Moc02g00980 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g00980
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein FLOURY 1-like
Location	chr2: 793300 .. 794375 (-)
RNA-Seq Expression	Moc02g00980
Synteny	Moc02g00980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCGATCCGAACCGAATTGGTTCCGATCAGTCAGCAAATACAAACCGAATCGAATTGATCATATCCGGTTCGATTCGGGTCAAGTTTGGGTTATAACGGAAAATAGCCTTCTTCTCCTACGCCAAATTGCCCTCCCCGCGGGCCGCAACCGCTCTCTCAGTCTTCATCTTCAGCCGCACTCTCTCAAATCGACGCCGGACTCTCGGACGGCCGGCAAAGCAATGGCCCTCCCCACTCGGCTTTTTACTTCTTCCTTCCGCCGGAGGTAGGGGCCACTGAACTTACACTCCCACCCCCAACTGATTCAGTGGAGCTTTGCTATCAGTAATTAGCCGTTCGTTTTTGTCTTTGCTTTCGCTTTTGCAATGCCCTTTCTGTTGCTATATTTGGATGAATCGCTAGGTCGCTTTGGTTTCCTCTGCACGTTTTTCTTGATTCGTTCTGAAACCGCTCAATTAGTTTTAGTCGCGTATGCGGATTTTAAGGTTTTTTTTTTTTGGTTGTGGTTGTGTTCTTGGAGTTTCTTGAAGGATTTTGTTGGGTTTGGTGATGGATATCGCTTTGCGTTTGAATAAGTTTTTGAAACAGAGTAGTGAGTAGTAAGTTTTTGGTGTTCGGATGTTTTCTGCGAGTTTTTGTAATTTGGGGGCTTTTTCTGCTTTTTTGGATGGCTTTGAAGGTTCTGCAATTCAGTTGGCATGGTGGGGATTTGATGCAATTTCTATGCGATTTTAGAGATAAATCTACTAATAACGTAAGGACTGGATTTTTATTCAAAAACAGTGTTGTGTTGAGGTGTGTAATTCAAAAACTATGCAAACTTGTGGAAGTAGACGACGGAATTGGTTGAAGAGGAATGGATTCTTGTTCAATAAATTCAATTTAGTTGGAAACTCCAAATGGCCGCAGTGGGGATGCGGACGGTGATGTTAAGAGTGAAGAAAAGGATGTAGTTTTAGAAGATGATATCCAGAACGAAGAGAAAGAAAATGATTCTGAAGGTGAAGATGCTGAATTTGATGTTACCAGATTAAGAAAATTTGATATTAGTATTAACATAGATTTTCCATAA

mRNA sequence

ATGAAGCGATCCGAACCGAATTGGTTCCGATCAGTCAGCAAATACAAACCGAATCGAATTGATCATATCCGGTTCGATTCGGGTCAAGTTTGGGTTATAACGGAAAATAGCCTTCTTCTCCTACGCCAAATTGCCCTCCCCGCGGGCCGCAACCGCTCTCTCAGTCTTCATCTTCAGCCGCACTCTCTCAAATCGACGCCGGACTCTCGGACGGCCGGCAAAGCAATGGCCCTCCCCACTCGGCTTTTTACTTCTTCCTTCCGCCGGAGGATTTTGTTGGGTTTGGTGATGGATATCGCTTTGCGTTTGAATAAGTTTTTGAAACAGAGTAGTGAGTATTGGCATGGTGGGGATTTGATGCAATTTCTATGCGATTTTAGAGATAAATCTACTAATAACTTGGAAACTCCAAATGGCCGCAGTGGGGATGCGGACGGTGATGTTAAGAGTGAAGAAAAGGATGTAGTTTTAGAAGATGATATCCAGAACGAAGAGAAAGAAAATGATTCTGAAGGTGAAGATGCTGAATTTGATGTTACCAGATTAAGAAAATTTGATATTAGTATTAACATAGATTTTCCATAA

Coding sequence (CDS)

ATGAAGCGATCCGAACCGAATTGGTTCCGATCAGTCAGCAAATACAAACCGAATCGAATTGATCATATCCGGTTCGATTCGGGTCAAGTTTGGGTTATAACGGAAAATAGCCTTCTTCTCCTACGCCAAATTGCCCTCCCCGCGGGCCGCAACCGCTCTCTCAGTCTTCATCTTCAGCCGCACTCTCTCAAATCGACGCCGGACTCTCGGACGGCCGGCAAAGCAATGGCCCTCCCCACTCGGCTTTTTACTTCTTCCTTCCGCCGGAGGATTTTGTTGGGTTTGGTGATGGATATCGCTTTGCGTTTGAATAAGTTTTTGAAACAGAGTAGTGAGTATTGGCATGGTGGGGATTTGATGCAATTTCTATGCGATTTTAGAGATAAATCTACTAATAACTTGGAAACTCCAAATGGCCGCAGTGGGGATGCGGACGGTGATGTTAAGAGTGAAGAAAAGGATGTAGTTTTAGAAGATGATATCCAGAACGAAGAGAAAGAAAATGATTCTGAAGGTGAAGATGCTGAATTTGATGTTACCAGATTAAGAAAATTTGATATTAGTATTAACATAGATTTTCCATAA

Protein sequence

MKRSEPNWFRSVSKYKPNRIDHIRFDSGQVWVITENSLLLLRQIALPAGRNRSLSLHLQPHSLKSTPDSRTAGKAMALPTRLFTSSFRRRILLGLVMDIALRLNKFLKQSSEYWHGGDLMQFLCDFRDKSTNNLETPNGRSGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVTRLRKFDISINIDFP

Homology

[Close]

BLAST of Moc02g00980 vs. NCBI nr
Match: XP_022149137.1 (protein FLOURY 1-like [Momordica charantia])

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13
Identity = 71/166 (42.77%), Postives = 75/166 (45.18%), Query Frame = 0


Query: 97  MDIALRLNKFLKQSSE----------------------------------YWHGGDLMQF 156
           MDIA RLNKFLKQSS                                    WHGGD MQF
Sbjct: 1   MDIASRLNKFLKQSSSEFKSWVLVFGCFPRVFVILGLFLLFWMALKVLQFSWHGGDFMQF 60

Query: 157 LCDFRDKSTNNLET------------------------------------------PNGR 185
           LCDFR+KS N + T                                           N +
Sbjct: 61  LCDFREKSANYVRTGFWLKTSVVEVCNSKTMQTCGSRRRNWLKIRSGFLFNKFNLVANSK 120

[Close]

BLAST of Moc02g00980 vs. NCBI nr
Match: XP_022985083.1 (protein FLOURY 1-like [Cucurbita maxima])

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-07
Identity = 56/162 (34.57%), Postives = 66/162 (40.74%), Query Frame = 0


Query: 97  MDIALRLNKFLKQSSEY---------------------------------WHGGDLMQFL 156
           MD++ RLNK LKQSSE+                                 WH GD M F 
Sbjct: 1   MDLSSRLNKLLKQSSEFKSWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFR 60

Query: 157 CDFRDKSTN-----------------------------------------NLETPNGRSG 185
           CDF++KS N                                         NL      + 
Sbjct: 61  CDFKEKSANIRDGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGCLFSKFNLVANPTWTV 120

[Close]

BLAST of Moc02g00980 vs. NCBI nr
Match: XP_038905035.1 (protein FLOURY 1-like [Benincasa hispida])

HSP 1 Score: 65.9 bits (159), Expect = 4.5e-07
Identity = 54/158 (34.18%), Postives = 67/158 (42.41%), Query Frame = 0


Query: 97  MDIALRLNKFLKQSSEY----------------------------------WHGGDLMQF 156
           M I+ RLNK L+QSSE+                                  WHG D MQ 
Sbjct: 1   MGISSRLNKLLEQSSEFKSLFLVFGCFPRVFIILGLFLLLFWVSLKVVQFSWHGRDFMQL 60

Query: 157 LCDFRDKSTN------------------------------------NLETPNGRSGDADG 185
           LCDF++KS N                                    NL   +  + D DG
Sbjct: 61  LCDFKEKSDNRRAGIWLKTSVVEVCNSCRSRRLDLMKKNGFLFSMFNLVGNSKWAVDLDG 120

[Close]

BLAST of Moc02g00980 vs. NCBI nr
Match: XP_023552476.1 (protein FLOURY 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-06
Identity = 55/162 (33.95%), Postives = 66/162 (40.74%), Query Frame = 0


Query: 97  MDIALRLNKFLKQSSEY---------------------------------WHGGDLMQFL 156
           MD + RLNK LKQSSE+                                 WH GD M F 
Sbjct: 1   MDFSSRLNKLLKQSSEFKSWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFR 60

Query: 157 CDFRDKSTN------------------NLETPNGR-----------------------SG 185
           CDF++KS N                   ++T   R                       + 
Sbjct: 61  CDFKEKSANIRAGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGFLFSKFNLIANPKWTV 120

[Close]

BLAST of Moc02g00980 vs. NCBI nr
Match: KAG6576883.1 (Myosin-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.0 bits (149), Expect = 6.5e-06
Identity = 54/162 (33.33%), Postives = 64/162 (39.51%), Query Frame = 0


Query: 97  MDIALRLNKFLKQSSEY---------------------------------WHGGDLMQFL 156
           MD + RLNK LKQSSE+                                 WH GD M F 
Sbjct: 1   MDFSSRLNKLLKQSSEFKSWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFR 60

Query: 157 CDFRDKSTN-----------------------------------------NLETPNGRSG 185
           CDF++KS N                                         NL      + 
Sbjct: 61  CDFKEKSANIRAGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGFLFSKFNLVANPKWTV 120

[Close]

BLAST of Moc02g00980 vs. ExPASy TrEMBL
Match: A0A6J1D707 (protein FLOURY 1-like OS=Momordica charantia OX=3673 GN=LOC111017630 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.4e-14
Identity = 71/166 (42.77%), Postives = 75/166 (45.18%), Query Frame = 0


Query: 97  MDIALRLNKFLKQSSE----------------------------------YWHGGDLMQF 156
           MDIA RLNKFLKQSS                                    WHGGD MQF
Sbjct: 1   MDIASRLNKFLKQSSSEFKSWVLVFGCFPRVFVILGLFLLFWMALKVLQFSWHGGDFMQF 60

Query: 157 LCDFRDKSTNNLET------------------------------------------PNGR 185
           LCDFR+KS N + T                                           N +
Sbjct: 61  LCDFREKSANYVRTGFWLKTSVVEVCNSKTMQTCGSRRRNWLKIRSGFLFNKFNLVANSK 120

[Close]

BLAST of Moc02g00980 vs. ExPASy TrEMBL
Match: A0A6J1JCJ1 (protein FLOURY 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483161 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07
Identity = 56/162 (34.57%), Postives = 66/162 (40.74%), Query Frame = 0


Query: 97  MDIALRLNKFLKQSSEY---------------------------------WHGGDLMQFL 156
           MD++ RLNK LKQSSE+                                 WH GD M F 
Sbjct: 1   MDLSSRLNKLLKQSSEFKSWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFR 60

Query: 157 CDFRDKSTN-----------------------------------------NLETPNGRSG 185
           CDF++KS N                                         NL      + 
Sbjct: 61  CDFKEKSANIRDGIWLKTSVVEVCNSKTVQTCRSRRLNWLKKNGCLFSKFNLVANPTWTV 120

[Close]

BLAST of Moc02g00980 vs. ExPASy TrEMBL
Match: A0A1S3BY69 (uncharacterized protein LOC103494857 OS=Cucumis melo OX=3656 GN=LOC103494857 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.5e-05
Identity = 51/132 (38.64%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 91  ILLGLVMDIALRLNKFLKQSSEYWHGGDLMQFLCDFRDKS----------TNNLETPNGR 150
           I+LGL +   L     LK     WHG DLMQ L DFR KS          TN +E  N  
Sbjct: 28  IILGLFL---LLFWASLKVVQFSWHGRDLMQLLYDFRGKSDNIRAGIWLKTNVVEVCNFT 87

Query: 151 SG----------------------------DADGDVKSEEKDVVLEDDIQNEEKENDSEG 185
            G                            D++GDV+S+EK+ +LE+D+QNEEKEN S  
Sbjct: 88  CGISRRLDWLKKNGFLFCKFNLVAKSKWAVDSEGDVRSDEKNEMLEEDVQNEEKENYS-- 147

[Close]

BLAST of Moc02g00980 vs. ExPASy TrEMBL
Match: A0A0A0KYH0 (GTD-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G181710 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.0e-04
Identity = 50/132 (37.88%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 91  ILLGLVMDIALRLNKFLKQSSEYWHGGDLMQFLCDFRDKS----------TNNLETPNGR 150
           I+LGL +   L     LK     WHG DLMQ L DFR+KS          TN +E  N  
Sbjct: 28  IILGLFL---LLFWLSLKVVQFSWHGRDLMQLLYDFREKSDNIRAGTWLKTNVVEVCNSI 87

Query: 151 SG----------------------------DADGDVKSEEKDVVLEDDIQNEEKENDSEG 185
            G                            D++ DV+S+EK+ +LE+D+QNEEKEN S  
Sbjct: 88  CGISKRSDWLKKNGFLFCKFNLVANSKWAVDSEDDVRSDEKNEMLEEDVQNEEKENYS-- 147

The following BLAST results are available for this feature:

BLAST of Moc02g00980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149137.1	1.1e-13	42.77	protein FLOURY 1-like [Momordica charantia]	[more]
XP_022985083.1	2.6e-07	34.57	protein FLOURY 1-like [Cucurbita maxima]	[more]
XP_038905035.1	4.5e-07	34.18	protein FLOURY 1-like [Benincasa hispida]	[more]
XP_023552476.1	2.2e-06	33.95	protein FLOURY 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6576883.1	6.5e-06	33.33	Myosin-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Moc02g00980 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc02g00980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D707	5.4e-14	42.77	protein FLOURY 1-like OS=Momordica charantia OX=3673 GN=LOC111017630 PE=4 SV=1	[more]
A0A6J1JCJ1	1.3e-07	34.57	protein FLOURY 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483161 PE=4 SV=1	[more]
A0A1S3BY69	3.5e-05	38.64	uncharacterized protein LOC103494857 OS=Cucumis melo OX=3656 GN=LOC103494857 PE=...	[more]
A0A0A0KYH0	1.0e-04	37.88	GTD-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G181710...	[more]

BLAST of Moc02g00980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g00980.1	Moc02g00980.1	mRNA