Moc02g00140 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g00140
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	NusB domain-containing protein
Location	chr2: 141718 .. 146309 (+)
RNA-Seq Expression	Moc02g00140
Synteny	Moc02g00140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGAGCCTCCCTTCTCTTCTGCCTATCTTGCTATTCGTCTCCGTGCTTCAGGCCTAATTTTAATCTATCTTCCCACATTTCTGGAATATGCCGGTTTCCGGCTAGCGCAGCCGTTCCGTACGTTAAAGATTCCGTGCCACACCTCTGCGCTCAAGCCTCGCTTCGCGCTTCTACTTCTTTTCTCGAAAATTCTGTGACTGGAGAGAGCGATTCTATTTCAACTTCTTCCAAAGAAATAATACCCAAGGTCGACAAGACCGGGAGGCTTTGTAGCCCCAGAGCTGCCAGAGAGCTCGCTTTGTAAGATTCACCCTTTCCTTCCCACTTCTTTTCTTCTTTCTTTGAATTTTTTTTTCTTATCTATTCACAAAATTGGTGCAGGCACTCGGAATGCGCTATAAGAAATTGTTTAATTTCAAGACTTGTAAATAATTATAATCTTACTAGATCATTCAATCGCAGGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTCCGACCCAGTTCGGCTCTTCGAGAAGCGGTTGAATGCCCGGAGAGGTAATCTATGGTCGAGACGGGTGCTCTAGTGCTCCATATTCTAATTGATGATTTTATCGTATTGGAGAATTGGAAGTTACATCTTTAACTGAAATATGACACCAACTGCTTACTTCATCTGTACATACAATTCAGAACCGGGATATGAATTTGACAAGGCATCATTGATGGCATATAATCATATGAGCTTTGGGGGCCCGCCAGTTACTGTGGAAACAGCTGAAGAGGCAGATGAGCTTTTACGTAAAGATGAAAAGGATTTTGCAATTGGTAAATAATTTTAAGGTTTTCTTACATGTATTATTTCATCTTCTCAATTCAGTTATTACTGTTTTCTAAAAGCACAATTGGGCTCTCGTCTAATATATGCTTGTCTTCAATTAGAGATGCTTTCCCTTCATACCTAGTACGAAGAGAATTTGATGGCAAAAAAGCCATCTTATTCCCTTCATAGTGATATCATGAGGCATGAGAACTGTTTAGCGCCTTTCTTCTTTTTCCAGCCTCAGATGGAGTTCATAAACAATAAGTAAACCACCTTCAACGTATAACTCTTTTGAACTTGCATACACAGACATGATATCACCTTTTTTTAGAAAAAATATATTTGAGAAAGAGAGAGCAGTTAAAGAAGTTATATAAAGTAAGACCTGCTAGCCATGGGAATAAAGTGATTACTTTAACCAAAGTAGTAATGCTCCGGAGTTGAGATAGTAAAAGTGTTAATTTATAGTGGTATCTGCAAAATAGTTCACAATTTGATTAGAAGAAAGTACACGTTGGACTGTCAGTTACTCGTGGATAATTTGATGTTTGGAAAATGAAAATAAATCTTGACATGCTTGATGCAAGTGTGGAAAACAGGATTAGACACTAGTGCATGTGCACCCCTGTTACACTAGGTAAGGGGTGCATAAGAGAGATAAAAAGATAGTTCCCGAGGAAGAGAACACACCCAGATGATTTTAGTGAATACATTGTTATGTGCTTGATATATGGATGCAATGTTTGACTGAGCAACAACCTATTGCTTGGATTATAATCAAGGGATGATAATGAGCCAAAAAAAGATGCAATATCTTGCTACAATATTTGAATCGTTTAGGTATGATCTTTAATCAACATCCAAACACCTTTAAAAGTACTATTCGACATGGATGCAAGTCATTCTTTAACTAAGCATAAGACATGCTTAAGAACTTCTGGTGATTAATGATTGTTCATCTAAGACATGCTTAAATGTCCTAACTTTCTATGACACCTATACCTTGGTACAAGCTAATACAAAAGCGTTGCTAGGTTTGATGAAAAAGACCAAGGAGGTTGGTCTTCCCATTCTTCGATGGCTTAGCCATGTAAAATAAGCCCTTACCTAATAGGAATTGCACTATTGTAGTGTAGAGTTGATGAGTCTGCTAGTGTTTCCAAACAGTAGAGATCCTTTGTGAGAATAGAGATGACAATAGAGTAGAGTAGGGTTGGGAATGTCCTCCCTATTCCCAACCAGGCTAGGAATTTTAATACTCATCCTTGGACCCTAGGCCATTATTTGATTTTCATTCACAGCAGCTTTACGGATTGAATTTTCTTGACTATTTTTTAATTTTAATATATATATAATTTTTTTTTTTGGTATAAAGAAACACTGATTCATTGCTAATAATTATATAAAAGCTAAATTTCTTTATTTGATAAAATAGAAAAATTATTGTTAAAATGCTTATGAGTTTTGAATGTTAATTTTGTAAAAATACTTAATATTTTTATCAATATATATATATATATAGGAAAAGTTCAAAATAGATTTGTAATAATTGAAAATTACGAGATGCCAACACGAGCTTAGCTTAGCAGTAATTGGCACATGTTTCTGACCACGAAGTCATGAGTTCGAATAATTGAAAATTCCGAGATGAGGGTGGCAGTAGGTTGGAGGAAAGTCAAGTTGACATTTGAAATGAGGAATACATTCTTTGTCCTCGATCGAGAACGAATTGAGAAAATAGACTTCTATGCACCACCCTTTTTCCATCTTCAAGGGAAGTCGAGGTGGCAGTTGAATGGGGAAATGCATTCTTTGGCCTCAGAACGAATTGAGAAAAAAGACTTCTTCCATCCAAGACCCTACTTCCATCTTCTCATTTAAGCAATTATAGTTAGAATACTCTTTGTCATCTGGAAGATTTTCTGACTTTCCCTCTCTTCCGAACCTATATCATCTATCATATTTTTTCTTATCCCAGGAAAAAAAGAAGGAATCTTAAGAAAATAATGTGAAAATTAAAATTAAGGCTTTGTATTTTATGTGCAATTACGTTACCTTTATTGTAAATCAATCTGACGATGTATATTTCTTTATGCACAATAGAACTTATCATGACATATAGTAGTCACTAACAAACAACTTTATCTATAGCTTCTTTTTCTAGATGCTTTTATTACAGTTGTAAATGCAGCATTGTTTTAGTGTTAGTCAAGTCTTGTTTTCTGCATGACTGTACCTCAGAAGCAGCAATCCTTGCGGCCCCACCAAAGATGGTCTACAGCAAACTCATTTTACGGTAAACGTGGTTTATAATTATTCCCCTGCTTTTGGCAGGGAATGATATGATGAAAATTTAGTATGAATTCCATGTACTTTGTAAATGCTATTTATTTCAACGATGAAATAAGGTCAGACATTGTCTTCGTGGTTTTTCAGGTTTTCACGCAAACTTTTGGTTGCAGTTGTGGACAGATGGGATAATCACGTGCTTAAAATTGAAAATGTCATTCCTTCAACTTGGAAGGTCCGGCAAAGAGCATGCTTCTTTTTCCTATCTTTGTTTTCTGATTTTCTCCTCTCTTTTAGTTGGGATTCTAAGTTGAAGCATTTATCGTGTGGTTATAATACTCCTCCAGTACTGATATTTTTCTTAGAGCATATGTGCGCTGTTGGTCATTTAAGGGGTTTTAAAGACTTGAATTGGAGTTCCCCTTTTGCATGACTTGAAATTTGAAACGCTTCATATGATGATGGCAAGGATGGAACCACAAACATACGTGCAATATTTCAACCATGGGTATTGTTGAATCTCTCACGTGAGTGTTGGAATTCCTGAGCTTTAATACTCGAAGGTTTGAGCTTAGTGGTAAATATCCTTGGGACTCGGAGAAAATAGTTAATGGTTTCAGAATTCCTTGGATCACCTTTCCAGAATATTATATCTTACAAGTTCTTGACAACGGAATTATGTACTCGTCCAAGTTTGAACTTAGAAAGTATTAAGTTATTAATGGGTTTTAAAACAAAAACCTTTAGTCTTGAGAACATGAATTTAATAGTTATCTCTGCAACTGCGTTAAGCATTGTACAAATGTATTATCATTCTATTGGATTTTGTTTTTTTCTAGTGACCAAAGTAGTTGAGCTTCTCTGTTTCTTCTCGTCTTTTAATTGGCATGTGCACTTATAAGTGAACCTAAAGTTGAATTTTACGTTTTGTTAATCTATTAAATAAATCATTCCAGCCTTTATATTCTCCTTATTATCCAGACATTGCAGTTGAATGAGTCCAAAGCAAAGATCGTGTGCTTGGACTTTAAACTTCTTGAATTAAGCTGCGTATTTTCTAAGGATTTTTCTCTCAAATAAGTAATGGCGCTTACGGAGATTGTATGTCTCATGCACTCGTATATTTCAGAGCAAGCCAGCAGGACGGATTCTGGAACTTTGTATTCTTCACCTGGCTATGTCTGAAATAACGGTTGTTGGAACAAGACGTCAGATTGTCATTAACGAGGTAAATGTGTCAGCTTCTTTAATTCAAGGTTACAATTATCAACTCAAATCTGTTGATATACGTTTGCACCAATCCCTTTTTTTTTTTTTTTTTGGTAACACTGTTCTTGGTTATTGATAAAGGCCATTGATCTTGCAAAACGATTCTGTGATGGAGCAGCCCCTCGTATTATTAATGGGTGCCTAAGGACCTTTGTGAAGGACATTAAAGAAATTGATTCAACTTATGCTCGAGAGAAGCAAGAAGTAGCCGGTGCACGACTCTGA

