Moc01g34350 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g34350
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	MADS-box protein FBP24
Location	chr1: 24321481 .. 24322572 (-)
RNA-Seq Expression	Moc01g34350
Synteny	Moc01g34350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAGGAAAAATCGCAATCAAGAGGATCGAGAACCGGACGACAAGGCAAGTTACTTTCTCGAAGCGGCGAGCTGGGCTTTTCAAGAAGACTCATGAACTCTCCGTTCTGTGCGACGCTCAGATCGGACTCATCGTCTTCTCCAGCAACGGAAAGTGCTTCGAATACTGCTCCCAACCAACTTGGTAAGTGGTAACTACATACTCACACTCACACTACTACCTACTAAATACCACTACTACCCTACTTGTGTTGATTAATTATTAATTCATTTCTCACAGCATGGATCAAATCATAAAAAGGTATCAGATTTCACTGGCCGGGAGCCGAGCTCCGGACCGGCTGCACGACGGCAACGACCCGGACCCGGTATGGGTATATATCTTAATTTTATTTAAAGGAATCAAAATGGAATAATATATGTTAATAAATATTGTAATGTACAATAATTAGGAAGAACTGGCGAGCCAAATTCGGAAAATGAGAAAAGAGACGGAGGAGCTTCAGGTGAGATTGCAGCGGTACACGGGGGAGGATCTCAGCGCCATTCAGCTCCGCGATTTGGATGAAATGGACCACCGTCTCCAAAACTCTCTCAATCGAGTTCGTGCCAGGAAGGTAACGTAGTTAACTCCAATAATTCTCTAATAACGTTACCCTAATCCCTAATTCCTAATTAAATTCCTGATTAATCCATTTAATTTGCAGTCTGAGCTGTTTCAGCAGCAAATGGACAATCTCAAGAGAAAGGTTATTTTCTGTCTCTCTCTCTCTCTGTAGATCGAACTCCTTCAATTCTTCCTTGTGTGATCATATACAGCGCTTGGGCTTTGTGTGTACGTAGGAGAAAATTCTGGAGGATGAAAATGAGCAAATATATCATATGGTAAGTAATTTAATTAATAATTAATGGAATTAAAAAGATGAGCAGTGTTTTAATTAACATTAACTGGGCGGATTGGGATATATTGGGGTACAACCGTAGATAAAAGAGCAGCAGATGGCGGCGGCGATGATGCAGAAGAGCGAAGAGGAACAGATGATGAGCAGCCACGTAGACATGAACCAGCAGCACCAGCAGATGCATGA

mRNA sequence

ATGGGAAGAGGAAAAATCGCAATCAAGAGGATCGAGAACCGGACGACAAGGCAAGTTACTTTCTCGAAGCGGCGAGCTGGGCTTTTCAAGAAGACTCATGAACTCTCCGTTCTGTGCGACGCTCAGATCGGACTCATCGTCTTCTCCAGCAACGGAAAGTGCTTCGAATACTGCTCCCAACCAACTTGCATGGATCAAATCATAAAAAGGTATCAGATTTCACTGGCCGGGAGCCGAGCTCCGGACCGGCTGCACGACGGCAACGACCCGGACCCGGAAGAACTGGCGAGCCAAATTCGGAAAATGAGAAAAGAGACGGAGGAGCTTCAGGTGAGATTGCAGCGGTACACGGGGGAGGATCTCAGCGCCATTCAGCTCCGCGATTTGGATGAAATGGACCACCGTCTCCAAAACTCTCTCAATCGAGTTCGTGCCAGGAAGTCTGAGCTGTTTCAGCAGCAAATGGACAATCTCAAGAGAAAGCGCTTGGGCTTTGTGTATAAAAGAGCAGCAGATGGCGGCGGCGATGATGCAGAAGAGCGAAGAGGAACAGATGATGAGCAGCCACGTAGACATGAACCAGCAGCACCAGCAGATGCATGA

Coding sequence (CDS)

ATGGGAAGAGGAAAAATCGCAATCAAGAGGATCGAGAACCGGACGACAAGGCAAGTTACTTTCTCGAAGCGGCGAGCTGGGCTTTTCAAGAAGACTCATGAACTCTCCGTTCTGTGCGACGCTCAGATCGGACTCATCGTCTTCTCCAGCAACGGAAAGTGCTTCGAATACTGCTCCCAACCAACTTGCATGGATCAAATCATAAAAAGGTATCAGATTTCACTGGCCGGGAGCCGAGCTCCGGACCGGCTGCACGACGGCAACGACCCGGACCCGGAAGAACTGGCGAGCCAAATTCGGAAAATGAGAAAAGAGACGGAGGAGCTTCAGGTGAGATTGCAGCGGTACACGGGGGAGGATCTCAGCGCCATTCAGCTCCGCGATTTGGATGAAATGGACCACCGTCTCCAAAACTCTCTCAATCGAGTTCGTGCCAGGAAGTCTGAGCTGTTTCAGCAGCAAATGGACAATCTCAAGAGAAAGCGCTTGGGCTTTGTGTATAAAAGAGCAGCAGATGGCGGCGGCGATGATGCAGAAGAGCGAAGAGGAACAGATGATGAGCAGCCACGTAGACATGAACCAGCAGCACCAGCAGATGCATGA

Protein sequence

MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQPTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGEDLSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRKRLGFVYKRAADGGGDDAEERRGTDDEQPRRHEPAAPADA

Homology

[Close]

BLAST of Moc01g34350 vs. NCBI nr
Match: XP_022146643.1 (MADS-box protein FBP24 [Momordica charantia] >XP_022146644.1 MADS-box protein FBP24 [Momordica charantia] >XP_022146645.1 MADS-box protein FBP24 [Momordica charantia] >XP_022146646.1 MADS-box protein FBP24 [Momordica charantia])

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-82
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ
Sbjct: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
           PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED
Sbjct: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
           LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK
Sbjct: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 161

[Close]

BLAST of Moc01g34350 vs. NCBI nr
Match: XP_038883280.1 (MADS-box protein FBP24 isoform X1 [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 6.4e-57
Identity = 120/161 (74.53%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKIAI+RIENRTTRQVTFSKRR GLFKKTHELSVLCDAQIGLIVFSSNGK FEYC+Q
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIGLIVFSSNGKLFEYCTQ 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
            TCMDQII+RYQI++ GSR P++    N  DPEEL  ++R MRK+T++LQ+ LQRYT +D
Sbjct: 61  TTCMDQIIRRYQIAI-GSRIPEQ----NMNDPEELERRVRIMRKDTDDLQLSLQRYTADD 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
            S   LRDLD++++RLQNSLNRVRARKSEL QQQ+DNL+RK
Sbjct: 121 FSTFHLRDLDDIENRLQNSLNRVRARKSELLQQQVDNLRRK 156

[Close]

BLAST of Moc01g34350 vs. NCBI nr
Match: XP_038883284.1 (MADS-box protein FBP24 isoform X5 [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 6.4e-57
Identity = 120/161 (74.53%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKIAI+RIENRTTRQVTFSKRR GLFKKTHELSVLCDAQIGLIVFSSNGK FEYC+Q
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIGLIVFSSNGKLFEYCTQ 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
            TCMDQII+RYQI++ GSR P++    N  DPEEL  ++R MRK+T++LQ+ LQRYT +D
Sbjct: 61  TTCMDQIIRRYQIAI-GSRIPEQ----NMNDPEELERRVRIMRKDTDDLQLSLQRYTADD 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
            S   LRDLD++++RLQNSLNRVRARKSEL QQQ+DNL+RK
Sbjct: 121 FSTFHLRDLDDIENRLQNSLNRVRARKSELLQQQVDNLRRK 156

[Close]

BLAST of Moc01g34350 vs. NCBI nr
Match: XP_004134531.2 (MADS-box protein FBP24 isoform X1 [Cucumis sativus] >XP_031743699.1 MADS-box protein FBP24 isoform X2 [Cucumis sativus] >KAE8647781.1 hypothetical protein Csa_002733 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 6.4e-57
Identity = 120/161 (74.53%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKIAI+RIENRTTRQVTFSKRR GLFKKTHELSVLCDAQI LIVFSSNGK FEYC+Q
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
            TCMDQII+RYQI++ GSR P+     N  DPEEL  Q+R M+KET++LQ+ LQRYT +D
Sbjct: 61  TTCMDQIIRRYQIAI-GSRIPEH----NMNDPEELERQVRSMKKETDDLQLSLQRYTADD 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
            S   LRDLD++++RLQNSLNRVRARKSEL QQQ+DNL+RK
Sbjct: 121 FSTFHLRDLDDIENRLQNSLNRVRARKSELLQQQVDNLRRK 156

[Close]

BLAST of Moc01g34350 vs. NCBI nr
Match: XP_038883282.1 (MADS-box protein FBP24 isoform X3 [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 6.4e-57
Identity = 120/161 (74.53%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKIAI+RIENRTTRQVTFSKRR GLFKKTHELSVLCDAQIGLIVFSSNGK FEYC+Q
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIGLIVFSSNGKLFEYCTQ 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
            TCMDQII+RYQI++ GSR P++    N  DPEEL  ++R MRK+T++LQ+ LQRYT +D
Sbjct: 61  TTCMDQIIRRYQIAI-GSRIPEQ----NMNDPEELERRVRIMRKDTDDLQLSLQRYTADD 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
            S   LRDLD++++RLQNSLNRVRARKSEL QQQ+DNL+RK
Sbjct: 121 FSTFHLRDLDDIENRLQNSLNRVRARKSELLQQQVDNLRRK 156

[Close]

BLAST of Moc01g34350 vs. ExPASy Swiss-Prot
Match: Q9ATE5 (MADS-box protein FBP24 OS=Petunia hybrida OX=4102 GN=FBP24 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-44
Identity = 95/160 (59.38%), Postives = 122/160 (76.25%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKI +KRIEN+T+RQVTFSKRRAGL KKTHELSVLCDAQIGLI+FSS GK FEYCSQ
Sbjct: 4   MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQ 63

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
           P  M QII RY +   G+  P       + +  +L  ++ KMR++T  LQ+ LQRY G+D
Sbjct: 64  PHSMSQIISRY-LQTTGASLP------VEDNRVQLYDEVAKMRRDTLNLQLSLQRYKGDD 123

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKR 161
           LS  Q  +L+E++ +L+++LN++RARK EL QQQM+NLK+
Sbjct: 124 LSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKK 156

[Close]

BLAST of Moc01g34350 vs. ExPASy Swiss-Prot
Match: Q8RVL4 (MADS-box protein defh21 OS=Antirrhinum majus OX=4151 GN=DEFH21 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.0e-41
Identity = 90/160 (56.25%), Postives = 114/160 (71.25%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKI +KRIEN T+RQVTFSKRR+GL KKTHELSVLCDAQIGLIVFS+ GK  EYC+ 
Sbjct: 1   MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTP 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
           P  M QII RY +   G         G   D +++  ++ +M++ET  LQ+ LQRY G+D
Sbjct: 61  PFSMKQIIDRY-VKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDD 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKR 161
           LS ++  +L E++  L  SLN+VRARK EL  +QM+NLKR
Sbjct: 121 LSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKR 159

[Close]

BLAST of Moc01g34350 vs. ExPASy Swiss-Prot
Match: Q8RYD9 (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana OX=3702 GN=TT16 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.0e-37
Identity = 87/162 (53.70%), Postives = 117/162 (72.22%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKI IK+IEN+T RQVTFSKRR GL KKT ELS+LCDA IGLIVFS+ GK  E+CS+
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
              M Q+I RY +   G R PD  HD    D E+L  ++  +R+ET  L++RL+ + G D
Sbjct: 61  QNRMPQLIDRY-LHTNGLRLPDH-HD----DQEQLHHEMELLRRETCNLELRLRPFHGHD 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRKR 163
           L++I   +LD ++ +L++S+ +VR RK+EL QQQ++NL RKR
Sbjct: 121 LASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKR 156

[Close]

BLAST of Moc01g34350 vs. ExPASy Swiss-Prot
Match: Q8VWM8 (MADS-box protein ZMM17 OS=Zea mays OX=4577 GN=M17 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-36
Identity = 78/161 (48.45%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKI IKRIEN T RQVTFSKRR GL KK +EL+VLCDA++G+++FSS GK FEYCS 
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
              + ++I++YQ     S   +  HD      +++  ++ +M+ E E+L+  ++RYTG+D
Sbjct: 61  ACSLRELIEQYQ-HATNSHFEEINHD------QQILLEMTRMKNEMEKLETGIRRYTGDD 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
           LS++ L D+ +++ +L+ S+++VRARK +L  QQ+DNL+RK
Sbjct: 121 LSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRK 154

[Close]

BLAST of Moc01g34350 vs. ExPASy Swiss-Prot
Match: Q9XGJ4 (MADS-box protein GGM13 OS=Gnetum gnemon OX=3382 GN=GGM13 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-36
Identity = 81/161 (50.31%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKI IKRIEN T RQVTFSKRR GL KK HELSVLCDA++GLI+FSS+GK FEY S 
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
            + M +II+RYQ  ++G+R         + D + L  ++ +M+ E E+LQ  ++R  GED
Sbjct: 61  SSSMKKIIERYQ-KVSGARI-------TEYDNQHLYCEMTRMKNENEKLQTNIRRMMGED 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
           L+++ + +L  +  +L+++ +RVR+RK++L  QQ++NL+RK
Sbjct: 121 LTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRK 153

[Close]

BLAST of Moc01g34350 vs. ExPASy TrEMBL
Match: A0A6J1CYP1 (MADS-box protein FBP24 OS=Momordica charantia OX=3673 GN=LOC111015797 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.6e-83
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ
Sbjct: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
           PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED
Sbjct: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
           LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK
Sbjct: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 161

[Close]

BLAST of Moc01g34350 vs. ExPASy TrEMBL
Match: A0A6J1KTV0 (MADS-box protein FBP24-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497166 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 9.0e-57
Identity = 122/161 (75.78%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKIAI+RIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQI LIVFSSNGK FEYCSQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCSQ 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
            TCMDQII+RYQI++ G+  PD+    N  DPEEL   +R MRK+T+ELQ+ LQRYT ED
Sbjct: 61  ATCMDQIIRRYQIAI-GNPIPDQ----NMNDPEELERLLRIMRKDTDELQLSLQRYTAED 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
           LS  QLRDLDE+++RLQ SLNRVRARKSE+ QQQ++NL+RK
Sbjct: 121 LSTFQLRDLDEIENRLQTSLNRVRARKSEVLQQQVENLRRK 156

[Close]

BLAST of Moc01g34350 vs. ExPASy TrEMBL
Match: A0A6J1ELC6 (MADS-box protein FBP24-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433644 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.4e-56
Identity = 121/161 (75.16%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKIAI+RIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQI LIVFSSNGK FEYCSQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCSQ 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
            TCMDQII+RYQI++ G+  PD+    N  DPEEL   +R MRK+T+ELQ+ LQRYT ED
Sbjct: 61  ATCMDQIIRRYQIAI-GNPIPDQ----NMNDPEELERLLRIMRKDTDELQLSLQRYTAED 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
           LS  QLRDLDE+++RLQ SLNRVRARKSE+  QQ++NL+RK
Sbjct: 121 LSTFQLRDLDEIENRLQTSLNRVRARKSEVLHQQVENLRRK 156

[Close]

BLAST of Moc01g34350 vs. ExPASy TrEMBL
Match: A0A6J1KX33 (MADS-box protein FBP24-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497166 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.2e-55
Identity = 122/162 (75.31%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKIAI+RIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQI LIVFSSNGK FEYCSQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCSQ 60

Query: 61  PTC-MDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGE 120
            TC MDQII+RYQI++ G+  PD+    N  DPEEL   +R MRK+T+ELQ+ LQRYT E
Sbjct: 61  ATCSMDQIIRRYQIAI-GNPIPDQ----NMNDPEELERLLRIMRKDTDELQLSLQRYTAE 120

Query: 121 DLSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
           DLS  QLRDLDE+++RLQ SLNRVRARKSE+ QQQ++NL+RK
Sbjct: 121 DLSTFQLRDLDEIENRLQTSLNRVRARKSEVLQQQVENLRRK 157

[Close]

BLAST of Moc01g34350 vs. ExPASy TrEMBL
Match: A0A6J1EEN0 (MADS-box protein FBP24-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111433644 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 8.5e-55
Identity = 121/162 (74.69%), Postives = 138/162 (85.19%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKIAI+RIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQI LIVFSSNGK FEYCSQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCSQ 60

Query: 61  PTC-MDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGE 120
            TC MDQII+RYQI++ G+  PD+    N  DPEEL   +R MRK+T+ELQ+ LQRYT E
Sbjct: 61  ATCSMDQIIRRYQIAI-GNPIPDQ----NMNDPEELERLLRIMRKDTDELQLSLQRYTAE 120

Query: 121 DLSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
           DLS  QLRDLDE+++RLQ SLNRVRARKSE+  QQ++NL+RK
Sbjct: 121 DLSTFQLRDLDEIENRLQTSLNRVRARKSEVLHQQVENLRRK 157

[Close]

BLAST of Moc01g34350 vs. TAIR 10
Match: AT5G23260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38
Identity = 87/162 (53.70%), Postives = 117/162 (72.22%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKI IK+IEN+T RQVTFSKRR GL KKT ELS+LCDA IGLIVFS+ GK  E+CS+
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
              M Q+I RY +   G R PD  HD    D E+L  ++  +R+ET  L++RL+ + G D
Sbjct: 61  QNRMPQLIDRY-LHTNGLRLPDH-HD----DQEQLHHEMELLRRETCNLELRLRPFHGHD 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRKR 163
           L++I   +LD ++ +L++S+ +VR RK+EL QQQ++NL RKR
Sbjct: 121 LASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKR 156

[Close]

BLAST of Moc01g34350 vs. TAIR 10
Match: AT5G23260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 145.2 bits (365), Expect = 5.6e-35
Identity = 84/162 (51.85%), Postives = 113/162 (69.75%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKI IK+IEN+T RQVTFSKRR GL KKT ELS+LCDA IGLIVFS+ GK  E+CS+
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
              M Q+I RY +   G R PD  HD    D E+L  ++  +R+ET  L++RL+ + G D
Sbjct: 61  QNRMPQLIDRY-LHTNGLRLPDH-HD----DQEQLHHEMELLRRETCNLELRLRPFHGHD 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRKR 163
           L++I   +LD ++ +L++S+ +VR RK     QQ++NL RKR
Sbjct: 121 LASIPPNELDGLERQLEHSVLKVRERK-----QQLENLSRKR 151

[Close]

BLAST of Moc01g34350 vs. TAIR 10
Match: AT5G23260.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-34
Identity = 79/160 (49.38%), Postives = 111/160 (69.38%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRGKI IK+IEN+T RQVTFSKRR GL KKT ELS+LCDA IGLIVFS+ GK  E+CS+
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
              M Q+I RY +   G R PD  HD    D E+L  ++  +R+ET  L++RL+ + G D
Sbjct: 61  QNRMPQLIDRY-LHTNGLRLPDH-HD----DQEQLHHEMELLRRETCNLELRLRPFHGHD 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKR 161
           L++I   +LD ++ +L++S+ +VR RK  + ++  +N+ R
Sbjct: 121 LASIPPNELDGLERQLEHSVLKVRERKRRMLEEDNNNMYR 154

[Close]

BLAST of Moc01g34350 vs. TAIR 10
Match: AT5G60910.1 (AGAMOUS-like 8 )

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-29
Identity = 66/161 (40.99%), Postives = 105/161 (65.22%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRG++ +KRIEN+  RQVTFSKRR+GL KK HE+SVLCDA++ LIVFSS GK FEY S 
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEY-ST 60

Query: 61  PTCMDQIIKRYQISLAGSRAPDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYTGED 120
            +CM++I++RY   L   +   +L   +    E    +  K++   E L+   + + GED
Sbjct: 61  DSCMERILERYDRYLYSDK---QLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGED 120

Query: 121 LSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
           L ++ L++L  ++H+L  ++  +R+RK++   + +  L++K
Sbjct: 121 LDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKK 157

[Close]

BLAST of Moc01g34350 vs. TAIR 10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 125.6 bits (314), Expect = 4.6e-29
Identity = 66/164 (40.24%), Postives = 107/164 (65.24%), Query Frame = 0


Query: 1   MGRGKIAIKRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCSQ 60
           MGRG++ +KRIEN+  RQVTFSKRR GL KK  E+SVLCDA++ LIVFS  GK FEY S+
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  PTCMDQIIKRYQISLAGSR---APDRLHDGNDPDPEELASQIRKMRKETEELQVRLQRYT 120
            +CM+++++RY+      R   APD   +         + +  +++ + E L+   + Y 
Sbjct: 61  -SCMEKVLERYERYSYAERQLIAPDSHVNAQ----TNWSMEYSRLKAKIELLERNQRHYL 120

Query: 121 GEDLSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRK 162
           GE+L  + L+DL  ++ +L+ +L  +R+RK++L  + +++L+RK
Sbjct: 121 GEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRK 159

The following BLAST results are available for this feature:

BLAST of Moc01g34350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146643.1	2.0e-82	100.00	MADS-box protein FBP24 [Momordica charantia] >XP_022146644.1 MADS-box protein FB...	[more]
XP_038883280.1	6.4e-57	74.53	MADS-box protein FBP24 isoform X1 [Benincasa hispida]	[more]
XP_038883284.1	6.4e-57	74.53	MADS-box protein FBP24 isoform X5 [Benincasa hispida]	[more]
XP_004134531.2	6.4e-57	74.53	MADS-box protein FBP24 isoform X1 [Cucumis sativus] >XP_031743699.1 MADS-box pro...	[more]
XP_038883282.1	6.4e-57	74.53	MADS-box protein FBP24 isoform X3 [Benincasa hispida]	[more]

BLAST of Moc01g34350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ATE5	1.0e-44	59.38	MADS-box protein FBP24 OS=Petunia hybrida OX=4102 GN=FBP24 PE=1 SV=1	[more]
Q8RVL4	3.0e-41	56.25	MADS-box protein defh21 OS=Antirrhinum majus OX=4151 GN=DEFH21 PE=2 SV=1	[more]
Q8RYD9	2.0e-37	53.70	Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana OX=3702 GN=TT16 PE=1 SV=1	[more]
Q8VWM8	1.3e-36	48.45	MADS-box protein ZMM17 OS=Zea mays OX=4577 GN=M17 PE=2 SV=1	[more]
Q9XGJ4	1.7e-36	50.31	MADS-box protein GGM13 OS=Gnetum gnemon OX=3382 GN=GGM13 PE=2 SV=1	[more]

BLAST of Moc01g34350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYP1	9.6e-83	100.00	MADS-box protein FBP24 OS=Momordica charantia OX=3673 GN=LOC111015797 PE=4 SV=1	[more]
A0A6J1KTV0	9.0e-57	75.78	MADS-box protein FBP24-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114971...	[more]
A0A6J1ELC6	3.4e-56	75.16	MADS-box protein FBP24-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1KX33	2.2e-55	75.31	MADS-box protein FBP24-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114971...	[more]
A0A6J1EEN0	8.5e-55	74.69	MADS-box protein FBP24-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of Moc01g34350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23260.2	1.4e-38	53.70	K-box region and MADS-box transcription factor family protein	[more]
AT5G23260.1	5.6e-35	51.85	K-box region and MADS-box transcription factor family protein	[more]
AT5G23260.3	3.6e-34	49.38	K-box region and MADS-box transcription factor family protein	[more]
AT5G60910.1	2.1e-29	40.99	AGAMOUS-like 8	[more]
AT1G26310.1	4.6e-29	40.24	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 99..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..200
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..163
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 72.22 coord: 38..59 score: 54.74 coord: 3..23 score: 68.53
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 3.4E-40 score: 149.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.4E-24 score: 85.4
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 30.150955
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 92..162 e-value: 9.1E-16 score: 57.8
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 92..195 score: 10.801958
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..75 e-value: 1.3E-25 score: 90.9
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..72
IPR031050	MADS-box protein FBP24/AGL63/defh21-like	PANTHER	PTHR11945:SF537	MADS-BOX TRANSCRIPTION FACTOR	coord: 1..163
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..72 e-value: 4.40302E-42 score: 134.602

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g34350.1	Moc01g34350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0048316	seed development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding