Moc01g30170 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc01g30170
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr1: 21298340 .. 21299302 (+)
RNA-Seq ExpressionMoc01g30170
SyntenyMoc01g30170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTGTGTTTATTGGTCGGTCAAATTCAATGTTCCTGGTGGAGATGATGCCTCAGCCGTGTTGGATTATTTAACCTTGTGATGCTTGATTGTTCTTCGTCTTCCTAACGATCCTGTTTAGAGAGAAACAGAAACTCCATCATCGGTTGTGAAGATGGAAGAATTAGGGGAAGGGCCGGAGTTGAGCAGAACGCAGAGGGAAAGAGAACGACGCCGTGTAAGGGACAGGGAGAGAAGATCGTCGATGAGCATGGAACAGAGAGAGAGGCACCTCGCAAGACGCCGACGAAACTATCAACTACGAAGACTCAGATCTCGAAGCCTGAGAACAAAGATCCCCCGTTCGAAATGGCGGAAACCAATTCGCATCAGGCTCATACTTCCATCGCAGAGCTTGATCAGCAACGAAATGGCCTTACGCTCATCGGCTTCAACCACCAACAAGACGCCATTGTTCCATCTTCAGGTCAGCACTCGGAACATCTAAATACGATCTTCCCAACCCTAGCCTGGATAATTTCCGACTCTAATGCCGAATTCTTCTGATAGGTTCTGAAGCTCTGGACTCAAAAGCTGCAGATCTCCATGGAAGGGTGCGATTGAATCACATCGTGGCTCGATCAATTATCCACACAAGTAGTGAGCCAATTGGAATTCACCAAATTTTAGCGCAGGTGGGCTCGGTGGAAGATTCAAATTGCAATTGTAAGCCTGAGAATCATAGCTGCAACCTTTCAGATATGCAAATTGGGGAAAATGATTCAAGTAGATCACCCAAAGTGTTGCGGCTAAATCGCGTCAAACATCTCGTGAGGATGATGAATTCTTCTGTAAACCCATCTCCCGATCCACAGCATCAAACTAGTATTGCAGGTAGTGAAAATTTTTGAAGTTCCATATTCTCTCTTTTCAAAACTTCATCTGTGTGTGTTAATGCACCGAGCTTCACATTTCAGGGTAA

mRNA sequence

ATGTTGTGTGTTTATTGGTCGGTCAAATTCAATGTTCCTGGTGGAGATGATGCCTCAGCCGTAAACTCCATCATCGGTTGTGAAGATGGAAGAATTAGGGGAAGGGCCGGAGTTGAGCAGAACGCAGAGGGAAAGAGAACGACGCCGTGTAAGGGACAGGGAGAGAAGATCGTCGATGAGCATGGAACAGAGAGAGAGGCACCTCGCAAGACGCCGACGAAACTATCAACTACGAAGACTCAGATCTCGAAGCCTGAGAACAAAGATCCCCCGTTCGAAATGGCGGAAACCAATTCGCATCAGGCTCATACTTCCATCGCAGAGCTTGATCAGCAACGAAATGGCCTTACGCTCATCGGCTTCAACCACCAACAAGACGCCATTGTTCCATCTTCAGGTTCTGAAGCTCTGGACTCAAAAGCTGCAGATCTCCATGGAAGGGTGCGATTGAATCACATCGTGGCTCGATCAATTATCCACACAAGTAGTGAGCCAATTGGAATTCACCAAATTTTAGCGCAGGTGGGCTCGGTGGAAGATTCAAATTGCAATTGTAAGCCTGAGAATCATAGCTGCAACCTTTCAGATATGCAAATTGGGGAAAATGATTCAAGTAGATCACCCAAAGTGTTGCGGCTAAATCGCGTCAAACATCTCGTGAGGATGATGAATTCTTCTGTAAACCCATCTCCCGATCCACAGCATCAAACTAGTATTGCAGGGTAA

Coding sequence (CDS)

ATGTTGTGTGTTTATTGGTCGGTCAAATTCAATGTTCCTGGTGGAGATGATGCCTCAGCCGTAAACTCCATCATCGGTTGTGAAGATGGAAGAATTAGGGGAAGGGCCGGAGTTGAGCAGAACGCAGAGGGAAAGAGAACGACGCCGTGTAAGGGACAGGGAGAGAAGATCGTCGATGAGCATGGAACAGAGAGAGAGGCACCTCGCAAGACGCCGACGAAACTATCAACTACGAAGACTCAGATCTCGAAGCCTGAGAACAAAGATCCCCCGTTCGAAATGGCGGAAACCAATTCGCATCAGGCTCATACTTCCATCGCAGAGCTTGATCAGCAACGAAATGGCCTTACGCTCATCGGCTTCAACCACCAACAAGACGCCATTGTTCCATCTTCAGGTTCTGAAGCTCTGGACTCAAAAGCTGCAGATCTCCATGGAAGGGTGCGATTGAATCACATCGTGGCTCGATCAATTATCCACACAAGTAGTGAGCCAATTGGAATTCACCAAATTTTAGCGCAGGTGGGCTCGGTGGAAGATTCAAATTGCAATTGTAAGCCTGAGAATCATAGCTGCAACCTTTCAGATATGCAAATTGGGGAAAATGATTCAAGTAGATCACCCAAAGTGTTGCGGCTAAATCGCGTCAAACATCTCGTGAGGATGATGAATTCTTCTGTAAACCCATCTCCCGATCCACAGCATCAAACTAGTATTGCAGGGTAA

Protein sequence

MLCVYWSVKFNVPGGDDASAVNSIIGCEDGRIRGRAGVEQNAEGKRTTPCKGQGEKIVDEHGTEREAPRKTPTKLSTTKTQISKPENKDPPFEMAETNSHQAHTSIAELDQQRNGLTLIGFNHQQDAIVPSSGSEALDSKAADLHGRVRLNHIVARSIIHTSSEPIGIHQILAQVGSVEDSNCNCKPENHSCNLSDMQIGENDSSRSPKVLRLNRVKHLVRMMNSSVNPSPDPQHQTSIAG
Homology
BLAST of Moc01g30170 vs. NCBI nr
Match: XP_022949888.1 (uncharacterized protein LOC111453147 [Cucurbita moschata] >KAG6603823.1 hypothetical protein SDJN03_04432, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.8 bits (338), Expect = 9.8e-28
Identity = 94/175 (53.71%), Postives = 110/175 (62.86%), Query Frame = 0

Query: 74  KLSTTKTQISKPENKDPPFEMAETNSHQ--AHTSIAELDQQRNGLTLIGFNHQQDAIVPS 133
           +L +   + S P +   P EMAETNSHQ  A TSIAELD QRNG+TLI FNH+Q   + S
Sbjct: 46  RLRSRSVRASNP-SVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQQ--MTS 105

Query: 134 SGSEALDSKAADLHGRVRLNHI--VARSIIHTSSEPIGIHQILAQVGSVEDSNCNCKPEN 193
           SGSE LD KA  L GRVRL+HI  +ARS        IGIHQ++    S+E+SN NCK E+
Sbjct: 106 SGSETLDPKAEILQGRVRLSHIRRLARS--------IGIHQMM---DSMEESNGNCKSED 165

Query: 194 HSCNLSDMQIGENDSSRSPKVLRLNRVKHLVRMMNSSVNPSPDPQ---HQTSIAG 242
           HS         E D  RS K LRLNRVKHL R MNSS  PS  P    +QT+IAG
Sbjct: 166 HSL--------ECDPRRSSKALRLNRVKHLARKMNSSAKPSAVPDESLNQTAIAG 198

BLAST of Moc01g30170 vs. NCBI nr
Match: KAG7034004.1 (hypothetical protein SDJN02_03730, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-27
Identity = 94/175 (53.71%), Postives = 110/175 (62.86%), Query Frame = 0

Query: 74  KLSTTKTQISKPENKDPPFEMAETNSHQ--AHTSIAELDQQRNGLTLIGFNHQQDAIVPS 133
           +L +   + S P +   P EMAETNSHQ  A TSIAELD QRNG+TLI FNH+Q   + S
Sbjct: 46  RLRSRSVRASNP-SVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQ---MTS 105

Query: 134 SGSEALDSKAADLHGRVRLNHI--VARSIIHTSSEPIGIHQILAQVGSVEDSNCNCKPEN 193
           SGSE LD KA  L GRVRL+HI  +ARS        IGIHQ++    S+E+SN NCK E+
Sbjct: 106 SGSETLDPKAEILQGRVRLSHIRRLARS--------IGIHQMM---DSMEESNGNCKSED 165

Query: 194 HSCNLSDMQIGENDSSRSPKVLRLNRVKHLVRMMNSSVNPSPDPQ---HQTSIAG 242
           HS         E D  RS K LRLNRVKHL R MNSS  PS  P    +QT+IAG
Sbjct: 166 HSL--------ECDPRRSSKALRLNRVKHLARKMNSSAKPSAVPDESLNQTAIAG 197

BLAST of Moc01g30170 vs. NCBI nr
Match: XP_022978880.1 (uncharacterized protein LOC111478702 [Cucurbita maxima] >XP_022978881.1 uncharacterized protein LOC111478702 [Cucurbita maxima])

HSP 1 Score: 133.3 bits (334), Expect = 2.9e-27
Identity = 90/157 (57.32%), Postives = 104/157 (66.24%), Query Frame = 0

Query: 91  PFEMAETNSHQ--AHTSIAELDQQRNGLTLIGFNHQQDAIVPSSGSEALDSKAADLHGRV 150
           P EMAETNS+Q  A TSIAELD QRNGLTLI FNH+Q   + SSGSE LD KA  L GRV
Sbjct: 62  PIEMAETNSNQTVAETSIAELDLQRNGLTLIDFNHEQQ--LTSSGSETLDPKAEILQGRV 121

Query: 151 RLNHI--VARSIIHTSSEPIGIHQILAQVGSVEDSNCNCKPENHSCNLSDMQIGENDSSR 210
           RL+HI  +ARS        IGIHQ++    S+E+S  NCK E+HS         E D  R
Sbjct: 122 RLSHIRRLARS--------IGIHQMM---DSMEESTGNCKSEDHSL--------ECDPRR 181

Query: 211 SPKVLRLNRVKHLVRMMNSSVNPS--PDPQHQTSIAG 242
           S K LRLNRVKHL R +NSSV PS   + Q+QT+IAG
Sbjct: 182 SSKALRLNRVKHLARKINSSVKPSAADESQNQTAIAG 197

BLAST of Moc01g30170 vs. NCBI nr
Match: XP_023543050.1 (uncharacterized protein LOC111803033 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.5 bits (332), Expect = 4.9e-27
Identity = 89/158 (56.33%), Postives = 102/158 (64.56%), Query Frame = 0

Query: 91  PFEMAETNSHQ--AHTSIAELDQQRNGLTLIGFNHQQDAIVPSSGSEALDSKAADLHGRV 150
           P EMAETNSHQ  A TSIAELD QRNGLTLI FNH+Q   + SSGSE LD KA  L GRV
Sbjct: 62  PIEMAETNSHQTVAETSIAELDLQRNGLTLIDFNHEQQ--MTSSGSETLDPKAEILQGRV 121

Query: 151 RLNHI--VARSIIHTSSEPIGIHQILAQVGSVEDSNCNCKPENHSCNLSDMQIGENDSSR 210
           RL+HI  +ARS        IGIHQ++    S+ +S  NCK E+HS         E D  +
Sbjct: 122 RLSHIRRLARS--------IGIHQMM---DSMAESTGNCKSEDHSL--------ECDQRK 181

Query: 211 SPKVLRLNRVKHLVRMMNSSVNPS---PDPQHQTSIAG 242
           S K LRLNRVKHL R MNSS  PS    + Q+QT+IAG
Sbjct: 182 SSKALRLNRVKHLARKMNSSAKPSAAEDESQNQTAIAG 198

BLAST of Moc01g30170 vs. NCBI nr
Match: XP_038881721.1 (uncharacterized protein LOC120073145 isoform X1 [Benincasa hispida] >XP_038881722.1 uncharacterized protein LOC120073145 isoform X1 [Benincasa hispida])

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-26
Identity = 82/147 (55.78%), Postives = 97/147 (65.99%), Query Frame = 0

Query: 102 AHTSIAELDQQRNGLTLIGFNHQQDAIVP----SSGSEALDSKAADLHGRVRLNHI--VA 161
           A TSIAELD QRNGLTL+GFNH+Q+++ P    SS  E L  KA    GRVRL+HI  +A
Sbjct: 69  AETSIAELDLQRNGLTLVGFNHEQESLNPDSTMSSSFETLGPKAETFQGRVRLSHIRRLA 128

Query: 162 RSIIHTSSEPIGIHQILAQVGSVEDSNCNCKPENHSCNLSDMQIGENDSSRSPKVLRLNR 221
           RS        IGIHQ+ +Q+  VE+S  NCK E       D+ + E D SRS KVLRLN 
Sbjct: 129 RS--------IGIHQMYSQMSFVEESTSNCKCE-------DLNL-EYDQSRSSKVLRLNH 188

Query: 222 VKHLVRMMNSSVNPSPD-PQHQTSIAG 242
           +KHL RMMNSSV PS D  QHQT+IAG
Sbjct: 189 IKHLARMMNSSVKPSTDESQHQTTIAG 199

BLAST of Moc01g30170 vs. ExPASy TrEMBL
Match: A0A6J1GDC8 (uncharacterized protein LOC111453147 OS=Cucurbita moschata OX=3662 GN=LOC111453147 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.8e-28
Identity = 94/175 (53.71%), Postives = 110/175 (62.86%), Query Frame = 0

Query: 74  KLSTTKTQISKPENKDPPFEMAETNSHQ--AHTSIAELDQQRNGLTLIGFNHQQDAIVPS 133
           +L +   + S P +   P EMAETNSHQ  A TSIAELD QRNG+TLI FNH+Q   + S
Sbjct: 46  RLRSRSVRASNP-SVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQQ--MTS 105

Query: 134 SGSEALDSKAADLHGRVRLNHI--VARSIIHTSSEPIGIHQILAQVGSVEDSNCNCKPEN 193
           SGSE LD KA  L GRVRL+HI  +ARS        IGIHQ++    S+E+SN NCK E+
Sbjct: 106 SGSETLDPKAEILQGRVRLSHIRRLARS--------IGIHQMM---DSMEESNGNCKSED 165

Query: 194 HSCNLSDMQIGENDSSRSPKVLRLNRVKHLVRMMNSSVNPSPDPQ---HQTSIAG 242
           HS         E D  RS K LRLNRVKHL R MNSS  PS  P    +QT+IAG
Sbjct: 166 HSL--------ECDPRRSSKALRLNRVKHLARKMNSSAKPSAVPDESLNQTAIAG 198

BLAST of Moc01g30170 vs. ExPASy TrEMBL
Match: A0A6J1IRH4 (uncharacterized protein LOC111478702 OS=Cucurbita maxima OX=3661 GN=LOC111478702 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.4e-27
Identity = 90/157 (57.32%), Postives = 104/157 (66.24%), Query Frame = 0

Query: 91  PFEMAETNSHQ--AHTSIAELDQQRNGLTLIGFNHQQDAIVPSSGSEALDSKAADLHGRV 150
           P EMAETNS+Q  A TSIAELD QRNGLTLI FNH+Q   + SSGSE LD KA  L GRV
Sbjct: 62  PIEMAETNSNQTVAETSIAELDLQRNGLTLIDFNHEQQ--LTSSGSETLDPKAEILQGRV 121

Query: 151 RLNHI--VARSIIHTSSEPIGIHQILAQVGSVEDSNCNCKPENHSCNLSDMQIGENDSSR 210
           RL+HI  +ARS        IGIHQ++    S+E+S  NCK E+HS         E D  R
Sbjct: 122 RLSHIRRLARS--------IGIHQMM---DSMEESTGNCKSEDHSL--------ECDPRR 181

Query: 211 SPKVLRLNRVKHLVRMMNSSVNPS--PDPQHQTSIAG 242
           S K LRLNRVKHL R +NSSV PS   + Q+QT+IAG
Sbjct: 182 SSKALRLNRVKHLARKINSSVKPSAADESQNQTAIAG 197

BLAST of Moc01g30170 vs. ExPASy TrEMBL
Match: A0A5D3CM44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005900 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.7e-20
Identity = 78/155 (50.32%), Postives = 93/155 (60.00%), Query Frame = 0

Query: 97  TNSHQA--HTSIAELDQQRNGLTLIGFNHQQDAIVP----SSGSEALDSKAADLHGRVRL 156
           TNS +A   TSIAELD Q+NG+ L+GFNH+Q+++ P    SS SE LD +A  L GRVRL
Sbjct: 62  TNSFKAISGTSIAELDLQQNGIMLVGFNHEQESLNPDSITSSSSETLDPRAEILQGRVRL 121

Query: 157 NHI--VARSIIHTSSEPIGIHQILAQVGSVEDSNCNCKPENHSCNLSDMQIGENDSSRSP 216
           +HI  +ARS        IGIHQ+ +QVG    SNC  K  N           E D SR  
Sbjct: 122 SHIRRLARS--------IGIHQMFSQVGLESTSNCKSKDSNL----------EYDLSRPS 181

Query: 217 KVLRLNRVKHLVRMMNSSVNPSPD--PQHQTSIAG 242
           K LR   VK L RMMNSSV PS +   QHQT+IAG
Sbjct: 182 KSLR--HVKRLARMMNSSVKPSANESSQHQTTIAG 196

BLAST of Moc01g30170 vs. ExPASy TrEMBL
Match: A0A0A0KHQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511630 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-20
Identity = 78/155 (50.32%), Postives = 97/155 (62.58%), Query Frame = 0

Query: 97  TNSHQA--HTSIAELDQQRNGLTLIGFNHQQDAIVP----SSGSEALDSKAADLHGRVRL 156
           TNS +A   TSIAELD Q+NGL L+GFNH+Q+++ P    SS SE LD +A  L GRVRL
Sbjct: 113 TNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVRL 172

Query: 157 NHI--VARSIIHTSSEPIGIHQILAQVGSVEDSNCNCKPENHSCNLSDMQIGENDSSRSP 216
           +HI  +ARS        IGIHQ+ +QV    +S  NCK E+     S ++   N SSRS 
Sbjct: 173 SHIRRLARS--------IGIHQMFSQV----ESTSNCKSED-----SSLEYDLNRSSRS- 232

Query: 217 KVLRLNRVKHLVRMMNSSVNPSPD--PQHQTSIAG 242
               L RVK L RMMNSS+ PS D   QH+T+IAG
Sbjct: 233 ----LRRVKRLARMMNSSLKPSADESSQHKTTIAG 245

BLAST of Moc01g30170 vs. ExPASy TrEMBL
Match: A0A1S3B0B1 (uncharacterized protein LOC103484665 OS=Cucumis melo OX=3656 GN=LOC103484665 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.4e-19
Identity = 87/185 (47.03%), Postives = 104/185 (56.22%), Query Frame = 0

Query: 67  APRKTPTKLSTTKTQISKPENKDPPFEMAETNSHQA--HTSIAELDQQRNGLTLIGFNHQ 126
           A R+   +L   K Q  K  N  P F  + TNS +A   TSIAELD Q+NG+ L+GFNH+
Sbjct: 36  ARRRRNYQLRRLKYQNVKTTN--PSF--SGTNSFKAISETSIAELDLQQNGIMLVGFNHE 95

Query: 127 QDAIVP----SSGSEALDSKAADLHGRVRLNHI--VARSIIHTSSEPIGIHQILAQVGSV 186
           Q+++ P    SS SE LD +A  L GRVRL+HI  +ARS        IGIHQ+ +QVG  
Sbjct: 96  QESLNPDSITSSSSETLDPRAEILQGRVRLSHIRRLARS--------IGIHQMFSQVGLE 155

Query: 187 EDSNCNCKPENHSCNLSDMQIGENDSSRSPKVLRLNRVKHLVRMMNSSVNPSPD--PQHQ 242
             SNC  K  N           E D SR  K LR   VK L RMMNSSV PS +   QHQ
Sbjct: 156 STSNCKSKDSNL----------EYDLSRPSKSLR--HVKRLARMMNSSVKPSANESSQHQ 196

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022949888.19.8e-2853.71uncharacterized protein LOC111453147 [Cucurbita moschata] >KAG6603823.1 hypothet... [more]
KAG7034004.11.3e-2753.71hypothetical protein SDJN02_03730, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022978880.12.9e-2757.32uncharacterized protein LOC111478702 [Cucurbita maxima] >XP_022978881.1 uncharac... [more]
XP_023543050.14.9e-2756.33uncharacterized protein LOC111803033 [Cucurbita pepo subsp. pepo][more]
XP_038881721.11.9e-2655.78uncharacterized protein LOC120073145 isoform X1 [Benincasa hispida] >XP_03888172... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GDC84.8e-2853.71uncharacterized protein LOC111453147 OS=Cucurbita moschata OX=3662 GN=LOC1114531... [more]
A0A6J1IRH41.4e-2757.32uncharacterized protein LOC111478702 OS=Cucurbita maxima OX=3661 GN=LOC111478702... [more]
A0A5D3CM443.7e-2050.32Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KHQ04.8e-2050.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511630 PE=4 SV=1[more]
A0A1S3B0B12.4e-1947.03uncharacterized protein LOC103484665 OS=Cucumis melo OX=3656 GN=LOC103484665 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc01g30170.1Moc01g30170.1mRNA