Moc01g29670 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g29670
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RWP-RK domain-containing protein
Location	chr1: 21022144 .. 21022931 (-)
RNA-Seq Expression	Moc01g29670
Synteny	Moc01g29670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGCAGTTCAAATGAAGAATGCCCATCTTGCCTCAACAATGGCAAATTTCATCAACCAAGAAATTTGCCTCTACTTGAGCAGGACCTTAACTTCCTTCCTTGTTCAGCTGCTGCATCTGAAGGATCTGAGAATCAAATGAAAGAATCCTATGAACCAGGTTTAAGTTCCACACACTCTCTAAACAGGAGAGAATTTTGAACTTCTTATGGCACAAATAGAATTCATATCAGGAGATCATGTGTGCTCTCTTATGAAAGTTACTAAACAGGTGGGGAATTGCTGGTAATTGCAGAAAAGAAAAAAAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAATACTTCGATCTTCCAATTACAGAAGCTTCAAGAAACCTGAATGTTGGGTTGACAGTACTGAAAAGGAAATGCAGAGAATTCGGGATTCATCGCTGGCCACACAGGAAGATCAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGTTACCTTTTCTTCCTACTTTGTAGCTTAACACTTTACTGCAACCTAGAAAGGCACATTGTTTATGGAAAAGGGTGTTTGTAGGAAGAAGCAAAGCATAGAGAGGAAGATCACAAAGCTTTGATGGCAGTAACAAAGAGGCAAAGGATGTTGCAGAGTGAAAGAGAGAGCATAGAGATGACACCATTCAGAGAGCTAGAGACTGAGACCAGGAGATTTAGGCAAGATGTTTTCAGGAGAAGACATAAAGCTAGAGCTCTAGAAAGTCAGGGCACATCAGTTTAG

mRNA sequence

ATGAGCAGCAGTTCAAATGAAGAATGCCCATCTTGCCTCAACAATGGCAAATTTCATCAACCAAGAAATTTGCCTCTACTTGAGCAGGACCTTAACTTCCTTCCTTGTTCAGCTGCTGCATCTGAAGGATCTGAGAATCAAATGAAAGAATCCTATGAACCAGAAAAGAAAAAAAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAATACTTCGATCTTCCAATTACAGAAGCTTCAAGAAACCTGAATGTTGGGTTGACAGTACTGAAAAGGAAATGCAGAGAATTCGGGATTCATCGCTGGCCACACAGGAAGATCAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGAAGAAGCAAAGCATAGAGAGGAAGATCACAAAGCTTTGATGGCAGTAACAAAGAGGCAAAGGATGTTGCAGAGTGAAAGAGAGAGCATAGAGATGACACCATTCAGAGAGCTAGAGACTGAGACCAGGAGATTTAGGCAAGATGTTTTCAGGAGAAGACATAAAGCTAGAGCTCTAGAAAGTCAGGGCACATCAGTTTAG

Coding sequence (CDS)

ATGAGCAGCAGTTCAAATGAAGAATGCCCATCTTGCCTCAACAATGGCAAATTTCATCAACCAAGAAATTTGCCTCTACTTGAGCAGGACCTTAACTTCCTTCCTTGTTCAGCTGCTGCATCTGAAGGATCTGAGAATCAAATGAAAGAATCCTATGAACCAGAAAAGAAAAAAAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAATACTTCGATCTTCCAATTACAGAAGCTTCAAGAAACCTGAATGTTGGGTTGACAGTACTGAAAAGGAAATGCAGAGAATTCGGGATTCATCGCTGGCCACACAGGAAGATCAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGAAGAAGCAAAGCATAGAGAGGAAGATCACAAAGCTTTGATGGCAGTAACAAAGAGGCAAAGGATGTTGCAGAGTGAAAGAGAGAGCATAGAGATGACACCATTCAGAGAGCTAGAGACTGAGACCAGGAGATTTAGGCAAGATGTTTTCAGGAGAAGACATAAAGCTAGAGCTCTAGAAAGTCAGGGCACATCAGTTTAG

Protein sequence

MSSSSNEECPSCLNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPEKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGTSV

Homology

[Close]

BLAST of Moc01g29670 vs. NCBI nr
Match: XP_022132648.1 (protein RKD5 [Momordica charantia])

