Moc02g01450 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc02g01450
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransmembrane protein
Locationchr2: 1099085 .. 1099907 (-)
RNA-Seq ExpressionMoc02g01450
SyntenyMoc02g01450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAAGGGAAACAGAGTCCTGCTCTTTGCGCAGTCTTCTGCCACATCCTAACACGACGCCGTTTTCTCCTCACCTCGGAAGGTGCACCGTAACTACCATGAACCCTCCTCCACTCCACCATCCCTCTTCATCTTCTTCCTCCCGCCACCGTTTCTTCTAGCCCTAGGCCAAAATTAGCTTTACAAACAGAGAACCATTAAAATGGCAGTAGCCCACCATCACTCCCATTGAATACACTTCAAAAATCAAAAAAACAAACAGAAAAAAGTGACCCATTGATTGAAATTATCGCAAGGGGAAAGTAGTGGCACATGGACAAATTAAATTAACCCTACACAGTTCAAATTCAAAAAGAAGAAAAAAAATCATGATAATATTACAGAGCAAACCTAATTTGAAAAGGGAAAAAAAACTGCATTTCCAAGCTCAAATTCTCACACACAGTGAAATGACTGGAAAAAGAAGAAAAAACCCCAAACTTATTGAAACTAATATCTAATAAAAAAAGAAAAAGAAAAGAAAAGAGAAGAAAAATCAGAACTTGGTATTTGATGATTGATATCTCTGTAAATTTTTGTATGAACACACGAGCTTAAATTGGGTTTAGCTTTCAGACTGGAATGTCCGGCAGCGCGAAGAAGAAGAAGAGCTCTAATTCCGGAGGGGCAAAAAAGGCAATTGGCGATCGCCGGAAAGAGCAATCGGAAACGGGTCTTTGCTTCTTCGGCGCCGGCGGGCATGTTACAATCTCCGGAATTCTGAATCTCTCTGCTCTCGGCGTGCTGCAGCCGCCGTCGATGTCGTCGTTGGAACACTGA

mRNA sequence

ATGGAGGAAAGGGAAACAGAGTCCTGCTCTTTGCGCAGTCTTCTGCCACATCCTAACACGACGCCGTTTTCTCCTCACCTCGGAAGCTTTCAGACTGGAATGTCCGGCAGCGCGAAGAAGAAGAAGAGCTCTAATTCCGGAGGGGCAAAAAAGGCAATTGGCGATCGCCGGAAAGAGCAATCGGAAACGGGTCTTTGCTTCTTCGGCGCCGGCGGGCATGTTACAATCTCCGGAATTCTGAATCTCTCTGCTCTCGGCGTGCTGCAGCCGCCGTCGATGTCGTCGTTGGAACACTGA

Coding sequence (CDS)

ATGGAGGAAAGGGAAACAGAGTCCTGCTCTTTGCGCAGTCTTCTGCCACATCCTAACACGACGCCGTTTTCTCCTCACCTCGGAAGCTTTCAGACTGGAATGTCCGGCAGCGCGAAGAAGAAGAAGAGCTCTAATTCCGGAGGGGCAAAAAAGGCAATTGGCGATCGCCGGAAAGAGCAATCGGAAACGGGTCTTTGCTTCTTCGGCGCCGGCGGGCATGTTACAATCTCCGGAATTCTGAATCTCTCTGCTCTCGGCGTGCTGCAGCCGCCGTCGATGTCGTCGTTGGAACACTGA

Protein sequence

MEERETESCSLRSLLPHPNTTPFSPHLGSFQTGMSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPPSMSSLEH
Homology
BLAST of Moc02g01450 vs. NCBI nr
Match: XP_016900741.1 (PREDICTED: uncharacterized protein LOC107991009 [Cucumis melo] >KAA0041417.1 transmembrane protein [Cucumis melo var. makuwa] >TYJ96135.1 transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-14
Identity = 49/61 (80.33%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 35 SGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPPSMS 94
          +G A KKKSSNSGGAKKA+GDRR EQSET L FFGAGGHV ISGIL LSA GVLQPPS  
Sbjct: 4  TGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEH 63

Query: 95 S 96
          S
Sbjct: 64 S 64

BLAST of Moc02g01450 vs. NCBI nr
Match: QHO18661.1 (uncharacterized protein DS421_11g322430 [Arachis hypogaea])

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-07
Identity = 38/59 (64.41%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 40 KKKSSNSGGAKKAIGDRRKEQ---SETGLCFFGAGGHVTISGILNLSALGVLQPPSMSS 96
          KKK S SGG K   GDRRKEQ    E  LCFFGAGGHV ISGILN S  GV Q P ++S
Sbjct: 2  KKKRSKSGGEKNESGDRRKEQFEDDEITLCFFGAGGHVEISGILNFSPFGVEQQPPLTS 60

BLAST of Moc02g01450 vs. NCBI nr
Match: QHO48225.1 (uncharacterized protein DS421_1g03730 [Arachis hypogaea])

HSP 1 Score: 64.3 bits (155), Expect = 6.6e-07
Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 0

Query: 40 KKKSSNSGGAKKAIGDRRKEQ---SETGLCFFGAGGHVTISGILNLSALGVLQPPSMSS 96
          KKK S SGG K   GD RKEQ    E  LCFFGAGGHV ISGILN S  GV Q P ++S
Sbjct: 2  KKKRSKSGGEKNESGDLRKEQFEDDEITLCFFGAGGHVEISGILNFSPFGVEQQPPLTS 60