mRNA sequence

ATGGAGGGAGCCTCCCTTCTCTTCTGCCTATCTTGCTATTCGTCTCCGTGCTTCAGGCCTAATTTTAATCTATCTTCCCACATTTCTGGAATATGCCGGTTTCCGGCTAGCGCAGCCGTTCCGTACGTTAAAGATTCCGTGCCACACCTCTGCGCTCAAGCCTCGCTTCGCGCTTCTACTTCTTTTCTCGAAAATTCTGTGACTGGAGAGAGCGATTCTATTTCAACTTCTTCCAAAGAAATAATACCCAAGGTCGACAAGACCGGGAGGCTTTGTAGCCCCAGAGCTGCCAGAGAGCTCGCTTTGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTCCGACCCAGTTCGGCTCTTCGAGAAGCGGTTGAATGCCCGGAGAGAACCGGGATATGAATTTGACAAGGCATCATTGATGGCATATAATCATATGAGCTTTGGGGGCCCGCCAGTTACTGTGGAAACAGCTGAAGAGGCAGATGAGCTTTTACGTAAAGATGAAAAGGATTTTGCAATTGAAGCAGCAATCCTTGCGGCCCCACCAAAGATGGTCTACAGCAAACTCATTTTACGGTTTTCACGCAAACTTTTGGTTGCAGTTGTGGACAGATGGGATAATCACGTGCTTAAAATTGAAAATGTCATTCCTTCAACTTGGAAGAGCAAGCCAGCAGGACGGATTCTGGAACTTTGTATTCTTCACCTGGCTATGTCTGAAATAACGGTTGTTGGAACAAGACGTCAGATTGTCATTAACGAGGCCATTGATCTTGCAAAACGATTCTGTGATGGAGCAGCCCCTCGTATTATTAATGGGTGCCTAAGGACCTTTGTGAAGGACATTAAAGAAATTGATTCAACTTATGCTCGAGAGAAGCAAGAAGTAGCCGGTGCACGACTCTGA

Coding sequence (CDS)

ATGGAGGGAGCCTCCCTTCTCTTCTGCCTATCTTGCTATTCGTCTCCGTGCTTCAGGCCTAATTTTAATCTATCTTCCCACATTTCTGGAATATGCCGGTTTCCGGCTAGCGCAGCCGTTCCGTACGTTAAAGATTCCGTGCCACACCTCTGCGCTCAAGCCTCGCTTCGCGCTTCTACTTCTTTTCTCGAAAATTCTGTGACTGGAGAGAGCGATTCTATTTCAACTTCTTCCAAAGAAATAATACCCAAGGTCGACAAGACCGGGAGGCTTTGTAGCCCCAGAGCTGCCAGAGAGCTCGCTTTGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTCCGACCCAGTTCGGCTCTTCGAGAAGCGGTTGAATGCCCGGAGAGAACCGGGATATGAATTTGACAAGGCATCATTGATGGCATATAATCATATGAGCTTTGGGGGCCCGCCAGTTACTGTGGAAACAGCTGAAGAGGCAGATGAGCTTTTACGTAAAGATGAAAAGGATTTTGCAATTGAAGCAGCAATCCTTGCGGCCCCACCAAAGATGGTCTACAGCAAACTCATTTTACGGTTTTCACGCAAACTTTTGGTTGCAGTTGTGGACAGATGGGATAATCACGTGCTTAAAATTGAAAATGTCATTCCTTCAACTTGGAAGAGCAAGCCAGCAGGACGGATTCTGGAACTTTGTATTCTTCACCTGGCTATGTCTGAAATAACGGTTGTTGGAACAAGACGTCAGATTGTCATTAACGAGGCCATTGATCTTGCAAAACGATTCTGTGATGGAGCAGCCCCTCGTATTATTAATGGGTGCCTAAGGACCTTTGTGAAGGACATTAAAGAAATTGATTCAACTTATGCTCGAGAGAAGCAAGAAGTAGCCGGTGCACGACTCTGA

Protein sequence

MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL

Homology

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BLAST of Moc02g00140 vs. NCBI nr
Match: XP_022153810.1 (uncharacterized protein LOC111021236 [Momordica charantia])

HSP 1 Score: 592.4 bits (1526), Expect = 2.1e-165
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRAST 60
           MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRAST
Sbjct: 1   MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRAST 60

Query: 61  SFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFE 120
           SFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFE
Sbjct: 61  SFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFE 120

Query: 121 KRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAP 180
           KRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAP
Sbjct: 121 KRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAP 180

Query: 181 PKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEI 240
           PKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEI
Sbjct: 181 PKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEI 240

Query: 241 TVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL 300
           TVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL
Sbjct: 241 TVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL 300

[Close]

BLAST of Moc02g00140 vs. NCBI nr
Match: XP_022948088.1 (uncharacterized protein LOC111451776 [Cucurbita moschata])

HSP 1 Score: 463.4 bits (1191), Expect = 1.5e-126
Identity = 235/280 (83.93%), Postives = 253/280 (90.36%), Query Frame = 0


Query: 19  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST 78
           RPNF+ SS +SGICR  FP SA VPYVK+SVPHLC QASLRASTSF +NSV  ES S+  
Sbjct: 21  RPNFHFSSPVSGICRFPFPTSAIVPYVKESVPHLCPQASLRASTSFSKNSVGKESSSVLV 80

Query: 79  SSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKA 138
           SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPVRLFEKRLNAR EPGYEFDK 
Sbjct: 81  SSIEPIPKIDKSGRFCSPRAARELALSIIYASCLEGSDPVRLFEKRLNARLEPGYEFDKT 140

Query: 139 SLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKL 198
           SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKL
Sbjct: 141 SLMEYNHMSFGGPPVTVETAEEADELLRKDEKDSAIEAEILAAPPKVVYSKLILRFTRKL 200

Query: 199 LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAID 258
           LVAVVDRWD+HVLKI+ VIPSTWK KPAGRILELCILHLAMSEITVVGTR QIVINEA+D
Sbjct: 201 LVAVVDRWDSHVLKIDKVIPSTWKDKPAGRILELCILHLAMSEITVVGTRHQIVINEAVD 260

Query: 259 LAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA 297
           LAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Sbjct: 261 LAKRFCDGAAPRIINGCLRTFVKDIQETDSTHARVKEVVS 300

[Close]

BLAST of Moc02g00140 vs. NCBI nr
Match: XP_023007062.1 (uncharacterized protein LOC111499665 [Cucurbita maxima])

HSP 1 Score: 460.3 bits (1183), Expect = 1.3e-125
Identity = 234/280 (83.57%), Postives = 252/280 (90.00%), Query Frame = 0


Query: 19  RPNFNLSSHISGIC--RFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST 78
           RPNF+ SSH+SGIC   FP SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  
Sbjct: 21  RPNFHFSSHVSGICCFPFPTSAIVPYVKESVPLLCPQASLRASTSFSKNSVGKESSSVLV 80

Query: 79  SSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKA 138
           SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPVRLFEKRLNAR EPGYEFDK 
Sbjct: 81  SSIEPIPKIDKSGRFCSPRAARELALSIIYASCLEGSDPVRLFEKRLNARLEPGYEFDKT 140

Query: 139 SLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKL 198
           SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKL
Sbjct: 141 SLMEYNHMSFGGPPVTVETAEEADELLRKDEKDSAIEAEILAAPPKVVYSKLILRFTRKL 200

Query: 199 LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAID 258
           LVAVVDRWD+HVLKI+ VIPSTWK KPAGRILELCILHLAMSEITVVGTR QIVINEA+D
Sbjct: 201 LVAVVDRWDSHVLKIDKVIPSTWKDKPAGRILELCILHLAMSEITVVGTRHQIVINEAVD 260

Query: 259 LAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA 297
           LAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Sbjct: 261 LAKRFCDGAAPRIINGCLRTFVKDIQETDSTHARVKEVVS 300

[Close]

BLAST of Moc02g00140 vs. NCBI nr
Match: KAG6605513.1 (hypothetical protein SDJN03_02830, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035451.1 nusB [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 460.3 bits (1183), Expect = 1.3e-125
Identity = 234/280 (83.57%), Postives = 252/280 (90.00%), Query Frame = 0


Query: 19  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST 78
           RPNF+ SS +SGICR  FP SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  
Sbjct: 21  RPNFHFSSPVSGICRFPFPTSAIVPYVKESVPRLCPQASLRASTSFSKNSVGKESSSVLV 80

Query: 79  SSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKA 138
           SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPVRLFEKRLNAR EPGYEFDK 
Sbjct: 81  SSIEPIPKIDKSGRFCSPRAARELALSIIYASCLEGSDPVRLFEKRLNARLEPGYEFDKT 140

Query: 139 SLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKL 198
           SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKL
Sbjct: 141 SLMEYNHMSFGGPPVTVETAEEADELLRKDEKDSAIEAEILAAPPKVVYSKLILRFTRKL 200

Query: 199 LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAID 258
           LVAVVDRWD+HVLKI+ VIPSTWK KPAGRILELCILHLAMSEITVVGTR QIVINEA+D
Sbjct: 201 LVAVVDRWDSHVLKIDKVIPSTWKDKPAGRILELCILHLAMSEITVVGTRHQIVINEAVD 260

Query: 259 LAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA 297
           LAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Sbjct: 261 LAKRFCDGAAPRIINGCLRTFVKDIQETDSTHARVKEVVS 300

[Close]

BLAST of Moc02g00140 vs. NCBI nr
Match: XP_023532267.1 (uncharacterized protein LOC111794466 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459.9 bits (1182), Expect = 1.7e-125
Identity = 233/280 (83.21%), Postives = 252/280 (90.00%), Query Frame = 0


Query: 19  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST 78
           RPNF+ SSH+SGICR  FP SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  
Sbjct: 21  RPNFHFSSHVSGICRFPFPTSAIVPYVKESVPRLCPQASLRASTSFSKNSVGKESSSVLV 80

Query: 79  SSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKA 138
           SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPVRLFEKRLNAR EPGYEFDK 
Sbjct: 81  SSIEPIPKIDKSGRFCSPRAARELALSIIYASCLEGSDPVRLFEKRLNARLEPGYEFDKT 140

Query: 139 SLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKL 198
           SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA +LAAPPK+VYSKLILRF+RKL
Sbjct: 141 SLMEYNHMSFGGPPVTVETAEEADELLRKDEKDSAIEAEVLAAPPKVVYSKLILRFTRKL 200

Query: 199 LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAID 258
           LVAVVDRWD+HVLKI+ VIPSTWK KPAGRILEL ILHLAMSEITVVGTR QIVINEA+D
Sbjct: 201 LVAVVDRWDSHVLKIDKVIPSTWKDKPAGRILELSILHLAMSEITVVGTRHQIVINEAVD 260

Query: 259 LAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA 297
           LAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Sbjct: 261 LAKRFCDGAAPRIINGCLRTFVKDIQETDSTHARVKEVVS 300

[Close]

BLAST of Moc02g00140 vs. ExPASy Swiss-Prot
Match: Q18B61 (Transcription antitermination protein NusB OS=Clostridioides difficile (strain 630) OX=272563 GN=nusB PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.4e-05
Identity = 29/79 (36.71%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 205 DNHVLKIENVIPSTWKSKPAGRI--LELCILHLAMSEITVVGTRRQIVINEAIDLAKRFC 264
           +NH  KI+ +I    K+    R+  +++ IL L++ EI  + T  ++ INEA++LAK +C
Sbjct: 90  ENHD-KIDELINKHAKNWTVDRMPKVDVSILRLSVCEILYLDTPNKVSINEAVELAKIYC 149

Query: 265 DGAAPRIINGCLRTFVKDI 282
           D  +P+ ING L + V +I
Sbjct: 150 DDKSPKFINGILGSVVDEI 167

[Close]

BLAST of Moc02g00140 vs. ExPASy Swiss-Prot
Match: B1WXY6 (Transcription antitermination protein NusB OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=nusB PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.8e-05
Identity = 29/86 (33.72%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 197 LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAID 256
           L+  ++R    + +    +   W+ K   +I +  IL LA++EI  +    ++ INEA++
Sbjct: 123 LIGTINRRRKEIDEQLEAVLKDWQLKRLAKI-DQDILRLAVAEILFLDVPEKVSINEAVE 182

Query: 257 LAKRFCDGAAPRIINGCLRTFVKDIK 283
           LAKR+ D    R ING LR F   IK
Sbjct: 183 LAKRYSDDDGYRFINGVLRRFTDHIK 207

[Close]

BLAST of Moc02g00140 vs. ExPASy Swiss-Prot
Match: A6QBK6 (Transcription antitermination protein NusB OS=Sulfurovum sp. (strain NBC37-1) OX=387093 GN=nusB PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.8e-05
Identity = 31/83 (37.35%), Postives = 43/83 (51.81%), Query Frame = 0


Query: 192 FSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVI 251
           FS  L    ++  +    +IE  + + W     GR+ E  IL L   EI V  T R I+I
Sbjct: 45  FSHDLFDGTIENLEMLDAEIEKHL-TDWDYDAIGRV-EKAILRLGAYEILVAKTDRAIII 104

Query: 252 NEAIDLAKRFCDGAAPRIINGCL 275
           NEA++LAK   D  +P+ ING L
Sbjct: 105 NEAVELAKSLADEKSPQFINGVL 125

[Close]

BLAST of Moc02g00140 vs. ExPASy Swiss-Prot
Match: Q8DKS0 (Transcription antitermination protein NusB OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=nusB PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.8e-05
Identity = 26/79 (32.91%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 197 LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAID 256
           L+  + R+ N + ++ N     W+ +   + L+  I+ +A+ E+  +   +Q+ INEAI+
Sbjct: 120 LLRCLQRYQNEIEELVNRSMVDWQLERLTQ-LDRAIIEIAVVEMRYLEVAKQVAINEAIE 179

Query: 257 LAKRFCDGAAPRIINGCLR 276
           LAKR+ D  + R ING LR
Sbjct: 180 LAKRYSDEGSHRFINGVLR 197

[Close]

BLAST of Moc02g00140 vs. ExPASy Swiss-Prot
Match: A7GWZ7 (Transcription antitermination protein NusB OS=Campylobacter curvus (strain 525.92) OX=360105 GN=nusB PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.9e-05
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 210 KIENVIPSTWKSKPAGR--ILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAP 269
           +++ ++    K K   R  I+EL IL L + E+   GT + ++INEAI+LAK     +AP
Sbjct: 58  ELDEILKPYLKEKDIERIGIVELAILRLGVYEMKFTGTDKAVIINEAIELAKELGGDSAP 117

Query: 270 RIINGCL 275
           + ING L
Sbjct: 118 KFINGVL 124

[Close]

BLAST of Moc02g00140 vs. ExPASy TrEMBL
Match: A0A6J1DHW5 (uncharacterized protein LOC111021236 OS=Momordica charantia OX=3673 GN=LOC111021236 PE=3 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.0e-165
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRAST 60
           MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRAST
Sbjct: 1   MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRAST 60

Query: 61  SFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFE 120
           SFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFE
Sbjct: 61  SFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFE 120

Query: 121 KRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAP 180
           KRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAP
Sbjct: 121 KRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAP 180

Query: 181 PKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEI 240
           PKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEI
Sbjct: 181 PKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEI 240

Query: 241 TVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL 300
           TVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL
Sbjct: 241 TVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL 300

[Close]

BLAST of Moc02g00140 vs. ExPASy TrEMBL
Match: A0A6J1G8E0 (uncharacterized protein LOC111451776 OS=Cucurbita moschata OX=3662 GN=LOC111451776 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 7.3e-127
Identity = 235/280 (83.93%), Postives = 253/280 (90.36%), Query Frame = 0


Query: 19  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST 78
           RPNF+ SS +SGICR  FP SA VPYVK+SVPHLC QASLRASTSF +NSV  ES S+  
Sbjct: 21  RPNFHFSSPVSGICRFPFPTSAIVPYVKESVPHLCPQASLRASTSFSKNSVGKESSSVLV 80

Query: 79  SSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKA 138
           SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPVRLFEKRLNAR EPGYEFDK 
Sbjct: 81  SSIEPIPKIDKSGRFCSPRAARELALSIIYASCLEGSDPVRLFEKRLNARLEPGYEFDKT 140

Query: 139 SLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKL 198
           SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKL
Sbjct: 141 SLMEYNHMSFGGPPVTVETAEEADELLRKDEKDSAIEAEILAAPPKVVYSKLILRFTRKL 200

Query: 199 LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAID 258
           LVAVVDRWD+HVLKI+ VIPSTWK KPAGRILELCILHLAMSEITVVGTR QIVINEA+D
Sbjct: 201 LVAVVDRWDSHVLKIDKVIPSTWKDKPAGRILELCILHLAMSEITVVGTRHQIVINEAVD 260

Query: 259 LAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA 297
           LAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Sbjct: 261 LAKRFCDGAAPRIINGCLRTFVKDIQETDSTHARVKEVVS 300

[Close]

BLAST of Moc02g00140 vs. ExPASy TrEMBL
Match: A0A6J1KXJ4 (uncharacterized protein LOC111499665 OS=Cucurbita maxima OX=3661 GN=LOC111499665 PE=3 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 6.2e-126
Identity = 234/280 (83.57%), Postives = 252/280 (90.00%), Query Frame = 0


Query: 19  RPNFNLSSHISGIC--RFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST 78
           RPNF+ SSH+SGIC   FP SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  
Sbjct: 21  RPNFHFSSHVSGICCFPFPTSAIVPYVKESVPLLCPQASLRASTSFSKNSVGKESSSVLV 80

Query: 79  SSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKA 138
           SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPVRLFEKRLNAR EPGYEFDK 
Sbjct: 81  SSIEPIPKIDKSGRFCSPRAARELALSIIYASCLEGSDPVRLFEKRLNARLEPGYEFDKT 140

Query: 139 SLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKL 198
           SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKL
Sbjct: 141 SLMEYNHMSFGGPPVTVETAEEADELLRKDEKDSAIEAEILAAPPKVVYSKLILRFTRKL 200

Query: 199 LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAID 258
           LVAVVDRWD+HVLKI+ VIPSTWK KPAGRILELCILHLAMSEITVVGTR QIVINEA+D
Sbjct: 201 LVAVVDRWDSHVLKIDKVIPSTWKDKPAGRILELCILHLAMSEITVVGTRHQIVINEAVD 260

Query: 259 LAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA 297
           LAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Sbjct: 261 LAKRFCDGAAPRIINGCLRTFVKDIQETDSTHARVKEVVS 300

[Close]

BLAST of Moc02g00140 vs. ExPASy TrEMBL
Match: A0A5D3DDJ4 (NusB/RsmB/TIM44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001130 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.2e-124
Identity = 232/279 (83.15%), Postives = 248/279 (88.89%), Query Frame = 0


Query: 19  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST 78
           RPNF+ S+HISGIC+FP  AS+ VP+VK+S+P LC QASLRASTSF EN V  E  SIS 
Sbjct: 77  RPNFHFSNHISGICQFPFHASSIVPHVKNSMPRLCCQASLRASTSFPENRVAEERSSISV 136

Query: 79  SSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKA 138
           SS E IPK+DK+G+ CSPRAARELALSIVYAACLEGSDPVRLFEKRLN+RRE GYEFDK 
Sbjct: 137 SSIETIPKIDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNSRRESGYEFDKT 196

Query: 139 SLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKL 198
           SLM YNHMSFGGPPVTVET EEADELLRKDE+D  IEA ILAAPPKMVYSKLILRF+RKL
Sbjct: 197 SLMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKMVYSKLILRFTRKL 256

Query: 199 LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAID 258
           LVAVVD WDN  LKIE VIP TWK+KPAGRILELCILHLAMSEITV+GTR QIVINEA+D
Sbjct: 257 LVAVVDGWDNRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVD 316

Query: 259 LAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEV 296
           LAKRFCDGAAPRIINGCLRTFVKDIKE DST AREKQEV
Sbjct: 317 LAKRFCDGAAPRIINGCLRTFVKDIKETDSTPAREKQEV 355

[Close]

BLAST of Moc02g00140 vs. ExPASy TrEMBL
Match: A0A1S3BNR2 (uncharacterized protein LOC103491638 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491638 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.2e-124
Identity = 232/279 (83.15%), Postives = 248/279 (88.89%), Query Frame = 0


Query: 19  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST 78
           RPNF+ S+HISGIC+FP  AS+ VP+VK+S+P LC QASLRASTSF EN V  E  SIS 
Sbjct: 114 RPNFHFSNHISGICQFPFHASSIVPHVKNSMPRLCCQASLRASTSFPENRVAEERSSISV 173

Query: 79  SSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKA 138
           SS E IPK+DK+G+ CSPRAARELALSIVYAACLEGSDPVRLFEKRLN+RRE GYEFDK 
Sbjct: 174 SSIETIPKIDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNSRRESGYEFDKT 233

Query: 139 SLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKL 198
           SLM YNHMSFGGPPVTVET EEADELLRKDE+D  IEA ILAAPPKMVYSKLILRF+RKL
Sbjct: 234 SLMEYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKMVYSKLILRFTRKL 293

Query: 199 LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAID 258
           LVAVVD WDN  LKIE VIP TWK+KPAGRILELCILHLAMSEITV+GTR QIVINEA+D
Sbjct: 294 LVAVVDGWDNRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEAVD 353

Query: 259 LAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEV 296
           LAKRFCDGAAPRIINGCLRTFVKDIKE DST AREKQEV
Sbjct: 354 LAKRFCDGAAPRIINGCLRTFVKDIKETDSTPAREKQEV 392

[Close]

BLAST of Moc02g00140 vs. TAIR 10
Match: AT4G26370.1 (antitermination NusB domain-containing protein )

HSP 1 Score: 321.6 bits (823), Expect = 6.6e-88
Identity = 177/305 (58.03%), Postives = 218/305 (71.48%), Query Frame = 0


Query: 1   MEGASLLFCLSCYSSPC-FRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRAS 60
           MEG     CL   S+ C F  N +  SH     R      V  ++ +        + R+S
Sbjct: 1   MEGTFSPLCLRSSSNLCYFSSNVSPDSH-----RSIGFTLVDSLRPTNLVSLRTGNKRSS 60

Query: 61  TSFLENSVTGESDSIST---SSKEI----IPKVDKTGRLCSPRAARELALSIVYAACLEG 120
           +S L   ++    ++ T   S++E+    +PK+DK+GRL SPRAARELAL I+YAACLEG
Sbjct: 61  SSSLRLFLSPTRSALRTPTISAEEVKDVPMPKIDKSGRLSSPRAARELALVILYAACLEG 120

Query: 121 SDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAI 180
           SDP+RLFEKR+NARREPGYEFDK+SL+ YNHMSFGGPPV  ET EE DEL+R DEK+  I
Sbjct: 121 SDPIRLFEKRINARREPGYEFDKSSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKI 180

Query: 181 EAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCI 240
           EA +L+APPK+VYSKL+LRF++KLL AVVD+WD+HV+ IE + P  WKS PAGRILE  I
Sbjct: 181 EAEVLSAPPKLVYSKLVLRFAKKLLAAVVDKWDSHVVIIEKISPPDWKSAPAGRILEFSI 240

Query: 241 LHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYARE- 297
           LHLAMSE+ V+ TR  IVINEA+DLAKRFCDG+APRIINGCLRTFVKD     +  A E 
Sbjct: 241 LHLAMSEVAVLETRHPIVINEAVDLAKRFCDGSAPRIINGCLRTFVKDRATTSTPQALEL 300

[Close]

BLAST of Moc02g00140 vs. TAIR 10
Match: AT4G26370.2 (antitermination NusB domain-containing protein )

HSP 1 Score: 152.1 bits (383), Expect = 6.9e-37
Identity = 91/185 (49.19%), Postives = 119/185 (64.32%), Query Frame = 0


Query: 1   MEGASLLFCLSCYSSPC-FRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRAS 60
           MEG     CL   S+ C F  N +  SH     R      V  ++ +        + R+S
Sbjct: 1   MEGTFSPLCLRSSSNLCYFSSNVSPDSH-----RSIGFTLVDSLRPTNLVSLRTGNKRSS 60

Query: 61  TSFLENSVTGESDSIST---SSKEI----IPKVDKTGRLCSPRAARELALSIVYAACLEG 120
           +S L   ++    ++ T   S++E+    +PK+DK+GRL SPRAARELAL I+YAACLEG
Sbjct: 61  SSSLRLFLSPTRSALRTPTISAEEVKDVPMPKIDKSGRLSSPRAARELALVILYAACLEG 120

Query: 121 SDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAI 178
           SDP+RLFEKR+NARREPGYEFDK+SL+ YNHMSFGGPPV  ET EE DEL+R DEK+  I
Sbjct: 121 SDPIRLFEKRINARREPGYEFDKSSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKI 180

The following BLAST results are available for this feature:

BLAST of Moc02g00140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153810.1	2.1e-165	100.00	uncharacterized protein LOC111021236 [Momordica charantia]	[more]
XP_022948088.1	1.5e-126	83.93	uncharacterized protein LOC111451776 [Cucurbita moschata]	[more]
XP_023007062.1	1.3e-125	83.57	uncharacterized protein LOC111499665 [Cucurbita maxima]	[more]
KAG6605513.1	1.3e-125	83.57	hypothetical protein SDJN03_02830, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023532267.1	1.7e-125	83.21	uncharacterized protein LOC111794466 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc02g00140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q18B61	1.4e-05	36.71	Transcription antitermination protein NusB OS=Clostridioides difficile (strain 6...	[more]
B1WXY6	1.8e-05	33.72	Transcription antitermination protein NusB OS=Crocosphaera subtropica (strain AT...	[more]
A6QBK6	6.8e-05	37.35	Transcription antitermination protein NusB OS=Sulfurovum sp. (strain NBC37-1) OX...	[more]
Q8DKS0	6.8e-05	32.91	Transcription antitermination protein NusB OS=Thermosynechococcus elongatus (str...	[more]
A7GWZ7	8.9e-05	38.81	Transcription antitermination protein NusB OS=Campylobacter curvus (strain 525.9...	[more]

BLAST of Moc02g00140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHW5	1.0e-165	100.00	uncharacterized protein LOC111021236 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1G8E0	7.3e-127	83.93	uncharacterized protein LOC111451776 OS=Cucurbita moschata OX=3662 GN=LOC1114517...	[more]
A0A6J1KXJ4	6.2e-126	83.57	uncharacterized protein LOC111499665 OS=Cucurbita maxima OX=3661 GN=LOC111499665...	[more]
A0A5D3DDJ4	1.2e-124	83.15	NusB/RsmB/TIM44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G0011...	[more]
A0A1S3BNR2	1.2e-124	83.15	uncharacterized protein LOC103491638 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Moc02g00140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26370.1	6.6e-88	58.03	antitermination NusB domain-containing protein	[more]
AT4G26370.2	6.9e-37	49.19	antitermination NusB domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035926	NusB-like superfamily	GENE3D	1.10.940.10		coord: 94..292 e-value: 2.4E-19 score: 71.6
IPR035926	NusB-like superfamily	SUPERFAMILY	48013	NusB-like	coord: 92..282
IPR006027	NusB/RsmB/TIM44	PFAM	PF01029	NusB	coord: 193..279 e-value: 2.0E-10 score: 41.1
IPR011605	NusB antitermination factor	PANTHER	PTHR11078	N UTILIZATION SUBSTANCE PROTEIN B-RELATED	coord: 49..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc02g00140.1	Moc02g00140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0031564	transcription antitermination
biological_process	GO:0006353	DNA-templated transcription, termination
molecular_function	GO:0003723	RNA binding