HSP 1 Score: 365.5 bits (937), Expect = 2.7e-97
Identity = 189/197 (95.94%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 1   MSSSSNEECPSCLNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEP------ 60
           MSSSSNEECPSCLNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEP      
Sbjct: 1   MSSSSNEECPSCLNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLV 60

Query: 61  --EKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 120
             EKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI
Sbjct: 61  IAEKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 120

Query: 121 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDV 180
           KSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDV
Sbjct: 121 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDV 180

Query: 181 FRRRHKARALESQGTSV 190
           FRRRHKARALESQGTSV
Sbjct: 181 FRRRHKARALESQGTSV 197

[Close]

BLAST of Moc01g29670 vs. NCBI nr
Match: XP_038882834.1 (protein RKD5 isoform X2 [Benincasa hispida])

HSP 1 Score: 297.7 bits (761), Expect = 6.9e-77
Identity = 153/180 (85.00%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 13  LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEP---EKKKRATSEHIAGIT 72
           L N KFHQPRNLPLL+QDLNFLPCS A S+GSE++MKE  EP    KK+RATSEHIAGIT
Sbjct: 17  LKNSKFHQPRNLPLLDQDLNFLPCSVAVSKGSESEMKEFCEPVIAAKKRRATSEHIAGIT 76

Query: 73  LSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHR 132
           LSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHR
Sbjct: 77  LSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHR 136

Query: 133 EEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGTSV 190
           E+DHKALMAVTKRQ MLQ+ERESIE TPFRELE ET+RFRQDVFRR+HKARALESQ +SV
Sbjct: 137 EDDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRKHKARALESQSSSV 196

[Close]

BLAST of Moc01g29670 vs. NCBI nr
Match: XP_038882831.1 (protein RKD5 isoform X1 [Benincasa hispida] >XP_038882832.1 protein RKD5 isoform X1 [Benincasa hispida] >XP_038882833.1 protein RKD5 isoform X1 [Benincasa hispida])

HSP 1 Score: 295.8 bits (756), Expect = 2.6e-76
Identity = 153/185 (82.70%), Postives = 164/185 (88.65%), Query Frame = 0


Query: 13  LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEP--------EKKKRATSEH 72
           L N KFHQPRNLPLL+QDLNFLPCS A S+GSE++MKE  EP         KK+RATSEH
Sbjct: 17  LKNSKFHQPRNLPLLDQDLNFLPCSVAVSKGSESEMKEFCEPGGELPVIAAKKRRATSEH 76

Query: 73  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 132
           IAGITLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE
Sbjct: 77  IAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 136

Query: 133 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 190
           EAKHRE+DHKALMAVTKRQ MLQ+ERESIE TPFRELE ET+RFRQDVFRR+HKARALES
Sbjct: 137 EAKHREDDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRKHKARALES 196

[Close]

BLAST of Moc01g29670 vs. NCBI nr
Match: XP_016899254.1 (PREDICTED: protein RKD5 [Cucumis melo] >KAA0025608.1 protein RKD5 [Cucumis melo var. makuwa] >TYK12483.1 protein RKD5 [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 9.9e-76
Identity = 152/181 (83.98%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 13  LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYE----PEKKKRATSEHIAGI 72
           L NGK HQPRNLPLL+QDLNFLPCS + S+GS NQM+ES +     EKK+RATSEHIAGI
Sbjct: 17  LKNGKSHQPRNLPLLDQDLNFLPCSVSVSKGSGNQMEESCDESGIAEKKRRATSEHIAGI 76

Query: 73  TLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKH 132
           TLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKH
Sbjct: 77  TLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKH 136

Query: 133 REEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGTS 190
           REEDHKALMAVTKRQ MLQ+ERE IE TPFRELE+ET+RFRQDVFRR+HKARALESQ  S
Sbjct: 137 REEDHKALMAVTKRQMMLQNERERIERTPFRELESETKRFRQDVFRRKHKARALESQSPS 196

[Close]

BLAST of Moc01g29670 vs. NCBI nr
Match: XP_004134999.1 (protein RKD5 isoform X2 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 1.6e-73
Identity = 150/180 (83.33%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 13  LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEP---EKKKRATSEHIAGIT 72
           L NGK HQPRNLPLL+QDLNFLPCS + S+ S NQM+ES      EKK+RATSEHIA IT
Sbjct: 17  LKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGIVEKKRRATSEHIARIT 76

Query: 73  LSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHR 132
           LSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHR
Sbjct: 77  LSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHR 136

Query: 133 EEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGTSV 190
           EEDHKALMAVTKRQ MLQ+ERE IE TPFRELE ET+RFRQDVFRR+HKARALESQ  SV
Sbjct: 137 EEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKHKARALESQSPSV 196

[Close]

BLAST of Moc01g29670 vs. ExPASy Swiss-Prot
Match: O81791 (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.6e-39
Identity = 101/205 (49.27%), Postives = 131/205 (63.90%), Query Frame = 0


Query: 7   EECPSCLN---NGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPE-------- 66
           E+C S      N    +PR L +L+QDLN LP S   SE S N+  E  E E        
Sbjct: 162 EQCSSSTEGYYNSDLPKPRKL-VLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSE 221

Query: 67  ---------KKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHR 126
                    KKKR  S H+A ++L +L+KYFDL I EASRNL VGLTVLK+KCREFGI R
Sbjct: 222 SDAKTEILKKKKRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPR 281

Query: 127 WPHRKIKSIDGLIRDLQEEA-KHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETET 186
           WPHRKIKS+D LI DLQ EA K +E++  A MAV K+Q  L++E+ +I   PF E+  ET
Sbjct: 282 WPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIET 341

Query: 187 RRFRQDVFRRRHKA-RALESQGTSV 190
           ++FRQ+ F++RH+A RA ++Q + V
Sbjct: 342 KKFRQENFKKRHRASRAKKNQESLV 365

[Close]

BLAST of Moc01g29670 vs. ExPASy Swiss-Prot
Match: Q9M9U9 (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17
Identity = 58/180 (32.22%), Postives = 96/180 (53.33%), Query Frame = 0


Query: 24  LPLLEQDLNFLPCSAAASEGSENQM-------KESYEPEKKKRATSEHIAGITLS----- 83
           + ++  + + L    +AS  +E  M       K      KK+R   E  +  ++S     
Sbjct: 71  ISIVSHEADILSVYGSASWTAEETMFVSDFAKKSETTTTKKRRCREECFSSCSVSKTLSK 130

Query: 84  -DLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE-EAKHR 143
             ++ YF +PIT+A+R LN+GLT+LK++CRE GI RWPHRK+ S+  LI +++E E    
Sbjct: 131 ETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEG 190

Query: 144 EEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGTSV 190
           EE+   L    ++   L+ E+++IE  P  + E +T+R RQ  F+  HK +      T +
Sbjct: 191 EENEDKLRNALEK---LEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRKRRSGMSTPI 247

[Close]

BLAST of Moc01g29670 vs. ExPASy Swiss-Prot
Match: Q9LVU8 (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-17
Identity = 56/167 (33.53%), Postives = 95/167 (56.89%), Query Frame = 0


Query: 21  PRNLPLLEQDLNFLPCSAAAS------EGSENQMK-ESYEPEKKKRATSEHIAGITLSDL 80
           P ++ LL Q+  F   S+++S      +G  + +K E    +KK+    +    + +S++
Sbjct: 94  PSDIHLLTQEPYFSSDSSSSSPLAIQNDGLISNVKVEKVTVKKKRNLKKKRQDKLEMSEI 153

Query: 81  AKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDH 140
            ++FD PI +A++ LNVGLTVLK++CRE GI+RWPHRK+KS++ LI++L+          
Sbjct: 154 KQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKN--------- 213

Query: 141 KALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKAR 181
              + + +  + L+  R  IE  P  EL   T++ RQ  F+  +K R
Sbjct: 214 ---VGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRR 248

[Close]

BLAST of Moc01g29670 vs. ExPASy Swiss-Prot
Match: Q9CA66 (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 8.3e-17
Identity = 52/132 (39.39%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 61  TSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIR 120
           TS     ++   +++YF +PIT+A+  LNVGLT+LKR+CRE GI RWPHRK+ S++ LI 
Sbjct: 128 TSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLIS 187

Query: 121 DLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRH--- 180
           +++E  K   E++     +     ML+ E+ +IE  P  E + +T+R RQ  F+  H   
Sbjct: 188 NVKELQKMEGEENAE--KLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRK 247

Query: 181 KARALESQGTSV 190
           K R+L+S  + V
Sbjct: 248 KKRSLKSDQSQV 257

[Close]

BLAST of Moc01g29670 vs. ExPASy Swiss-Prot
Match: Q9FGD1 (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 54/149 (36.24%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 46  NQMKESYEPEK---KKRATSEHIAGITLSDLAK-YFDLPITEASRNLNVGLTVLKRKCRE 105
           N MKE    ++   K+R   + +      ++ K YF +PIT+A++ LN+G+T+LK++CRE
Sbjct: 133 NTMKEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRE 192

Query: 106 FGIHRWPHRKIKSIDGLI---RDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPF 165
            GI RWPHRK+ S++ LI   +DL    K R    K   A+     +L+ E++ IE  P 
Sbjct: 193 LGIPRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNAL----ELLEMEKKMIEEVPD 252

Query: 166 RELETETRRFRQDVFRRRHKARALESQGT 188
            E   +T+R RQ  F+ ++K R L S  +
Sbjct: 253 LEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]

BLAST of Moc01g29670 vs. ExPASy TrEMBL
Match: A0A6J1BWV1 (protein RKD5 OS=Momordica charantia OX=3673 GN=LOC111005457 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 189/197 (95.94%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 1   MSSSSNEECPSCLNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEP------ 60
           MSSSSNEECPSCLNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEP      
Sbjct: 1   MSSSSNEECPSCLNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLV 60

Query: 61  --EKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 120
             EKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI
Sbjct: 61  IAEKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKI 120

Query: 121 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDV 180
           KSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDV
Sbjct: 121 KSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDV 180

Query: 181 FRRRHKARALESQGTSV 190
           FRRRHKARALESQGTSV
Sbjct: 181 FRRRHKARALESQGTSV 197

[Close]

BLAST of Moc01g29670 vs. ExPASy TrEMBL
Match: A0A5A7SHH9 (Protein RKD5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00600 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.8e-76
Identity = 152/181 (83.98%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 13  LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYE----PEKKKRATSEHIAGI 72
           L NGK HQPRNLPLL+QDLNFLPCS + S+GS NQM+ES +     EKK+RATSEHIAGI
Sbjct: 17  LKNGKSHQPRNLPLLDQDLNFLPCSVSVSKGSGNQMEESCDESGIAEKKRRATSEHIAGI 76

Query: 73  TLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKH 132
           TLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKH
Sbjct: 77  TLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKH 136

Query: 133 REEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGTS 190
           REEDHKALMAVTKRQ MLQ+ERE IE TPFRELE+ET+RFRQDVFRR+HKARALESQ  S
Sbjct: 137 REEDHKALMAVTKRQMMLQNERERIERTPFRELESETKRFRQDVFRRKHKARALESQSPS 196

[Close]

BLAST of Moc01g29670 vs. ExPASy TrEMBL
Match: A0A1S4DTD9 (protein RKD5 OS=Cucumis melo OX=3656 GN=LOC103485193 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.8e-76
Identity = 152/181 (83.98%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 13  LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYE----PEKKKRATSEHIAGI 72
           L NGK HQPRNLPLL+QDLNFLPCS + S+GS NQM+ES +     EKK+RATSEHIAGI
Sbjct: 17  LKNGKSHQPRNLPLLDQDLNFLPCSVSVSKGSGNQMEESCDESGIAEKKRRATSEHIAGI 76

Query: 73  TLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKH 132
           TLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKH
Sbjct: 77  TLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKH 136

Query: 133 REEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGTS 190
           REEDHKALMAVTKRQ MLQ+ERE IE TPFRELE+ET+RFRQDVFRR+HKARALESQ  S
Sbjct: 137 REEDHKALMAVTKRQMMLQNERERIERTPFRELESETKRFRQDVFRRKHKARALESQSPS 196

[Close]

BLAST of Moc01g29670 vs. ExPASy TrEMBL
Match: A0A0A0KGY8 (RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509650 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.7e-74
Identity = 150/180 (83.33%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 13  LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEP---EKKKRATSEHIAGIT 72
           L NGK HQPRNLPLL+QDLNFLPCS + S+ S NQM+ES      EKK+RATSEHIA IT
Sbjct: 17  LKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGIVEKKRRATSEHIARIT 76

Query: 73  LSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHR 132
           LSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHR
Sbjct: 77  LSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHR 136

Query: 133 EEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGTSV 190
           EEDHKALMAVTKRQ MLQ+ERE IE TPFRELE ET+RFRQDVFRR+HKARALESQ  SV
Sbjct: 137 EEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKHKARALESQSPSV 196

[Close]

BLAST of Moc01g29670 vs. ExPASy TrEMBL
Match: A0A6J1GEC7 (protein RKD5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453407 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.9e-64
Identity = 142/182 (78.02%), Postives = 154/182 (84.62%), Query Frame = 0


Query: 9   CPSCLNNGKFHQPRNLPLLEQDLNFLPCSA--AASEGSE-NQMKESYEP---EKKKRATS 68
           C   LN+ KF        L QDLNFLPCS+  A S+G E +QMKE  EP   +KK+RATS
Sbjct: 24  CFPKLNDEKF--------LHQDLNFLPCSSSMAVSKGPEIHQMKELCEPVLAKKKRRATS 83

Query: 69  EHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDL 128
           EHIAGI LSDLAKYFD+PITEASR+LNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDL
Sbjct: 84  EHIAGIALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDL 143

Query: 129 QEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARAL 185
           QEEAKHREED KALMAVTKRQ MLQ+ERESIE TPFRELE+ET+RFRQDVF+RRHKARAL
Sbjct: 144 QEEAKHREEDQKALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKARAL 197

[Close]

BLAST of Moc01g29670 vs. TAIR 10
Match: AT4G35590.1 (RWP-RK domain-containing protein )

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-40
Identity = 101/205 (49.27%), Postives = 131/205 (63.90%), Query Frame = 0


Query: 7   EECPSCLN---NGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPE-------- 66
           E+C S      N    +PR L +L+QDLN LP S   SE S N+  E  E E        
Sbjct: 162 EQCSSSTEGYYNSDLPKPRKL-VLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSE 221

Query: 67  ---------KKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHR 126
                    KKKR  S H+A ++L +L+KYFDL I EASRNL VGLTVLK+KCREFGI R
Sbjct: 222 SDAKTEILKKKKRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPR 281

Query: 127 WPHRKIKSIDGLIRDLQEEA-KHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETET 186
           WPHRKIKS+D LI DLQ EA K +E++  A MAV K+Q  L++E+ +I   PF E+  ET
Sbjct: 282 WPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIET 341

Query: 187 RRFRQDVFRRRHKA-RALESQGTSV 190
           ++FRQ+ F++RH+A RA ++Q + V
Sbjct: 342 KKFRQENFKKRHRASRAKKNQESLV 365

[Close]

BLAST of Moc01g29670 vs. TAIR 10
Match: AT1G18790.1 (RWP-RK domain-containing protein )

HSP 1 Score: 91.3 bits (225), Expect = 9.1e-19
Identity = 58/180 (32.22%), Postives = 96/180 (53.33%), Query Frame = 0


Query: 24  LPLLEQDLNFLPCSAAASEGSENQM-------KESYEPEKKKRATSEHIAGITLS----- 83
           + ++  + + L    +AS  +E  M       K      KK+R   E  +  ++S     
Sbjct: 71  ISIVSHEADILSVYGSASWTAEETMFVSDFAKKSETTTTKKRRCREECFSSCSVSKTLSK 130

Query: 84  -DLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE-EAKHR 143
             ++ YF +PIT+A+R LN+GLT+LK++CRE GI RWPHRK+ S+  LI +++E E    
Sbjct: 131 ETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEG 190

Query: 144 EEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGTSV 190
           EE+   L    ++   L+ E+++IE  P  + E +T+R RQ  F+  HK +      T +
Sbjct: 191 EENEDKLRNALEK---LEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRKRRSGMSTPI 247

[Close]

BLAST of Moc01g29670 vs. TAIR 10
Match: AT5G53040.1 (RWP-RK domain-containing protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18
Identity = 56/167 (33.53%), Postives = 95/167 (56.89%), Query Frame = 0


Query: 21  PRNLPLLEQDLNFLPCSAAAS------EGSENQMK-ESYEPEKKKRATSEHIAGITLSDL 80
           P ++ LL Q+  F   S+++S      +G  + +K E    +KK+    +    + +S++
Sbjct: 94  PSDIHLLTQEPYFSSDSSSSSPLAIQNDGLISNVKVEKVTVKKKRNLKKKRQDKLEMSEI 153

Query: 81  AKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDH 140
            ++FD PI +A++ LNVGLTVLK++CRE GI+RWPHRK+KS++ LI++L+          
Sbjct: 154 KQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKN--------- 213

Query: 141 KALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKAR 181
              + + +  + L+  R  IE  P  EL   T++ RQ  F+  +K R
Sbjct: 214 ---VGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRR 248

[Close]

BLAST of Moc01g29670 vs. TAIR 10
Match: AT1G74480.1 (RWP-RK domain-containing protein )

HSP 1 Score: 88.6 bits (218), Expect = 5.9e-18
Identity = 52/132 (39.39%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 61  TSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIR 120
           TS     ++   +++YF +PIT+A+  LNVGLT+LKR+CRE GI RWPHRK+ S++ LI 
Sbjct: 128 TSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLIS 187

Query: 121 DLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRH--- 180
           +++E  K   E++     +     ML+ E+ +IE  P  E + +T+R RQ  F+  H   
Sbjct: 188 NVKELQKMEGEENAE--KLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRK 247

Query: 181 KARALESQGTSV 190
           K R+L+S  + V
Sbjct: 248 KKRSLKSDQSQV 257

[Close]

BLAST of Moc01g29670 vs. TAIR 10
Match: AT5G66990.1 (RWP-RK domain-containing protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-16
Identity = 54/149 (36.24%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 46  NQMKESYEPEK---KKRATSEHIAGITLSDLAK-YFDLPITEASRNLNVGLTVLKRKCRE 105
           N MKE    ++   K+R   + +      ++ K YF +PIT+A++ LN+G+T+LK++CRE
Sbjct: 133 NTMKEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRE 192

Query: 106 FGIHRWPHRKIKSIDGLI---RDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPF 165
            GI RWPHRK+ S++ LI   +DL    K R    K   A+     +L+ E++ IE  P 
Sbjct: 193 LGIPRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNAL----ELLEMEKKMIEEVPD 252

Query: 166 RELETETRRFRQDVFRRRHKARALESQGT 188
            E   +T+R RQ  F+ ++K R L S  +
Sbjct: 253 LEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

The following BLAST results are available for this feature:

BLAST of Moc01g29670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132648.1	2.7e-97	95.94	protein RKD5 [Momordica charantia]	[more]
XP_038882834.1	6.9e-77	85.00	protein RKD5 isoform X2 [Benincasa hispida]	[more]
XP_038882831.1	2.6e-76	82.70	protein RKD5 isoform X1 [Benincasa hispida] >XP_038882832.1 protein RKD5 isoform...	[more]
XP_016899254.1	9.9e-76	83.98	PREDICTED: protein RKD5 [Cucumis melo] >KAA0025608.1 protein RKD5 [Cucumis melo ...	[more]
XP_004134999.1	1.6e-73	83.33	protein RKD5 isoform X2 [Cucumis sativus]	[more]

BLAST of Moc01g29670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81791	1.6e-39	49.27	Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1	[more]
Q9M9U9	1.3e-17	32.22	Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1	[more]
Q9LVU8	2.2e-17	33.53	Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1	[more]
Q9CA66	8.3e-17	39.39	Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1	[more]
Q9FGD1	2.0e-15	36.24	Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1	[more]

BLAST of Moc01g29670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BWV1	1.3e-97	95.94	protein RKD5 OS=Momordica charantia OX=3673 GN=LOC111005457 PE=4 SV=1	[more]
A0A5A7SHH9	4.8e-76	83.98	Protein RKD5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00600 P...	[more]
A0A1S4DTD9	4.8e-76	83.98	protein RKD5 OS=Cucumis melo OX=3656 GN=LOC103485193 PE=4 SV=1	[more]
A0A0A0KGY8	7.7e-74	83.33	RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509650 PE=4...	[more]
A0A6J1GEC7	1.9e-64	78.02	protein RKD5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453407 PE=4 ...	[more]

BLAST of Moc01g29670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35590.1	1.1e-40	49.27	RWP-RK domain-containing protein	[more]
AT1G18790.1	9.1e-19	32.22	RWP-RK domain-containing protein	[more]
AT5G53040.1	1.6e-18	33.53	RWP-RK domain-containing protein	[more]
AT1G74480.1	5.9e-18	39.39	RWP-RK domain-containing protein	[more]
AT5G66990.1	1.5e-16	36.24	RWP-RK domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..63
None	No IPR available	PANTHER	PTHR46373:SF12	PROTEIN RKD5	coord: 26..185
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 68..115 e-value: 6.1E-23 score: 80.6
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 50..135 score: 18.814865
IPR044607	Transcription factor RKD-like	PANTHER	PTHR46373	PROTEIN RKD4	coord: 26..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g29670.1	Moc01g29670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity