Moc01g34540 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc01g34540
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionSET domain-containing protein
Locationchr1: 24452997 .. 24455287 (-)
RNA-Seq ExpressionMoc01g34540
SyntenyMoc01g34540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGTCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCTATCAGGAGAGAGATGGTTGAACCCTTCTACGACAATAAAGACGCTGCCAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCACCTAAGCTTCCTGTGCGTCCCTCTCCTTTCACCTCCGATGCCTCTACCACCGACGTTGCGCCAGCATCTACTTCCACCACTTCCCACGCTCCTATGGCTATGGGTACCCCCTTAATTCCGTCTATTACCCGCACAACTTTTTTTTTTCCTCTCCATTCTTCATTATTTAGGTTATGACTTTCATTGTAGTGTTTCTTATGTTATGGAAATTTTACTCAACCCATGCCAAATCTTTTCTTTTTCGTTTTTTTTGGATGAAACTTGTATATATCAACAAAAAGGCGAAAACAACCTAAGGGTTGGGGGTAACCCCCTCCCGGAAAAGGCTACCGAAATGCTTTTACTCCGTGCTTATTACTTTGTGTAGTCATAAGAAAGAGAGAGCGAGAGAGCTGCCCTCTGAATAAATCTCATGCTATTCACAATCTTCACGTTGTTACCTGATATGTTGAGGCTTCATGTCGATCAATTCTTCATGAATTAATCCCTACATTCTTAGCGCCCAGATGTCCAATTTTTGTTTTGCACAACTTTATCCAAGAGAGAAATTAGGTGATGGAGGAATGTTGCCCAACTTCAGTATGTATTAATTATGTTCCCTTTTCCATGAAGATGAAGATCAAACTATTTTGGTGAAATTTCGTTTATGGAGTCTAAACTTGCTTTTTTTTTTTTTTTGAACTCAACTCTAAGGTAGATGAATGCATTTTTTTCAATCTTCTTATATAAGCCGTATTTGTTGTTCAATTTTTATTTAAGCGTTAGCTTACTTCTTTCTCGTAATTATTCTTTACCCGTTAATTTTTTGGCCATGAGTTTAACTGTTTAAGTGACAGATGAGTAGAAATCAGGATCATATTTTTAAACTTTTCCAGTTAGAAATATCCAAGTTTGTCAGTGACTTATTTTTATTGGAGAGTTCTATATGTTTTTCCTATCCCTACTATTAAATGTAACTAGAGATCGCCTATGACCTATGAATAATACTCCCTCGTTTTAAAGCCTTTTACTTTCTGATTATGATCCTACTGTTTGTTAACTTATGAAAAAGAAACTTATGCTAAACCTATTGCTAGGTATTTTATCGTGCTTTATTGTGTGGAGATGTGAGATTGGGCTTTGATTTTAAAATTTTAGAAGAGGTACTTTGCTGTCAATCATGTTACCAAGCTCTACATTAACTCTCCAATGGGTTTTTTGAGTTGGAATCTGCCACAGGTCTTTTCAACTCCAATACTGACTACTGCAGAAAACAGTAAAATAATAAACCTTGAATGAGTTGAAACTATTAGTTTGAACTACCAAATAGTCATTTTCTGGAAAAAGGAACGTAATGACTTTTGTTTGCATGAATTTCAACCAATAATGGAATTATAGTATCAACCAAAGTGCAATACAACTGTTCTCTTTTCTGCTGGTGCTGCAGATGGATTTATGGAACCAGGCCCTCATTTCTTTGTAATTGTCTGTTACAGATGTGGAGTTGGATGATCCCAGTCAAAGCATGAAGATGAAGCCTGTTGGTGGAATTGGAAAGAAATCCGGAAGAAAATTCAAGGTTGGTAAGGCCAAGCGCCGGGGTAAGTGCAGGATCAAGAGGAACCGCCACATTTAATCCCTGGTAGATATATCCCGTGGCCAGTAGAAATAGATGGAAAGTCCGATGGAATGGTTATGATATTGTATTTTATTTTAGTGTCATTTGTCACTATTGAAATTTTGGAGTAGGCCAAGTCCAGAGATATAATCTTTTTTGACTCGAAGGTAATTGGCCTGTTAACTCACGTCTCTACGTGACTAGCCTTTGCCCTCGAAGCTGCTGCGGCTATTTTTAATTTGAGTTAAATTTTGAATTATATGCTTACCCGATTATAATCTTTGTGTTTACAATCTGGCTTTGTGTATACTTGATTGATTGGTGCAATTAAATATGGCAAATGGTTGGAGTTCGTTCCCAGTATGGATGATATGCTGCTATAGAAAGTAACAAAGTTGGCCAAAAGTTAACATAACAATATGAGTGAAATGAAATGTATAAAGACGCCCTTCCTTTGGAGACATTTGGTCATTGTTTTCCAGAGTTTCAACCCATTACATCAGATATCGATGCTATTGGTTTGGCTGGAAGGTTTGACGAGTTCAACAAGAAAATAACAAAAGCATAA

mRNA sequence

ATGGCGAAGTCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCTATCAGGAGAGAGATGGTTGAACCCTTCTACGACAATAAAGACGCTGCCAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCACCTAAGCTTCCTGTGCGTCCCTCTCCTTTCACCTCCGATGCCTCTACCACCGACGTTGCGCCAGCATCTACTTCCACCACTTCCCACGCTCCTATGGCTATGGATGTGGAGTTGGATGATCCCAGTCAAAGCATGAAGATGAAGCCTGTTGGTGGAATTGGAAAGAAATCCGGAAGAAAATTCAAGGTTGGTAAGGCCAAGCGCCGGGAGTTTCAACCCATTACATCAGATATCGATGCTATTGGTTTGGCTGGAAGGTTTGACGAGTTCAACAAGAAAATAACAAAAGCATAA

Coding sequence (CDS)

ATGGCGAAGTCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCTATCAGGAGAGAGATGGTTGAACCCTTCTACGACAATAAAGACGCTGCCAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCACCTAAGCTTCCTGTGCGTCCCTCTCCTTTCACCTCCGATGCCTCTACCACCGACGTTGCGCCAGCATCTACTTCCACCACTTCCCACGCTCCTATGGCTATGGATGTGGAGTTGGATGATCCCAGTCAAAGCATGAAGATGAAGCCTGTTGGTGGAATTGGAAAGAAATCCGGAAGAAAATTCAAGGTTGGTAAGGCCAAGCGCCGGGAGTTTCAACCCATTACATCAGATATCGATGCTATTGGTTTGGCTGGAAGGTTTGACGAGTTCAACAAGAAAATAACAAAAGCATAA

Protein sequence

MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTDVAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRREFQPITSDIDAIGLAGRFDEFNKKITKA
Homology
BLAST of Moc01g34540 vs. NCBI nr
Match: XP_022146541.1 (uncharacterized protein LOC111015735 [Momordica charantia])

HSP 1 Score: 204.1 bits (518), Expect = 7.6e-49
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60
           MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD
Sbjct: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60

Query: 61  VAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR 112
           VAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR
Sbjct: 61  VAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR 111

BLAST of Moc01g34540 vs. NCBI nr
Match: XP_038877484.1 (uncharacterized protein LOC120069761 [Benincasa hispida])

HSP 1 Score: 155.6 bits (392), Expect = 3.1e-34
Identity = 91/111 (81.98%), Postives = 97/111 (87.39%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60
           MAKSMRSKREKRLRAIRREMV+PFYD KDAAKLAAQ+AALAAPKLPVR SPFTS+ ST D
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRSSPFTSNVSTMD 60

Query: 61  VAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR 112
           VA ASTST   A  AMDVE+DD S+S  +KPVGGIGKKS RKFKVGKAKRR
Sbjct: 61  VAQASTST--DADTAMDVEMDDCSRSNTLKPVGGIGKKSKRKFKVGKAKRR 109

BLAST of Moc01g34540 vs. NCBI nr
Match: KAG6594375.1 (hypothetical protein SDJN03_10928, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.4 bits (381), Expect = 5.9e-33
Identity = 92/113 (81.42%), Postives = 99/113 (87.61%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60
           MAKSMRSKREKRLRAIRREMVEP YD KDAAKLAAQQAALAAPKLPVRPSPFT + ST D
Sbjct: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFT-NISTMD 60

Query: 61  VAPASTSTTSHAPMAMDVELDDPSQS-MKMKPVGGIGKKSGRKFKVGKAKRRE 113
           VAPASTST + A  AM+VE+DD S+S M +K VGGIGKKS +KFKVGKAKRRE
Sbjct: 61  VAPASTSTAADA--AMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRRE 110

BLAST of Moc01g34540 vs. NCBI nr
Match: XP_008439430.1 (PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo] >KAA0052419.1 uncharacterized protein E6C27_scaffold120G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-32
Identity = 87/111 (78.38%), Postives = 97/111 (87.39%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60
           MAKSMRSKREKRLRAIRREMV+PFYD K+AAKLAAQ+AALAAPKLPVR SPFTS+ ST D
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPFTSNVSTMD 60

Query: 61  VAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR 112
           VA ASTS+   A  AMDV++DD S+S  +KPVGG+GKKS RKFKVGKAKRR
Sbjct: 61  VALASTSSAPDA--AMDVDMDDCSRSNTLKPVGGVGKKSKRKFKVGKAKRR 109

BLAST of Moc01g34540 vs. NCBI nr
Match: XP_022926965.1 (uncharacterized protein LOC111433923 [Cucurbita moschata] >XP_023003712.1 uncharacterized protein LOC111497220 [Cucurbita maxima] >XP_023517951.1 uncharacterized protein LOC111781531 [Cucurbita pepo subsp. pepo] >KAG7026380.1 hypothetical protein SDJN02_10379 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149.4 bits (376), Expect = 2.2e-32
Identity = 91/112 (81.25%), Postives = 98/112 (87.50%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60
           MAKSMRSKREKRLRAIRREMVEP YD KDAAKLAAQQAALAAPKLPVRPSPFT + ST D
Sbjct: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFT-NISTMD 60

Query: 61  VAPASTSTTSHAPMAMDVELDDPSQS-MKMKPVGGIGKKSGRKFKVGKAKRR 112
           VAPASTST + A  AM+VE+DD S+S M +K VGGIGKKS +KFKVGKAKRR
Sbjct: 61  VAPASTSTAADA--AMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRR 109

BLAST of Moc01g34540 vs. ExPASy TrEMBL
Match: A0A6J1CZN9 (uncharacterized protein LOC111015735 OS=Momordica charantia OX=3673 GN=LOC111015735 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.7e-49
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60
           MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD
Sbjct: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60

Query: 61  VAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR 112
           VAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR
Sbjct: 61  VAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR 111

BLAST of Moc01g34540 vs. ExPASy TrEMBL
Match: A0A5A7UG11 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00140 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 6.3e-33
Identity = 87/111 (78.38%), Postives = 97/111 (87.39%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60
           MAKSMRSKREKRLRAIRREMV+PFYD K+AAKLAAQ+AALAAPKLPVR SPFTS+ ST D
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPFTSNVSTMD 60

Query: 61  VAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR 112
           VA ASTS+   A  AMDV++DD S+S  +KPVGG+GKKS RKFKVGKAKRR
Sbjct: 61  VALASTSSAPDA--AMDVDMDDCSRSNTLKPVGGVGKKSKRKFKVGKAKRR 109

BLAST of Moc01g34540 vs. ExPASy TrEMBL
Match: A0A1S3AZE5 (uncharacterized protein LOC103484241 OS=Cucumis melo OX=3656 GN=LOC103484241 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 6.3e-33
Identity = 87/111 (78.38%), Postives = 97/111 (87.39%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60
           MAKSMRSKREKRLRAIRREMV+PFYD K+AAKLAAQ+AALAAPKLPVR SPFTS+ ST D
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPFTSNVSTMD 60

Query: 61  VAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR 112
           VA ASTS+   A  AMDV++DD S+S  +KPVGG+GKKS RKFKVGKAKRR
Sbjct: 61  VALASTSSAPDA--AMDVDMDDCSRSNTLKPVGGVGKKSKRKFKVGKAKRR 109

BLAST of Moc01g34540 vs. ExPASy TrEMBL
Match: A0A6J1KND1 (uncharacterized protein LOC111497220 OS=Cucurbita maxima OX=3661 GN=LOC111497220 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32
Identity = 91/112 (81.25%), Postives = 98/112 (87.50%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60
           MAKSMRSKREKRLRAIRREMVEP YD KDAAKLAAQQAALAAPKLPVRPSPFT + ST D
Sbjct: 1   MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFT-NISTMD 60

Query: 61  VAPASTSTTSHAPMAMDVELDDPSQS-MKMKPVGGIGKKSGRKFKVGKAKRR 112
           VAPASTST + A  AM+VE+DD S+S M +K VGGIGKKS +KFKVGKAKRR
Sbjct: 61  VAPASTSTAADA--AMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRR 109

BLAST of Moc01g34540 vs. ExPASy TrEMBL
Match: A0A0A0KJ42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538670 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32
Identity = 86/111 (77.48%), Postives = 97/111 (87.39%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVEPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDASTTD 60
           MAKSMRSKREKRLRAIRREMV+PFYD K+AAKLAAQ+AALAAPKLPVR SP TS+ ST D
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPLTSNVSTMD 60

Query: 61  VAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR 112
           VAP STS+ + A  AMDV++DD S+S  +KPVGG+GKKS RKFKVGKAKRR
Sbjct: 61  VAPPSTSSAADA--AMDVDVDDCSRSDVLKPVGGVGKKSKRKFKVGKAKRR 109

BLAST of Moc01g34540 vs. TAIR 10
Match: AT1G30880.1 (unknown protein; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 3.2e-13
Identity = 54/113 (47.79%), Postives = 69/113 (61.06%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMV--EPFYDNKDAAKLAAQQAALAAPKLPVRPSPFTSDAST 60
           MAKSMR KR KRLRAIRRE+V  E F   ++ AK AA +AALAAPKLPVR +P +     
Sbjct: 1   MAKSMRCKRVKRLRAIRREIVEKESFTLTREDAKSAAIEAALAAPKLPVRQAPVSPFMEV 60

Query: 61  TDVAPASTSTTSHAPMAMDVELDDPSQSMKMKPVGGIGKKSGRKFKVGKAKRR 112
              +  S S ++      D E+DD  ++  +KP   IGKK  +KFK+G   RR
Sbjct: 61  ATPSSESASASTTIANDSDEEMDDEKKNKSLKP---IGKKLKKKFKLGMKNRR 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022146541.17.6e-49100.00uncharacterized protein LOC111015735 [Momordica charantia][more]
XP_038877484.13.1e-3481.98uncharacterized protein LOC120069761 [Benincasa hispida][more]
KAG6594375.15.9e-3381.42hypothetical protein SDJN03_10928, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008439430.11.3e-3278.38PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo] >KAA0052419.1 unc... [more]
XP_022926965.12.2e-3281.25uncharacterized protein LOC111433923 [Cucurbita moschata] >XP_023003712.1 unchar... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CZN93.7e-49100.00uncharacterized protein LOC111015735 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A5A7UG116.3e-3378.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3AZE56.3e-3378.38uncharacterized protein LOC103484241 OS=Cucumis melo OX=3656 GN=LOC103484241 PE=... [more]
A0A6J1KND11.1e-3281.25uncharacterized protein LOC111497220 OS=Cucurbita maxima OX=3661 GN=LOC111497220... [more]
A0A0A0KJ421.1e-3277.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538670 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G30880.13.2e-1347.79unknown protein; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..108
NoneNo IPR availablePANTHERPTHR36320OS04G0611300 PROTEINcoord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc01g34540.1Moc01g34540.1mRNA