BLAST of Moc02g01450 vs. NCBI nr
Match: CAD5323680.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 62.4 bits (150), Expect = 2.5e-06
Identity = 36/54 (66.67%), Postives = 38/54 (70.37%), Query Frame = 0

Query: 38 AKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP 92
          A  KKSS SGGAKK I  RR  Q    LCFFGAGGHV+ISGIL+  A GV QPP
Sbjct: 13 ALTKKSSISGGAKKTICLRRNTQFFETLCFFGAGGHVSISGILDFLAFGVQQPP 66

BLAST of Moc02g01450 vs. NCBI nr
Match: GFY96234.1 (hypothetical protein Acr_11g0005400 [Actinidia rufa])

HSP 1 Score: 57.4 bits (137), Expect = 8.1e-05
Identity = 36/63 (57.14%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 34 MSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPPSM 93
          MS +A KKKSS SGG K AIG+ R E     L FFG  GH  ISG LNL A GV QP + 
Sbjct: 1  MSRNANKKKSSISGGEKAAIGELRSENLAATLFFFGGSGHDKISGNLNLFAFGVEQPDTS 60

Query: 94 SSL 97
          S L
Sbjct: 61 SLL 63

BLAST of Moc02g01450 vs. ExPASy TrEMBL
Match: A0A5D3BCF0 (Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001030 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.1e-15
Identity = 49/61 (80.33%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 35 SGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPPSMS 94
          +G A KKKSSNSGGAKKA+GDRR EQSET L FFGAGGHV ISGIL LSA GVLQPPS  
Sbjct: 4  TGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEH 63

Query: 95 S 96
          S
Sbjct: 64 S 64

BLAST of Moc02g01450 vs. ExPASy TrEMBL
Match: A0A1S4DXN3 (uncharacterized protein LOC107991009 OS=Cucumis melo OX=3656 GN=LOC107991009 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.1e-15
Identity = 49/61 (80.33%), Postives = 51/61 (83.61%), Query Frame = 0

Query: 35 SGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPPSMS 94
          +G A KKKSSNSGGAKKA+GDRR EQSET L FFGAGGHV ISGIL LSA GVLQPPS  
Sbjct: 4  TGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEH 63

Query: 95 S 96
          S
Sbjct: 64 S 64

BLAST of Moc02g01450 vs. ExPASy TrEMBL
Match: A0A7G2EN36 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS11614 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06
Identity = 36/54 (66.67%), Postives = 38/54 (70.37%), Query Frame = 0

Query: 38 AKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP 92
          A  KKSS SGGAKK I  RR  Q    LCFFGAGGHV+ISGIL+  A GV QPP
Sbjct: 13 ALTKKSSISGGAKKTICLRRNTQFFETLCFFGAGGHVSISGILDFLAFGVQQPP 66

BLAST of Moc02g01450 vs. ExPASy TrEMBL
Match: A0A7J0FBZ7 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_11g0005400 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.9e-05
Identity = 36/63 (57.14%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 34 MSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPPSM 93
          MS +A KKKSS SGG K AIG+ R E     L FFG  GH  ISG LNL A GV QP + 
Sbjct: 1  MSRNANKKKSSISGGEKAAIGELRSENLAATLFFFGGSGHDKISGNLNLFAFGVEQPDTS 60

Query: 94 SSL 97
          S L
Sbjct: 61 SLL 63

BLAST of Moc02g01450 vs. ExPASy TrEMBL
Match: A0A654F956 (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AN1_LOCUS13521 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.7e-04
Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 0

Query: 34 MSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP 92
          M+  A+K K+S    AKK I  RR  Q    LCFFGAGGHV+ISGIL+  A GV QPP
Sbjct: 1  MNKVARKNKTS----AKKTICLRRNTQFFETLCFFGAGGHVSISGILDFLAFGVQQPP 54

BLAST of Moc02g01450 vs. TAIR 10
Match: AT3G20900.1 (unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 1.1e-07
Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 0

Query: 34 MSGSAKKKKSSNSGGAKKAIGDRRKEQSETGLCFFGAGGHVTISGILNLSALGVLQPP 92
          M+  A+K K+S    AKK I  RR  Q    LCFFGAGGHV+ISGIL+  A GV QPP
Sbjct: 1  MNKVARKNKTS----AKKTICLRRNTQFFETLCFFGAGGHVSISGILDFLAFGVQQPP 54

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016900741.11.5e-1480.33PREDICTED: uncharacterized protein LOC107991009 [Cucumis melo] >KAA0041417.1 tra... [more]
QHO18661.11.0e-0764.41uncharacterized protein DS421_11g322430 [Arachis hypogaea][more]
QHO48225.16.6e-0762.71uncharacterized protein DS421_1g03730 [Arachis hypogaea][more]
CAD5323680.12.5e-0666.67unnamed protein product [Arabidopsis thaliana][more]
GFY96234.18.1e-0557.14hypothetical protein Acr_11g0005400 [Actinidia rufa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BCF07.1e-1580.33Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18... [more]
A0A1S4DXN37.1e-1580.33uncharacterized protein LOC107991009 OS=Cucumis melo OX=3656 GN=LOC107991009 PE=... [more]
A0A7G2EN361.2e-0666.67(thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOC... [more]
A0A7J0FBZ73.9e-0557.14Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_11g0005400 PE=4 SV=1[more]
A0A654F9565.7e-0456.90Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AN1_LOCUS13521 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT3G20900.11.1e-0756.90unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacter... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc02g01450.1Moc02g01450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane