGCATTTTGAATTATTATTCTTGGTGCAATTTTCCTTATATGTGTGCACTGCATCTAGGTAAATGCCAGTGACAATCGGGGTAAATCAGATGCAAAAATTCAAAAGGGAATTAGTGGAAGCAATGCGAATTCCATAAAGGAGCTCATCAGCAATGAATCTCTGCATTTCAGAACGAATCAGTTAGTGTGCATTCCCTGAACTTATTGCATTAAGTTAATAACACTGGGTTGTGTTAGGTATTTGGAACCTACCAACTTTTCTGGTGGGTTAATAGTTAAGTTGAATTACAGGCCAAAACGTCCCAAAACTGTGTTGATTATGGATGAGGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTTGCTGATCTGATTGCGAGTATTAAAACCTCCAAAATTCCAATTATCTGCATCTGTAATGACCGTTACAGCCAGAAGCTGAAAAGCCTTGTGAACTACTGTCTGATTCTCAGCTTTAGAAAGCCTACAAAACAACAGGTTTTATATGGTTTATTACTTCACTATTACTGTCTTCTTCATGGGTGACATCCTGTGTTTGAATTAGACAATGACTCGCTTCAGCAATTTTCTGTTGTATTTTCCCCAGTTGCACCAAAATATTGTAATCATTCATGAGCAATAAAAGGTTCTTCTACTTTATCAAAGATAAATAAATAAATAAAAGGCTTTTCTCATGTTACAAAGACCTTTTTTATCTCCCCATGTTTGATGGGTAGGAAGGAGATGCCTCACCTCCTTCCCTCTGCATGTATATCTTTTGTTCTTTTGGGATGAATGGTCTCTTATCCTTAAAAGAAAAAGATTATATCGTCGCCTGTATAATATGCCCAGTTTTTAATCCTTTGCCTGTGCCCCTTCATATGCTCTTCATATGTTTTGATCGTTTGAAATTTATGATTTAAGCGCTTCCTTTGCTTTACATTCTTGGTCCAATACTGCAAAAATTTGATAGAAGTTAGTTTGACCCGTTCTAGATGGCAAAAAGATTCATGCAAGTTGCAAATGCAGAGGGCCTTCAAGTTAATGAGGTAAATATTTCGTATGTCACTTGATTATGGTTGCTCATTTAGTTGGAGTGGGTTGCATGCATGCTTGGTTATAGCATCTTGAATCTTGATAATCACTTGCCATAGATAACTGATCAGCTGGTGTTATGGTTTCAGATTGCTCTTGAGGAACTTGCGGAAAGAGTTAATGGGGATATGCGCATGGCACTAAATCAGTTGCAGTACATGAGTCTGTCAATGCCAGTTATTAAATATGATGATATTCGCCAACGACTTCTGAGCAGTATGAAAGATGAAGACATCTCACCATTCACTGCCGTTGATAAGTATGCACAATTTAATTTTAGTTCTACACCACTTCGTTACTTTGTTTTGCTGCCAAGCCTTTATGGCTGCTGTATTTGTTCTGTTCTTGGAGCAATATTGTGGAAGCAACTTGTTTTATTATATATTACTTTCTATATCTCCACATTTGAGCTGGTTGATGTTTTCTTATCTTATGCTTGTTTTTTCATAATCTTAAACCTATTCGACTCCCTTGCTTGCAGAAAAGCTGATACTGAGCTGTAATAAGTAAAAGTAAAAATATATATTGACGTTGTAGTTGTCAAGATCTAAGGATTATTTAGTACGAATTTATTTCTCTTCCTTGTGGGGCACCTTTCAATAGCAATAAGAAATTCTTTTGGTCTTTCCCTGTGGGGGCTATCTTTTGGTATGGTTGAAAAGAAATGAGAGGATTTTTCTTTGAGAAGCAGAATCTGTGTAGATAAATTTGGAGTTCAGTTATTTGCAGGCTCTCTTTGAATTGCAAATTCTCCTCTCTCAGTTTCTTTTTTTTTTCTTTTTTTTTTTTATTAACAAGAAACAAATTTCCGTTGATACTATGGCAACGAAATGATCAGGAAACGAGCTCCCAACGAACTCCCCCAGGGAGCTAGAAGAAGAAGGAAACAAAACGAGAACAAGATCAACAGCGATAAAAAGATATATAAAGAAAATAAAAAACAATGAGCCGACAAACTAAAGAATCTAGGGACAGTAGCACCAAGAAGCCACAAGGTTCAACCGAACAACCCAAAAGTGAAACTCCCCAATGAAAAAACACTCAACCACCAGAGCCACCCAATTGAAGGAGGAGCAACCCAAAAAACCACTACAATGCCCAAAGAAAAGGACCTTTAATCATGAGACAACCAAAAAAGAGAGTTCAAGGAATAGACTACCTGTCCCTGAGAGAGAACTCGATGCATTTACAGTTAATTGTTTATTTGACCCTTCACCTTCTACGGCTGGAAACACGAAGAAAACTCTTTTCCATTGCCTTTTTTTGGCGTAATTCTCCCCTTTTAGTTGGAAAGTCTTTTTTGATTCCATGGAAGCTTTTTTATATTTTTATCATCTTTTCAATGAAATATAGTTTCTTATCAAAAGAAAGAAAAATCATTTTTCTTGGATGTTATCATTTTCGATGCTTATTGATTTTATTTTTTGGTGACGTATTTACCGACGTCTTTTCATTTGCAGGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGACGAATGGGTAAATCTCAGCATGAGTGATCCTGATCTAGTCCCTCTTCTTATTCAGGTATCTTTATTTGGTTTAATTGATTCATGTATCAATTGTTCTATTTGTACTAAATCCAGAAAGAATTCTTGAATAAAATTTTAGACGTGAATAACATGATTTTTTAGGTTCATATATTTTTTAAGAAACTGTAGTTAAATATTTTACTTACTGCTAGTGCTAGTTAAAGAATCTTAGATCTTTGAAAGCCTTTTCTTTTTATTCTATGCTTGTAGATTGTGTTACTTTTTCTAGGTTTGAATTTTATTTAAGAGGCTGCATTATAATATTAATGCCCGAGTTCTATTTACATTTCCCAAGGGAAAGAAGGGAAAAACAAATACATAAGAATAGGAAAAGAAATCTCAAATGAATTTGTTTCTCTCTCTCCTTTTACAAAAACTGAAACATTTTGTTGGTATTAGGTGTACCATATGAAGAATTAAGTTAATGGTTATATTCAAATATGATTTATTATTTCCACTTCATTTTATACTTTATTCATACATTTAGTTTCTAAAACCTTTCATTCAGGCAGATCATTTAAGGGGAGGAATCTTTTGTGAAACCTGTGGCTCTGTCTGGGTTGATATTTTTCAATGAATAGTTTCTAAGCCTAAAGAAAAAGAAGAAAATCTAACATCTCCAAGGTCGTTGAGTGAGATTTTTAGCGGACTGGTTTGTGTATATCATTTATGAATTTGTTTTGCTATATTTACTTGTAACAACATCATTTAACACGTGTCTGTGACTCTAGACATTCATTTAACTGGTTAGTGGACCATTTAAGTATACAATGGACCGTTTCCATACTATTTTACTTCCACCCACGTGTTCTACATATCTTCAAATGAAAGATCTAAGCTTGTTAAAAGACTTGATAGTAGGCAAAAGGGAACTCATGTTTGCCATCTCTTCTACATACACATATGCATCACTCTGTTTATCCTTTTCTCGATTTTGTTATACATCACTTTCTAGCACTGTTTATAAGTTCACTGCCATACTTGTCTAGTTGCAGCCGAGTTTTTTGTCCAAAGCTAAAGCTAATAATAACTTAAATGGGAAGTTTTCTCTACATTTCCCATTGTACAGCCTTTATCTGAGCATGATAGTTGCTTGCAGGAAAATTATATTAATTATAGGCCAAGTTCTGTTAGTAAGGATGACAATGGGATCAAACGGATGGATTTGATTGCTCGTGCAGCTGAATCTATTGCAGATGGGGATATAATCAATGTACAGATTCGAAGGCATCGGCAGTGGCAACTCTCTCAAAGTAGTTCTATTGCTTCTTGTATAATCCCGTAAGTTTCTCAAATTCACCTTTGAGAATCTGATGCTTTTCTACACTAATGCTACCATTCATTATTGATTTTTATATAATTCTCCGTGATAGAGCTTCATTACTGCACGGGCAAAGAGAAACACTTGAACAGGTGTGAAATTCTGTACATGCAAGTTTTAAGGTTTTGATATCTTGTTTTGTTCTTTAAGTGATTTATGAGTTAGGATAAATGAGTAATTGCAAAAATTTTTGGAGGAATGAAAAAATAGCTATTGTCAGTGAGATGGTAGAGTTTGACTAGTAGGGTTTTTCTTCTATTTTTTGTTCATATTATGAGTGAATCATCAAACCATCTTAATGTATTTGATATGCATTATAATCTATTACCACCTGTGAGCAATGGTACTTTAATTGTATAGGTTCTTTGGAGGGGGTCTCCTCGACCCTCTGCCTCTAGGTTGTATGCCTTTTTTTTTTTGGGCTCCACGTCTTGATGAATGAATTCTCATTGTTTATTATCAAAAAAAAAAACAATGGTACTTTAATTTGGACAATGTGCTTACGTTCATCACTGTGTATTAGACGTTCTGACACTGGTTGGATATGTGTCAAGCTCTTGTTAAGTGATAAACATATAATGGACACTGATTCGTACATTCAATACATTTCCAACCATTGAATTTATCTTAGAGAGAGATGCATTCAATTTCCTTACTATTGAAAGAAACTTGTTATTATGCTCTTCTCTGTGTTGATTTTATGGCCTCAGATCGAACTGAAGTTCTCAATTATATTGGCAATAATTTGTTGTACTCCTGCATGTCTTTTTGCCTTTATCATATTTTAGCATGCGTTTCTTGTATTCTGTTGCAAATCTGTGTTGCTCTTAGGAACCGAATTTTATGTGCTTTTGGAGTAATGATGGTGAGCTGTGGGTTTTCCTTTATGTATTATAGATTATTGCGAGTGCAAGTTTTCAGGCTCATTTTCCCTCTATCTCTAATCCTCGGATATGGTACAATAATCCACTTCCAAGGGTATGTGTACCATAGTTGCATTTTAAATTATACTAAACTTCATTCGTGCATATTATGCAGGGAGAGCGTAATTTTAATAGATTTAGTGCATGGCTGGGAAAAAATTCGACATTTGGAAAAAATATGAGGCTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGTGAATCCTGTTCAGGGAGGTAAATTTTTATATGCTGCATTTCCTCTTTTGGTTGCTGCAGTATATTATACTTCCTGTATGAATACACTCCTTGTTGAAGTTGCAACGTTAGATACCTTCTCAATAATATATCTTCCACTTTCTTTTGAGGGATATGAATCATTTCATTAATAATAAAGATACAGAAAACCCCAAAGGGGCCGTCCAATTGGCAAGGGCTTGGGGTTTCTTGGTTAGAGGTCTCAAGTTCAAACCTTCTGGTGAGCTTAATACCAAAAATCCTTGATGTCTCCTGGGTCCGAGCCTTGTGGCAAGCGTGGGTGTCCCTGGGTATAGGAGAACAAAGTTCCAACTCCCGATTATCAAAATAATAATAATAATAATAATAATACAGAAAATGAAGGAAGATGTGGGTTAAAGAAAATTTTATCCAGTCAATATGTGGCCATACTCTCAAGGGATAACAAAGAAGCTATGGGTTAATGTGATTAAATCTATCCTTTGAAGCTGGGTTTATTTATATAATATCTTTTGCGACCATACTGTTTGATTTTACTTCTCATCACATCAATGGATAGTTTTTCTTGTTTCTGAAAAAAGGAAAAGGGATAAAAAAACAAAGAGGGAAGGATGAGGCATTTTATCACTCTCTGTTGTGAAAAGAGGTCACTTAGAATTTCATATGACTTCCTGTTCGGGGTTTGTATCTTTTGAACAATTTTTGTTCCTTTTCATTAAATCAATGAAAAGTTCGTTTCTTGTTAAAAAAAGAAAAATATGATCTCCTGTTGGCTCTCATTTTTGTGCTCTGTGGCAAAGCAAGGGTGCCATGGAGAAACCCTTCCAAAGGGATTTATTTGCAACTAAACTTCTGACATTCAAGCAATTGAAGAGTGTTTTGTAACTACTTTTGCTCTTAGGAGGTTTCCTATCCCTCTCCTTTCAATTCATTTTTTCTTACTACATATTGTTTCATTCTATTTTTTAACTTAAAAAAAAAATCTACTTTTCCAGTGGCGTAGTGATCAATTTAGACTTGTGCATTAGAATAAGATAGAGTAGGATATATATTGGCAAGAGAAGTTCCTAGATTTTGAATGTTGTGTAGGGTGCTTAACCCCACTCTTTCAGTTTCCACATGGTTGAGTGTGTCCATTAGTTGCAAACTATAATATTTCAATTCTAAATAATACAGACAACACCTACGAGTTGAGAACCTTACTCTATTTCTAAAGAGGTTGACTGAGCCACTGCACACTCTGCCGAAGGTTAGAATATATTTGGTTTGTTTGATTCTAGTTATAGGAACGGTAGTCTTTGAGGCATTATGGTTCAATTTATACTTTTTTCAAATGATATGATTACCAGGATGAAGCTGTTAAAATGGTTGTAGAATTAATGAGTCTATATTCAATTAGTCAAGAGGATTTTGATACTGTTGTGGAGTTGTCAAAATTTCAGGTACTGATCTACTTTTTCCTTAGTAATATCATGGTCACTACACTTGCTACTTTTATTTTTAAGCGTAGTTTTCTTATGGATGGTTCTTCGAGTCAGGGTCGTAAGAATCCGTTGGATGGTGTAGCCCCTGCTGTCAAAGCTGCTCTAACAAAGGCATACAAAGAAGTAAGCAAGACACACATGGTGCGGGCTGCAGATCTTATTACACTTACTGGAATTAAAAAGGCCCCCAAGAAGCGAATTGCAGCAATTCTAGAACCGGCTGAGGATACAATTGAGGGTGCTGGTGGAGACACATTGGCCGAAAGTGACGATGAGGACGCTTTGGACAACGAGGGCGCGGGTAAGATTTCATTTGTCTATTGTAGGTGCTCAACTGTTGGCAAGCCGGTTGTGCTTGTTGGGCGAGTTCCACTTCTTTAACTGAACTATTCTTTCTGGTTTGCAATTACAGAAGACTCCACAAACGGTGAGAAGCTGCAACTGGAACTTCAAAGCTTGAATAAGAAAGGTAGCTGATCTTTCATACTGATGGACTGCATTTATTCGTTCTTGAAATTAATATAGTTTTATATTTTGTTAGGAATGCAAGTGCAATTGGATTTGAAGGGCGTGGATAATTCAAGCGCCAAGAAATCCGGTGGCAGAGGAAAAGGTGGCCGTAGTAGTTCGCAGGCTTCAGAGAAGAAAGGAGGGGGGCGAGGGCGAGGTTCGGGATCTGCCACCAAGAGGAAAAGATAA

mRNA sequence

ATGGCGGATATTAGGAAATGGTTCATGAAAGCACACGACAAAGACAATGGCAGTGCGTTGAAGCATGCAAAGCCTGCTGCAAGCAATTCAGAGAAAGCTGCTACAGCCGAACCACAGTCCGGAAAAACAGGGCTGAGTGGTGGGGAAAGTACTGGCAGAAGGATAACTAGTAAGTACTTTGCCTCAGAAAAGCAGAAGTCCAAGGACGCAAAAGAAATAGAGGGACTCCCGATCAAAAGAAAGTCTCCACAGGATGCGAAGGAATCACCAGCCAAAAGAAAGTCTCAAAAAGATAGTGAGGAATCACCGAAAGCTCCACCTTCAAAAAAATTAAACAAAACTGATGACAACGACGATGATTTTGTTTTGTCTAGTTCTAGAAAGAACTTGTCTGACGTCACTCCCAACAAAAAGTTGAAGAGTGGTTCTGGAAAGGGAATTACTCAGAAACCTGTAGAGATTGAAGAAAGTGATGACGAGGAAGCTAAAGGTACCGAGTCTTCTCTGAAGCCTAGTGGAAGGGGTAGGGGGGCAAGGGGTTCATCTGCTGCAACTGTTAGTGGTAGAGGCAGAGGCGGTGGACGGGGTGGATTTATGAATTTTGGGGAAAGGAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCTGAAGGCGCTCCTGACTGTTTAGCTGGACTAACTTTTGTAATTAGTGGAACCCTTGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGACGCATAACTGGATCTATCAGCAAAAAAACAAATTATCTACTATGTGATGAAGATATTGGGGGTCGAAAATCTTCCAAAGCTAAAGAGCTGGGAACTGCTTTTCTCACTGAGGATGGCTTATTTGACATGATCCGTGCATCATCCGACACTAAAGCTCCTCCAAGACAAGAATCTAAAAAATCTGTTGTTAAGTCCTTGGAATCTCCAACAGAGAAAAACTCCCAAAAAGTACCAGCAGTACAAGCAAAGACGCGCAAAGATTTTACTGCTGGTGCTTCACCTGCTAAGCAAAAAAGTCGAACAGTTGAATTTTCTTCCCTAACATGGACTGAAAAATATAGGCCAAAGGTTTCAAACGACATTATAGGAAACCAGTCACTGGTCAAACAACTTCATGATTGGTTGGCACATTGGAACGAGAACTTTTTTGATGCTCAAAGCAAAAAGAAGGGTAAAAAGCTCAATGATTCCAGTGCTAAAAAAGCTGTCTTATTATGTGGAGGTCCTGGCATAGGTAAAACTACGTCGGCTAAGTTGGTTAGCCAGATGCTTGGATATCAGGCTATAGAGGTAAATGCCAGTGACAATCGGGGTAAATCAGATGCAAAAATTCAAAAGGGAATTAGTGGAAGCAATGCGAATTCCATAAAGGAGCTCATCAGCAATGAATCTCTGCATTTCAGAACGAATCAGCCAAAACGTCCCAAAACTGTGTTGATTATGGATGAGGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTTGCTGATCTGATTGCGAGTATTAAAACCTCCAAAATTCCAATTATCTGCATCTGTAATGACCGTTACAGCCAGAAGCTGAAAAGCCTTGTGAACTACTGTCTGATTCTCAGCTTTAGAAAGCCTACAAAACAACAGATGGCAAAAAGATTCATGCAAGTTGCAAATGCAGAGGGCCTTCAAGTTAATGAGATTGCTCTTGAGGAACTTGCGGAAAGAGTTAATGGGGATATGCGCATGGCACTAAATCAGTTGCAGTACATGAGTCTGTCAATGCCAGTTATTAAATATGATGATATTCGCCAACGACTTCTGAGCAGTATGAAAGATGAAGACATCTCACCATTCACTGCCGTTGATAAGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGACGAATGGGTAAATCTCAGCATGAGTGATCCTGATCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAATTATAGGCCAAGTTCTGTTAGTAAGGATGACAATGGGATCAAACGGATGGATTTGATTGCTCGTGCAGCTGAATCTATTGCAGATGGGGATATAATCAATGTACAGATTCGAAGGCATCGGCAGTGGCAACTCTCTCAAAGTAGTTCTATTGCTTCTTGTATAATCCCAGCTTCATTACTGCACGGGCAAAGAGAAACACTTGAACAGGGAGAGCGTAATTTTAATAGATTTAGTGCATGGCTGGGAAAAAATTCGACATTTGGAAAAAATATGAGGCTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGTGAATCCTGTTCAGGGAGACAACACCTACGAGTTGAGAACCTTACTCTATTTCTAAAGAGGTTGACTGAGCCACTGCACACTCTGCCGAAGGATGAAGCTGTTAAAATGGTTGTAGAATTAATGAGTCTATATTCAATTAGTCAAGAGGATTTTGATACTGTTGTGGAGTTGTCAAAATTTCAGGGTCGTAAGAATCCGTTGGATGGTGTAGCCCCTGCTGTCAAAGCTGCTCTAACAAAGGCATACAAAGAAGTAAGCAAGACACACATGGTGCGGGCTGCAGATCTTATTACACTTACTGGAATTAAAAAGGCCCCCAAGAAGCGAATTGCAGCAATTCTAGAACCGGCTGAGGATACAATTGAGGGTGCTGGTGGAGACACATTGGCCGAAAGTGACGATGAGGACGCTTTGGACAACGAGGGCGCGGAAGACTCCACAAACGGTGAGAAGCTGCAACTGGAACTTCAAAGCTTGAATAAGAAAGGAATGCAAGTGCAATTGGATTTGAAGGGCGTGGATAATTCAAGCGCCAAGAAATCCGGTGGCAGAGGAAAAGGTGGCCGTAGTAGTTCGCAGGCTTCAGAGAAGAAAGGAGGGGGGCGAGGGCGAGGTTCGGGATCTGCCACCAAGAGGAAAAGATAA

Coding sequence (CDS)

ATGGCGGATATTAGGAAATGGTTCATGAAAGCACACGACAAAGACAATGGCAGTGCGTTGAAGCATGCAAAGCCTGCTGCAAGCAATTCAGAGAAAGCTGCTACAGCCGAACCACAGTCCGGAAAAACAGGGCTGAGTGGTGGGGAAAGTACTGGCAGAAGGATAACTAGTAAGTACTTTGCCTCAGAAAAGCAGAAGTCCAAGGACGCAAAAGAAATAGAGGGACTCCCGATCAAAAGAAAGTCTCCACAGGATGCGAAGGAATCACCAGCCAAAAGAAAGTCTCAAAAAGATAGTGAGGAATCACCGAAAGCTCCACCTTCAAAAAAATTAAACAAAACTGATGACAACGACGATGATTTTGTTTTGTCTAGTTCTAGAAAGAACTTGTCTGACGTCACTCCCAACAAAAAGTTGAAGAGTGGTTCTGGAAAGGGAATTACTCAGAAACCTGTAGAGATTGAAGAAAGTGATGACGAGGAAGCTAAAGGTACCGAGTCTTCTCTGAAGCCTAGTGGAAGGGGTAGGGGGGCAAGGGGTTCATCTGCTGCAACTGTTAGTGGTAGAGGCAGAGGCGGTGGACGGGGTGGATTTATGAATTTTGGGGAAAGGAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCTGAAGGCGCTCCTGACTGTTTAGCTGGACTAACTTTTGTAATTAGTGGAACCCTTGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGACGCATAACTGGATCTATCAGCAAAAAAACAAATTATCTACTATGTGATGAAGATATTGGGGGTCGAAAATCTTCCAAAGCTAAAGAGCTGGGAACTGCTTTTCTCACTGAGGATGGCTTATTTGACATGATCCGTGCATCATCCGACACTAAAGCTCCTCCAAGACAAGAATCTAAAAAATCTGTTGTTAAGTCCTTGGAATCTCCAACAGAGAAAAACTCCCAAAAAGTACCAGCAGTACAAGCAAAGACGCGCAAAGATTTTACTGCTGGTGCTTCACCTGCTAAGCAAAAAAGTCGAACAGTTGAATTTTCTTCCCTAACATGGACTGAAAAATATAGGCCAAAGGTTTCAAACGACATTATAGGAAACCAGTCACTGGTCAAACAACTTCATGATTGGTTGGCACATTGGAACGAGAACTTTTTTGATGCTCAAAGCAAAAAGAAGGGTAAAAAGCTCAATGATTCCAGTGCTAAAAAAGCTGTCTTATTATGTGGAGGTCCTGGCATAGGTAAAACTACGTCGGCTAAGTTGGTTAGCCAGATGCTTGGATATCAGGCTATAGAGGTAAATGCCAGTGACAATCGGGGTAAATCAGATGCAAAAATTCAAAAGGGAATTAGTGGAAGCAATGCGAATTCCATAAAGGAGCTCATCAGCAATGAATCTCTGCATTTCAGAACGAATCAGCCAAAACGTCCCAAAACTGTGTTGATTATGGATGAGGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTTGCTGATCTGATTGCGAGTATTAAAACCTCCAAAATTCCAATTATCTGCATCTGTAATGACCGTTACAGCCAGAAGCTGAAAAGCCTTGTGAACTACTGTCTGATTCTCAGCTTTAGAAAGCCTACAAAACAACAGATGGCAAAAAGATTCATGCAAGTTGCAAATGCAGAGGGCCTTCAAGTTAATGAGATTGCTCTTGAGGAACTTGCGGAAAGAGTTAATGGGGATATGCGCATGGCACTAAATCAGTTGCAGTACATGAGTCTGTCAATGCCAGTTATTAAATATGATGATATTCGCCAACGACTTCTGAGCAGTATGAAAGATGAAGACATCTCACCATTCACTGCCGTTGATAAGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGACGAATGGGTAAATCTCAGCATGAGTGATCCTGATCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAATTATAGGCCAAGTTCTGTTAGTAAGGATGACAATGGGATCAAACGGATGGATTTGATTGCTCGTGCAGCTGAATCTATTGCAGATGGGGATATAATCAATGTACAGATTCGAAGGCATCGGCAGTGGCAACTCTCTCAAAGTAGTTCTATTGCTTCTTGTATAATCCCAGCTTCATTACTGCACGGGCAAAGAGAAACACTTGAACAGGGAGAGCGTAATTTTAATAGATTTAGTGCATGGCTGGGAAAAAATTCGACATTTGGAAAAAATATGAGGCTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGTGAATCCTGTTCAGGGAGACAACACCTACGAGTTGAGAACCTTACTCTATTTCTAAAGAGGTTGACTGAGCCACTGCACACTCTGCCGAAGGATGAAGCTGTTAAAATGGTTGTAGAATTAATGAGTCTATATTCAATTAGTCAAGAGGATTTTGATACTGTTGTGGAGTTGTCAAAATTTCAGGGTCGTAAGAATCCGTTGGATGGTGTAGCCCCTGCTGTCAAAGCTGCTCTAACAAAGGCATACAAAGAAGTAAGCAAGACACACATGGTGCGGGCTGCAGATCTTATTACACTTACTGGAATTAAAAAGGCCCCCAAGAAGCGAATTGCAGCAATTCTAGAACCGGCTGAGGATACAATTGAGGGTGCTGGTGGAGACACATTGGCCGAAAGTGACGATGAGGACGCTTTGGACAACGAGGGCGCGGAAGACTCCACAAACGGTGAGAAGCTGCAACTGGAACTTCAAAGCTTGAATAAGAAAGGAATGCAAGTGCAATTGGATTTGAAGGGCGTGGATAATTCAAGCGCCAAGAAATCCGGTGGCAGAGGAAAAGGTGGCCGTAGTAGTTCGCAGGCTTCAGAGAAGAAAGGAGGGGGGCGAGGGCGAGGTTCGGGATCTGCCACCAAGAGGAAAAGATAA

Protein sequence

MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYFASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDDFVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARGSSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSDTKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLTWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGGPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFRTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVIKYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYINYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAVKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDDEDALDNEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSSQASEKKGGGRGRGSGSATKRKR

Homology

[Close]

BLAST of Moc02g02130 vs. NCBI nr
Match: XP_022152987.1 (replication factor C subunit 1 [Momordica charantia])

HSP 1 Score: 1842.4 bits (4771), Expect = 0.0e+00
Identity = 980/980 (100.00%), Postives = 980/980 (100.00%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD 120
           ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD
Sbjct: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD 120

Query: 121 FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARG 180
           FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARG
Sbjct: 121 FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARG 180

Query: 181 SSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE 240
           SSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
Sbjct: 181 SSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE 240

Query: 241 EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSD 300
           EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSD
Sbjct: 241 EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSD 300

Query: 301 TKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLTW 360
           TKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLTW
Sbjct: 301 TKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLTW 360

Query: 361 TEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGGP 420
           TEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGGP
Sbjct: 361 TEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGGP 420

Query: 421 GIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFRT 480
           GIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFRT
Sbjct: 421 GIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFRT 480

Query: 481 NQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCL 540
           NQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCL
Sbjct: 481 NQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCL 540

Query: 541 ILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVI 600
           ILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVI
Sbjct: 541 ILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVI 600

Query: 601 KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYI 660
           KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYI
Sbjct: 601 KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYI 660

Query: 661 NYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASL 720
           NYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASL
Sbjct: 661 NYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASL 720

Query: 721 LHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENL 780
           LHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENL
Sbjct: 721 LHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENL 780

Query: 781 TLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAV 840
           TLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAV
Sbjct: 781 TLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAV 840

Query: 841 KAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDD 900
           KAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDD
Sbjct: 841 KAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDD 900

Query: 901 EDALDNEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSSQA 960
           EDALDNEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSSQA
Sbjct: 901 EDALDNEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSSQA 960

Query: 961 SEKKGGGRGRGSGSATKRKR 981
           SEKKGGGRGRGSGSATKRKR
Sbjct: 961 SEKKGGGRGRGSGSATKRKR 980

[Close]

BLAST of Moc02g02130 vs. NCBI nr
Match: XP_022957868.1 (replication factor C subunit 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1625.5 bits (4208), Expect = 0.0e+00
Identity = 881/983 (89.62%), Postives = 922/983 (93.79%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           MADIRKWFMKAHDKDNGSA KHAKP +S++EK+A AE QSGK  LSGG STGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKDNGSASKHAKPDSSSNEKSAAAELQSGKAELSGGGSTGRRITSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDN-DD 120
           ASEKQKSKD  E E LPIKRKSPQDAKESPAKRKSQKDS+ES K PP +KLNK DDN DD
Sbjct: 61  ASEKQKSKDTTETEELPIKRKSPQDAKESPAKRKSQKDSKESLKVPPLQKLNKIDDNDDD 120

Query: 121 DFVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLK-PSGRGRGA 180
           D V+SSSRKNLSDVTPNKKLKSGSGKGITQKPV+IEESDDEEA+GTESS K PSGRGRG 
Sbjct: 121 DAVISSSRKNLSDVTPNKKLKSGSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGG 180

Query: 181 RGSSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240
           RGSSAATV GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE
Sbjct: 181 RGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240

Query: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRAS 300
           REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFD+IRAS
Sbjct: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRAS 300

Query: 301 SDTKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSL 360
             TKAPPRQ+SKKSVVKS+ESPT K+S K   VQAKT KD +AGASPAKQK RTVEFSSL
Sbjct: 301 G-TKAPPRQDSKKSVVKSVESPTGKSSLK---VQAKTCKDLSAGASPAKQKRRTVEFSSL 360

Query: 361 TWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCG 420
           TWTEKY+PKV NDIIGNQSLVKQLHDWLAHWNENF D  SKKKGKKLNDS AKKA+LLCG
Sbjct: 361 TWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCG 420

Query: 421 GPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHF 480
           GPGIGKTTSAKLVSQMLGY+AIEVNASDNRGKSDAKIQKGISGSNAN+IKELISN SLHF
Sbjct: 421 GPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANTIKELISNSSLHF 480

Query: 481 RTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNY 540
           RT+QPKRPKTVLIMDEVDGMSAGDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNY
Sbjct: 481 RTDQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNY 540

Query: 541 CLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMP 600
           CLILSFRKPTKQQMAKR  QVANAEGLQVNEIALEELAERVNGD+RMALNQLQY+SLSM 
Sbjct: 541 CLILSFRKPTKQQMAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMS 600

Query: 601 VIKYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQEN 660
           VIKYDDIRQRLL SMKDEDISPFTAVDKLFGFNSGKLRMDE ++LSMSD DLVPLLIQEN
Sbjct: 601 VIKYDDIRQRLLGSMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQEN 660

Query: 661 YINYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPA 720
           YINYRPSSVSKDDNGIKRMDL+ARAAESIADGDIINVQIRRHRQWQLSQSSSIASC+IPA
Sbjct: 661 YINYRPSSVSKDDNGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPA 720

Query: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVE 780
           SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCS R+HLRVE
Sbjct: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVE 780

Query: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAP 840
           NLTLFLKRLTEPLHTLPKDEAVKMVV+ MSLYSI+QEDFDTV+ELSKFQGRKNPLDGVAP
Sbjct: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAP 840

Query: 841 AVKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAES 900
           AVKAALTKAYKE  KT MVR ADLITL GIKKAPKKRIAA+LEPAEDT+EG GGDTLAES
Sbjct: 841 AVKAALTKAYKEARKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAES 900

Query: 901 DDEDALDNEGAEDSTNGE-KLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSS 960
           DDE++LDN+ AEDSTN E KLQLELQ+L K+GM+VQLDLKGV+NS+AKK GGRG+GG   
Sbjct: 901 DDENSLDNDDAEDSTNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGG--G 960

Query: 961 SQASEKKGGGRGRGSGSATKRKR 981
           SQASEKKGG  GRGSGSATKRKR
Sbjct: 961 SQASEKKGG--GRGSGSATKRKR 975

[Close]

BLAST of Moc02g02130 vs. NCBI nr
Match: XP_022995017.1 (replication factor C subunit 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1624.0 bits (4204), Expect = 0.0e+00
Identity = 880/983 (89.52%), Postives = 920/983 (93.59%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           MADIRKWFMKAHDKDNGSA KHAKP +S +EK+A AE QSGK  LSGGESTGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKDNGSASKHAKPDSSTTEKSAAAELQSGKAELSGGESTGRRITSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDN-DD 120
           ASEKQKSKD  E E LPIKRKSPQDAKESPAKR+SQKDS+ES K PP +KLNK DDN DD
Sbjct: 61  ASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPPLQKLNKIDDNDDD 120

Query: 121 DFVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLK-PSGRGRGA 180
           D V+SSSRKNLSDVTPNKKLKSGSGKGITQKPV+IEESDDEEA+GTESS K PSGRGRG 
Sbjct: 121 DAVISSSRKNLSDVTPNKKLKSGSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGG 180

Query: 181 RGSSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240
           RGSSAATV GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE
Sbjct: 181 RGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240

Query: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRAS 300
           REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFD+IRAS
Sbjct: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRAS 300

Query: 301 SDTKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSL 360
             TKAPPRQ+SKKSVVKS+ESPT K+S K   VQAKT KD +AGASPAKQK RTVEFSSL
Sbjct: 301 G-TKAPPRQDSKKSVVKSVESPTGKSSLK---VQAKTCKDLSAGASPAKQKRRTVEFSSL 360

Query: 361 TWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCG 420
           TWTEKY+PKV NDIIGNQSLVKQLHDWLAHWNENF D  SKKKGKKLNDS AKKA+LLCG
Sbjct: 361 TWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCG 420

Query: 421 GPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHF 480
           GPGIGKTTSAKLVSQMLGY+AIEVNASDNRGKSDAKIQKGISGSNANSIKELISN SLHF
Sbjct: 421 GPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNSSLHF 480

Query: 481 RTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNY 540
           RT+QPK PKTVLIMDEVDGMSAGDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNY
Sbjct: 481 RTDQPKHPKTVLIMDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNY 540

Query: 541 CLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMP 600
           CLILSFRKPTKQQMAKR  QVANAEGLQVNEIALEELAERVNGD+RMALNQLQY+SLSM 
Sbjct: 541 CLILSFRKPTKQQMAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMS 600

Query: 601 VIKYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQEN 660
           VIKYDDIRQRLL SMKDEDISPFTAVDKLFGFNSGKLRMDE +++SMSD DLVPLLIQEN
Sbjct: 601 VIKYDDIRQRLLGSMKDEDISPFTAVDKLFGFNSGKLRMDERIDISMSDMDLVPLLIQEN 660

Query: 661 YINYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPA 720
           YINYRPSSVSKDDNGIKRMDL+ARAAESIADGDIINVQIRRHRQWQLSQSSSIASC+IPA
Sbjct: 661 YINYRPSSVSKDDNGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPA 720

Query: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVE 780
           SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCS R+HLRVE
Sbjct: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVE 780

Query: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAP 840
           NLTLFLKRLTEPLHTLPKDEAVKMVV+ MSLYSISQEDFDT +ELSKFQGRKNPLDGVAP
Sbjct: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVDFMSLYSISQEDFDTFMELSKFQGRKNPLDGVAP 840

Query: 841 AVKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAES 900
           AVKAALTKAYKE  KT MVR ADLITL GIKKAPKKRIAA+LEPAEDTIEG GGDTLAES
Sbjct: 841 AVKAALTKAYKEARKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTIEGTGGDTLAES 900

Query: 901 DDEDALDNEGAEDSTN-GEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSS 960
           DDE++LDN+ AEDSTN G+KLQLELQ+L K+GM+VQLDLKGV+NS+AKK GGRG+GG   
Sbjct: 901 DDENSLDNDYAEDSTNAGKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGG--G 960

Query: 961 SQASEKKGGGRGRGSGSATKRKR 981
           SQ SEKKGG  GRGSGSATKRKR
Sbjct: 961 SQTSEKKGG--GRGSGSATKRKR 975

[Close]

BLAST of Moc02g02130 vs. NCBI nr
Match: XP_023532343.1 (replication factor C subunit 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1622.8 bits (4201), Expect = 0.0e+00
Identity = 879/984 (89.33%), Postives = 920/984 (93.50%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           MADIRKWFMKAHDKDNGSA KHAKP +S++EK+A AE QSGK  LSGGESTGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKDNGSASKHAKPDSSSNEKSAAAELQSGKAELSGGESTGRRITSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD 120
           ASEKQKSKD  E E LPIKRKSPQDAKESPAKR+SQKDS+ES K PP +KLNK DDNDDD
Sbjct: 61  ASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPPLQKLNKIDDNDDD 120

Query: 121 FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLK-PSGRGRGAR 180
            V+SSSRKNLSDVTPNKKLKSGSGKGITQKPV+IEESDDEEA+GTESS K PSGRGRG R
Sbjct: 121 AVISSSRKNLSDVTPNKKLKSGSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGR 180

Query: 181 GSSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240
           GSSAATV GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER
Sbjct: 181 GSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240

Query: 241 EEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASS 300
           EEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFD+IRAS 
Sbjct: 241 EEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASG 300

Query: 301 DTKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFT--AGASPAKQKSRTVEFSS 360
            TKAPPRQ+SKKSVVKS+ESPT K+S K   VQAKT KD +  AGASPAKQK RTVEFSS
Sbjct: 301 -TKAPPRQDSKKSVVKSVESPTGKSSLK---VQAKTCKDLSAGAGASPAKQKRRTVEFSS 360

Query: 361 LTWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLC 420
           LTWTEKY+PKV NDIIGNQSLVKQLHDWLAHWNENF D  SKKKGKKLNDS AKKA+LLC
Sbjct: 361 LTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLC 420

Query: 421 GGPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLH 480
           GGPGIGKTTSAKLVS+MLGY+AIEVNASDNRGKSDAKIQKGISGSNAN+IKELISN SLH
Sbjct: 421 GGPGIGKTTSAKLVSRMLGYEAIEVNASDNRGKSDAKIQKGISGSNANTIKELISNSSLH 480

Query: 481 FRTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVN 540
           FRTNQPK PKTVLIMDEVDGMSAGDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVN
Sbjct: 481 FRTNQPKHPKTVLIMDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVN 540

Query: 541 YCLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSM 600
           YCLILSFRKPTKQQMAKR  QVANAEGLQVNEIALEELAERVNGD+RMALNQLQY+SLSM
Sbjct: 541 YCLILSFRKPTKQQMAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSM 600

Query: 601 PVIKYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQE 660
            VIKYDDIRQRLL SMKDEDISPFTAVDKLFGFNSGKLRMDE ++LSMSD DLVPLLIQE
Sbjct: 601 SVIKYDDIRQRLLGSMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQE 660

Query: 661 NYINYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIP 720
           NYINYRPSSVSKDDNGIKRMDL+ARAAESIADGDIINVQIRRHRQWQLSQSSSIASC+IP
Sbjct: 661 NYINYRPSSVSKDDNGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIP 720

Query: 721 ASLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRV 780
           ASLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCS R+HLRV
Sbjct: 721 ASLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRV 780

Query: 781 ENLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVA 840
           ENLTLFLKRLTEPLHTLPKDEAVKMVV+ MSLYSISQEDFDTV+ELSKFQGRKNPLDGVA
Sbjct: 781 ENLTLFLKRLTEPLHTLPKDEAVKMVVDFMSLYSISQEDFDTVMELSKFQGRKNPLDGVA 840

Query: 841 PAVKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAE 900
           PAVKAALTKAYKE  KT MVR ADLITL GIKKAPKKRIAA+LEPAEDT+EG GGD LAE
Sbjct: 841 PAVKAALTKAYKEARKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDALAE 900

Query: 901 SDDEDALDNEGAEDSTNGE-KLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRS 960
           SDDE++LDN+  EDSTN E KLQLELQ+L K+GM+VQLDLKGV+NS+AKK GGRG+GG  
Sbjct: 901 SDDENSLDNDDTEDSTNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGG-- 960

Query: 961 SSQASEKKGGGRGRGSGSATKRKR 981
            SQASEKKGG  GRGSGSATKRKR
Sbjct: 961 GSQASEKKGG--GRGSGSATKRKR 976

[Close]

BLAST of Moc02g02130 vs. NCBI nr
Match: XP_038901195.1 (replication factor C subunit 1 isoform X1 [Benincasa hispida] >XP_038901196.1 replication factor C subunit 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1620.1 bits (4194), Expect = 0.0e+00
Identity = 873/980 (89.08%), Postives = 909/980 (92.76%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           MADIRKWFMKAHDK+NGS  K AKPA SNSEK+ATAE QSGKTGLSGGESTGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKENGSGSKKAKPAPSNSEKSATAELQSGKTGLSGGESTGRRITSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD 120
           ASEKQK+ D KE E  PIKRKSPQD KESP KRK Q D+EESPKA P KK NK    DDD
Sbjct: 61  ASEKQKANDTKETEESPIKRKSPQDTKESPTKRKFQTDNEESPKALPLKKSNKI---DDD 120

Query: 121 FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARG 180
            V SSSRKN+S+VTPNKKLKSGSGKGI QK VEIE SDDEE KGT+SSLK SGRG+G RG
Sbjct: 121 AVFSSSRKNMSEVTPNKKLKSGSGKGIAQKSVEIEASDDEETKGTDSSLKSSGRGKGGRG 180

Query: 181 SSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE 240
           SSA TV GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGA +CLAGLTFVISGTLDSLERE
Sbjct: 181 SSATTVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGASECLAGLTFVISGTLDSLERE 240

Query: 241 EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSD 300
           EAEDLIKRHGGR+TGS+SKKTNYLLCDEDIGGRKSSKAKELGT FLTEDGLFDMIRAS  
Sbjct: 241 EAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG- 300

Query: 301 TKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLTW 360
            KAPP+Q  KKSVVKS+ESPTEKN QK   VQAK+RKD TAGASPAKQKSRT EFS+LTW
Sbjct: 301 KKAPPKQHPKKSVVKSMESPTEKNFQK---VQAKSRKDLTAGASPAKQKSRTAEFSNLTW 360

Query: 361 TEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGGP 420
           TEKYRPKV NDIIGNQSLVKQLHDWLAHWNENF D  SKKK KKLNDS AKKAVLLCGGP
Sbjct: 361 TEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKLNDSGAKKAVLLCGGP 420

Query: 421 GIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFRT 480
           GIGKTTSAKLVSQMLG++AIEVNASDNRGKSDAKI KGI GSNANSIKELISNESLHFR 
Sbjct: 421 GIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIHKGIGGSNANSIKELISNESLHFRM 480

Query: 481 NQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCL 540
           NQPK PKTVLIMDEVDGMSAGDRGGVADLIASIK SKIPIICICNDRYSQKLKSLVNYCL
Sbjct: 481 NQPKHPKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCL 540

Query: 541 ILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVI 600
           ILS+RKPTKQQMAKR +QVANAEGLQVNEIALEELAERVNGDMRMALNQLQY+SLSM VI
Sbjct: 541 ILSYRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVI 600

Query: 601 KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYI 660
           KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDE ++LSMSD DLVPLLIQENYI
Sbjct: 601 KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYI 660

Query: 661 NYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASL 720
           NYRPS++SKDDNGIKRMDLIAR AESIADGDIINVQIRRHRQWQLSQSS IASC+IPASL
Sbjct: 661 NYRPSAISKDDNGIKRMDLIARTAESIADGDIINVQIRRHRQWQLSQSSCIASCVIPASL 720

Query: 721 LHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENL 780
           LHGQRETLEQGERNFNRF AWLGKNST GKNMRLLEDLHVHILASRESCSGR+ LRVENL
Sbjct: 721 LHGQRETLEQGERNFNRFGAWLGKNSTSGKNMRLLEDLHVHILASRESCSGREQLRVENL 780

Query: 781 TLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAV 840
           TLFLKRLTEPLHTLPKDEAVK+VVE MSLYSISQEDFDTV+ELSKFQGRKNPLDGVAPAV
Sbjct: 781 TLFLKRLTEPLHTLPKDEAVKIVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAV 840

Query: 841 KAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDD 900
           KAALTKAYKEVSKTHMVRAADLITL G+KKAPKKRIAAILEP EDT+EGAGGDTLAESD+
Sbjct: 841 KAALTKAYKEVSKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGDTLAESDE 900

Query: 901 EDALDNEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSSQA 960
           E++LDNEGAEDS NGEKLQLELQSLNKKGMQVQLDLKG++NSSAKKSGGRG+GGR SSQA
Sbjct: 901 ENSLDNEGAEDSANGEKLQLELQSLNKKGMQVQLDLKGMENSSAKKSGGRGRGGR-SSQA 960

Query: 961 SEKKGGGRGRGSGSATKRKR 981
           SEKKGG  GRGSGSATKRKR
Sbjct: 961 SEKKGG--GRGSGSATKRKR 970

[Close]

BLAST of Moc02g02130 vs. ExPASy Swiss-Prot
Match: Q9C587 (Replication factor C subunit 1 OS=Arabidopsis thaliana OX=3702 GN=RFC1 PE=2 SV=1)

HSP 1 Score: 1162.9 bits (3007), Expect = 0.0e+00
Identity = 643/982 (65.48%), Postives = 765/982 (77.90%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           M+DIRKWFMKAH+K NGSA K     A   + AA   P   +      E+  RR TSKYF
Sbjct: 1   MSDIRKWFMKAHEKGNGSAPKSTSSKAGPVKNAAETAPIKSEQASEDLETADRRKTSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD 120
             +K K KD KE+E +             PAKRK + +S++  K  P K     DD+DDD
Sbjct: 61  GKDKTKVKDEKEVEAI-------------PAKRKLKTESDDLVKPRPRKVTKVVDDDDDD 120

Query: 121 FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARG 180
           F +  SRK   D TP+KKLKSGSG+GI  K V+ ++ DD E K  E+ LK +GRGRG R 
Sbjct: 121 FDVPISRKT-RDTTPSKKLKSGSGRGIASKTVDNDDDDDGEDK--ETPLKSAGRGRGGRA 180

Query: 181 SSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE 240
           +  A+  GRGRGGGRGGFMNFGERKDPPHKGEKEVPEG PDCLAGLTFVISGTLDSLERE
Sbjct: 181 APGASTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGTPDCLAGLTFVISGTLDSLERE 240

Query: 241 EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSD 300
           EAEDLIKRHGGRITGS+SKKT YLLCDEDIGGRKS KAKELGT FLTEDGLFD+IR+S  
Sbjct: 241 EAEDLIKRHGGRITGSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDIIRSSKP 300

Query: 301 TKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLTW 360
            K    + S K   K + +P + + QK         K       PAK K++ +E +SL W
Sbjct: 301 VKKSLPERSNKGTEK-ICAPPKTSPQKEETRGKPLAKSSPKKVPPAKGKNKIIE-TSLPW 360

Query: 361 TEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGGP 420
           TEKYRPKV N+I+GNQSLV QLH+WL+HW++ F    SK KGKKLND+ +KKAVLL G P
Sbjct: 361 TEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKKAVLLSGTP 420

Query: 421 GIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFRT 480
           GIGKTTSAKLVSQMLG+QA+EVNASD+RGK+++ I KGI GSNANS+KEL++NE++    
Sbjct: 421 GIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANSVKELVNNEAMAANF 480

Query: 481 NQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCL 540
           ++ K PKTVLIMDEVDGMSAGDRGGVADLIASIK SKIPIICICNDRYSQKLKSLVNYCL
Sbjct: 481 DRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCL 540

Query: 541 ILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVI 600
            L++RKPTKQQMAKR M +A AEGL++NEIALEELAERVNGD+R+A+NQLQYMSLSM VI
Sbjct: 541 PLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYMSLSMSVI 600

Query: 601 KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYI 660
           KYDDIRQRLLSS KDEDISPFTAVDKLFG+N GKLRMDE ++LSMSDPDLVPLLIQENY+
Sbjct: 601 KYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYL 660

Query: 661 NYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASL 720
           NYRPS   KD+   KRMDL+ARAAESIADGDIINVQIRR+RQWQLSQS  +AS I+PASL
Sbjct: 661 NYRPS--GKDE--AKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASL 720

Query: 721 LHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENL 780
           LHG RE LEQGERNFNRF  WLGKNST GKN RL+EDLHVH+LASRES +GR+ LRV+ L
Sbjct: 721 LHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRETLRVDYL 780

Query: 781 TLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAV 840
            L L RLT PL TLPKDEAV  VV+ M+ YSISQEDFDT++EL KF+GR+NP++GV P V
Sbjct: 781 PLLLSRLTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTILELGKFKGRENPMEGVPPPV 840

Query: 841 KAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDD 900
           KAALTK Y E++KT MVR AD++ L G+KKAPKKRIAA+LEP  D++    G+ LA++++
Sbjct: 841 KAALTKKYNEMNKTRMVRVADMVQLPGVKKAPKKRIAAMLEPTVDSLRDEDGEPLADNEE 900

Query: 901 EDALD-NEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKG-GRSSS 960
            +  D  E +E++T+GEKL+  L++LN +G+QV+LDLKG  +S ++K+ G+G+G G+++ 
Sbjct: 901 GNGSDAEEDSEEATDGEKLESNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGRGKAAD 956

Query: 961 QASEKKGGGRGRGSGSATKRKR 981
            ++EKK  GRG G+    KRKR
Sbjct: 961 TSAEKKATGRGSGA----KRKR 956

[Close]

BLAST of Moc02g02130 vs. ExPASy Swiss-Prot
Match: Q2R2B4 (Replication factor C subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC1 PE=2 SV=2)

HSP 1 Score: 1029.6 bits (2661), Expect = 2.3e-299
Identity = 612/1035 (59.13%), Postives = 729/1035 (70.43%), Query Frame = 0


Query: 2    ADIRKWFMKAHDKDNGSALKHA-------KPAASNSEKAATAEPQSGKTGLSGGESTGRR 61
            +DIRKWFMKA DK NG A K A       KP  S  EK + A   +        + + RR
Sbjct: 3    SDIRKWFMKAQDK-NGGAAKPAGTTALAKKPVLSIPEKPSAAPSMAA----CDQDCSARR 62

Query: 62   ITSKYFASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDS---EESPKAPPSKKL 121
             TSKYFAS+ +K +D    +G                KRK QK S   E+  K  P+K++
Sbjct: 63   KTSKYFASKTEKEEDTSAGKG----------TGRGLPKRKLQKVSDELEDDMKPLPAKEV 122

Query: 122  NK--TDDNDDDFVLSSSRKNLSDVTPNKKLKSGS---GKGITQKPVEIEESDDEEAKGTE 181
            +K   DD+DDDFV  S RK      P+KKLK  S     G T    + E+  DE+AK T 
Sbjct: 123  HKEEEDDDDDDFVAPSKRKTPVKPPPSKKLKGASTAEAHGKTGLDDDNEDKMDEDAK-TP 182

Query: 182  SSLKPS------GRGRGARGSSAA---------------------------------TVS 241
            S    S      GRGRG RG+ AA                                    
Sbjct: 183  SKASGSGRGRGRGRGRGGRGAGAAHGKTIGLDDDGEEDKMDEDAKTPSKAAGRGRGGASG 242

Query: 242  GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIK 301
            GRGRGGG  GFMNFGERKDPPHKGEKEVPEGAPDCL GLTFVISGTLDSLEREEA DLIK
Sbjct: 243  GRGRGGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLTGLTFVISGTLDSLEREEATDLIK 302

Query: 302  RHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSDTKAP-PR 361
            R+GGR+TGSISKKTNYLL DED+GG KS+KAKELG  FLTEDGLFDMIR S   KA   +
Sbjct: 303  RYGGRVTGSISKKTNYLLADEDVGGVKSNKAKELGVPFLTEDGLFDMIRKSKPAKATVAK 362

Query: 362  QESKKSVVKSLESPTEKNSQKV---PAVQAKTRKDFT-----AGASPAKQKSRTVEFSSL 421
             +S K+  K  +SP + +  KV      Q  T K+ +       AS   QK   V+  SL
Sbjct: 363  HQSDKNSEKQQKSPMKSSPVKVERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRGSL 422

Query: 422  TWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCG 481
             WTEKYRPKV NDI+GNQS+VKQLHDWL  W + F  +  K KGKK  DS AKKAVLL G
Sbjct: 423  QWTEKYRPKVPNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGKGKKQADSGAKKAVLLSG 482

Query: 482  GPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHF 541
             PGIGKTT+AK+VSQMLG QAIEVNASD+RGK+D+KI+KG+ GS +NSIKELISN +L++
Sbjct: 483  PPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNATLNY 542

Query: 542  RTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNY 601
              N+ KRPK VL+MDEVDGMSAGDRGGVADLIASIK SKIPIICICNDRYSQKLKSLVNY
Sbjct: 543  SNNRLKRPKAVLVMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNY 602

Query: 602  CLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMP 661
            CL+L+FRKPTKQQM KR M++A  EGLQ  E A+EELAERV+GD+RMALN LQYMSLS  
Sbjct: 603  CLLLNFRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSLSQS 662

Query: 662  VIKYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQEN 721
            V+KYDDIRQRL SS KDEDISPFTAVDKLFGFN G+LRMDE ++LSMSDPDLVPL+IQEN
Sbjct: 663  VVKYDDIRQRLNSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLIIQEN 722

Query: 722  YINYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPA 781
            YINYRP +V KDD+G+KRM+ +ARAAESIAD DI+NVQIRR+RQWQLSQ++ ++S I+PA
Sbjct: 723  YINYRPITVGKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQLSQAACLSSSIVPA 782

Query: 782  SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVE 841
            +L+HG RE LE GERNFNRF  WLGK ST  KN+RLLED H HILAS+++   R+ LR++
Sbjct: 783  ALMHGNREILEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILASQQANLDRESLRLD 842

Query: 842  NLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAP 901
             LTL L++LT+PL T+PKDEAV+ VVE M  YS+SQEDFDT+VELSKF+G  NP+DG+ P
Sbjct: 843  YLTLLLRQLTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDGIQP 902

Query: 902  AVKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAES 961
            AVK+ALTKAYK+ S + +VRAADL+ + G+KK  KKR+AAILEP  +++    G   +E 
Sbjct: 903  AVKSALTKAYKQGSSSRVVRAADLVNIPGMKKPLKKRVAAILEPVGESLPEENGVASSEG 962

Query: 962  DDEDALDNEGAEDSTNGE-KLQLELQSLNKKGMQVQLDLKGVDN--SSAKKSGGRGKGGR 971
            D+ED+ D E  ++   G+ K +L+LQS  KKG+QVQLDLK   N  +S K   GR K   
Sbjct: 963  DEEDSSDAENNDELVPGDTKPKLDLQSDKKKGIQVQLDLKSNGNGLNSKKMPAGRSKASG 1021

[Close]

BLAST of Moc02g02130 vs. ExPASy Swiss-Prot
Match: P35601 (Replication factor C subunit 1 OS=Mus musculus OX=10090 GN=Rfc1 PE=1 SV=2)

HSP 1 Score: 360.1 bits (923), Expect = 7.7e-98
Identity = 272/856 (31.78%), Postives = 428/856 (50.00%), Query Frame = 0


Query: 48   GESTGRRITSKYFASEKQKSKDAKEIEGLPIKRKSP---------QDAKESPAKRKSQKD 107
            GE +   +      +EKQKS +  E+     K  SP         +DAK+ P K   +K+
Sbjct: 247  GEESFSSVQDDLSKAEKQKSPNKAELFSTARKTYSPAKHGKGRASEDAKQ-PCKSAHRKE 306

Query: 108  SEESPKAPPSKKLNKTDDND--DDFVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEE 167
            +  SPKA     L K  +    ++  L ++R+  S   P        G+  T K  ++  
Sbjct: 307  ACSSPKASAKLALMKAKEESSYNETELLAARRKESATEP-------KGEKTTPKKTKVSP 366

Query: 168  SDDEEAKGTESSLKPSGRGRGARGSSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVP 227
            +  E     +S  K +                         + ++  R+ P   G KE+P
Sbjct: 367  TKRESVSPEDSEKKRT---------------------NYQAYRSYLNREGPKALGSKEIP 426

Query: 228  EGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSS 287
            +GA +CL GLTFVI+G L+S+ER+EA+ LI+R+GG++TG++SKKTNYL+   D G  KS 
Sbjct: 427  KGAENCLEGLTFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSD 486

Query: 288  KAKELGTAFLTEDGLFDMIRA--------------------SSDTKAPPRQESKKSVVKS 347
            KA  LGT  L EDGL D+IR                     S   + P + +  K  +  
Sbjct: 487  KAAALGTKILDEDGLLDLIRTMPGKRSKYEMAAEAEMKKEKSKLERTPQKNDQGKRKISP 546

Query: 348  LESPTEKNSQKVPAVQAKTRKDFTAGASPAKQ----------KSRTVEFSSLTWTEKYRP 407
             +  +E    K+  ++    K     AS   +          +S   E   L W +KY+P
Sbjct: 547  AKKESESKKCKLTLLKNSPMKAVKKEASTCPRGLDVKETHGNRSSNKE-ECLLWVDKYKP 606

Query: 408  KVSNDII---GNQSLVKQLHDWLAHWNENFFDAQSKKKGKKL------NDSSAKKAVLLC 467
                +II   G+QS   +L  WL +W+++    + KK   K       +D S+ KA LL 
Sbjct: 607  ASLKNIIGQQGDQSCANKLLRWLRNWHKS--SPEEKKHAAKFGKLASKDDGSSFKAALLS 666

Query: 468  GGPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLH 527
            G PG+GKTT+A LV Q LGY  +E+NASD R K+  K     S +N  SIK   ++ +  
Sbjct: 667  GPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNN-TSIKGFYTSGAA- 726

Query: 528  FRTNQPKRPKTVLIMDEVDGMSAG-DRGGVADLIASIKTSKIPIICICNDRYSQKLKSLV 587
                     +  LIMDEVDGM+   DRGG+ +LI  IK +KIPIIC+CNDR   K++SLV
Sbjct: 727  ----PSVSARHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLV 786

Query: 588  NYCLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLS 647
            +YC  L F++P  +Q+    + +A  EGL++   A+ E+    N D+R  L+ L      
Sbjct: 787  HYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNLSMWCAQ 846

Query: 648  MPVIKYDDIRQRLLSSMKDEDISPFTAVDKLF--GFNSGKLRMDEWVNLSMSDPDLVPLL 707
               + YD  +     + KD  + PF    K+F  G  +  + + +  +L   D  + PL 
Sbjct: 847  SKALTYDQAKADSQRAKKDIRLGPFDVTRKVFAAGEETAHMSLMDKSDLFFHDYSIAPLF 906

Query: 708  IQENYINYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASC 767
            +QENY++ +P +   D    K + L++RAA+SI DGD+++ QIR  + W L  + +I + 
Sbjct: 907  VQENYLHVKPVAAGGDMK--KHLMLLSRAADSICDGDLVDNQIRSKQNWSLLPTQAIYAS 966

Query: 768  IIPASLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQH 827
            ++P  L+ G           F  F +WLGK+S+ GK+ R+++DL +H+  S  + S ++ 
Sbjct: 967  VLPGELMRGYM-------TQFPSFPSWLGKHSSTGKHDRIVQDLSLHM--SLRTYSSKRT 1026

Query: 828  LRVENLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLD 851
            + ++ L+     L  PL T    E  + V++LM  Y + +EDF+ ++E+S + G+ +   
Sbjct: 1027 VNMDYLSHIRDALVRPL-TSQGVEGAQHVIKLMDTYYLMKEDFENIMEVSSWGGKPSAFS 1052

[Close]

BLAST of Moc02g02130 vs. ExPASy Swiss-Prot
Match: P35251 (Replication factor C subunit 1 OS=Homo sapiens OX=9606 GN=RFC1 PE=1 SV=4)

HSP 1 Score: 355.5 bits (911), Expect = 1.9e-96
Identity = 297/933 (31.83%), Postives = 459/933 (49.20%), Query Frame = 0


Query: 32   KAATAEPQSGKTGLSGGESTGRRITSKYFASEKQKSKDAKEIEGLPIKRKSPQDAKESPA 91
            K A  + ++G+T  S   +  +    KY    K      +     P K+   + +KES  
Sbjct: 239  KKARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQ 298

Query: 92   KRKSQKD---SEESPKAPPSKKLNKTDDNDDDFVLSSSRKNLSDVTPNKKLKSGSGKGIT 151
              KS  D      SPKA     + K  +        SS K +  V   +K  +   KG T
Sbjct: 299  HSKSSADKIGEVSSPKASSKLAIMKRKE-------ESSYKEIEPVASKRKENAIKLKGET 358

Query: 152  QKPVEIEESDDEEAKGTESSLKPSGRGRGARGSSAATVSGRGRGGGRGGFMNFGERKDPP 211
            + P           K T+SS         A+  S +      +      + ++  R+ P 
Sbjct: 359  KTP-----------KKTKSS--------PAKKESVSPEDSEKKRTNYQAYRSYLNREGPK 418

Query: 212  HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSISKKTNYLLCDE 271
              G KE+P+GA +CL GL FVI+G L+S+ER+EA+ LI+R+GG++TG++SKKTNYL+   
Sbjct: 419  ALGSKEIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGR 478

Query: 272  DIGGRKSSKAKELGTAFLTEDGLFDMIRA------------------SSDTKAPPRQE-- 331
            D G  KS KA  LGT  + EDGL ++IR                    S  +  P++   
Sbjct: 479  DSGQSKSDKAAALGTKIIDEDGLLNLIRTMPGKKSKYEIAVETEMKKESKLERTPQKNVQ 538

Query: 332  -------SKKSVVKSLESPTEKNSQKVPAVQAKT-----RKDF-------TAGASPAK-- 391
                   SKK        PT K       ++ +T       DF       T+G S A+  
Sbjct: 539  GKRKISPSKKESESKKSRPTSKRDSLAKTIKKETDVFWKSLDFKEQVAEETSGDSKARNL 598

Query: 392  -QKSRTVEFSSLTWTEKYRPKVSNDII---GNQSLVKQLHDWLAHWNENFFDAQSKKKGK 451
               S   +  +L W +KY+P     II   G+QS   +L  WL +W ++   ++ KK   
Sbjct: 599  ADDSSENKVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQKS--SSEDKKHAA 658

Query: 452  KL------NDSSAKKAVLLCGGPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQK 511
            K       +D S+ KA LL G PG+GKTT+A LV Q LGY  +E+NASD R KS  K   
Sbjct: 659  KFGKFSGKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIV 718

Query: 512  GISGSNANSIKELISNESLHFRTNQPKRPKTVLIMDEVDGMSAG-DRGGVADLIASIKTS 571
              S +N  SIK   SN +           K  LIMDEVDGM+   DRGG+ +LI  IK +
Sbjct: 719  AESLNN-TSIKGFYSNGAA-----SSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHT 778

Query: 572  KIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELA 631
            KIPIIC+CNDR   K++SLV+YC  L F++P  +Q+    M +A  EGL++   A+ E+ 
Sbjct: 779  KIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEII 838

Query: 632  ERVNGDMRMALNQLQYMSLSMPVIKYDDIRQRLLSSMKDEDISPFTAVDKLF--GFNSGK 691
               N D+R  L+ L         + YD  +     + KD  + PF    K+F  G  +  
Sbjct: 839  LGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVARKVFAAGEETAH 898

Query: 692  LRMDEWVNLSMSDPDLVPLLIQENYINYRPSSVSKDDNGIKRMDLIARAAESIADGDIIN 751
            + + +  +L   D  + PL +QENYI+ +P +   D    K + L++RAA+SI DGD+++
Sbjct: 899  MSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDMK--KHLMLLSRAADSICDGDLVD 958

Query: 752  VQIRRHRQWQLSQSSSIASCIIPASLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRL 811
             QIR  + W L  + +I + ++P  L+ G           F  F +WLGK+S+ GK+ R+
Sbjct: 959  SQIRSKQNWSLLPAQAIYASVLPGELMRGYM-------TQFPTFPSWLGKHSSTGKHDRI 1018

Query: 812  LEDLHVHILASRESCSGRQHLRVENLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQ 871
            ++DL +H+  S  + S ++ + ++ L+L    L +PL T    + V+ VV LM  Y + +
Sbjct: 1019 VQDLALHM--SLRTYSSKRTVNMDYLSLLRDALVQPL-TSQGVDGVQDVVALMDTYYLMK 1078

Query: 872  EDFDTVVELSKFQGRKNPLDGVAPAVKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKK 908
            EDF+ ++E+S + G+ +P   + P VKAA T+AY +  + H+       +L  IK +   
Sbjct: 1079 EDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNK--EAHLTP----YSLQAIKASRHS 1117

[Close]

BLAST of Moc02g02130 vs. ExPASy Swiss-Prot
Match: P35600 (Replication factor C subunit 1 OS=Drosophila melanogaster OX=7227 GN=Gnf1 PE=1 SV=2)

HSP 1 Score: 315.8 bits (808), Expect = 1.7e-84
Identity = 309/1032 (29.94%), Postives = 489/1032 (47.38%), Query Frame = 0


Query: 32  KAATAEPQSGKTGLSGGE--------STGRRITSKYFASEKQKSKDAKEIEGL------P 91
           KA +AE ++G+T     +        S    + S     +++ SK A   + +      P
Sbjct: 15  KAKSAEAENGETPSKAPKRRKAVIISSDEDEVVSPPETKKRKASKTASSEDDVVAATPEP 74

Query: 92  IKRKSPQDAKESPAKRKSQKDSEE----------SPKAPPSKKLNKTDDNDDDFVLS--S 151
           I +K+    K + +K K   D  E           PK P +K + + ++ D D  L    
Sbjct: 75  IAKKARNGQKPALSKLKRHVDPTELFGGETKRVIVPK-PKTKAVLEFENEDIDRSLMEVD 134

Query: 152 SRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPS--GRGRGARGSSA 211
             +++ +  P KK+ S +    + K  +    +  + K T+S        + + A    +
Sbjct: 135 LDESIKEAAPEKKVHSITRSSPSPKRAKNSSPEPPKPKSTKSKATTPRVKKEKPAADLES 194

Query: 212 ATVSGRGRGGGRGG----FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 271
           + ++   R   +      +  +  R    + G KE+P+G+PDCL+GLTFV++G L+S+ER
Sbjct: 195 SVLTDEERHERKRASAVLYQKYKNRSSCLNPGSKEIPKGSPDCLSGLTFVVTGVLESMER 254

Query: 272 EEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASS 331
           EEAE +IK +GG++   + KK  YL+  E+ G +K + A+EL    L+EDGLFD+IR  S
Sbjct: 255 EEAESVIKEYGGKVMTVVGKKLKYLVVGEEAGPKKLAVAEELNIPILSEDGLFDLIREKS 314

Query: 332 --------DTKAPPRQES-----KKSVVKSLESPTEKNSQ-------------------- 391
                   + K+P ++ S     KK V  S  S  +K  +                    
Sbjct: 315 GIAKQVKEEKKSPKKEHSSEEKGKKEVKTSRRSSDKKEKEATKLKYGEKHDIAKHKVKEE 374

Query: 392 ------------KVPAVQAKTRKDFTA----GASPAKQKSRTVEFSSLTWTEKYRPKVSN 451
                        VPAV  K +K+ ++      SP     +T++   + W +K++P    
Sbjct: 375 HTSPKETKDKLNDVPAVTLKVKKEPSSQKEHPPSPRTADLKTLDVVGMAWVDKHKPTSIK 434

Query: 452 DIIGN---QSLVKQLHDWLAHWNENFFDAQSKKK----GKKLNDSSAKKAVLLCGGPGIG 511
           +I+G     S V +L +WL+ W  N  D   K +      K +D S  KA LL G PGIG
Sbjct: 435 EIVGQAGAASNVTKLMNWLSKWYVN-HDGNKKPQRPNPWAKNDDGSFYKAALLSGPPGIG 494

Query: 512 KTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESL--HFR-T 571
           KTT+A LV + LG+ A+E NASD R K   K          + +  L+SN+SL  +F   
Sbjct: 495 KTTTATLVVKELGFDAVEFNASDTRSKRLLK----------DEVSTLLSNKSLSGYFTGQ 554

Query: 572 NQPKRPKTVLIMDEVDGMSAG-DRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYC 631
            Q    K VLIMDEVDGM+   DRGG+ +LIA IK S IPIIC+CNDR   K++SLVNYC
Sbjct: 555 GQAVSRKHVLIMDEVDGMAGNEDRGGMQELIALIKDSSIPIICMCNDRNHPKIRSLVNYC 614

Query: 632 LILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPV 691
             L F++P  +Q+  + M +   E ++++   +EE+    N D+R ++N +  +S     
Sbjct: 615 YDLRFQRPRLEQIKGKIMSICFKEKVKISPAKVEEIIAATNNDIRQSINHIALLSAK--- 674

Query: 692 IKYDDIRQRLLSSM--KDEDISPFTAVDKLFGFNSGK-LRMDEWVNLSMSDPDLVPLLIQ 751
              +D  Q+    +  KD  + P+  V K+F  +  K +   +  +L   D  L PL +Q
Sbjct: 675 ---EDASQKSGQQVATKDLKLGPWEVVRKVFTADEHKHMSFADKSDLFFHDYSLAPLFVQ 734

Query: 752 ENYINYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCII 811
           +NY+   P    KD      +  +A  A++++ GD++  +IR +  W L  + +  S ++
Sbjct: 735 QNYLQVLPQGNKKD-----VLAKVAATADALSLGDLVEKRIRANSAWSLLPTQAFFSSVL 794

Query: 812 PASLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSG-RQHL 871
           P   + G       G+ N   F  WLGKNS  GK  RL ++LH H   +R   SG R  +
Sbjct: 795 PGEHMCGH----FTGQIN---FPGWLGKNSKSGKRARLAQELHDH---TRVCTSGSRLSV 854

Query: 872 RVENLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDG 931
           R++     L  +  PL      E V   +++M  Y + +ED D++VEL+ + G+K+PLD 
Sbjct: 855 RLDYAPFLLDNIVRPL-AKDGQEGVPAALDVMKDYHLLREDLDSLVELTSWPGKKSPLDA 914

Query: 932 VAPAVKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAA---ILEPAEDTIEGAGG 965
           V   VKAALT++Y +      V A       GIKK   +   A    L+      +GAGG
Sbjct: 915 VDGRVKAALTRSYNK-----EVMAYSYSAQAGIKKKKSEAAGADDDYLDEGPGEEDGAGG 974

[Close]

BLAST of Moc02g02130 vs. ExPASy TrEMBL
Match: A0A6J1DHR4 (Replication factor C subunit 1 OS=Momordica charantia OX=3673 GN=LOC111020593 PE=3 SV=1)

HSP 1 Score: 1842.4 bits (4771), Expect = 0.0e+00
Identity = 980/980 (100.00%), Postives = 980/980 (100.00%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD 120
           ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD
Sbjct: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD 120

Query: 121 FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARG 180
           FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARG
Sbjct: 121 FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARG 180

Query: 181 SSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE 240
           SSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
Sbjct: 181 SSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE 240

Query: 241 EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSD 300
           EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSD
Sbjct: 241 EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSD 300

Query: 301 TKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLTW 360
           TKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLTW
Sbjct: 301 TKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLTW 360

Query: 361 TEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGGP 420
           TEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGGP
Sbjct: 361 TEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGGP 420

Query: 421 GIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFRT 480
           GIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFRT
Sbjct: 421 GIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFRT 480

Query: 481 NQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCL 540
           NQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCL
Sbjct: 481 NQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCL 540

Query: 541 ILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVI 600
           ILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVI
Sbjct: 541 ILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVI 600

Query: 601 KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYI 660
           KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYI
Sbjct: 601 KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYI 660

Query: 661 NYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASL 720
           NYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASL
Sbjct: 661 NYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASL 720

Query: 721 LHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENL 780
           LHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENL
Sbjct: 721 LHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENL 780

Query: 781 TLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAV 840
           TLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAV
Sbjct: 781 TLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAV 840

Query: 841 KAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDD 900
           KAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDD
Sbjct: 841 KAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDD 900

Query: 901 EDALDNEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSSQA 960
           EDALDNEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSSQA
Sbjct: 901 EDALDNEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSSQA 960

Query: 961 SEKKGGGRGRGSGSATKRKR 981
           SEKKGGGRGRGSGSATKRKR
Sbjct: 961 SEKKGGGRGRGSGSATKRKR 980

[Close]

BLAST of Moc02g02130 vs. ExPASy TrEMBL
Match: A0A6J1H1H3 (Replication factor C subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111459280 PE=3 SV=1)

HSP 1 Score: 1625.5 bits (4208), Expect = 0.0e+00
Identity = 881/983 (89.62%), Postives = 922/983 (93.79%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           MADIRKWFMKAHDKDNGSA KHAKP +S++EK+A AE QSGK  LSGG STGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKDNGSASKHAKPDSSSNEKSAAAELQSGKAELSGGGSTGRRITSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDN-DD 120
           ASEKQKSKD  E E LPIKRKSPQDAKESPAKRKSQKDS+ES K PP +KLNK DDN DD
Sbjct: 61  ASEKQKSKDTTETEELPIKRKSPQDAKESPAKRKSQKDSKESLKVPPLQKLNKIDDNDDD 120

Query: 121 DFVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLK-PSGRGRGA 180
           D V+SSSRKNLSDVTPNKKLKSGSGKGITQKPV+IEESDDEEA+GTESS K PSGRGRG 
Sbjct: 121 DAVISSSRKNLSDVTPNKKLKSGSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGG 180

Query: 181 RGSSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240
           RGSSAATV GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE
Sbjct: 181 RGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240

Query: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRAS 300
           REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFD+IRAS
Sbjct: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRAS 300

Query: 301 SDTKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSL 360
             TKAPPRQ+SKKSVVKS+ESPT K+S K   VQAKT KD +AGASPAKQK RTVEFSSL
Sbjct: 301 G-TKAPPRQDSKKSVVKSVESPTGKSSLK---VQAKTCKDLSAGASPAKQKRRTVEFSSL 360

Query: 361 TWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCG 420
           TWTEKY+PKV NDIIGNQSLVKQLHDWLAHWNENF D  SKKKGKKLNDS AKKA+LLCG
Sbjct: 361 TWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCG 420

Query: 421 GPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHF 480
           GPGIGKTTSAKLVSQMLGY+AIEVNASDNRGKSDAKIQKGISGSNAN+IKELISN SLHF
Sbjct: 421 GPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANTIKELISNSSLHF 480

Query: 481 RTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNY 540
           RT+QPKRPKTVLIMDEVDGMSAGDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNY
Sbjct: 481 RTDQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNY 540

Query: 541 CLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMP 600
           CLILSFRKPTKQQMAKR  QVANAEGLQVNEIALEELAERVNGD+RMALNQLQY+SLSM 
Sbjct: 541 CLILSFRKPTKQQMAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMS 600

Query: 601 VIKYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQEN 660
           VIKYDDIRQRLL SMKDEDISPFTAVDKLFGFNSGKLRMDE ++LSMSD DLVPLLIQEN
Sbjct: 601 VIKYDDIRQRLLGSMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQEN 660

Query: 661 YINYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPA 720
           YINYRPSSVSKDDNGIKRMDL+ARAAESIADGDIINVQIRRHRQWQLSQSSSIASC+IPA
Sbjct: 661 YINYRPSSVSKDDNGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPA 720

Query: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVE 780
           SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCS R+HLRVE
Sbjct: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVE 780

Query: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAP 840
           NLTLFLKRLTEPLHTLPKDEAVKMVV+ MSLYSI+QEDFDTV+ELSKFQGRKNPLDGVAP
Sbjct: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAP 840

Query: 841 AVKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAES 900
           AVKAALTKAYKE  KT MVR ADLITL GIKKAPKKRIAA+LEPAEDT+EG GGDTLAES
Sbjct: 841 AVKAALTKAYKEARKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAES 900

Query: 901 DDEDALDNEGAEDSTNGE-KLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSS 960
           DDE++LDN+ AEDSTN E KLQLELQ+L K+GM+VQLDLKGV+NS+AKK GGRG+GG   
Sbjct: 901 DDENSLDNDDAEDSTNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGG--G 960

Query: 961 SQASEKKGGGRGRGSGSATKRKR 981
           SQASEKKGG  GRGSGSATKRKR
Sbjct: 961 SQASEKKGG--GRGSGSATKRKR 975

[Close]

BLAST of Moc02g02130 vs. ExPASy TrEMBL
Match: A0A6J1JXK0 (Replication factor C subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111490698 PE=3 SV=1)

HSP 1 Score: 1624.0 bits (4204), Expect = 0.0e+00
Identity = 880/983 (89.52%), Postives = 920/983 (93.59%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           MADIRKWFMKAHDKDNGSA KHAKP +S +EK+A AE QSGK  LSGGESTGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKDNGSASKHAKPDSSTTEKSAAAELQSGKAELSGGESTGRRITSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDN-DD 120
           ASEKQKSKD  E E LPIKRKSPQDAKESPAKR+SQKDS+ES K PP +KLNK DDN DD
Sbjct: 61  ASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPPLQKLNKIDDNDDD 120

Query: 121 DFVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLK-PSGRGRGA 180
           D V+SSSRKNLSDVTPNKKLKSGSGKGITQKPV+IEESDDEEA+GTESS K PSGRGRG 
Sbjct: 121 DAVISSSRKNLSDVTPNKKLKSGSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGG 180

Query: 181 RGSSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240
           RGSSAATV GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE
Sbjct: 181 RGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240

Query: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRAS 300
           REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFD+IRAS
Sbjct: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRAS 300

Query: 301 SDTKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSL 360
             TKAPPRQ+SKKSVVKS+ESPT K+S K   VQAKT KD +AGASPAKQK RTVEFSSL
Sbjct: 301 G-TKAPPRQDSKKSVVKSVESPTGKSSLK---VQAKTCKDLSAGASPAKQKRRTVEFSSL 360

Query: 361 TWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCG 420
           TWTEKY+PKV NDIIGNQSLVKQLHDWLAHWNENF D  SKKKGKKLNDS AKKA+LLCG
Sbjct: 361 TWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCG 420

Query: 421 GPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHF 480
           GPGIGKTTSAKLVSQMLGY+AIEVNASDNRGKSDAKIQKGISGSNANSIKELISN SLHF
Sbjct: 421 GPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNSSLHF 480

Query: 481 RTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNY 540
           RT+QPK PKTVLIMDEVDGMSAGDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNY
Sbjct: 481 RTDQPKHPKTVLIMDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNY 540

Query: 541 CLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMP 600
           CLILSFRKPTKQQMAKR  QVANAEGLQVNEIALEELAERVNGD+RMALNQLQY+SLSM 
Sbjct: 541 CLILSFRKPTKQQMAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMS 600

Query: 601 VIKYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQEN 660
           VIKYDDIRQRLL SMKDEDISPFTAVDKLFGFNSGKLRMDE +++SMSD DLVPLLIQEN
Sbjct: 601 VIKYDDIRQRLLGSMKDEDISPFTAVDKLFGFNSGKLRMDERIDISMSDMDLVPLLIQEN 660

Query: 661 YINYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPA 720
           YINYRPSSVSKDDNGIKRMDL+ARAAESIADGDIINVQIRRHRQWQLSQSSSIASC+IPA
Sbjct: 661 YINYRPSSVSKDDNGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPA 720

Query: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVE 780
           SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCS R+HLRVE
Sbjct: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVE 780

Query: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAP 840
           NLTLFLKRLTEPLHTLPKDEAVKMVV+ MSLYSISQEDFDT +ELSKFQGRKNPLDGVAP
Sbjct: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVDFMSLYSISQEDFDTFMELSKFQGRKNPLDGVAP 840

Query: 841 AVKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAES 900
           AVKAALTKAYKE  KT MVR ADLITL GIKKAPKKRIAA+LEPAEDTIEG GGDTLAES
Sbjct: 841 AVKAALTKAYKEARKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTIEGTGGDTLAES 900

Query: 901 DDEDALDNEGAEDSTN-GEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSS 960
           DDE++LDN+ AEDSTN G+KLQLELQ+L K+GM+VQLDLKGV+NS+AKK GGRG+GG   
Sbjct: 901 DDENSLDNDYAEDSTNAGKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGG--G 960

Query: 961 SQASEKKGGGRGRGSGSATKRKR 981
           SQ SEKKGG  GRGSGSATKRKR
Sbjct: 961 SQTSEKKGG--GRGSGSATKRKR 975

[Close]

BLAST of Moc02g02130 vs. ExPASy TrEMBL
Match: A0A6J1H397 (Replication factor C subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111459280 PE=3 SV=1)

HSP 1 Score: 1619.4 bits (4192), Expect = 0.0e+00
Identity = 880/983 (89.52%), Postives = 921/983 (93.69%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           MADIRKWFMKAHDKDNGSA KHAKP +S++EK+A AE QSGK  LSGG STGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKDNGSASKHAKPDSSSNEKSAAAELQSGKAELSGGGSTGRRITSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDN-DD 120
           ASEKQKSKD  E E LPIKRKSPQDAKESPAKRKSQKDS+ES K PP +KLNK DDN DD
Sbjct: 61  ASEKQKSKDTTETEELPIKRKSPQDAKESPAKRKSQKDSKESLKVPPLQKLNKIDDNDDD 120

Query: 121 DFVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLK-PSGRGRGA 180
           D V+SSSRKNLSDVTPNKKLKSGSGKGITQKPV+IEESDDEEA+GTESS K PSGRGRG 
Sbjct: 121 DAVISSSRKNLSDVTPNKKLKSGSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGG 180

Query: 181 RGSSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240
           RGSSAATV GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE
Sbjct: 181 RGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240

Query: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRAS 300
           REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFD+IRAS
Sbjct: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRAS 300

Query: 301 SDTKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSL 360
             TKAPPRQ+SKKSVVKS+ESPT K+S K   VQAKT KD +AGASPAKQK RTVEFSSL
Sbjct: 301 G-TKAPPRQDSKKSVVKSVESPTGKSSLK---VQAKTCKDLSAGASPAKQKRRTVEFSSL 360

Query: 361 TWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCG 420
           TWTEKY+PKV NDIIGNQSLVKQLHDWLAHWNENF D  SKKKGKKLNDS AKKA+LLCG
Sbjct: 361 TWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCG 420

Query: 421 GPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHF 480
           GPGIGKTTSAKLVSQMLGY+AIEVNASDNRGKSDAKIQKGISGSNAN+IKELISN SLHF
Sbjct: 421 GPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANTIKELISNSSLHF 480

Query: 481 RTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNY 540
           RT+QPKRPKTVLIMDEVDGMSAGDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNY
Sbjct: 481 RTDQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNY 540

Query: 541 CLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMP 600
           CLILSFRKPTKQQMAKR  QVANAEGLQVNEIALEELAERVNGD+RMALNQLQY+SLSM 
Sbjct: 541 CLILSFRKPTKQQMAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMS 600

Query: 601 VIKYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQEN 660
           VIKYDDIRQRLL SMKDEDISPFTAVDKLFGFNSGKLRMDE ++LSMSD DLVPLLIQEN
Sbjct: 601 VIKYDDIRQRLLGSMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQEN 660

Query: 661 YINYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPA 720
           YINYRPSSVSKDDNGIKRMDL+ARAAESIADGDIINVQIRRHRQWQLSQSSSIASC+IPA
Sbjct: 661 YINYRPSSVSKDDNGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPA 720

Query: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVE 780
           SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCS R+HLRVE
Sbjct: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVE 780

Query: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAP 840
           NLTLFLKRLTEPLHTLPKDEAVKMVV+ MSLYSI+QEDFDTV+ELSKFQGRKNPLDGVAP
Sbjct: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAP 840

Query: 841 AVKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAES 900
           AVKAALTKAYKE  KT MVR ADLITL GIKKAPKKRIAA+LEPAEDT+EG GGDTLAES
Sbjct: 841 AVKAALTKAYKEARKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAES 900

Query: 901 DDEDALDNEGAEDSTNGE-KLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSS 960
           DDE++LDN+ A DSTN E KLQLELQ+L K+GM+VQLDLKGV+NS+AKK GGRG+GG   
Sbjct: 901 DDENSLDNDDA-DSTNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGG--G 960

Query: 961 SQASEKKGGGRGRGSGSATKRKR 981
           SQASEKKGG  GRGSGSATKRKR
Sbjct: 961 SQASEKKGG--GRGSGSATKRKR 974

[Close]

BLAST of Moc02g02130 vs. ExPASy TrEMBL
Match: A0A6J1K6Q0 (Replication factor C subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111490698 PE=3 SV=1)

HSP 1 Score: 1619.0 bits (4191), Expect = 0.0e+00
Identity = 875/982 (89.10%), Postives = 917/982 (93.38%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           MADIRKWFMKAHDKDNGSA KHAKP +S +EK+A AE QSGK  LSGGESTGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKDNGSASKHAKPDSSTTEKSAAAELQSGKAELSGGESTGRRITSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDN-DD 120
           ASEKQKSKD  E E LPIKRKSPQDAKESPAKR+SQKDS+ES K PP +KLNK DDN DD
Sbjct: 61  ASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPPLQKLNKIDDNDDD 120

Query: 121 DFVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLK-PSGRGRGA 180
           D V+SSSRKNLSDVTPNKKLKSGSGKGITQKPV+IEESDDEEA+GTESS K PSGRGRG 
Sbjct: 121 DAVISSSRKNLSDVTPNKKLKSGSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGG 180

Query: 181 RGSSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240
           RGSSAATV GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE
Sbjct: 181 RGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE 240

Query: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRAS 300
           REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFD+IRAS
Sbjct: 241 REEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRAS 300

Query: 301 SDTKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSL 360
             TKAPPRQ+SKKSVVKS+ESPT K+S K   VQAKT KD +AGASPAKQK RTVEFSSL
Sbjct: 301 G-TKAPPRQDSKKSVVKSVESPTGKSSLK---VQAKTCKDLSAGASPAKQKRRTVEFSSL 360

Query: 361 TWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCG 420
           TWTEKY+PKV NDIIGNQSLVKQLHDWLAHWNENF D  SKKKGKKLNDS AKKA+LLCG
Sbjct: 361 TWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCG 420

Query: 421 GPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHF 480
           GPGIGKTTSAKLVSQMLGY+AIEVNASDNRGKSDAKIQKGISGSNANSIKELISN SLHF
Sbjct: 421 GPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNSSLHF 480

Query: 481 RTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNY 540
           RT+QPK PKTVLIMDEVDGMSAGDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNY
Sbjct: 481 RTDQPKHPKTVLIMDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNY 540

Query: 541 CLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMP 600
           CLILSFRKPTKQQMAKR  QVANAEGLQVNEIALEELAERVNGD+RMALNQLQY+SLSM 
Sbjct: 541 CLILSFRKPTKQQMAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMS 600

Query: 601 VIKYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQEN 660
           VIKYDDIRQRLL SMKDEDISPFTAVDKLFGFNSGKLRMDE +++SMSD DLVPLLIQEN
Sbjct: 601 VIKYDDIRQRLLGSMKDEDISPFTAVDKLFGFNSGKLRMDERIDISMSDMDLVPLLIQEN 660

Query: 661 YINYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPA 720
           YINYRPSSVSKDDNGIKRMDL+ARAAESIADGDIINVQIRRHRQWQLSQSSSIASC+IPA
Sbjct: 661 YINYRPSSVSKDDNGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPA 720

Query: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVE 780
           SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCS R+HLRVE
Sbjct: 721 SLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVE 780

Query: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAP 840
           NLTLFLKRLTEPLHTLPKDEAVKMVV+ MSLYSISQEDFDT +ELSKFQGRKNPLDGVAP
Sbjct: 781 NLTLFLKRLTEPLHTLPKDEAVKMVVDFMSLYSISQEDFDTFMELSKFQGRKNPLDGVAP 840

Query: 841 AVKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAES 900
           AVKAALTKAYKE  KT MVR ADLITL GIKKAPKKRIAA+LEPAEDTIEG GGDTLAES
Sbjct: 841 AVKAALTKAYKEARKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTIEGTGGDTLAES 900

Query: 901 DDEDALDNEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSS 960
           DDE++LDN+ A+ +  G+KLQLELQ+L K+GM+VQLDLKGV+NS+AKK GGRG+GG   S
Sbjct: 901 DDENSLDNDYADSTNAGKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGG--GS 960

Query: 961 QASEKKGGGRGRGSGSATKRKR 981
           Q SEKKGG  GRGSGSATKRKR
Sbjct: 961 QTSEKKGG--GRGSGSATKRKR 974

[Close]

BLAST of Moc02g02130 vs. TAIR 10
Match: AT5G22010.1 (replication factor C1 )

HSP 1 Score: 1162.9 bits (3007), Expect = 0.0e+00
Identity = 643/982 (65.48%), Postives = 765/982 (77.90%), Query Frame = 0


Query: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60
           M+DIRKWFMKAH+K NGSA K     A   + AA   P   +      E+  RR TSKYF
Sbjct: 1   MSDIRKWFMKAHEKGNGSAPKSTSSKAGPVKNAAETAPIKSEQASEDLETADRRKTSKYF 60

Query: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD 120
             +K K KD KE+E +             PAKRK + +S++  K  P K     DD+DDD
Sbjct: 61  GKDKTKVKDEKEVEAI-------------PAKRKLKTESDDLVKPRPRKVTKVVDDDDDD 120

Query: 121 FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARG 180
           F +  SRK   D TP+KKLKSGSG+GI  K V+ ++ DD E K  E+ LK +GRGRG R 
Sbjct: 121 FDVPISRKT-RDTTPSKKLKSGSGRGIASKTVDNDDDDDGEDK--ETPLKSAGRGRGGRA 180

Query: 181 SSAATVSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE 240
           +  A+  GRGRGGGRGGFMNFGERKDPPHKGEKEVPEG PDCLAGLTFVISGTLDSLERE
Sbjct: 181 APGASTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGTPDCLAGLTFVISGTLDSLERE 240

Query: 241 EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASSD 300
           EAEDLIKRHGGRITGS+SKKT YLLCDEDIGGRKS KAKELGT FLTEDGLFD+IR+S  
Sbjct: 241 EAEDLIKRHGGRITGSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDIIRSSKP 300

Query: 301 TKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLTW 360
            K    + S K   K + +P + + QK         K       PAK K++ +E +SL W
Sbjct: 301 VKKSLPERSNKGTEK-ICAPPKTSPQKEETRGKPLAKSSPKKVPPAKGKNKIIE-TSLPW 360

Query: 361 TEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGGP 420
           TEKYRPKV N+I+GNQSLV QLH+WL+HW++ F    SK KGKKLND+ +KKAVLL G P
Sbjct: 361 TEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKKAVLLSGTP 420

Query: 421 GIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFRT 480
           GIGKTTSAKLVSQMLG+QA+EVNASD+RGK+++ I KGI GSNANS+KEL++NE++    
Sbjct: 421 GIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANSVKELVNNEAMAANF 480

Query: 481 NQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCL 540
           ++ K PKTVLIMDEVDGMSAGDRGGVADLIASIK SKIPIICICNDRYSQKLKSLVNYCL
Sbjct: 481 DRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCL 540

Query: 541 ILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVI 600
            L++RKPTKQQMAKR M +A AEGL++NEIALEELAERVNGD+R+A+NQLQYMSLSM VI
Sbjct: 541 PLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYMSLSMSVI 600

Query: 601 KYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYI 660
           KYDDIRQRLLSS KDEDISPFTAVDKLFG+N GKLRMDE ++LSMSDPDLVPLLIQENY+
Sbjct: 601 KYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYL 660

Query: 661 NYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASL 720
           NYRPS   KD+   KRMDL+ARAAESIADGDIINVQIRR+RQWQLSQS  +AS I+PASL
Sbjct: 661 NYRPS--GKDE--AKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASL 720

Query: 721 LHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENL 780
           LHG RE LEQGERNFNRF  WLGKNST GKN RL+EDLHVH+LASRES +GR+ LRV+ L
Sbjct: 721 LHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRETLRVDYL 780

Query: 781 TLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAV 840
            L L RLT PL TLPKDEAV  VV+ M+ YSISQEDFDT++EL KF+GR+NP++GV P V
Sbjct: 781 PLLLSRLTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTILELGKFKGRENPMEGVPPPV 840

Query: 841 KAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDD 900
           KAALTK Y E++KT MVR AD++ L G+KKAPKKRIAA+LEP  D++    G+ LA++++
Sbjct: 841 KAALTKKYNEMNKTRMVRVADMVQLPGVKKAPKKRIAAMLEPTVDSLRDEDGEPLADNEE 900

Query: 901 EDALD-NEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKG-GRSSS 960
            +  D  E +E++T+GEKL+  L++LN +G+QV+LDLKG  +S ++K+ G+G+G G+++ 
Sbjct: 901 GNGSDAEEDSEEATDGEKLESNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGRGKAAD 956

Query: 961 QASEKKGGGRGRGSGSATKRKR 981
            ++EKK  GRG G+    KRKR
Sbjct: 961 TSAEKKATGRGSGA----KRKR 956

[Close]

BLAST of Moc02g02130 vs. TAIR 10
Match: AT1G04730.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 4.6e-21
Identity = 78/255 (30.59%), Postives = 118/255 (46.27%), Query Frame = 0


Query: 401 KGKKLNDSSAKKAVLLCGGPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGIS 460
           K  KL     +K +LLCG PG+GKTT A + ++  GY+ +E+NASD R  S  + +    
Sbjct: 327 KKSKLTGPPEQKILLLCGAPGLGKTTLAHIAAKHCGYRVVEINASDERSASAIETR---- 386

Query: 461 GSNANSIKELISNESLHFRTNQPKRPKTVLIMDEVDGMSAGDRGGVADLI---------- 520
                 I +++   S+        RPK  L++DE+DG + GD  G  D+I          
Sbjct: 387 ------ILDVVQMNSV----TADSRPK-CLVIDEIDG-ALGDGKGAVDVILKMVLAERKH 446

Query: 521 -------ASIKTS----------KIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMA 580
                   ++KTS            P+ICICND Y+  L+ L     +  F +PT  ++ 
Sbjct: 447 ATGKENVENVKTSSKKDRRTAPLSRPVICICNDLYAPALRPLRQIAKVHIFVQPTVSRVV 506

Query: 581 KRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVIKYDDIRQRLLSSM 629
            R   + N EG++    AL  LAE    D+R  LN LQ++      I   DI  +++   
Sbjct: 507 NRLKYICNMEGMKARSFALSALAEYTECDIRSCLNTLQFLYKKKETINVIDIGSQVV-GR 564

[Close]

BLAST of Moc02g02130 vs. TAIR 10
Match: AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 72.4 bits (176), Expect = 2.3e-12
Identity = 62/239 (25.94%), Postives = 111/239 (46.44%), Query Frame = 0


Query: 356 SSLTWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVL 415
           SS  W EKYRPK   D+   + +V+ L + L                     ++    +L
Sbjct: 7   SSQPWVEKYRPKQVKDVAHQEEVVRVLTNTL--------------------QTADCPHML 66

Query: 416 LCGGPGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKEL--ISN 475
             G PG GKTT+A  ++  L +  +E+NASD+RG +  +            IK+   ++ 
Sbjct: 67  FYGPPGTGKTTTALAIAHQL-FGVLELNASDDRGINVVR----------TKIKDFAAVAV 126

Query: 476 ESLHFRTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASI-KTSKIPIICICNDRYSQKL 535
            S H ++  P     ++I+DE D M+   +  +   + +  K ++   IC   +  S+ +
Sbjct: 127 GSNHRQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFIC---NYISRII 186

Query: 536 KSLVNYCLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQ 592
           + L + C    F+  +++ M+ R + + N EGL ++  AL  L+    GD+R A+  LQ
Sbjct: 187 EPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQ 211

[Close]

BLAST of Moc02g02130 vs. TAIR 10
Match: AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 68.9 bits (167), Expect = 2.5e-11
Identity = 62/245 (25.31%), Postives = 111/245 (45.31%), Query Frame = 0


Query: 356 SSLTWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVL 415
           SS  W EKYRPK   D+   + +V+ L + L                     ++    +L
Sbjct: 7   SSQPWVEKYRPKQVKDVAHQEEVVRVLTNTL--------------------QTADCPHML 66

Query: 416 LCGGPGIGKTTSAKLVSQML------GYQAIEVNASDNRGKSDAKIQKGISGSNANSIKE 475
             G PG GKTT+A  ++  L        + +E+NASD+RG +  +            IK+
Sbjct: 67  FYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVR----------TKIKD 126

Query: 476 L--ISNESLHFRTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASI-KTSKIPIICICND 535
              ++  S H ++  P     ++I+DE D M+   +  +   + +  K ++   IC   +
Sbjct: 127 FAAVAVGSNHRQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFIC---N 186

Query: 536 RYSQKLKSLVNYCLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMA 592
             S+ ++ L + C    F+  +++ M+ R + + N EGL ++  AL  L+    GD+R A
Sbjct: 187 YISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRA 218

[Close]

BLAST of Moc02g02130 vs. TAIR 10
Match: AT1G21690.3 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 68.9 bits (167), Expect = 2.5e-11
Identity = 62/245 (25.31%), Postives = 111/245 (45.31%), Query Frame = 0


Query: 356 SSLTWTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVL 415
           SS  W EKYRPK   D+   + +V+ L + L                     ++    +L
Sbjct: 7   SSQPWVEKYRPKQVKDVAHQEEVVRVLTNTL--------------------QTADCPHML 66

Query: 416 LCGGPGIGKTTSAKLVSQML------GYQAIEVNASDNRGKSDAKIQKGISGSNANSIKE 475
             G PG GKTT+A  ++  L        + +E+NASD+RG +  +            IK+
Sbjct: 67  FYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVR----------TKIKD 126

Query: 476 L--ISNESLHFRTNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASI-KTSKIPIICICND 535
              ++  S H ++  P     ++I+DE D M+   +  +   + +  K ++   IC   +
Sbjct: 127 FAAVAVGSNHRQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFIC---N 186

Query: 536 RYSQKLKSLVNYCLILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMA 592
             S+ ++ L + C    F+  +++ M+ R + + N EGL ++  AL  L+    GD+R A
Sbjct: 187 YISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRA 218

The following BLAST results are available for this feature:

BLAST of Moc02g02130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152987.1	0.0e+00	100.00	replication factor C subunit 1 [Momordica charantia]	[more]
XP_022957868.1	0.0e+00	89.62	replication factor C subunit 1 isoform X1 [Cucurbita moschata]	[more]
XP_022995017.1	0.0e+00	89.52	replication factor C subunit 1 isoform X1 [Cucurbita maxima]	[more]
XP_023532343.1	0.0e+00	89.33	replication factor C subunit 1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038901195.1	0.0e+00	89.08	replication factor C subunit 1 isoform X1 [Benincasa hispida] >XP_038901196.1 re...	[more]

BLAST of Moc02g02130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C587	0.0e+00	65.48	Replication factor C subunit 1 OS=Arabidopsis thaliana OX=3702 GN=RFC1 PE=2 SV=1	[more]
Q2R2B4	2.3e-299	59.13	Replication factor C subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC1 ...	[more]
P35601	7.7e-98	31.78	Replication factor C subunit 1 OS=Mus musculus OX=10090 GN=Rfc1 PE=1 SV=2	[more]
P35251	1.9e-96	31.83	Replication factor C subunit 1 OS=Homo sapiens OX=9606 GN=RFC1 PE=1 SV=4	[more]
P35600	1.7e-84	29.94	Replication factor C subunit 1 OS=Drosophila melanogaster OX=7227 GN=Gnf1 PE=1 S...	[more]

BLAST of Moc02g02130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHR4	0.0e+00	100.00	Replication factor C subunit 1 OS=Momordica charantia OX=3673 GN=LOC111020593 PE...	[more]
A0A6J1H1H3	0.0e+00	89.62	Replication factor C subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111459280 PE=...	[more]
A0A6J1JXK0	0.0e+00	89.52	Replication factor C subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111490698 PE=3 ...	[more]
A0A6J1H397	0.0e+00	89.52	Replication factor C subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111459280 PE=...	[more]
A0A6J1K6Q0	0.0e+00	89.10	Replication factor C subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111490698 PE=3 ...	[more]

BLAST of Moc02g02130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22010.1	0.0e+00	65.48	replication factor C1	[more]
AT1G04730.1	4.6e-21	30.59	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G21690.4	2.3e-12	25.94	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.1	2.5e-11	25.31	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.3	2.5e-11	25.31	ATPase family associated with various cellular activities (AAA)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001357	BRCT domain	SMART	SM00292	BRCT_7	coord: 220..298 e-value: 5.3E-15 score: 65.9
IPR001357	BRCT domain	PFAM	PF00533	BRCT	coord: 220..295 e-value: 2.2E-15 score: 56.8
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 218..296 score: 15.20354
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 410..548 e-value: 4.7E-9 score: 46.1
IPR013725	DNA replication factor RFC1, C-terminal	PFAM	PF08519	RFC1	coord: 687..849 e-value: 4.3E-42 score: 144.0
IPR012178	Replication factor C subunit 1	PIRSF	PIRSF036578	RFC1	coord: 1..950 e-value: 4.6E-251 score: 833.5
None	No IPR available	GENE3D	1.20.272.10		coord: 619..729 e-value: 1.1E-26 score: 94.8
None	No IPR available	GENE3D	1.10.8.60		coord: 547..617 e-value: 6.4E-17 score: 62.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 894..909
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 916..940
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 887..980
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR23389	CHROMOSOME TRANSMISSION FIDELITY FACTOR 18	coord: 23..948
None	No IPR available	PANTHER	PTHR23389:SF6	REPLICATION FACTOR C SUBUNIT 1	coord: 23..948
None	No IPR available	CDD	cd17752	BRCT_RFC1	coord: 218..296 e-value: 7.27275E-43 score: 148.13
None	No IPR available	CDD	cd00009	AAA	coord: 399..547 e-value: 1.99698E-13 score: 66.7859
None	No IPR available	CDD	cd18140	HLD_clamp_RFC	coord: 547..605 e-value: 8.59293E-14 score: 64.8577
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 414..526 e-value: 6.8E-11 score: 42.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 358..546 e-value: 1.7E-49 score: 170.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 358..607
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 195..297 e-value: 2.1E-30 score: 106.8
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 218..297
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 618..763

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g02130.1	Moc02g02130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity