Moc01g33350 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g33350
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	50S ribosomal protein HLP
Location	chr1: 23503013 .. 23504872 (+)
RNA-Seq Expression	Moc01g33350
Synteny	Moc01g33350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTGCTTTTGCTTCCAAATGTTCCCGCGGTATGCAATTTTCTGAAAGTTCAAGTGGATGCTGGAATTTTTCTTCATCTTTGTTCTTTGATTTGGAGCTAGAAGCTTTGTTGCCTTTTCTTTTCGGGTTTTCTACTCGTGTTGGACCTTAATTTCACTTGATTTATCTTAGGAAATGAAAGGTTTAATGATTCTTTCGATTGATAGCAAAGCTTGTGTATAATTTGATTTTGTTCCGGAATTTTGGCCGAGAGACTGCTTTGTTTACACTTTAACCGTAATTGCTCTTGTTTTGATGTTGTTATATTATTTTTACAATGCTTTTCAGCATATACATGTTTATAAAACCATTGTGGATCCCTTCAAGAAGAATTCCTGTCATGGTAGCTCATGAGGAAGATTGATGGAACAATTTTGAGAGTCGCAGAAAATGATTATTCTTCTCCTAGGAATCCTTAGAATCCTACATTTGAATCTTAAACACAGCATGGATTTCAATTGAGAAGAACTTTCTTCCAAAGTTTTTCCTTCACCGTAACGTTTGAAACTCTTCCATGAACAAATGATCCATAAGGAAAAGCTTGGCCCAGTTAATTCCTAAAGTAAAACTAAGTTGCGCCATATAACACTTGGCATGTATTACTCCGGCTCTTCTGTATAGTCAGTCGTCTTTGACCTAAACCTGTGTAGTGTCTTTGTTTTCAGCCACGCTCTTGTACTCAGACGTGTGATCTTCTCCCCCTTTTATATGTGTAAAGAGAGAGACGCCTCTGTAATGTTAATTTCCTGTCATCGTCAACTATCCATTGGAACCTGTAAGCTGTATGAAAGTGGGATTATTTTACATTTTGCAACATGTTAATTTTTAGTCCTTTTTCTTACTATTGCTCTCTGAACCTGATCGTTTGAGCACACCATGGTGTAAAATTTCCTTCACTGTGACAGTTCTCTCTGTTATTTGTCTTAATTCTTTAGTTTTGAATTTCTAGCTGCCGTGAAACTCATGTTGGTTCTTTGTTTCTTGAAAATTGAACTAGTGGGCCGTTCACTGTTGGGTGGACTTGGAAACAATCTGCCTGGTTTATTGAGCACAGCGCAGGAGACAGTATGCAGTAGTTTCATCTCGCAGGTCTGATTCTCTGAAATTTTAATCTTCCCATCTAACTTTCAATCCTAAAAATTAGAATTGAAAGGAAAAAAATAAATGTGTAGAATAATCACATGCATGATGAGATTTGTGCCTCTGTCAATAGCTACTATCTAAAAAAACAAGTATGGGGTAGGGCTATAAAAGAGGCATTTACTTGTTATGAGGCTTGTGGTGTTATATAACTGTCACGGTTTGAAATTTATTTGAAGAGATAATATTGAAATTCTAAAATCATTGTGAGTGGCATAAAATCTTGAGGAAATATTGGTACGCTTATGAGTCAGGATCAATTTATAGCTGCGCTGACCTTGTGTATTGTTATCTTTTGCAGCAACAAAGAACTTTCATACAGATGAGGACTGTGCTTAAAGTAGTGGACAACTCGGGGGCAAAAAAGGTGATGTGCATACAAGCTTTGAAGGGAAAGAAAGGAGCAAGACTCGGAGACACGATAGTCGCATCAGTGAAGGAAGCCCATCCTAATGGAAAAGTGAAGAAAGGGAAGGTTGTATATGGAGTGGTTGTGCGAGCTGCAATGCAAAAAGGTCGCTGCGATGGGAGTGAGGTCAAGTTTGATGATAATGCTGTAGTCCTTGTTGATAAGCAAGGCCAGCCCATCGGGACGAGAGTGTTCGGTCCAGTTCCTCACGAACTCAGGAAGAAAAAGCACGTAAAGATTCTTACTTTGGCAGAGCACATTGCTTGA

mRNA sequence

ATGGCTGCTGCTTTTGCTTCCAAATGTTCCCGCGTGGGCCGTTCACTGTTGGGTGGACTTGGAAACAATCTGCCTGGTTTATTGAGCACAGCGCAGGAGACAGTATGCAGTAGTTTCATCTCGCAGCAACAAAGAACTTTCATACAGATGAGGACTGTGCTTAAAGTAGTGGACAACTCGGGGGCAAAAAAGGTGATGTGCATACAAGCTTTGAAGGGAAAGAAAGGAGCAAGACTCGGAGACACGATAGTCGCATCAGTGAAGGAAGCCCATCCTAATGGAAAAGTGAAGAAAGGGAAGGTTGTATATGGAGTGGTTGTGCGAGCTGCAATGCAAAAAGGTCGCTGCGATGGGAGTGAGGTCAAGTTTGATGATAATGCTGTAGTCCTTGTTGATAAGCAAGGCCAGCCCATCGGGACGAGAGTGTTCGGTCCAGTTCCTCACGAACTCAGGAAGAAAAAGCACGTAAAGATTCTTACTTTGGCAGAGCACATTGCTTGA

Coding sequence (CDS)

ATGGCTGCTGCTTTTGCTTCCAAATGTTCCCGCGTGGGCCGTTCACTGTTGGGTGGACTTGGAAACAATCTGCCTGGTTTATTGAGCACAGCGCAGGAGACAGTATGCAGTAGTTTCATCTCGCAGCAACAAAGAACTTTCATACAGATGAGGACTGTGCTTAAAGTAGTGGACAACTCGGGGGCAAAAAAGGTGATGTGCATACAAGCTTTGAAGGGAAAGAAAGGAGCAAGACTCGGAGACACGATAGTCGCATCAGTGAAGGAAGCCCATCCTAATGGAAAAGTGAAGAAAGGGAAGGTTGTATATGGAGTGGTTGTGCGAGCTGCAATGCAAAAAGGTCGCTGCGATGGGAGTGAGGTCAAGTTTGATGATAATGCTGTAGTCCTTGTTGATAAGCAAGGCCAGCCCATCGGGACGAGAGTGTTCGGTCCAGTTCCTCACGAACTCAGGAAGAAAAAGCACGTAAAGATTCTTACTTTGGCAGAGCACATTGCTTGA

Protein sequence

MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA

Homology

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BLAST of Moc01g33350 vs. NCBI nr
Match: XP_022146696.1 (50S ribosomal protein HLP, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 323.6 bits (828), Expect = 1.0e-84
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]

BLAST of Moc01g33350 vs. NCBI nr
Match: XP_022926089.1 (50S ribosomal protein HLP, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 159/166 (95.78%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAAFASKCSRVGRSLLGGLG NL G L+ + ETVCSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAAFASKCSRVGRSLLGGLGKNLSGSLTASNETVCSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]

BLAST of Moc01g33350 vs. NCBI nr
Match: XP_022978898.1 (50S ribosomal protein HLP, mitochondrial-like [Cucurbita maxima] >KAG6581441.1 50S ribosomal protein HLP, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307.4 bits (786), Expect = 7.6e-80
Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAA ASKCSRVGRSLLGGLG NL G L+ + ETVCSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAALASKCSRVGRSLLGGLGKNLSGSLTASNETVCSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]

BLAST of Moc01g33350 vs. NCBI nr
Match: XP_023545147.1 (50S ribosomal protein HLP, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.4 bits (786), Expect = 7.6e-80
Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAAFASKCSRVGRSLLGGLG NL G L+ +  TVCSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAAFASKCSRVGRSLLGGLGKNLSGSLTASNATVCSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]

BLAST of Moc01g33350 vs. NCBI nr
Match: KAG6594454.1 (50S ribosomal protein HLP, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79
Identity = 158/165 (95.76%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 2   AAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNSG 61
           AA+FASKCSRVGRSLLGGLGN L G LS++ ETVCSSFISQQQRTFIQMRTVLKVVDNSG
Sbjct: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQRTFIQMRTVLKVVDNSG 62

Query: 62  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 121
           AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV
Sbjct: 63  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 122

Query: 122 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           KFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 123 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167

[Close]

BLAST of Moc01g33350 vs. ExPASy Swiss-Prot
Match: Q93Z17 (50S ribosomal protein HLP, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HLP PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 4.4e-62
Identity = 132/175 (75.43%), Postives = 146/175 (83.43%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQ--RTFIQMRTVLKVVD 60
           MAAAFAS+ +R GRSLLGGL N   G ++++   +  S +SQQQ  RTFIQM TVLKVVD
Sbjct: 1   MAAAFASRLTRGGRSLLGGLNNG--GSMNSSNGMMNESILSQQQQRRTFIQMGTVLKVVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDG 120
           NSGAKKVMCIQALKGKKGARLGDTIVASVKEA PNGKVKKG VVYGVVVRAAMQ+GR DG
Sbjct: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDG 120

Query: 121 SEVKFDDNAVVLVDKQG-------QPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           SEV+FDDNAVVLVD +        QPIGTRVFGPVPHELRKKKH+KIL LA+H+A
Sbjct: 121 SEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 173

[Close]

BLAST of Moc01g33350 vs. ExPASy Swiss-Prot
Match: Q84JG5 (50S ribosomal protein HLL, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HLL PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-48
Identity = 117/196 (59.69%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCS-SFISQQQ-RTFIQMRTVLKVVD 60
           MA A ASK S+ GRSLLGGL N   GL++++   + + S +SQQQ RTFIQM T+LK VD
Sbjct: 1   MATALASKLSK-GRSLLGGLCNAFSGLMNSSSNGMMNGSILSQQQHRTFIQMGTILKCVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAH------------PNGKVKKGKVVYGVV 120
           NS AK+VMCIQ+L+GKKGARLGD IV SVKEA+            P GKVKKG VVYGVV
Sbjct: 61  NSCAKEVMCIQSLRGKKGARLGDIIVGSVKEANPIVQKKVKKDAIPKGKVKKGMVVYGVV 120

Query: 121 VRAAMQKGRCDGSEVKFDDNAVVLV---DKQG--------------QPIGTRVFGPVPHE 166
           VRAAM KGR DGS+VKFDDNA+V+V   +K+G              QP GTRVFGPVPHE
Sbjct: 121 VRAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQPTGTRVFGPVPHE 180

[Close]

BLAST of Moc01g33350 vs. ExPASy Swiss-Prot
Match: A8GVC4 (50S ribosomal protein L14 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=rplN PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.8e-32
Identity = 73/120 (60.83%), Postives = 91/120 (75.83%), Query Frame = 0


Query: 48  IQMRTVLKVVDNSGAKKVMCIQALKGKKG--ARLGDTIVASVKEAHPNGKVKKGKVVYGV 107
           IQM+++L+V DNSGAKKVMCI+ L G     A+LGD IV S+KEA P GKVKKG V  GV
Sbjct: 2   IQMQSILEVADNSGAKKVMCIKVLGGSHHMVAKLGDVIVVSIKEAIPGGKVKKGDVYKGV 61

Query: 108 VVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 166
           +VR      R DGS +KFD NA+VL++KQ +PIGTRVFGPV  ELR KK+V+I++LAE +
Sbjct: 62  IVRTKTGVVRADGSTIKFDKNALVLLNKQDEPIGTRVFGPVTRELRAKKYVRIMSLAEEV 121

[Close]

BLAST of Moc01g33350 vs. ExPASy Swiss-Prot
Match: Q1RHN1 (50S ribosomal protein L14 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=rplN PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.8e-32
Identity = 73/120 (60.83%), Postives = 91/120 (75.83%), Query Frame = 0


Query: 48  IQMRTVLKVVDNSGAKKVMCIQALKGKKG--ARLGDTIVASVKEAHPNGKVKKGKVVYGV 107
           IQM+++L+V DNSGAKKVMCI+ L G     A+LGD IV S+KEA P GKVKKG V  GV
Sbjct: 2   IQMQSILEVADNSGAKKVMCIKVLGGSHHMVAKLGDVIVVSIKEAIPGGKVKKGDVYKGV 61

Query: 108 VVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 166
           +VR      R DGS +KFD NA+VL++KQ +PIGTRVFGPV  ELR KK+V+I++LAE +
Sbjct: 62  IVRTKTGVVRADGSTIKFDKNALVLLNKQDEPIGTRVFGPVTRELRAKKYVRIMSLAEEV 121

[Close]

BLAST of Moc01g33350 vs. ExPASy Swiss-Prot
Match: Q9ZCR5 (50S ribosomal protein L14 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=rplN PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.6e-32
Identity = 73/120 (60.83%), Postives = 91/120 (75.83%), Query Frame = 0


Query: 48  IQMRTVLKVVDNSGAKKVMCIQALKGKKG--ARLGDTIVASVKEAHPNGKVKKGKVVYGV 107
           IQM+++L+V DNSGAKKVMCI+ L G     A+LGD IV S+KEA P GKVKKG V  GV
Sbjct: 2   IQMQSILEVADNSGAKKVMCIKVLGGSHHMMAKLGDVIVVSIKEAIPGGKVKKGDVYKGV 61

Query: 108 VVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 166
           +VR      R DGS +KFD NA+VL++KQ +PIGTRVFGPV  ELR KK+V+I++LAE +
Sbjct: 62  IVRTKTGVVRSDGSTIKFDKNALVLLNKQDEPIGTRVFGPVTRELRAKKYVRIMSLAEEV 121

[Close]

BLAST of Moc01g33350 vs. ExPASy TrEMBL
Match: A0A6J1D048 (50S ribosomal protein HLP, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015838 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.0e-85
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]

BLAST of Moc01g33350 vs. ExPASy TrEMBL
Match: A0A6J1EE21 (50S ribosomal protein HLP, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111433311 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.4e-81
Identity = 159/166 (95.78%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAAFASKCSRVGRSLLGGLG NL G L+ + ETVCSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAAFASKCSRVGRSLLGGLGKNLSGSLTASNETVCSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]

BLAST of Moc01g33350 vs. ExPASy TrEMBL
Match: A0A6J1IUK7 (50S ribosomal protein HLP, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111478713 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.7e-80
Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS 60
           MAAA ASKCSRVGRSLLGGLG NL G L+ + ETVCSSFISQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAALASKCSRVGRSLLGGLGKNLSGSLTASNETVCSSFISQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]

BLAST of Moc01g33350 vs. ExPASy TrEMBL
Match: A0A6J1EJP6 (50S ribosomal protein HLP, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111433926 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79
Identity = 157/165 (95.15%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 2   AAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNSG 61
           AA+FASKCSRVGRSLLGGLGN L G LS++ ETVCSSFISQQQRTFIQMRTVLKVVDNSG
Sbjct: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQRTFIQMRTVLKVVDNSG 62

Query: 62  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 121
           AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV
Sbjct: 63  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 122

Query: 122 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           KFDDNAVV VDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 123 KFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167

[Close]

BLAST of Moc01g33350 vs. ExPASy TrEMBL
Match: A0A1S4DUR6 (50S ribosomal protein HLP, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC107990521 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.4e-79
Identity = 157/166 (94.58%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQRTFIQMRTVLKVVDNS 60
           MA+AFASK SRVGRSLLGGLGNNL G L+T+ ETVC+SFI QQQRTFIQMRTVLKVVDNS
Sbjct: 1   MASAFASKFSRVGRSLLGGLGNNLYGSLTTSNETVCNSFIMQQQRTFIQMRTVLKVVDNS 60

Query: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120
           GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

[Close]

BLAST of Moc01g33350 vs. TAIR 10
Match: AT5G46160.2 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 239.2 bits (609), Expect = 2.4e-63
Identity = 132/174 (75.86%), Postives = 146/174 (83.91%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQ-RTFIQMRTVLKVVDN 60
           MAAAFAS+ +R GRSLLGGL N   G ++++   +  S +SQQQ RTFIQM TVLKVVDN
Sbjct: 1   MAAAFASRLTRGGRSLLGGLNNG--GSMNSSNGMMNESILSQQQRRTFIQMGTVLKVVDN 60

Query: 61  SGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGS 120
           SGAKKVMCIQALKGKKGARLGDTIVASVKEA PNGKVKKG VVYGVVVRAAMQ+GR DGS
Sbjct: 61  SGAKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDGS 120

Query: 121 EVKFDDNAVVLVDKQG-------QPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           EV+FDDNAVVLVD +        QPIGTRVFGPVPHELRKKKH+KIL LA+H+A
Sbjct: 121 EVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 172

[Close]

BLAST of Moc01g33350 vs. TAIR 10
Match: AT5G46160.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 238.8 bits (608), Expect = 3.1e-63
Identity = 132/175 (75.43%), Postives = 146/175 (83.43%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCSSFISQQQ--RTFIQMRTVLKVVD 60
           MAAAFAS+ +R GRSLLGGL N   G ++++   +  S +SQQQ  RTFIQM TVLKVVD
Sbjct: 1   MAAAFASRLTRGGRSLLGGLNNG--GSMNSSNGMMNESILSQQQQRRTFIQMGTVLKVVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDG 120
           NSGAKKVMCIQALKGKKGARLGDTIVASVKEA PNGKVKKG VVYGVVVRAAMQ+GR DG
Sbjct: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDG 120

Query: 121 SEVKFDDNAVVLVDKQG-------QPIGTRVFGPVPHELRKKKHVKILTLAEHIA 167
           SEV+FDDNAVVLVD +        QPIGTRVFGPVPHELRKKKH+KIL LA+H+A
Sbjct: 121 SEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 173

[Close]

BLAST of Moc01g33350 vs. TAIR 10
Match: AT1G17560.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-49
Identity = 117/196 (59.69%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 1   MAAAFASKCSRVGRSLLGGLGNNLPGLLSTAQETVCS-SFISQQQ-RTFIQMRTVLKVVD 60
           MA A ASK S+ GRSLLGGL N   GL++++   + + S +SQQQ RTFIQM T+LK VD
Sbjct: 1   MATALASKLSK-GRSLLGGLCNAFSGLMNSSSNGMMNGSILSQQQHRTFIQMGTILKCVD 60

Query: 61  NSGAKKVMCIQALKGKKGARLGDTIVASVKEAH------------PNGKVKKGKVVYGVV 120
           NS AK+VMCIQ+L+GKKGARLGD IV SVKEA+            P GKVKKG VVYGVV
Sbjct: 61  NSCAKEVMCIQSLRGKKGARLGDIIVGSVKEANPIVQKKVKKDAIPKGKVKKGMVVYGVV 120

Query: 121 VRAAMQKGRCDGSEVKFDDNAVVLV---DKQG--------------QPIGTRVFGPVPHE 166
           VRAAM KGR DGS+VKFDDNA+V+V   +K+G              QP GTRVFGPVPHE
Sbjct: 121 VRAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQPTGTRVFGPVPHE 180

[Close]

BLAST of Moc01g33350 vs. TAIR 10
Match: ATCG00780.1 (ribosomal protein L14 )

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23
Identity = 52/120 (43.33%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 48  IQMRTVLKVVDNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGV 107
           IQ +T L V DNSGA+++MCI+ +    ++ A +GD IVA +KEA PN  +++ +V+  V
Sbjct: 2   IQPQTYLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAV 61

Query: 108 VVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 166
           +VR   +  R +G+ +++DDNA V++D++G P GTRVFG +P ELR+    KI++LA  +
Sbjct: 62  IVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPEV 121

[Close]

BLAST of Moc01g33350 vs. TAIR 10
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.2e-07
Identity = 36/109 (33.03%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 48  IQMRTVLKVVDNSGAKKVMCIQALKGKKG-------ARLGDTIVASVKEAHPNGKVKKGK 107
           + +   +   DN+GAK +  I ++KG KG       A +GD ++A+VK+  P+    + K
Sbjct: 20  LPVAATVNCADNTGAKNLYII-SVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKK 79

Query: 108 VVYGVVVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHE 150
           V+  V+VR      R DG  + F+DNA V+V+ +G+  G+ + GP+  E
Sbjct: 80  VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124

The following BLAST results are available for this feature:

BLAST of Moc01g33350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146696.1	1.0e-84	100.00	50S ribosomal protein HLP, mitochondrial isoform X2 [Momordica charantia]	[more]
XP_022926089.1	1.5e-80	95.78	50S ribosomal protein HLP, mitochondrial-like [Cucurbita moschata]	[more]
XP_022978898.1	7.6e-80	95.18	50S ribosomal protein HLP, mitochondrial-like [Cucurbita maxima] >KAG6581441.1 5...	[more]
XP_023545147.1	7.6e-80	95.18	50S ribosomal protein HLP, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
KAG6594454.1	1.0e-79	95.76	50S ribosomal protein HLP, mitochondrial, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Moc01g33350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z17	4.4e-62	75.43	50S ribosomal protein HLP, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HLP ...	[more]
Q84JG5	1.6e-48	59.69	50S ribosomal protein HLL, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HLL ...	[more]
A8GVC4	2.8e-32	60.83	50S ribosomal protein L14 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=...	[more]
Q1RHN1	2.8e-32	60.83	50S ribosomal protein L14 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=rp...	[more]
Q9ZCR5	3.6e-32	60.83	50S ribosomal protein L14 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 G...	[more]

BLAST of Moc01g33350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D048	5.0e-85	100.00	50S ribosomal protein HLP, mitochondrial isoform X2 OS=Momordica charantia OX=36...	[more]
A0A6J1EE21	7.4e-81	95.78	50S ribosomal protein HLP, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1IUK7	3.7e-80	95.18	50S ribosomal protein HLP, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EJP6	1.4e-79	95.15	50S ribosomal protein HLP, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S4DUR6	2.4e-79	94.58	50S ribosomal protein HLP, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC1079...	[more]

BLAST of Moc01g33350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46160.2	2.4e-63	75.86	Ribosomal protein L14p/L23e family protein	[more]
AT5G46160.1	3.1e-63	75.43	Ribosomal protein L14p/L23e family protein	[more]
AT1G17560.1	1.1e-49	59.69	Ribosomal protein L14p/L23e family protein	[more]
ATCG00780.1	1.4e-23	43.33	ribosomal protein L14	[more]
AT1G04480.1	3.2e-07	33.03	Ribosomal protein L14p/L23e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000218	Ribosomal protein L14P	SMART	SM01374	Ribosomal_L14_2	coord: 47..166 e-value: 8.3E-63 score: 224.6
IPR000218	Ribosomal protein L14P	PFAM	PF00238	Ribosomal_L14	coord: 48..165 e-value: 5.1E-50 score: 168.5
IPR000218	Ribosomal protein L14P	PANTHER	PTHR11761	50S/60S RIBOSOMAL PROTEIN L14/L23	coord: 19..166
IPR000218	Ribosomal protein L14P	HAMAP	MF_01367	Ribosomal_L14	coord: 47..166 score: 23.573132
IPR005745	Ribosomal protein L14P, bacterial-type	TIGRFAM	TIGR01067	TIGR01067	coord: 48..165 e-value: 1.8E-43 score: 145.3
IPR036853	Ribosomal protein L14 superfamily	GENE3D	2.40.150.20	Ribosomal protein L14	coord: 47..166 e-value: 9.2E-48 score: 163.2
IPR036853	Ribosomal protein L14 superfamily	SUPERFAMILY	50193	Ribosomal protein L14	coord: 48..165
None	No IPR available	PANTHER	PTHR11761:SF38	50S RIBOSOMAL PROTEIN HLP, MITOCHONDRIAL-LIKE ISOFORM X1	coord: 19..166
IPR019972	Ribosomal protein L14P, conserved site	PROSITE	PS00049	RIBOSOMAL_L14	coord: 104..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g33350.1	Moc01g33350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome