Moc02g01470 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g01470
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Nuclear transcription factor Y subunit
Location	chr2: 1109111 .. 1112045 (+)
RNA-Seq Expression	Moc02g01470
Synteny	Moc02g01470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTGGAAGATCTCCAAGGTTTTTTTAATCTTAAGAATGATGCTTCACTTTTTTTTTTTTTCCCCCTTTAATTTCTTATTTTACTGCTTTTCTCATAGGGGGAGTGGTTCCCCTGTTTATCAAACACTGGTTCTGCATGCATGATCTGTTTATTCTAGTCGACTCCATTCTTTTATGGTATCTGACAGGCATCATTGTCCAGAAGGTATGCATTCAAAATCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTGGTAGTTATTCTGAACCTTGGTGGCGCAGTATTGGGTACAATCCTATCTCCCCGCCAGCAGCAGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCCGAATCTAATGAGGGTCAGTCGATGTCAAATGATGATTTGAATGAAGAAGACGATGATGATAACACAAAAGACTCACAAGGTATGGCCTTCAACAATAATGTAGACATGTTTGCTTGTGAATCTTATTATAGCTCTAAGCAAGGCACTTGGTGTTTTTAGCCTTTTTAGTTATGAGCTGAAAATATTATACATTATCTTGGAAGTTGAGGACAATATTAGCTTATTGGATTGTTAACAAATAACAAACATGTTATTATCAAACTCAGCTGCAAGTTATGGGCAAGAACAGCACAACACCCAGCGTGCTGTTTCAACTGCACCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTGGAACTTGTAGGCCACAATATAGTGAGTTTTTTTTTTTTTTTTTTGCTATAGTCTGGTTGATTTCTTTCTTACTGTAGAGACATCTTGATAGTATACTTGCTGACTCTTAGAGTCCAGTTTTTTAATATTGAATAACATTGGATTTTCATCCGATTTAAGATATTTCTGAATTTAGTGGGATTACTAGTATTTGTTATTTTTTGCAGGCGTGTGCATCAAATCCATATCAAGATCCTTATTATCCAGGACTGATGACTGCCTATGGGCATCAACCTTTGGTATGTAGTACAGGTTAAAATCATAAAAGATAAGGTGACAATTTGTATACATATATATTTTTCTGGTAACTTTTGCACCATAATCACAAATTTTTAAGGTATATATTTTAGCCCTGGTAACCTGGATGTGTACTTTTATTTTTTCTTTTTCTTTGCCTTTTCAATTAGTCAGGAACTTCATGATTGTTTCTTGTCCAGATTTTCACTTTCTCAAACCATCTTAGTAGAATAGCGTGCAAATATCTGGTGAACTAACTGAAATTTTCCAGTTTCTTGGAAGAGGCTGTAGCATGATTATTGTATTATCCTTGCCTGTAAATATATTTCTTGGCCACAATGAAAAGGTCTATCGTCTATGTAAAGGATATCTGAGATCATTGTGGAATGTTATCAATTTTTCCTGATAAGTAAGAGTTGATGTTGGCACCTGACAAGTACTTCTAATTGCAGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTCTGCCCCTTGAGGTGACACAGGAGCCAGTTTTTGTGAATGCCAAACAATACCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTCGAGAATAAACTGATAAAAGTTAGAAAGGTACAACTGCTATTCGAGTAATTGTCTGTCATGTACTACAGCTTGGCTCTTATCGATGTTAATGTGGCTGGGTATTTGGCTCTCTTGTTCATTGTACTCACAAGCTACCAACATCATTATTAATTGTATTTTATTTTTAATGAAGTTCATTCTTCATGTATACTGCAAATTTGATTGAGTACTTTTAAATTCTCTTACTGAGAAGTTTTTACTCAAACTGTTCGAACCCTTACATGTGTGTTAAGGGCTACTGAAAAATTATTTTGTCGTGCTGGACAGTGAAGTGGATGTACTCACATAGGCTTTGTTAAGAAATAGGTATAAGCTTTTTATCATTGGTTATTTTTCCTGGGAACATAACTTTATTTTCCTATTCGACTTCTTATCTTGGATGTTTAGGATATTGCTAATGGCATATAGATTATATTCCAGCTACTATCTAATAATCAGATTCAGTGCAAGTGGGAAGAAACCCAAGTTTACAAGCTTAACTTACTCTAGGGATCCTTGAGCGCTAAAATGAATGTTGTTAGTACAAACACGTATATGAATTACCAAGTCATTGTCTCAAGACCATAAAAGACTGATATAAAGATGAGTCAAAATTTGTCTTTCAAAATTTCCGGATTTCTTCTTCTTGTATATTGTTCTGCATAGTTAATTCATTACCCTTTGAGACACAAGGCTTGGCTAGCTTATATGGGCCAGGGTTTGATTTAAAAAATCAAATGCCATTTCGTTGTTGGTTCTGTATGTTTGATGAGTGATGATTGTTCACCCCCACCTCTTCTTTTTCACGTCAGAAACTAATGCAGGTAAATTTTTCTGAAGTATCTCTAATATTTAGCTTGTGTTCAATGTTTAACAGCCATATCTTCATGAGTCTCGTCACCAGCATGCCATGAGAAGGGCAAGGGGTAGTGGAGGACGTTTTGCCAAGAAGAGTGAAGTTAATTCTTCGTGCTCTACTATGAAGGATAAGGAATGTGGATCTGGTCAAGCTATCTCATCGCACTCAGCTAGTTCATCTGGTTCTGAAGCTGTGCCTCGTGTCTTGGCTGAAACCTGGAATTCCTCCAATGGTCAACAAGAAGCAAGGACGCAGTTGCATGAGACATATGAAGCTCGTACTTATGTAAATGGCAGTAGCCATTTTCAAAACTACAGTAGCTTCCAAGCTTCATCATATGCTTTACGTACTGGCGAGAGAGGTGAAGATGGAGACTGTTCGGGACAGCAACGAGGAAGTATCTCAGAAAATCAGGCGGCACAGAGGCGTCTTGCCATTAAGTGA

mRNA sequence

ATGGACTGGAAGATCTCCAAGGGGGAGTGGCATCATTGTCCAGAAGGTATGCATTCAAAATCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTGGTAGTTATTCTGAACCTTGGTGGCGCAGTATTGGGTACAATCCTATCTCCCCGCCAGCAGCAGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCCGAATCTAATGAGGGTCAGTCGATGTCAAATGATGATTTGAATGAAGAAGACGATGATGATAACACAAAAGACTCACAAGCTGCAAGTTATGGGCAAGAACAGCACAACACCCAGCGTGCTGTTTCAACTGCACCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTGGAACTTGTAGGCCACAATATAGCGTGTGCATCAAATCCATATCAAGATCCTTATTATCCAGGACTGATGACTGCCTATGGGCATCAACCTTTGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTCTGCCCCTTGAGGTGACACAGGAGCCAGTTTTTGTGAATGCCAAACAATACCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTCGAGAATAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAGTCTCGTCACCAGCATGCCATGAGAAGGGCAAGGGGTAGTGGAGGACGTTTTGCCAAGAAGAGTGAAGTTAATTCTTCGTGCTCTACTATGAAGGATAAGGAATGTGGATCTGGTCAAGCTATCTCATCGCACTCAGCTAGTTCATCTGGTTCTGAAGCTGTGCCTCGTGTCTTGGCTGAAACCTGGAATTCCTCCAATGGTCAACAAGAAGCAAGGACGCAGTTGCATGAGACATATGAAGCTCGTACTTATGTAAATGGCAGTAGCCATTTTCAAAACTACAGTAGCTTCCAAGCTTCATCATATGCTTTACGTACTGGCGAGAGAGGTGAAGATGGAGACTGTTCGGGACAGCAACGAGGAAGTATCTCAGAAAATCAGGCGGCACAGAGGCGTCTTGCCATTAAGTGA

Coding sequence (CDS)

ATGGACTGGAAGATCTCCAAGGGGGAGTGGCATCATTGTCCAGAAGGTATGCATTCAAAATCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTGGTAGTTATTCTGAACCTTGGTGGCGCAGTATTGGGTACAATCCTATCTCCCCGCCAGCAGCAGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCCGAATCTAATGAGGGTCAGTCGATGTCAAATGATGATTTGAATGAAGAAGACGATGATGATAACACAAAAGACTCACAAGCTGCAAGTTATGGGCAAGAACAGCACAACACCCAGCGTGCTGTTTCAACTGCACCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTGGAACTTGTAGGCCACAATATAGCGTGTGCATCAAATCCATATCAAGATCCTTATTATCCAGGACTGATGACTGCCTATGGGCATCAACCTTTGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTCTGCCCCTTGAGGTGACACAGGAGCCAGTTTTTGTGAATGCCAAACAATACCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTCGAGAATAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAGTCTCGTCACCAGCATGCCATGAGAAGGGCAAGGGGTAGTGGAGGACGTTTTGCCAAGAAGAGTGAAGTTAATTCTTCGTGCTCTACTATGAAGGATAAGGAATGTGGATCTGGTCAAGCTATCTCATCGCACTCAGCTAGTTCATCTGGTTCTGAAGCTGTGCCTCGTGTCTTGGCTGAAACCTGGAATTCCTCCAATGGTCAACAAGAAGCAAGGACGCAGTTGCATGAGACATATGAAGCTCGTACTTATGTAAATGGCAGTAGCCATTTTCAAAACTACAGTAGCTTCCAAGCTTCATCATATGCTTTACGTACTGGCGAGAGAGGTGAAGATGGAGACTGTTCGGGACAGCAACGAGGAAGTATCTCAGAAAATCAGGCGGCACAGAGGCGTCTTGCCATTAAGTGA

Protein sequence

MDWKISKGEWHHCPEGMHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASESNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQNYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK

Homology

[Close]

BLAST of Moc02g01470 vs. NCBI nr
Match: XP_022148721.1 (nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148722.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148723.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148724.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148725.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148726.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia])

HSP 1 Score: 668.3 bits (1723), Expect = 3.7e-188
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0


Query: 17  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 76
           MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 60

Query: 77  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 136
           SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV
Sbjct: 61  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 120

Query: 137 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 196
           GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 197 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 256
           GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD
Sbjct: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 240

Query: 257 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 316
           KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
Sbjct: 241 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 300

Query: 317 NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 344

[Close]

BLAST of Moc02g01470 vs. NCBI nr
Match: KAG6570399.1 (Nuclear transcription factor Y subunit A-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 581.6 bits (1498), Expect = 4.5e-162
Identity = 303/349 (86.82%), Postives = 320/349 (91.69%), Query Frame = 0


Query: 12  HCPEGMHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECT 71
           +C E M SK +SVNQLESEPPNMQQT SYSEPWWRSIGYN IS PAAGGN+SNSTSLEC 
Sbjct: 71  NCEEDMQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECP 130

Query: 72  NGASESNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPP 131
           NGASESN+G SMSNDDLNE+DDDD TKDS+A SYGQ Q+N+Q AVS APTVHGGCITQPP
Sbjct: 131 NGASESNDGPSMSNDDLNEDDDDDTTKDSRAVSYGQVQNNSQHAVSAAPTVHGGCITQPP 190

Query: 132 QLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVN 191
           QLELVGH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVN
Sbjct: 191 QLELVGHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 250

Query: 192 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSC 251
           AKQYQGILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS 
Sbjct: 251 AKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSS 310

Query: 252 STMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNG 311
           STMK+K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE YEAR+YVNG
Sbjct: 311 STMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNG 370

Query: 312 SSHFQNYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           S  F NYSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 371 SGQFHNYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 418

[Close]

BLAST of Moc02g01470 vs. NCBI nr
Match: KAG7010273.1 (Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 579.3 bits (1492), Expect = 2.3e-161
Identity = 302/344 (87.79%), Postives = 317/344 (92.15%), Query Frame = 0


Query: 17  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 76
           M SK +SVNQLESEPPNMQQT SYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60

Query: 77  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 136
           SN+G SMSNDDLNE+DDDD TKDS A SYGQ Q+N+Q AVS APTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 137 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 196
           GH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 197 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 256
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+
Sbjct: 181 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240

Query: 257 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 316
           K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE YEAR+YVNGS  F 
Sbjct: 241 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFH 300

Query: 317 NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           NYSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Moc02g01470 vs. NCBI nr
Match: XP_022944164.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 579.3 bits (1492), Expect = 2.3e-161
Identity = 301/343 (87.76%), Postives = 317/343 (92.42%), Query Frame = 0


Query: 18  HSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASES 77
           HSK +SVNQLESEPPNMQQT SYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASES
Sbjct: 20  HSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASES 79

Query: 78  NEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELVG 137
           N+G SMSNDDLNE+DDDD TKDS A SYGQ Q+N+Q AVS APTVHGGCITQPPQLELVG
Sbjct: 80  NDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVG 139

Query: 138 HNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 197
           H+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 140 HSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 199

Query: 198 ILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDK 257
           ILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+K
Sbjct: 200 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 259

Query: 258 ECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQN 317
           + GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE Y+AR+YVNGS  F N
Sbjct: 260 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 319

Query: 318 YSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           YSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 320 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 361

[Close]

BLAST of Moc02g01470 vs. NCBI nr
Match: XP_022944166.1 (nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata] >XP_022944167.1 nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 578.2 bits (1489), Expect = 5.0e-161
Identity = 301/344 (87.50%), Postives = 317/344 (92.15%), Query Frame = 0


Query: 17  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 76
           M SK +SVNQLESEPPNMQQT SYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 77  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 136
           SN+G SMSNDDLNE+DDDD TKDS A SYGQ Q+N+Q AVS APTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 137 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 196
           GH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 197 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 256
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+
Sbjct: 181 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240

Query: 257 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 316
           K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE Y+AR+YVNGS  F 
Sbjct: 241 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFH 300

Query: 317 NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           NYSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Moc02g01470 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.1e-57
Identity = 145/281 (51.60%), Postives = 183/281 (65.12%), Query Frame = 0


Query: 20  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 79
           +SK   + E E  N   +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SE
Sbjct: 2   QSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-SE 61

Query: 80  SNEGQSMSNDDLNEEDDDDNTKDSQAA-------SYGQEQHNTQRAVSTAPTVHGGCITQ 139
           SN+  S S D     ++D   KDSQAA       ++G E ++   ++     +H   + Q
Sbjct: 62  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIR---NMHDQPLVQ 121

Query: 140 PPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVF 199
           PP  ELVGH IAC  NPYQDPYY GLM AYGHQ LG+ P+LGMP  R ALPL++ QEPV+
Sbjct: 122 PP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVY 181

Query: 200 VNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS 259
           VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKKSEV +
Sbjct: 182 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA 241

Query: 260 -SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS 290
              +  +D+E GS       + +SSGSE V     ET NSS
Sbjct: 242 GEDAGGRDRERGS-------ATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Moc02g01470 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 8.9e-52
Identity = 156/350 (44.57%), Postives = 192/350 (54.86%), Query Frame = 0


Query: 15  EGMHSKSKS-VNQLESEPPNMQQTGSYS-EPWWR-SIGYNPISPPAAGGNVSNSTSLECT 74
           E MHSKS S  N+++SE      +   S  PW R +   N  S   AG   S S +L   
Sbjct: 4   EDMHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL--- 63

Query: 75  NGASESNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPP 134
             A ESN  +S SN D     +   T   Q+A    +++          ++H G    PP
Sbjct: 64  --ALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYSDKNQ--------ESLHHGITQPPP 123

Query: 135 QLELVGHNIACA-SNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFV 194
             +LVGH +  A SNPYQDPYY G+M AYGH PLG+ P+ GMPH+RM LP E+ QEPVFV
Sbjct: 124 HPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFV 183

Query: 195 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSS 254
           NAKQYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK+  N+ 
Sbjct: 184 NAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKT--NTE 243

Query: 255 CSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVN 314
            S  K +E  +G    S S+S+S          E W                       N
Sbjct: 244 ASKRKAEEKSNGHVTQSPSSSNSDQ-------GEAW-----------------------N 303

Query: 315 GSSHFQNYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           G          Q+S+Y     +R E+G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 304 GDYRTPQGDEMQSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

[Close]

BLAST of Moc02g01470 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-21
Identity = 65/151 (43.05%), Postives = 84/151 (55.63%), Query Frame = 0


Query: 146 PYQDPYYPGLMTAYGHQPLGYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRR 205
           PY DPYY  +     + P  YP      +GM    + L  +  +EPVFVNAKQY GILRR
Sbjct: 54  PYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRR 113

Query: 206 RQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDKECGS 265
           RQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF    + N      K++E   
Sbjct: 114 RQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGD---HKEEE--- 173

Query: 266 GQAISSHSASSSGSEAVPRVLAETWNSSNGQ 293
            +A S  + S + S      LA   +  NG+
Sbjct: 174 -EATSDENTSEASSSLRSEKLAMATSGPNGR 197

[Close]

BLAST of Moc02g01470 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.8e-21
Identity = 66/141 (46.81%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 138 HNIACASNPYQDPYYPGLMTAYGHQPLG-YPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 197
           +++A    PY DPYY  +         G +   +G+    + LP +  +EPVFVNAKQY 
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 198 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKSEVNSSCSTM 257
           GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG GGRF  AKK + +   S+ 
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170

Query: 258 KDKECGSGQAISSHSASSSGS 276
           ++K   +  A  S  A+SSG+
Sbjct: 171 EEK--SNLSAGKSAMAASSGT 189

[Close]

BLAST of Moc02g01470 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-19
Identity = 80/205 (39.02%), Postives = 107/205 (52.20%), Query Frame = 0


Query: 76  ESNEGQSMSNDDLNEEDDDDNTKDSQAASY----GQEQHNTQRAVSTAP------TVHGG 135
           +S  G   +   ++ +D D ++  S   SY         N  R +S +       T   G
Sbjct: 49  DSRPGHIQTTKQISFQDQDSSSTQSTGQSYTEVASSGDDNPSRQISFSAKSGSEITQRKG 108

Query: 136 CITQPPQLELVGH-NIACA------SNPYQDPYYPGLMTA--YGHQPLGYPPFLGMPHAR 195
             + P Q  + G  NI  A      S  Y DP+Y GL+ A      P   P  + M   R
Sbjct: 109 FASNPKQGSMTGFPNIHFAPAQANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGR 168

Query: 196 MALPLEVTQ-EPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRAR 255
           + LP E+T+ +PVFVNAKQY  I+RRRQ RAK E +NKLI+ RKPYLHESRH HA++R R
Sbjct: 169 VPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPR 228

Query: 256 GSGGRF--AKKSEVNSSCSTMKDKE 259
           GSGGRF   KK    S  +  +++E
Sbjct: 229 GSGGRFLNTKKLLQESEQAAAREQE 253

[Close]

BLAST of Moc02g01470 vs. ExPASy TrEMBL
Match: A0A6J1D691 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111017316 PE=3 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 1.8e-188
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0


Query: 17  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 76
           MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 60

Query: 77  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 136
           SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV
Sbjct: 61  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 120

Query: 137 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 196
           GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 197 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 256
           GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD
Sbjct: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 240

Query: 257 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 316
           KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ
Sbjct: 241 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 300

Query: 317 NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 344

[Close]

BLAST of Moc02g01470 vs. ExPASy TrEMBL
Match: A0A6J1FW74 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 1.1e-161
Identity = 301/343 (87.76%), Postives = 317/343 (92.42%), Query Frame = 0


Query: 18  HSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASES 77
           HSK +SVNQLESEPPNMQQT SYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASES
Sbjct: 20  HSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASES 79

Query: 78  NEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELVG 137
           N+G SMSNDDLNE+DDDD TKDS A SYGQ Q+N+Q AVS APTVHGGCITQPPQLELVG
Sbjct: 80  NDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVG 139

Query: 138 HNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 197
           H+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 140 HSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 199

Query: 198 ILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKDK 257
           ILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+K
Sbjct: 200 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 259

Query: 258 ECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQN 317
           + GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE Y+AR+YVNGS  F N
Sbjct: 260 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 319

Query: 318 YSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           YSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 320 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 361

[Close]

BLAST of Moc02g01470 vs. ExPASy TrEMBL
Match: A0A6J1FTP1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 2.4e-161
Identity = 301/344 (87.50%), Postives = 317/344 (92.15%), Query Frame = 0


Query: 17  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 76
           M SK +SVNQLESEPPNMQQT SYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 77  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 136
           SN+G SMSNDDLNE+DDDD TKDS A SYGQ Q+N+Q AVS APTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 137 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 196
           GH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 197 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 256
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+
Sbjct: 181 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240

Query: 257 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 316
           K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE Y+AR+YVNGS  F 
Sbjct: 241 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFH 300

Query: 317 NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           NYSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Moc02g01470 vs. ExPASy TrEMBL
Match: A0A6J1JHB5 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111484375 PE=3 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 4.6e-160
Identity = 300/344 (87.21%), Postives = 315/344 (91.57%), Query Frame = 0


Query: 17  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 76
           M SK +SVNQLESEPPNMQQT SYSEPWWRSIGYN IS PAAGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 77  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 136
           SN+G SMSNDDLNE+DDDD TKDS A SYGQ Q+N Q AVS APTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLELV 120

Query: 137 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 196
           GH+IACASN YQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 197 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 256
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS ST+K+
Sbjct: 181 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKN 240

Query: 257 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 316
           K+ GSGQA SSHSA SSGSEA P  LAETWNSSNGQQEARTQLHE YEAR+YVNGS  F 
Sbjct: 241 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFH 300

Query: 317 NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           NYSSFQASSYALR+GERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Moc02g01470 vs. ExPASy TrEMBL
Match: A0A0A0KEL9 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G439960 PE=3 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 5.1e-159
Identity = 302/344 (87.79%), Postives = 316/344 (91.86%), Query Frame = 0


Query: 17  MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 76
           M SKSKSVNQLESEPPNMQQT S+SEPWWRSIGYN ISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 77  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 136
           SN+GQSMSNDDLNEEDDD+ TKDS  AS+GQ QHN Q AVS AP VH GCITQPPQLELV
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSH-ASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELV 120

Query: 137 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 196
           GH+IACASNPYQDPYY G+M AYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 197 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 256
           GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKK+E NS  STMKD
Sbjct: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKD 240

Query: 257 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 316
           K+ GSGQAISSHSA SSGS+A P  LAETWNSSNGQQE+RTQLHE YEAR+Y+NGSS F 
Sbjct: 241 KDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFH 300

Query: 317 NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           NYSSFQASSY LR+GERG+DGDCSGQQR SISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK 341

[Close]

BLAST of Moc02g01470 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 225.3 bits (573), Expect = 7.7e-59
Identity = 144/277 (51.99%), Postives = 181/277 (65.34%), Query Frame = 0


Query: 20  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 79
           +SK   + E E  N   +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SE
Sbjct: 2   QSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-SE 61

Query: 80  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTV---HGGCITQPPQL 139
           SN+  S S D     ++D   KDSQAA+  +  ++       A ++   H   + QPP  
Sbjct: 62  SNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPP-- 121

Query: 140 ELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAK 199
           ELVGH IAC  NPYQDPYY GLM AYGHQ LG+ P+LGMP  R ALPL++ QEPV+VNAK
Sbjct: 122 ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAK 181

Query: 200 QYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCS 259
           QY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKKSEV +   +
Sbjct: 182 QYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDA 241

Query: 260 TMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS 290
             +D+E GS       + +SSGSE V     ET NSS
Sbjct: 242 GGRDRERGS-------ATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of Moc02g01470 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 225.3 bits (573), Expect = 7.7e-59
Identity = 144/277 (51.99%), Postives = 181/277 (65.34%), Query Frame = 0


Query: 20  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 79
           +SK   + E E  N   +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SE
Sbjct: 2   QSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-SE 61

Query: 80  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTV---HGGCITQPPQL 139
           SN+  S S D     ++D   KDSQAA+  +  ++       A ++   H   + QPP  
Sbjct: 62  SNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPP-- 121

Query: 140 ELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAK 199
           ELVGH IAC  NPYQDPYY GLM AYGHQ LG+ P+LGMP  R ALPL++ QEPV+VNAK
Sbjct: 122 ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAK 181

Query: 200 QYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS-SCS 259
           QY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKKSEV +   +
Sbjct: 182 QYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDA 241

Query: 260 TMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS 290
             +D+E GS       + +SSGSE V     ET NSS
Sbjct: 242 GGRDRERGS-------ATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of Moc02g01470 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 223.4 bits (568), Expect = 2.9e-58
Identity = 145/281 (51.60%), Postives = 183/281 (65.12%), Query Frame = 0


Query: 20  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 79
           +SK   + E E  N   +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SE
Sbjct: 2   QSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-SE 61

Query: 80  SNEGQSMSNDDLNEEDDDDNTKDSQAA-------SYGQEQHNTQRAVSTAPTVHGGCITQ 139
           SN+  S S D     ++D   KDSQAA       ++G E ++   ++     +H   + Q
Sbjct: 62  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIR---NMHDQPLVQ 121

Query: 140 PPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVF 199
           PP  ELVGH IAC  NPYQDPYY GLM AYGHQ LG+ P+LGMP  R ALPL++ QEPV+
Sbjct: 122 PP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVY 181

Query: 200 VNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS 259
           VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKKSEV +
Sbjct: 182 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA 241

Query: 260 -SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS 290
              +  +D+E GS       + +SSGSE V     ET NSS
Sbjct: 242 GEDAGGRDRERGS-------ATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Moc02g01470 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 223.4 bits (568), Expect = 2.9e-58
Identity = 145/281 (51.60%), Postives = 183/281 (65.12%), Query Frame = 0


Query: 20  KSKSVNQLESEPPN---MQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 79
           +SK   + E E  N   +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SE
Sbjct: 2   QSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-SE 61

Query: 80  SNEGQSMSNDDLNEEDDDDNTKDSQAA-------SYGQEQHNTQRAVSTAPTVHGGCITQ 139
           SN+  S S D     ++D   KDSQAA       ++G E ++   ++     +H   + Q
Sbjct: 62  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIR---NMHDQPLVQ 121

Query: 140 PPQLELVGHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVF 199
           PP  ELVGH IAC  NPYQDPYY GLM AYGHQ LG+ P+LGMP  R ALPL++ QEPV+
Sbjct: 122 PP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVY 181

Query: 200 VNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNS 259
           VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKKSEV +
Sbjct: 182 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA 241

Query: 260 -SCSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSS 290
              +  +D+E GS       + +SSGSE V     ET NSS
Sbjct: 242 GEDAGGRDRERGS-------ATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Moc02g01470 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 205.7 bits (522), Expect = 6.3e-53
Identity = 156/350 (44.57%), Postives = 192/350 (54.86%), Query Frame = 0


Query: 15  EGMHSKSKS-VNQLESEPPNMQQTGSYS-EPWWR-SIGYNPISPPAAGGNVSNSTSLECT 74
           E MHSKS S  N+++SE      +   S  PW R +   N  S   AG   S S +L   
Sbjct: 4   EDMHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL--- 63

Query: 75  NGASESNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPP 134
             A ESN  +S SN D     +   T   Q+A    +++          ++H G    PP
Sbjct: 64  --ALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYSDKNQ--------ESLHHGITQPPP 123

Query: 135 QLELVGHNIACA-SNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFV 194
             +LVGH +  A SNPYQDPYY G+M AYGH PLG+ P+ GMPH+RM LP E+ QEPVFV
Sbjct: 124 HPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFV 183

Query: 195 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSS 254
           NAKQYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK+  N+ 
Sbjct: 184 NAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKT--NTE 243

Query: 255 CSTMKDKECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVN 314
            S  K +E  +G    S S+S+S          E W                       N
Sbjct: 244 ASKRKAEEKSNGHVTQSPSSSNSDQ-------GEAW-----------------------N 303

Query: 315 GSSHFQNYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 361
           G          Q+S+Y     +R E+G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 304 GDYRTPQGDEMQSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

The following BLAST results are available for this feature:

BLAST of Moc02g01470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148721.1	3.7e-188	100.00	nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148...	[more]
KAG6570399.1	4.5e-162	86.82	Nuclear transcription factor Y subunit A-1, partial [Cucurbita argyrosperma subs...	[more]
KAG7010273.1	2.3e-161	87.79	Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022944164.1	2.3e-161	87.76	nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata]	[more]
XP_022944166.1	5.0e-161	87.50	nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata] ...	[more]

BLAST of Moc02g01470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	4.1e-57	51.60	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	8.9e-52	44.57	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	1.3e-21	43.05	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	4.8e-21	46.81	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	1.2e-19	39.02	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Moc02g01470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D691	1.8e-188	100.00	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1FW74	1.1e-161	87.76	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1FTP1	2.4e-161	87.50	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JHB5	4.6e-160	87.21	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114843...	[more]
A0A0A0KEL9	5.1e-159	87.79	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G43996...	[more]

BLAST of Moc02g01470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.2	7.7e-59	51.99	nuclear factor Y, subunit A1	[more]
AT5G12840.4	7.7e-59	51.99	nuclear factor Y, subunit A1	[more]
AT5G12840.1	2.9e-58	51.60	nuclear factor Y, subunit A1	[more]
AT5G12840.3	2.9e-58	51.60	nuclear factor Y, subunit A1	[more]
AT3G20910.1	6.3e-53	44.57	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 187..209 score: 74.15 coord: 218..241 score: 81.94
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 183..244 e-value: 2.3E-35 score: 133.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 186..241 e-value: 2.0E-26 score: 92.3
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 46..351
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 184..244 score: 36.156738
None	No IPR available	GENE3D	6.10.250.2430		coord: 184..246 e-value: 2.8E-30 score: 106.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..44
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 46..351
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 189..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g01470.1	Moc02g01470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity