Moc01g34880 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g34880
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr1: 24715772 .. 24722756 (-)
RNA-Seq Expression	Moc01g34880
Synteny	Moc01g34880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGCGACTGCGAGGCGCGACAGGCGGTTGCACGCCGTACATGCGATGGCAAGGGAGACGCCCCTCCACTCCCACGATACGGGGGCATGCCGAGCTCCGCCACCTGTAAGTGGCAATCGGCAGATCCCAGGCGTGCAGGTGGAGGCACCACCTACCAATTGTTGTGAGTGTACACTCCTGACAAGAACCGTACAACTCATTTGTTTCATCGTCCTTCCTGGTCGGCCATCCGAACTTATAAAATGGAACGACACTCACGTTTACCAGACAAGTGAAGAACCGGTCAGTATTAAAGGTGGCTTTCCTATCTTTATTCCAACTTCTAACTTCGTTGTCAGAGTGTATTAAGTGGGACACCGCACCAGCGTCGACTTTTCTGTTTGCATGCTCATTTGTTCCTTGGCGACACTGTGGACCTCTCCAAACATTTGCCGTCAACGTATATAGTTCTATTTAATTGAATCCTGCCAATATGTAGTTGGTTTTTTCACAACCATATAAAAGAATATATAGCCGGAGCGTAAATTTTACTGCGAGGCTTGTAGAATATCTCGCATCAGAAAGCAATTGCAAATAGTACCTGCTTGTTTTAGCTATAAATTGAGGGGGTCGAAGTCATCGTAAACTGTCAATGTTCCAATAATCTCAACGGGTTCCTCCCTTTATTTATCTTCAGCATTTTTGCTCCCTCCATGGGTTGGGCATTCTCACTTAAGATCCGTTTAACAGTAGACGAGGCACTGGTGATATTGTTGACAGAAGAGAGAGAGCACAGATGACGAAATGCATTTATAGTTGCTTGGCATCTCGATTCTTTGTGCTCTCTGCTCTCCTGTCATCACCTTTAGCCTCTCGCTTGGAATCGGGCCGGTAACTCTCTCTCTCTCTCTCTCTGTACGCATCGGTATCATACAAAGTGTGCGTATCAACGATATAAATCAAATAACTTAATTCTATCCTGCTTTTGCCTTGAGTTCAAATCATAGTCAGCATTTGGTGCTTTGTTACATTTTCTTCTTGTGAGTTTATTACAAAAACATTCGAGTTATATATATTTCTTACATTAAACTTTCATGATTTATTCACAAGGATTCACTGTTATTTTTCTTCCAAATATTTGGTGGAAAGCAGATAGATTCTCACGTATTAGATTTACTATTCAAGAAAGACGCAGCACTACTACCCTGGCCATCTCAAATTAGCCAGGAGTGAAGATTATTTTTATTTATTTTTTAATGTAGCATTTTAAAATTGCCAGTCGTGCTGAACATACTCGTGAATAAGCTTAATACCAACATGATTTTAATGTGGAATGGAATGGTCAGAATGGAAGTGATTTACACGCGCGCAGCTCAATAACTCCTATTTGCTGAATAAGGCTACATTGGAGACGGTATTAAAGCACCAGCCACATTATACGAGCTCCATCCGAGAGTTAGAGTGGTCAGAATGGAATGAAGTAGCACACAGCAGTTACAAAAAATAGTGAGAGAATAAAATTTTAGCCTTAAACACTGGTTGTATTAATTTTTAAGCTTAACTTTTAATTTTATCAAAATAAATCTTAAACATAGATTATTGTTGCAATTTTAACTCTCAATCAATTTCAACCTTATTCAACCAACAATTTTAACCAACAATAATAATGTAAAAAATCCTATAGACTTACTAATTTAATGAAAACAAAATTTGGCACAAAATTAAGTGAGATTAATAGATAAATGGATCATTAAGTAACCTTACCAAAACTTACAAATTTGAATTAAAAAAAAGATAAAAAATCTAATCTCGTATTAATCTGAATACTAGCAACTTTCATACCAAATAATATATTTTATAATTTATTTAATGCATATGAGAATTTTTTTCAACAAATTTTGGAATGATAATAGAAATGGAGGTTTAAAAATTACAACATTTTTGAAGTTTGTGAAATTATAACATTTATTTAGTGCACTATGATGAAATATAAATTCATTTACCATAAAAATTGATATATTTTGTTGACTTGGGGTTAAATTTGACTTTTTCCAAAATAGTATAATGTATACAAATTTTATTAGTATAAATTACTTTTAAAAACTGTGACAACGTTTTTTCTTTAAATATATTATAAGTATGACGTTTTCTTAATTAATGTGTTTTATATTACAGATTTGAGTCTCATTTATTGTTATGCCATCCTTTAAAGTTTAAAAAATATAAAGTTAAATTACAAGTTTATGCATTGAAGTTTTAGATTATTGTCAAATAAGGTGTATAATAGATTAATGAATTTTTTATTTTATGTCTATAAAAAGACACTGAATAGAAAATTTCTAATAAATCCATAAATTTCGGTTTAGGTACCTGAAATTAAAATTTTTTTGTTTAATATAAGTTTGACCTATTTGAAAGTTTTAAGATCGGCAAATATATTAGACACAAAAATTTAAAATTTAGGATTCAATTAGACACACGATTCAATTTTATGTCTATTATATATTGGTTAATTTTGAAAAATGTGTATAGGTTATGGATCTATTTCATACTTTTTAAAGTCTACAGATTTATTAATTAGATATAAAATTGATACTTCGGAATCCAGTGTGGCTTCTACAATTTGATCCTTATAACCAGGAGTGTCTGACGACTACCTAATACTGTAATCAACATTGTGAGACTCGTCTCTATAGGACGAAGTCCCAGTACGCGCTTTGCATAGGGAGAAGTCCCGGTAGGTCCCTATAGGGATATCCCCATTCGACCATAAGCCTACTATGCCACCACCCACGGTGGTTAATTAGATATAAAATTGAATGTTTGGAACATAATTTTTAATATTTAGAGATGAATTAAATACAAACATATAAGTTAAGTGGCTCAGCATATAATTTAACTTATTTATAAAATACATATATTTATTTTATTTTATGTTATTCATATAAGTACCCCAAACATATATTATAAAAGAATTGAACCACTAGAAACGAGATTCATGTTAAGGATCCCACATTGAAAAGAGAGGGGACCTAACATAGATTATAATAGACATGAGCTATTCCTTTCATTGTCAATTGGTTATGAGATGGAACCCATGAATATTGATATGGTATCGGAGTCCAAAACGCTCAAACGACAACCTGGTTAGGGGACATGTTAAGCATCCCACATTGAAAACAGATGGGACCTTGAACCTGATTGGCCTACCAACGTGTCCACTTGTGACTATTCTATTTATTTTCCTTTAACTAAGAATAATTGCCGTCAAAAGAAAAAAAAAACTTTAGAATAATCAAATAATATATATATACATTCAAAATTTGAAGTATGGTGTTGACGAAAAGTTGGAATGAAATATACATCCTCTAGACTCCTAGAATAAGTAAATCGGGGTCATATTATCCAGTAATTTGGTTTTCATTCTTTTACGGAAATCGGATAGAAGTGAAAGGACTCTATTTCACTTTTCTGTCAGAAACTTTAAATAGTGTACAAAATTTGTGTGTAACATATTTCTAATTTTTTAAAAAAATTTAATAAAACTTCTAAACTTTCTATTTTTTATTTAATAAAATTCTAATATGTTTGATATTTTTCTTCTAGTTCATAGATCTACTTGATCTAATTTAAATTTGTGCCTAAAATGTATGCGGGTGTTGATGCTATTTTCTGTCGAGCTCGAAGGTCGGGTCATGGGCTAACGAGGACGAGCTCCGAGGTGCGATCTCGATGAAACCTACATAGGGAACAAATACTTTGACGCCCAAGTTAGTGTGAGCTCGAACTGTATCAAGTCGTTCTCGGAGGAATTGCATACTTGAGACTTCGTTGGAGTGTCCCTTTTATAGGTAGGCAGGGGAGACAAAGTCGTTGGTGCTGTTACTACCCATGGCTACGGCAGTCGGGCCCCCATGTCAGTGGTCAGGCCTGAGCTTGGATTCCTCGGGACGGCGTGTATAACTTTCATGATCTTAGTTCGACATGGATCAGGTCGGTGCGTACGGATGACCTATTTTCTACCTCTTGACAACTCCGAACTGAGCAGGAGATGACACTTGTCGATTCAAATTTTGAACACCAACATTGGCTTCTTCTCTGGCAAAGCCGAGCTACGGTTTGATAGAGGAGTTAGAAAGTAATAAGAATAGTTTTGTGAACCAACCTATTATGGCGCGAGTTTAGTTGATTTTTAATCGTCCTAACATAACGTGGAGCATCGTTCTGACAAGGGAACACACGTGCATTGTTTTTCCGTGCTTCGTGGTGCGACATGGGTCGTTCAACGGTGCGTATGTGGACGGCTAGGATTGTTTCTGGAACCCTATATATAGGATCCCCCTCAGGTCTTCATTTTTCACGGTTTCGAACCTTTTTGCTCTCGCACCGAATTGAGTTGGATATCGCTCCCGTCTAGAGGTCAGTTATTTCTTTAGCTTTTTTTGCTTTTTGTGATATGTAGAGAGTAGATACTTGCAAACGTAGTTTAGGGAGCGGCATGCATATCATCTAATTGTCATGTTGTTCTAGCTTAGACTAGATGCTAATACCTAGAGGTCATAAGAAAATACTTAGAAGTGAGGTTATCCATCCAAGCACAGCAGGGGCGTATTGGACTTTATTAAGGCAAAATATGAGATCCCAGATTACATAGGCATTAGGTATCCAAAGCGAGGTAAGACTTTGGAAGAACCACCAGCTGAACACGTCGAGTTCTACCTGAGGAAGTTTGAGTTCGGTGTGCGTCTTCCTTTTCCAATCTTTACTCAAGAATTTTTGAATGCGGTAAACTTGGCACAAGCTCAGCTCACTCCTAGTGGATGAGGCATGCTATACGGGTGTTATAACATGTGGTGGAAGGAGAGTCAGTGGAGAGAACGTGAGGGTTTGCATCCTACCGAGTTGCTCACTGTCGATCAGATGTACAGTACTCATACTTTAAAAAGCATGCCCAAAGTAGAGTATAGGCATTATTTTTGTACTCGTCTTGGGACTAGTGTAATGATCAAAGGTCATTCCTCAATAAAATATTGAAGGGCCAGTGGTTTTACGTCAATGGCGAGTGGCTTGTGAATAATGAGTATGGGGAGCCATTCCATGTGGTGTCGAGTAGTTTCAGCAACCTAGATAAGAGCTCCGACCTGTAGTTCAGCATTTTGCTACTTTGGTCTACTTCTAACTCCTGTTTCTCTTGCAGTAACGCCCAAACCACTCCCCAAAGGGACCTACCTTACGAAGTCGTACCTGAAGGCTATTAAGTAGATCGGCGTGAACAAGCACACTTCAAAGTCCCTAATCACTGACACAACACTTATAAAGTACGGTCTATACGAGTTCTTTGGCGATAGCTCAGATTCATAAGCCTAATTAACTCATTCAGGTAGGTTAGCTATTCTTTTCGTTTCCACTCTACACTAATTATTTTTGCTTTGTAGTGGCAGAGATGCTTCCTCAGATCTTCAACAGAGTAAAAATGTCCGAGGAGAAGGAGGCCAGCTCAGCTCAAGCTGGCACCGCGAAGAGTGCTTCAGCACAGAAAGTAGTTCTTGAGATTATTGTTATTGATGGTGATGTCGTCGTTCCTCCTGCTCCTAAGGTCAGATCCTCCCCCAAGAATAAAAAGAATAAAGAGGGGAATGAGAAGAAGGAGAAGAAGGAAAAAGCTGAGAAGAGGGGTCGCAAAGTCGTCTTTTCTAATAAGATGGGGAGCCCTCTACTAAGAGAGCTCAACTAGAGGCCTGTTAGAACTTCAATTTTCACATCTGCACCAACACACTGAGCGACCGAATCAAGGCGGCTGTACAGGAGGTCGCTAAGGGATGCTTAGCAAGGTCAACTCAAAGACAACACTTGGTAATGATGCCTACAGCGGGCAACATTCAAAGAGATATGTACGTCGTAGCTGATGTAAGTCTCCACATATTTTTTTTATATACTCTCATGAGTAGCTTCGCGACCTAACCTGATGTTGCTTGTTCTTTTGTAGGCTGTCATGATGGTCTGCCAAACTACTGCGCAGATAAAGCTCGAGCTGGACTGGCGTGATAAGCTGTTGTGTGTTGACAAATAGTCGTGCAAAACCGCACTACTAGACGTCAAGGTCAGTAGGGACAAGGTGGTGCGGCTTAATACTGATATGCGGGCTGCAAATGAGACGATGGCCGAGATGAGTGAATAGGTGGCAAGGTGTAAGGCCATTATGAAGGAGGTCATGAAAAGGCTGCACAAATATGAGGAGTTAGAGGCCAAGTCCCTCTCCCTTGAGCGCGACCTGGAAACTATACACACTTAGAAAGAGGTCATTCGAAAAGAGCTCAGTGACCTGCAGGCCAATCTTAAGGATGAAAAGTTCGTTGAAGGCATCTTTAAAGAGACTTCAACCTATACTTCCTTTGCCAAGGATCTTATGGATATCGGGCTTAAGTTCGTTTTAATAGAGTTGAAGAGGACTCATCCCGAGCTCGTTCTGTCCGAAATGAAGCAGATCTACGTGGAGTGTGGACCACTCTTCCACAAAAGACAAAGGACCCTAAAGAAGTCATCGCCAAGTATATGAAGGAGCTTTTCTCTTATGAGAGAGTTGTAGATATCGTTGGGACGAGCTCTGAAGAGAATCAAGATCCTCCTCAAGCACAGCTTATTCACGGCTCATCTCCTTTTTACTTTCAGCTTTTTGGAATTCACCCTCTCAGGTCGAGGCCTATACACTTCAACCTTTTGTATTTTGAATATAAAAATGAAATGAAAGTCTTGTTTTCTTCTCATTTTCATTTTGTTTATTTTTATTATACTTCTGCATTTACCAATTGATTGAGGTCAGACTTGTAGAGCACTCACTCACTTGGGAGTTGTAATGTGGTTTTTTTTATATTTTGTTTTACATCTTATTTTAGCTCACTTCATTGAAGTATCCAATATAAGACAACTAACTGAGTTTAACGAGGTCGCTACTCACTTAGTTTGGAAAGAGTTCTTAGCTCAGTATGATGTAGATAAAGCGTAG

mRNA sequence

ATGTCCGCGACTGCGAGGCGCGACAGGCGGTTGCACGCCGTACATGCGATGGCAAGGGAGACGCCCCTCCACTCCCACGATACGGGGGCATGCCGAGCTCCGCCACCTGTAAGTGGCAATCGGCAGATCCCAGGCGTGCAGGTGGAGGCACCACCTACCAATTGTTGTGAGTGTACACTCCTGACAAGAACCGTACAACTCATTTGTTTCATCGTCCTTCCTGGTCGGCCATCCGAACTTATAAAATGGAACGACACTCACGTTTACCAGACAAGTGAAGAACCGGTAGGCAGGGGAGACAAAGTCGTTGGTGCTGTTACTACCCATGGCTACGGCAGTCGGGCCCCCATGTCAGTGGTCAGGCCTGAGCTTGGATTCCTCGGGACGGCGTGTATAACTTTCATGATCTTAGTTCGACATGGATCAGTGGCAGAGATGCTTCCTCAGATCTTCAACAGAGTAAAAATGTCCGAGGAGAAGGAGGCCAGCTCAGCTCAAGCTGGCACCGCGAAGAGTGCTTCAGCACAGAAAGTAGTTCTTGAGATTATTGTTATTGATGGTGATGTCGTCGTTCCTCCTGCTCCTAAGGTCAGATCCTCCCCCAAGAATAAAAAGAATAAAGAGGGGAATGAGAAGAAGGAGAAGAAGGAAAAAGCTGAGAAGAGGGGTCGCAAAGTCGCGGCTGTACAGGAGGTCGCTAAGGGATGCTTAGCAAGGTCAACTCAAAGACAACACTTGGTAATGATGCCTACAGCGGGCAACATTCAAAGAGATATGTACGTCGTAGCTGATGCTGTCATGATGGTCTGCCAAACTACTGCGCAGATAAAGCTCGAGCTGGACTGGCGTGATAAGCTGTTAGTTGAAGAGGACTCATCCCGAGCTCGTTCTGTCCGAAATGAAGCAGATCTACGTGGAGTGTGGACCACTCTTCCACAAAAGACAAAGGACCCTAAAGAAGTCATCGCCAAGTATATGAAGGAGCTTTTCTCTTATGAGAGAGTTGTAGATATCGTTGGGACGAGCTCTGAAGAGAATCAAGATCCTCCTCAAGCACAGCTTATTCACGGCTCATCTCCTTTTTACTTTCAGCTTTTTGGAATTCACCCTCTCAGACAACTAACTGAGTTTAACGAGGTCGCTACTCACTTAGTTTGGAAAGAGTTCTTAGCTCAGTATGATGTAGATAAAGCGTAG

Coding sequence (CDS)

ATGTCCGCGACTGCGAGGCGCGACAGGCGGTTGCACGCCGTACATGCGATGGCAAGGGAGACGCCCCTCCACTCCCACGATACGGGGGCATGCCGAGCTCCGCCACCTGTAAGTGGCAATCGGCAGATCCCAGGCGTGCAGGTGGAGGCACCACCTACCAATTGTTGTGAGTGTACACTCCTGACAAGAACCGTACAACTCATTTGTTTCATCGTCCTTCCTGGTCGGCCATCCGAACTTATAAAATGGAACGACACTCACGTTTACCAGACAAGTGAAGAACCGGTAGGCAGGGGAGACAAAGTCGTTGGTGCTGTTACTACCCATGGCTACGGCAGTCGGGCCCCCATGTCAGTGGTCAGGCCTGAGCTTGGATTCCTCGGGACGGCGTGTATAACTTTCATGATCTTAGTTCGACATGGATCAGTGGCAGAGATGCTTCCTCAGATCTTCAACAGAGTAAAAATGTCCGAGGAGAAGGAGGCCAGCTCAGCTCAAGCTGGCACCGCGAAGAGTGCTTCAGCACAGAAAGTAGTTCTTGAGATTATTGTTATTGATGGTGATGTCGTCGTTCCTCCTGCTCCTAAGGTCAGATCCTCCCCCAAGAATAAAAAGAATAAAGAGGGGAATGAGAAGAAGGAGAAGAAGGAAAAAGCTGAGAAGAGGGGTCGCAAAGTCGCGGCTGTACAGGAGGTCGCTAAGGGATGCTTAGCAAGGTCAACTCAAAGACAACACTTGGTAATGATGCCTACAGCGGGCAACATTCAAAGAGATATGTACGTCGTAGCTGATGCTGTCATGATGGTCTGCCAAACTACTGCGCAGATAAAGCTCGAGCTGGACTGGCGTGATAAGCTGTTAGTTGAAGAGGACTCATCCCGAGCTCGTTCTGTCCGAAATGAAGCAGATCTACGTGGAGTGTGGACCACTCTTCCACAAAAGACAAAGGACCCTAAAGAAGTCATCGCCAAGTATATGAAGGAGCTTTTCTCTTATGAGAGAGTTGTAGATATCGTTGGGACGAGCTCTGAAGAGAATCAAGATCCTCCTCAAGCACAGCTTATTCACGGCTCATCTCCTTTTTACTTTCAGCTTTTTGGAATTCACCCTCTCAGACAACTAACTGAGTTTAACGAGGTCGCTACTCACTTAGTTTGGAAAGAGTTCTTAGCTCAGTATGATGTAGATAAAGCGTAG

Protein sequence

MSATARRDRRLHAVHAMARETPLHSHDTGACRAPPPVSGNRQIPGVQVEAPPTNCCECTLLTRTVQLICFIVLPGRPSELIKWNDTHVYQTSEEPVGRGDKVVGAVTTHGYGSRAPMSVVRPELGFLGTACITFMILVRHGSVAEMLPQIFNRVKMSEEKEASSAQAGTAKSASAQKVVLEIIVIDGDVVVPPAPKVRSSPKNKKNKEGNEKKEKKEKAEKRGRKVAAVQEVAKGCLARSTQRQHLVMMPTAGNIQRDMYVVADAVMMVCQTTAQIKLELDWRDKLLVEEDSSRARSVRNEADLRGVWTTLPQKTKDPKEVIAKYMKELFSYERVVDIVGTSSEENQDPPQAQLIHGSSPFYFQLFGIHPLRQLTEFNEVATHLVWKEFLAQYDVDKA

Homology

[Close]

BLAST of Moc01g34880 vs. NCBI nr
Match: XP_022155848.1 (uncharacterized protein LOC111022872 [Momordica charantia] >XP_022155849.1 uncharacterized protein LOC111022872 [Momordica charantia])

HSP 1 Score: 61.2 bits (147), Expect = 2.3e-05
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 308 WTTLPQKTKDPKEVIAKYMKELFSYERVVDIVGTSSEENQDPPQA 353
           WTTLP KTK  +EVI KY+KELFS +  VD  GTSS+ENQD  QA
Sbjct: 144 WTTLPDKTKASEEVITKYVKELFSKDEDVDNAGTSSQENQDTLQA 188

[Close]

BLAST of Moc01g34880 vs. ExPASy TrEMBL
Match: A0A6J1DRG7 (uncharacterized protein LOC111022872 OS=Momordica charantia OX=3673 GN=LOC111022872 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-05
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 308 WTTLPQKTKDPKEVIAKYMKELFSYERVVDIVGTSSEENQDPPQA 353
           WTTLP KTK  +EVI KY+KELFS +  VD  GTSS+ENQD  QA
Sbjct: 144 WTTLPDKTKASEEVITKYVKELFSKDEDVDNAGTSSQENQDTLQA 188

The following BLAST results are available for this feature:

BLAST of Moc01g34880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155848.1	2.3e-05	66.67	uncharacterized protein LOC111022872 [Momordica charantia] >XP_022155849.1 uncha...	[more]

BLAST of Moc01g34880 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc01g34880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DRG7	1.1e-05	66.67	uncharacterized protein LOC111022872 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Moc01g34880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 202..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g34880.1	Moc01g34880.1	mRNA